Citrus Sinensis ID: 037111
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 964 | 2.2.26 [Sep-21-2011] | |||||||
| Q8VZG8 | 1045 | Probable LRR receptor-lik | yes | no | 0.970 | 0.895 | 0.482 | 0.0 | |
| Q9LP24 | 1120 | Probable leucine-rich rep | no | no | 0.896 | 0.771 | 0.496 | 0.0 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.982 | 0.860 | 0.358 | 1e-164 | |
| O49318 | 1124 | Probable leucine-rich rep | no | no | 0.905 | 0.776 | 0.383 | 1e-162 | |
| Q9LVP0 | 1102 | Probable leucine-rich rep | no | no | 0.939 | 0.822 | 0.353 | 1e-156 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.909 | 0.702 | 0.370 | 1e-152 | |
| Q9FIZ3 | 1252 | LRR receptor-like serine/ | no | no | 0.907 | 0.698 | 0.365 | 1e-149 | |
| Q9LHP4 | 1141 | Receptor-like protein kin | no | no | 0.937 | 0.792 | 0.346 | 1e-147 | |
| Q9SGP2 | 996 | Receptor-like protein kin | no | no | 0.906 | 0.877 | 0.358 | 1e-142 | |
| C0LGR3 | 1091 | Probable LRR receptor-lik | no | no | 0.948 | 0.837 | 0.337 | 1e-142 |
| >sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/1009 (48%), Positives = 672/1009 (66%), Gaps = 73/1009 (7%)
Query: 5 VASNSIEAARGLLKWKATLQNH-NNSLLPSWTLDPVNATNITTPCT-WSGISCNHAGRII 62
S ++E A LLKWK+T N ++S L SW ++P N ++ CT W G++C+ G II
Sbjct: 43 AVSATVEEANALLKWKSTFTNQTSSSKLSSW-VNP----NTSSFCTSWYGVACS-LGSII 96
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
+NLT+T ++GT + FPFS +L+++DL+ N+ G I G +KL++ +LS N G
Sbjct: 97 RLNLTNTGIEGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSKLEYFDLSINQLVG 156
Query: 123 KIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSL 181
+IP E+G L+NL+ LH+ N LNGSIP EIG L+ + +A+ N L GPIP S GNL+ L
Sbjct: 157 EIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLTKL 216
Query: 182 VGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241
V LYL+ NSL GSIPS IGNL NL L L +N+L G IPSSFG L+ +T L + NQLSG
Sbjct: 217 VNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSG 276
Query: 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLY------------------ 283
IP EIGN+ L LSL N+L G +PS+L N+ +L +LHLY
Sbjct: 277 EIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEMESM 336
Query: 284 ------------------------------DNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313
DNQLSG IP I N L L + N FTG
Sbjct: 337 IDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNNFTG 396
Query: 314 FLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNL 373
FLP IC+ G L+ ++ DN+F G +PK+LR+C SL RVR + N G+IS+ FG+YP L
Sbjct: 397 FLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFSGDISEAFGVYPTL 456
Query: 374 KLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVG 433
DLS N F+G+LS+NW +L ++ N+ITG IPPEI N TQL +LD SSN + G
Sbjct: 457 NFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNRITG 516
Query: 434 KVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKL 493
++P ++N+ ++ L LNGN+LSG IP + LLT+L YLDLS+NRFS IP + L +L
Sbjct: 517 ELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPRL 576
Query: 494 HYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSG 553
+Y+N+S N+ Q IP L KL QL LDLS+N L GEI + +L++LE+L+LSHNNLSG
Sbjct: 577 YYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSG 636
Query: 554 SIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVS---GLQPCK 610
IP +F++M L +D+S+N L GPIP AFR+AP +A +GNK LCG V+ GL+PC
Sbjct: 637 QIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLCGSVNTTQGLKPC- 695
Query: 611 ALKSYKHVHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALL 670
++ S K H+ +++ ++P++ A+ ++ G+F+C ++R K +E ++ + L
Sbjct: 696 SITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEEHTDSESGGET-L 754
Query: 671 SILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGET-- 728
SI +++GK+ Y+EII++ FD + IG GG+G VYKA+LP+ +AVKKL+ T +
Sbjct: 755 SIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAKLPNA-IMAVKKLNETTDSSIS 813
Query: 729 --THQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL-SSETATE 785
+ ++EFL+EI+ALT +RHRN+VK +GFCSH R++FLVYEY+ERGSL ++L + + A +
Sbjct: 814 NPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKK 873
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845
+DW KR+NV+KGVAHALSYMHH+ P IVHRD+SS N+LL +YEA +SDFGTAKLLKPD
Sbjct: 874 LDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPD 933
Query: 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905
SSNWS +AGTYGYVAPELAY MKVTEKCDVYSFGVL LEVIKG+HP DL+S+LS SS P
Sbjct: 934 SSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLS-SSPPD 992
Query: 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM 954
A + ++ + D RLP P E +++++ I++VAL C+ ++P+ RP M
Sbjct: 993 ATL--SLKSISDHRLPEPTPE--IKEEVLEILKVALLCLHSDPQARPTM 1037
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/892 (49%), Positives = 589/892 (66%), Gaps = 28/892 (3%)
Query: 83 FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVN 142
+L L L EN L G IP IGN+ + L LS N +G IPS +G L NL +L +F N
Sbjct: 245 LKNLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNKLTGSIPSSLGNLKNLTLLSLFQN 304
Query: 143 HLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGN 201
+L G IP ++G++ S+ +L L N L G IP S+GNL +L LYLY N L G IP +GN
Sbjct: 305 YLTGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIPPELGN 364
Query: 202 LSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQN 261
+ +++ L L N L G IPSSFG L+ LT L L N L+G IPQE+GN++ + +L LSQN
Sbjct: 365 MESMIDLQLNNNKLTGSIPSSFGNLKNLTYLYLYLNYLTGVIPQELGNMESMINLDLSQN 424
Query: 262 QLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQ 321
+L G+VP S N + LE L+L N LSG IP + N +L +L + N FTGF P+ +C+
Sbjct: 425 KLTGSVPDSFGNFTKLESLYLRVNHLSGAIPPGVANSSHLTTLILDTNNFTGFFPETVCK 484
Query: 322 SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYN 381
LQ S+ N+ G +PK+LR+C SL R R N+ G+I + FGIYP+L D S+N
Sbjct: 485 GRKLQNISLDYNHLEGPIPKSLRDCKSLIRARFLGNKFTGDIFEAFGIYPDLNFIDFSHN 544
Query: 382 KFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELAN 441
KF+GE+SSNW P+LG L ++ NNITG IP EI N TQL ELD S+N+L G++P + N
Sbjct: 545 KFHGEISSNWEKSPKLGALIMSNNNITGAIPTEIWNMTQLVELDLSTNNLFGELPEAIGN 604
Query: 442 LTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSN 501
LT+L+ L LNGNQLSG +P L LT+L LDLS+N FS IP LKLH +N+S N
Sbjct: 605 LTNLSRLRLNGNQLSGRVPAGLSFLTNLESLDLSSNNFSSEIPQTFDSFLKLHDMNLSRN 664
Query: 502 EFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFEN 561
+F IP +L KL QL++LDLSHN L GEIP ++ +L+SL+KL+LSHNNLSG IPT FE
Sbjct: 665 KFDGSIP-RLSKLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEG 723
Query: 562 MHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEV--SGLQPCKALKSYKHVH 619
M L ++DIS N+L+GP+P FR A +AL+ N GLC + L+PC+ LK K
Sbjct: 724 MIALTNVDISNNKLEGPLPDTPTFRKATADALEENIGLCSNIPKQRLKPCRELKKPK--- 780
Query: 620 RKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQAL----LSILTY 675
+ V++ ++P+L L ++ F R++K +N RN +SI +
Sbjct: 781 KNGNLVVWILVPILGVLVILSICANTFTYCIRKRK-----LQNGRNTDPETGENMSIFSV 835
Query: 676 EGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTH----Q 731
+GK Y++II S N FD + IG GGY VY+A L +AVK+LH E +
Sbjct: 836 DGKFKYQDIIESTNEFDPTHLIGTGGYSKVYRANL-QDTIIAVKRLHDTIDEEISKPVVK 894
Query: 732 KEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSS-ETATEMDWSK 790
+EFL+E+KALT +RHRN+VK +GFCSH RH+FL+YEY+E+GSL ++L++ E A + W+K
Sbjct: 895 QEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLANDEEAKRLTWTK 954
Query: 791 RVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850
R+NV+KGVAHALSYMHH+ PIVHRD+SS N+LLD +Y A +SDFGTAKLLK DSSNWS
Sbjct: 955 RINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWS 1014
Query: 851 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910
+AGTYGYVAPE AYTMKVTEKCDVYSFGVL LE+I G+HP DL+SSLS S PG +
Sbjct: 1015 AVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSS--PGEAL-- 1070
Query: 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
++ + D R+ P + +KL ++E+AL C+ ANPE RP M + S
Sbjct: 1071 SLRSISDERVLEPRGQ--NREKLLKMVEMALLCLQANPESRPTMLSISTTFS 1120
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 580 bits (1494), Expect = e-164, Method: Compositional matrix adjust.
Identities = 385/1073 (35%), Positives = 542/1073 (50%), Gaps = 126/1073 (11%)
Query: 1 FSLNVASNSIEAARGLLKWKATLQNHNNSLLPSWT-LDPVNATNITTPCTWSGISCNHAG 59
FS + + E R LL++KA L N +N L SW LD + PC W+GI+C H
Sbjct: 16 FSFILVRSLNEEGRVLLEFKAFL-NDSNGYLASWNQLD-------SNPCNWTGIACTHLR 67
Query: 60 RIIS------------------------INLTSTSLKGTLDQFPFSLFSHLSYLDLN--- 92
+ S +N+++ + G + Q SL L LDL
Sbjct: 68 TVTSVDLNGMNLSGTLSPLICKLHGLRKLNVSTNFISGPIPQ-DLSLCRSLEVLDLCTNR 126
Query: 93 ---------------------ENQLYGNIPSPIGNLTKLKFLNLSSNH------------ 119
EN L+G+IP IGNL+ L+ L + SN+
Sbjct: 127 FHGVIPIQLTMIITLKKLYLCENYLFGSIPRQIGNLSSLQELVIYSNNLTGVIPPSMAKL 186
Query: 120 ------------FSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE----------------- 150
FSG IPSEI +L+VL + N L GS+P+
Sbjct: 187 RQLRIIRAGRNGFSGVIPSEISGCESLKVLGLAENLLEGSLPKQLEKLQNLTDLILWQNR 246
Query: 151 --------IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNL 202
+G++S L+ LAL N+ G IP IG L+ + LYLY N L G IP IGNL
Sbjct: 247 LSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNL 306
Query: 203 SNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQ 262
+ + +N L G IP FG++ L L L N L G IP+E+G L LL L LS N+
Sbjct: 307 IDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLSINR 366
Query: 263 LRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS 322
L GT+P L L L L L+DNQL G IP IG + N + L + N +G +P + C+
Sbjct: 367 LNGTIPQELQFLPYLVDLQLFDNQLEGKIPPLIGFYSNFSVLDMSANSLSGPIPAHFCRF 426
Query: 323 GSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNK 382
+L S+ N G++P+ L+ C SL ++ L NQL G++ + NL +L N
Sbjct: 427 QTLILLSLGSNKLSGNIPRDLKTCKSLTKLMLGDNQLTGSLPIELFNLQNLTALELHQNW 486
Query: 383 FYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANL 442
G +S++ L L++A NN TG IPPEIGN T++ + SSN L G +P EL +
Sbjct: 487 LSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSC 546
Query: 443 TSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNE 502
++ L L+GN+ SG I ELG L L L LS NR + IP + G L +L L + N
Sbjct: 547 VTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNL 606
Query: 503 FSQEIPIQLGKLVQLS-ELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFEN 561
S+ IP++LGKL L L++SHN L G IP + NL+ LE L L+ N LSG IP + N
Sbjct: 607 LSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPASIGN 666
Query: 562 MHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPCKALKSYKHVHRK 621
+ LL +IS N L G +P F+ GN GLC S C+ L +
Sbjct: 667 LMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGNHGLCN--SQRSHCQPLVPHSDSKLN 724
Query: 622 W------RTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALLSILTY 675
W R + T+ ++ +I +G+ +RR+ E+ + + + S
Sbjct: 725 WLINGSQRQKILTITCIVIGSVFLITFLGLCWTIKRREPAFVALEDQTKPD-VMDSYYFP 783
Query: 676 EGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFL 735
+ Y+ ++ + NF E +GRG G+VYKAE+ G+ +AVKKL+S + F
Sbjct: 784 KKGFTYQGLVDATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNSRGEGASSDNSFR 843
Query: 736 SEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILS-SETATEMDWSKRVNV 794
+EI L +RHRNIVK YGFC H + L+YEY+ +GSL L E +DW+ R +
Sbjct: 844 AEISTLGKIRHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRI 903
Query: 795 IKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD-SSNWSELA 853
G A L Y+HH+CRP IVHRD+ S N+LLD ++AHV DFG AKL+ S + S +A
Sbjct: 904 ALGAAEGLCYLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLAKLIDLSYSKSMSAVA 963
Query: 854 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD----SSLPGANMN 909
G+YGY+APE AYTMKVTEKCD+YSFGV+ LE+I G+ P L D NM
Sbjct: 964 GSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMI 1023
Query: 910 EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
I+ MFDARL + ++ ++++AL C +P RP M+ V +++
Sbjct: 1024 PTIE-MFDARLDTN--DKRTVHEMSLVLKIALFCTSNSPASRPTMREVVAMIT 1073
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 574 bits (1479), Expect = e-162, Method: Compositional matrix adjust.
Identities = 346/902 (38%), Positives = 499/902 (55%), Gaps = 29/902 (3%)
Query: 83 FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVN 142
+ L+ +N GNIP+ IG LK L L+ N SG++P EIG+L L+ + ++ N
Sbjct: 204 LNKLTTFRAGQNDFSGNIPTEIGKCLNLKLLGLAQNFISGELPKEIGMLVKLQEVILWQN 263
Query: 143 HLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGN 201
+G IP +IG+L+SL+ LAL GN L GPIP IGN+ SL LYLY N L G+IP +G
Sbjct: 264 KFSGFIPKDIGNLTSLETLALYGNSLVGPIPSEIGNMKSLKKLYLYQNQLNGTIPKELGK 323
Query: 202 LSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQN 261
LS ++ + +N L G IP + +L L L N+L+G IP E+ L+ L L LS N
Sbjct: 324 LSKVMEIDFSENLLSGEIPVELSKISELRLLYLFQNKLTGIIPNELSKLRNLAKLDLSIN 383
Query: 262 QLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQ 321
L G +P NL+S+ L L+ N LSG IPQ +G + L + NQ +G +P ICQ
Sbjct: 384 SLTGPIPPGFQNLTSMRQLQLFHNSLSGVIPQGLGLYSPLWVVDFSENQLSGKIPPFICQ 443
Query: 322 SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYN 381
+L ++ N G++P + C SL ++R+ N+L G + NL +L N
Sbjct: 444 QSNLILLNLGSNRIFGNIPPGVLRCKSLLQLRVVGNRLTGQFPTELCKLVNLSAIELDQN 503
Query: 382 KFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELAN 441
+F G L C +L L +A N + +P EI + L + SSN L G +P E+AN
Sbjct: 504 RFSGPLPPEIGTCQKLQRLHLAANQFSSNLPNEISKLSNLVTFNVSSNSLTGPIPSEIAN 563
Query: 442 LTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSN 501
L L L+ N G +PPELG L L L LS NRFS +IP +G L L L M N
Sbjct: 564 CKMLQRLDLSRNSFIGSLPPELGSLHQLEILRLSENRFSGNIPFTIGNLTHLTELQMGGN 623
Query: 502 EFSQEIPIQLGKLVQLS-ELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFE 560
FS IP QLG L L ++LS+N GEIPPEI NL L L+L++N+LSG IPT FE
Sbjct: 624 LFSGSIPPQLGLLSSLQIAMNLSYNDFSGEIPPEIGNLHLLMYLSLNNNHLSGEIPTTFE 683
Query: 561 NMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPCK-ALKSYKHVH 619
N+ LL + SYN L G +P + F++ + + GNKGLCG L+ C + S+ H+
Sbjct: 684 NLSSLLGCNFSYNNLTGQLPHTQIFQNMTLTSFLGNKGLCG--GHLRSCDPSHSSWPHIS 741
Query: 620 -------RKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALLSI 672
R+ R ++ + L+I ++ F+ + ++ ++ +
Sbjct: 742 SLKAGSARRGRIIIIVSSVIGGISLLLIAIVVHFLRNPVEPTAPYVHDKEPFFQESDIYF 801
Query: 673 LTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLH-----SFTGE 727
+ E + ++I+ + F +S+ +GRG G+VYKA +PSG T+AVKKL +
Sbjct: 802 VPKE-RFTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNS 860
Query: 728 TTHQKEFLSEIKALTGVRHRNIVKFYGFCSH--ARHSFLVYEYLERGSLARILSSETATE 785
F +EI L +RHRNIV+ Y FC H + + L+YEY+ RGSL +L +
Sbjct: 861 NNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSHS 920
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK-P 844
MDW R + G A L+Y+HH+C+P I+HRD+ S N+L+D +EAHV DFG AK++ P
Sbjct: 921 MDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMP 980
Query: 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP 904
S + S +AG+YGY+APE AYTMKVTEKCD+YSFGV+ LE++ G+ P L D L
Sbjct: 981 LSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGD--LA 1038
Query: 905 GANMNEAIDHMFDARLPPPWLEVGVEDK-----LKSIIEVALSCVDANPERRPNMQIVCK 959
N DH + + P+L VED + ++ ++A+ C ++P RP M+ V
Sbjct: 1039 TWTRNHIRDHSLTSEILDPYL-TKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVL 1097
Query: 960 LL 961
+L
Sbjct: 1098 ML 1099
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LVP0|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 368/1040 (35%), Positives = 548/1040 (52%), Gaps = 134/1040 (12%)
Query: 42 TNITTPCTWSGISCNHAG---RIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYG 98
+N + PC W+G+ C++ ++S+NL+S L G L L HL LDL+ N L G
Sbjct: 53 SNDSVPCGWTGVMCSNYSSDPEVLSLNLSSMVLSGKLSPSIGGLV-HLKQLDLSYNGLSG 111
Query: 99 NIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSL 157
IP IGN + L+ L L++N F G+IP EIG L +LE L ++ N ++GS+P EIG+L SL
Sbjct: 112 KIPKEIGNCSSLEILKLNNNQFDGEIPVEIGKLVSLENLIIYNNRISGSLPVEIGNLLSL 171
Query: 158 KNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG 217
L N++ G +P SIGNL L N + GS+PS IG +LV L L +N L G
Sbjct: 172 SQLVTYSNNISGQLPRSIGNLKRLTSFRAGQNMISGSLPSEIGGCESLVMLGLAQNQLSG 231
Query: 218 PIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSL 277
+P G L+KL+++ L N+ SG IP+EI N L L+L +NQL G +P L +L SL
Sbjct: 232 ELPKEIGMLKKLSQVILWENEFSGFIPREISNCTSLETLALYKNQLVGPIPKELGDLQSL 291
Query: 278 EILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIG 337
E L+LY N L+G IP+EIGN + N TG +P + L+ + +N G
Sbjct: 292 EFLYLYRNGLNGTIPREIGNLSYAIEIDFSENALTGEIPLELGNIEGLELLYLFENQLTG 351
Query: 338 SLP---KTLRNCTSLE---------------------RVRLEKNQLIGNISDDFGIYPNL 373
++P TL+N + L+ ++L +N L G I G Y +L
Sbjct: 352 TIPVELSTLKNLSKLDLSINALTGPIPLGFQYLRGLFMLQLFQNSLSGTIPPKLGWYSDL 411
Query: 374 KLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVG 433
+ D+S N G + S + IL + NN++G IP I L +L + N+LVG
Sbjct: 412 WVLDMSDNHLSGRIPSYLCLHSNMIILNLGTNNLSGNIPTGITTCKTLVQLRLARNNLVG 471
Query: 434 K------------------------VPLELANLTSLNDLILNGNQLSGGIPPELGLLTDL 469
+ +P E+ N ++L L L N +G +P E+G+L+ L
Sbjct: 472 RFPSNLCKQVNVTAIELGQNRFRGSIPREVGNCSALQRLQLADNGFTGELPREIGMLSQL 531
Query: 470 GYLDLSANR------------------------FSKSIPGNMGYLLKLHYLNMSSNEFSQ 505
G L++S+N+ FS ++P +G L +L L +S+N S
Sbjct: 532 GTLNISSNKLTGEVPSEIFNCKMLQRLDMCCNNFSGTLPSEVGSLYQLELLKLSNNNLSG 591
Query: 506 EIPIQLGKLVQLSE-------------------------LDLSHNLLRGEIPPEICNLES 540
IP+ LG L +L+E L+LS+N L GEIPPE+ NL
Sbjct: 592 TIPVALGNLSRLTELQMGGNLFNGSIPRELGSLTGLQIALNLSYNKLTGEIPPELSNLVM 651
Query: 541 LEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLC 600
LE L L++NNLSG IP++F N+ LL + SYN L GPIP R+ + + GN+GLC
Sbjct: 652 LEFLLLNNNNLSGEIPSSFANLSSLLGYNFSYNSLTGPIP---LLRNISMSSFIGNEGLC 708
Query: 601 GEVSGLQPCKALKSYKHVHRKWRTVLFTVLPLLAALALIIG-----LIGMFVCSQRR--K 653
G L C + + + ++A A +IG LI + V RR +
Sbjct: 709 GPP--LNQCIQTQPFAPSQSTGKPGGMRSSKIIAITAAVIGGVSLMLIALIVYLMRRPVR 766
Query: 654 KDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSG 713
+ ++ + +L + +++++ + +NFDESF +GRG G+VYKA LP+G
Sbjct: 767 TVASSAQDGQPSEMSLDIYFPPKEGFTFQDLVAATDNFDESFVVGRGACGTVYKAVLPAG 826
Query: 714 DTVAVKKL---HSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLE 770
T+AVKKL H F +EI L +RHRNIVK +GFC+H + L+YEY+
Sbjct: 827 YTLAVKKLASNHEGGNNNNVDNSFRAEILTLGNIRHRNIVKLHGFCNHQGSNLLLYEYMP 886
Query: 771 RGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE 830
+GSL IL + + +DWSKR + G A L+Y+HH+C+P I HRD+ S N+LLD ++E
Sbjct: 887 KGSLGEIL-HDPSCNLDWSKRFKIALGAAQGLAYLHHDCKPRIFHRDIKSNNILLDDKFE 945
Query: 831 AHVSDFGTAKLLK-PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ 889
AHV DFG AK++ P S + S +AG+YGY+APE AYTMKVTEK D+YS+GV+ LE++ G+
Sbjct: 946 AHVGDFGLAKVIDMPHSKSMSAIAGSYGYIAPEYAYTMKVTEKSDIYSYGVVLLELLTGK 1005
Query: 890 HPKDLLSSLSD--SSLPGANMNEAIDH-MFDARLPPPWLEVGVEDK-----LKSIIEVAL 941
P + D + + +A+ + DARL +ED+ + +++++AL
Sbjct: 1006 APVQPIDQGGDVVNWVRSYIRRDALSSGVLDARLT-------LEDERIVSHMLTVLKIAL 1058
Query: 942 SCVDANPERRPNMQIVCKLL 961
C +P RP+M+ V +L
Sbjct: 1059 LCTSVSPVARPSMRQVVLML 1078
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 539 bits (1389), Expect = e-152, Method: Compositional matrix adjust.
Identities = 375/1013 (37%), Positives = 520/1013 (51%), Gaps = 136/1013 (13%)
Query: 64 INLTSTSLKGTLDQFPFSL--FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFS 121
+NL + SL G + P L S L YL L NQL G IP + +L L+ L+LS+N+ +
Sbjct: 244 LNLANNSLTG---EIPSQLGEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLDLSANNLT 300
Query: 122 GKIPSEIGLLTNLEVLHMFVNHLNGSIP--------------------------EIGHLS 155
G+IP E ++ L L + NHL+GS+P E+
Sbjct: 301 GEIPEEFWNMSQLLDLVLANNHLSGSLPKSICSNNTNLEQLVLSGTQLSGEIPVELSKCQ 360
Query: 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHL 215
SLK L L N L G IP ++ L L LYL+NN+L G++ SI NL+NL +L L N+L
Sbjct: 361 SLKQLDLSNNSLAGSIPEALFELVELTDLYLHNNTLEGTLSPSISNLTNLQWLVLYHNNL 420
Query: 216 RGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGN------------------------LK 251
G +P LRKL L L N+ SG IPQEIGN LK
Sbjct: 421 EGKLPKEISALRKLEVLFLYENRFSGEIPQEIGNCTSLKMIDMFGNHFEGEIPPSIGRLK 480
Query: 252 LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQF 311
L L L QN+L G +P+SL N L IL L DNQLSG IP G L L + N
Sbjct: 481 ELNLLHLRQNELVGGLPASLGNCHQLNILDLADNQLSGSIPSSFGFLKGLEQLMLYNNSL 540
Query: 312 TGFLPQN-----------------------ICQSGSLQYFSVHDNYFIGSLPKTLRNCTS 348
G LP + +C S S F V +N F +P L N +
Sbjct: 541 QGNLPDSLISLRNLTRINLSHNRLNGTIHPLCGSSSYLSFDVTNNGFEDEIPLELGNSQN 600
Query: 349 LERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT 408
L+R+RL KNQL G I G L L D+S N G + C +L + + N ++
Sbjct: 601 LDRLRLGKNQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFLS 660
Query: 409 GGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTD 468
G IPP +G +QL EL SSN V +P EL N T L L L+GN L+G IP E+G L
Sbjct: 661 GPIPPWLGKLSQLGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQEIGNLGA 720
Query: 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQL-SELDLSHNLL 527
L L+L N+FS S+P MG L KL+ L +S N + EIP+++G+L L S LDLS+N
Sbjct: 721 LNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSALDLSYNNF 780
Query: 528 RGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRH 587
G+IP I L LE L+LSHN L+G +P + +M L +++S+N L G + + F
Sbjct: 781 TGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGGKLK--KQFSR 838
Query: 588 APVEALQGNKGLCGEVSGLQPCKALKS-YKHVHRKWRT-VLFTVLPLLAALALIIGLIGM 645
P ++ GN GLCG S L C ++S K R+ V+ + + L A+ L+I +I +
Sbjct: 839 WPADSFLGNTGLCG--SPLSRCNRVRSNNKQQGLSARSVVIISAISALTAIGLMILVIAL 896
Query: 646 FVCSQRR---KK---DSQEQEENNRNNQALLSILTYEG----KLVYEEIIRSINNFDESF 695
F QR KK S ++ ++QA L G + +E+I+ + +N E F
Sbjct: 897 FF-KQRHDFFKKVGHGSTAYTSSSSSSQATHKPLFRNGASKSDIRWEDIMEATHNLSEEF 955
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG GG G VYKAEL +G+TVAVKK+ + + K F E+K L +RHR++VK G+
Sbjct: 956 MIGSGGSGKVYKAELENGETVAVKKIL-WKDDLMSNKSFSREVKTLGRIRHRHLVKLMGY 1014
Query: 756 CSHARH--SFLVYEYLERGSLARILSSETAT------EMDWSKRVNVIKGVAHALSYMHH 807
CS + L+YEY++ GS+ L + +DW R+ + G+A + Y+HH
Sbjct: 1015 CSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHH 1074
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK------PDSSNWSELAGTYGYVAP 861
+C PPIVHRD+ S NVLLD EAH+ DFG AK+L DS+ W A +YGY+AP
Sbjct: 1075 DCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTW--FACSYGYIAP 1132
Query: 862 ELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN------------ 909
E AY++K TEK DVYS G++ +E++ G+ P D S+ GA M+
Sbjct: 1133 EYAYSLKATEKSDVYSMGIVLMEIVTGKMPTD--------SVFGAEMDMVRWVETHLEVA 1184
Query: 910 -EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
A D + D +L P L ED ++E+AL C +P+ RP+ + C L
Sbjct: 1185 GSARDKLIDPKLKP--LLPFEEDAACQVLEIALQCTKTSPQERPSSRQACDSL 1235
|
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 529 bits (1362), Expect = e-149, Method: Compositional matrix adjust.
Identities = 335/917 (36%), Positives = 501/917 (54%), Gaps = 42/917 (4%)
Query: 66 LTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIP 125
L L G+L + S + L L L+E QL G IP+ I N LK L+LS+N +G+IP
Sbjct: 319 LAKNRLSGSLPKTICSNNTSLKQLFLSETQLSGEIPAEISNCQSLKLLDLSNNTLTGQIP 378
Query: 126 SEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGL 184
+ L L L++ N L G++ I +L++L+ L N+L+G +P IG L L +
Sbjct: 379 DSLFQLVELTNLYLNNNSLEGTLSSSISNLTNLQEFTLYHNNLEGKVPKEIGFLGKLEIM 438
Query: 185 YLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244
YLY N G +P IGN + L + N L G IPSS G L+ LT+L L N+L G+IP
Sbjct: 439 YLYENRFSGEMPVEIGNCTRLQEIDWYGNRLSGEIPSSIGRLKDLTRLHLRENELVGNIP 498
Query: 245 QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSL 304
+GN +T + L+ NQL G++PSS L++LE+ +Y+N L G++P + N NL +
Sbjct: 499 ASLGNCHQMTVIDLADNQLSGSIPSSFGFLTALELFMIYNNSLQGNLPDSLINLKNLTRI 558
Query: 305 SVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS 364
+ N+F G + +C S S F V +N F G +P L T+L+R+RL KNQ G I
Sbjct: 559 NFSSNKFNGSISP-LCGSSSYLSFDVTENGFEGDIPLELGKSTNLDRLRLGKNQFTGRIP 617
Query: 365 DDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHEL 424
FG L L D+S N G + C +L + + N ++G IP +G L EL
Sbjct: 618 RTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGEL 677
Query: 425 DFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIP 484
SSN VG +P E+ +LT++ L L+GN L+G IP E+G L L L+L N+ S +P
Sbjct: 678 KLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGPLP 737
Query: 485 GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQL-SELDLSHNLLRGEIPPEICNLESLEK 543
+G L KL L +S N + EIP+++G+L L S LDLS+N G IP I L LE
Sbjct: 738 STIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKLES 797
Query: 544 LNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEV 603
L+LSHN L G +P +M L +++SYN L+G + + F +A GN GLCG
Sbjct: 798 LDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLK--KQFSRWQADAFVGNAGLCG-- 853
Query: 604 SGLQPCKALKSYKHVHRKWRT-VLFTVLPLLAALALIIGLIGMF------VCSQRRKKDS 656
S L C S +T V+ + + LAA+AL++ +I +F + + R +S
Sbjct: 854 SPLSHCNRAGSKNQRSLSPKTVVIISAISSLAAIALMVLVIILFFKQNHDLFKKVRGGNS 913
Query: 657 QEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTV 716
++ + L S + + +++I+ + + +E F IG GG G VYKAEL +G+T+
Sbjct: 914 AFSSNSSSSQAPLFSNGGAKSDIKWDDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETI 973
Query: 717 AVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH--SFLVYEYLERGSL 774
AVKK+ + + K F E+K L +RHR++VK G+CS + L+YEY+ GS+
Sbjct: 974 AVKKIL-WKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSV 1032
Query: 775 ARILSSETATE----MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE 830
L + T+ + W R+ + G+A + Y+H++C PPIVHRD+ S NVLLD E
Sbjct: 1033 WDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIE 1092
Query: 831 AHVSDFGTAKLLKPDSSNWSE----LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 886
AH+ DFG AK+L + +E AG+YGY+APE AY++K TEK DVYS G++ +E++
Sbjct: 1093 AHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIV 1152
Query: 887 KGQHPKD-LLSSLSD---------SSLPGANMNEA-IDHMFDARLPPPWLEVGVEDKLKS 935
G+ P + + +D + PG+ E ID + LP E+
Sbjct: 1153 TGKMPTEAMFDEETDMVRWVETVLDTPPGSEAREKLIDSELKSLLPCE------EEAAYQ 1206
Query: 936 IIEVALSCVDANPERRP 952
++E+AL C + P+ RP
Sbjct: 1207 VLEIALQCTKSYPQERP 1223
|
Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 350/1009 (34%), Positives = 514/1009 (50%), Gaps = 105/1009 (10%)
Query: 46 TPCT-WSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPI 104
TPC W+ I+C+ G I I++ S L+ +L + F L L ++ L G +P +
Sbjct: 67 TPCNNWTFITCSSQGFITDIDIESVPLQLSLPK-NLPAFRSLQKLTISGANLTGTLPESL 125
Query: 105 GNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALD 163
G+ LK L+LSSN G IP + L NLE L + N L G IP +I S LK+L L
Sbjct: 126 GDCLGLKVLDLSSNGLVGDIPWSLSKLRNLETLILNSNQLTGKIPPDISKCSKLKSLILF 185
Query: 164 GNHLDGPIPVSIGNLSSLVGLYLY-NNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSS 222
N L G IP +G LS L + + N + G IPS IG+ SNL L L + + G +PSS
Sbjct: 186 DNLLTGSIPTELGKLSGLEVIRIGGNKEISGQIPSEIGDCSNLTVLGLAETSVSGNLPSS 245
Query: 223 FGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHL 282
G L+KL L + +SG IP ++GN L DL L +N L G++P + L+ LE L L
Sbjct: 246 LGKLKKLETLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSGSIPREIGQLTKLEQLFL 305
Query: 283 YDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKT 342
+ N L G IP+EIGN NL + + N +G +P +I + L+ F + DN F GS+P T
Sbjct: 306 WQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPSSIGRLSFLEEFMISDNKFSGSIPTT 365
Query: 343 LRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLF------------------------DL 378
+ NC+SL +++L+KNQ+ G I + G L LF DL
Sbjct: 366 ISNCSSLVQLQLDKNQISGLIPSELGTLTKLTLFFAWSNQLEGSIPPGLADCTDLQALDL 425
Query: 379 SYNKFYGELSSNWW------------------------NCPQLGILKIAGNNITGGIPPE 414
S N G + S + NC L L++ N ITG IP
Sbjct: 426 SRNSLTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEIPSG 485
Query: 415 IGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDL 474
IG+ +++ LDFSSN L GKVP E+ + + L + L+ N L G +P + L+ L LD+
Sbjct: 486 IGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGLQVLDV 545
Query: 475 SANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPE 534
SAN+FS IP ++G L+ L+ L +S N FS IP LG L LDL N L GEIP E
Sbjct: 546 SANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSGEIPSE 605
Query: 535 ICNLESLE-KLNLSHNNLSGSIPTN-----------------------FENMHGLLSIDI 570
+ ++E+LE LNLS N L+G IP+ N+ L+S++I
Sbjct: 606 LGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEGDLAPLANIENLVSLNI 665
Query: 571 SYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSG-----LQPCKALKSYKHVHRKWRTV 625
SYN G +P + FR + L+GNK LC + L R +
Sbjct: 666 SYNSFSGYLPDNKLFRQLSPQDLEGNKKLCSSTQDSCFLTYRKGNGLGDDGDASRTRKLR 725
Query: 626 LFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALLSILTYEGKLVYEEII 685
L L + + L+I L + V RR D++ E + + + ++II
Sbjct: 726 LTLALLITLTVVLMI-LGAVAVIRARRNIDNERDSELGETYKWQFTPF-QKLNFSVDQII 783
Query: 686 RSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKE-------FLSEI 738
R + E IG+G G VY+A++ +G+ +AVKKL H ++ F +E+
Sbjct: 784 RCLV---EPNVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEV 840
Query: 739 KALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGV 798
K L +RH+NIV+F G C + L+Y+Y+ GSL +L + +DW R ++ G
Sbjct: 841 KTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSLDWDLRYRILLGA 900
Query: 799 AHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL-KPDSSNWS-ELAGTY 856
A L+Y+HH+C PPIVHRD+ + N+L+ ++E +++DFG AKL+ + D S +AG+Y
Sbjct: 901 AQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSY 960
Query: 857 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSS----LSDSSLPGANMNEAI 912
GY+APE Y+MK+TEK DVYS+GV+ LEV+ G+ P D L D E +
Sbjct: 961 GYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDWVRQNRGSLEVL 1020
Query: 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
D +R D++ ++ AL CV+++P+ RP M+ V +L
Sbjct: 1021 DSTLRSRTEAE------ADEMMQVLGTALLCVNSSPDERPTMKDVAAML 1063
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust.
Identities = 353/986 (35%), Positives = 518/986 (52%), Gaps = 112/986 (11%)
Query: 28 NSLLPSWTLDPVNATNITTPCTWSGISC-NHAGRIISINLTSTSLKGTLDQFP-----FS 81
+S L SW +N +PC WSG+SC + S++L+S +L G FP S
Sbjct: 34 DSYLSSWN------SNDASPCRWSGVSCAGDFSSVTSVDLSSANLAGP---FPSVICRLS 84
Query: 82 LFSHLSY---------------------LDLNENQLYGNIPSPIGNLTKLKFLNLSSNHF 120
+HLS LDL++N L G +P + ++ L L+L+ N+F
Sbjct: 85 NLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNF 144
Query: 121 SGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLD-GPIPVSIGNL 178
SG IP+ G NLEVL + N L+G+IP +G++S+LK L L N IP GNL
Sbjct: 145 SGDIPASFGKFENLEVLSLVYNLLDGTIPPFLGNISTLKMLNLSYNPFSPSRIPPEFGNL 204
Query: 179 SSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238
++L ++L L G IP S+G LS LV L L N L G IP S G L + ++EL NN
Sbjct: 205 TNLEVMWLTECHLVGQIPDSLGQLSKLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNS 264
Query: 239 LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF 298
L+G IP E+GNLK L L S NQL G +P L + LE L+LY+N L G +P I
Sbjct: 265 LTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCRVP-LESLNLYENNLEGELPASIALS 323
Query: 299 MNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQ 358
NL + + GN+ TG LP+++ + L++ V +N F G LP L LE + + N
Sbjct: 324 PNLYEIRIFGNRLTGGLPKDLGLNSPLRWLDVSENEFSGDLPADLCAKGELEELLIIHNS 383
Query: 359 LIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNA 418
G I + +L L+YN+F G + + +W P + +L++ N+ +G I IG A
Sbjct: 384 FSGVIPESLADCRSLTRIRLAYNRFSGSVPTGFWGLPHVNLLELVNNSFSGEISKSIGGA 443
Query: 419 TQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANR 478
+ L L S+N G +P E+ +L +LN L +GN+ SG +P L L +LG LDL N+
Sbjct: 444 SNLSLLILSNNEFTGSLPEEIGSLDNLNQLSASGNKFSGSLPDSLMSLGELGTLDLHGNQ 503
Query: 479 FSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNL 538
FS + + KL+ LN++ NEF+ +IP ++G L L+ LDLS N+ G+IP + +L
Sbjct: 504 FSGELTSGIKSWKKLNELNLADNEFTGKIPDEIGSLSVLNYLDLSGNMFSGKIPVSLQSL 563
Query: 539 ESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKG 598
+ L +LNLS+N LSG +P + L+ D+ N + GN G
Sbjct: 564 K-LNQLNLSYNRLSGDLPPS-------LAKDMYKN------------------SFIGNPG 597
Query: 599 LCGEVSGLQPCKALKSYKHVHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQE 658
LCG++ GL C + K W L + +LAA+ L+ G + F R K ++
Sbjct: 598 LCGDIKGL--CGSENEAKKRGYVW---LLRSIFVLAAMVLLAG-VAWFYFKYRTFKKARA 651
Query: 659 QEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAV 718
E R+ L+S ++ EI+ S+ DE IG G G VYK L +G+TVAV
Sbjct: 652 ME---RSKWTLMSF--HKLGFSEHEILESL---DEDNVIGAGASGKVYKVVLTNGETVAV 703
Query: 719 KKLHSF----TGETTHQK---------EFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765
K+L + TG+ +K F +E++ L +RH+NIVK + CS LV
Sbjct: 704 KRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLV 763
Query: 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL 825
YEY+ GSL +L S + W R +I A LSY+HH+ PPIVHRD+ S N+L+
Sbjct: 764 YEYMPNGSLGDLLHSSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILI 823
Query: 826 DFEYEAHVSDFGTAK---LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLA 882
D +Y A V+DFG AK L + S +AG+ GY+APE AYT++V EK D+YSFGV+
Sbjct: 824 DGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVI 883
Query: 883 LEVIKGQHP-------KDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKS 935
LE++ + P KDL+ + S+L + I+H+ D P L+ ++++
Sbjct: 884 LEIVTRKRPVDPELGEKDLVKWVC-STLD----QKGIEHVID-----PKLDSCFKEEISK 933
Query: 936 IIEVALSCVDANPERRPNMQIVCKLL 961
I+ V L C P RP+M+ V K+L
Sbjct: 934 ILNVGLLCTSPLPINRPSMRRVVKML 959
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGR3|Y4265_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust.
Identities = 355/1051 (33%), Positives = 521/1051 (49%), Gaps = 137/1051 (13%)
Query: 11 EAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTS 70
+ + LL WK+ L N + SW + T+PC W G+ CN G + I L
Sbjct: 27 QQGQALLSWKSQL-NISGDAFSSWHVAD------TSPCNWVGVKCNRRGEVSEIQLKGMD 79
Query: 71 LKGTLDQFPFSL------------------------FSHLSYLDLNENQLYGNIPSPIGN 106
L+G+L F+ L LDL++N L G+IP I
Sbjct: 80 LQGSLPVTSLRSLKSLTSLTLSSLNLTGVIPKEIGDFTELELLDLSDNSLSGDIPVEIFR 139
Query: 107 LTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGN 165
L KLK L+L++N+ G IP EIG L+ L L +F N L+G IP IG L +L+ L GN
Sbjct: 140 LKKLKTLSLNTNNLEGHIPMEIGNLSGLVELMLFDNKLSGEIPRSIGELKNLQVLRAGGN 199
Query: 166 -HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFG 224
+L G +P IGN +LV L L SL G +P+SIGNL + + + + L GPIP G
Sbjct: 200 KNLRGELPWEIGNCENLVMLGLAETSLSGKLPASIGNLKRVQTIAIYTSLLSGPIPDEIG 259
Query: 225 YLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYD 284
Y +L L L N +SGSIP IG LK L L L QN L G +P+ L N L ++ +
Sbjct: 260 YCTELQNLYLYQNSISGSIPTTIGGLKKLQSLLLWQNNLVGKIPTELGNCPELWLIDFSE 319
Query: 285 NQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLR 344
N L+G IP+ G NL L + NQ +G +P+ + L + + +N G +P +
Sbjct: 320 NLLTGTIPRSFGKLENLQELQLSVNQISGTIPEELTNCTKLTHLEIDNNLITGEIPSLMS 379
Query: 345 NCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW------------ 392
N SL +N+L GNI L+ DLSYN G + +
Sbjct: 380 NLRSLTMFFAWQNKLTGNIPQSLSQCRELQAIDLSYNSLSGSIPKEIFGLRNLTKLLLLS 439
Query: 393 ------------NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELA 440
NC L L++ GN + G IP EIGN L+ +D S N LVG +P ++
Sbjct: 440 NDLSGFIPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIPPAIS 499
Query: 441 NLTSLNDLILNGNQLSGGI-----------------------PPELGLLTDLGYLDLSAN 477
SL L L+ N LSG + PP +GLLT+L L+L+ N
Sbjct: 500 GCESLEFLDLHTNSLSGSLLGTTLPKSLKFIDFSDNALSSTLPPGIGLLTELTKLNLAKN 559
Query: 478 RFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS-ELDLSHNLLRGEIPPEIC 536
R S IP + L LN+ N+FS EIP +LG++ L+ L+LS N GEIP
Sbjct: 560 RLSGEIPREISTCRSLQLLNLGENDFSGEIPDELGQIPSLAISLNLSCNRFVGEIPSRFS 619
Query: 537 NLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGN 596
+L++L L++SHN L+G++ ++ L+S++ISYN+ G +P+ FR P+ L N
Sbjct: 620 DLKNLGVLDVSHNQLTGNLNV-LTDLQNLVSLNISYNDFSGDLPNTPFFRRLPLSDLASN 678
Query: 597 KGLCGEVSGLQPCKALKSYKHVHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDS 656
+GL A+ + + +V+ + +L + ++ L+ ++ + R
Sbjct: 679 RGL-------YISNAISTRPDPTTRNSSVVRLTILILVVVTAVLVLMAVYTLVRARAAGK 731
Query: 657 QEQEENNRNNQALLSILTYEGKLVYEEIIRSIN----NFDESFCIGRGGYGSVYKAELPS 712
Q E I ++E L Y+++ SI+ N + IG G G VY+ +PS
Sbjct: 732 QLLGE---------EIDSWEVTL-YQKLDFSIDDIVKNLTSANVIGTGSSGVVYRITIPS 781
Query: 713 GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772
G+++AVKK+ S F SEIK L +RHRNIV+ G+CS+ L Y+YL G
Sbjct: 782 GESLAVKKMWS----KEESGAFNSEIKTLGSIRHRNIVRLLGWCSNRNLKLLFYDYLPNG 837
Query: 773 SLA-RILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA 831
SL+ R+ + +DW R +V+ GVAHAL+Y+HH+C P I+H DV + NVLL +E
Sbjct: 838 SLSSRLHGAGKGGCVDWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEP 897
Query: 832 HVSDFGTAK-----------LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGV 880
+++DFG A+ L KP +N +AG+YGY+APE A ++TEK DVYS+GV
Sbjct: 898 YLADFGLARTISGYPNTGIDLAKP--TNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGV 955
Query: 881 LALEVIKGQHPKDLLSSLSDSSLPGAN--MNEAIDHMFDARLPPPWLEVGVEDKLKSI-- 936
+ LEV+ G+HP D LPG + DH+ + + P L+ ++ + SI
Sbjct: 956 VLLEVLTGKHPL-------DPDLPGGAHLVKWVRDHLAEKKDPSRLLDPRLDGRTDSIMH 1008
Query: 937 -----IEVALSCVDANPERRPNMQIVCKLLS 962
+ VA CV RP M+ V +L+
Sbjct: 1009 EMLQTLAVAFLCVSNKANERPLMKDVVAMLT 1039
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 964 | ||||||
| 225456159 | 1038 | PREDICTED: probable LRR receptor-like se | 0.987 | 0.917 | 0.563 | 0.0 | |
| 225456161 | 1037 | PREDICTED: probable LRR receptor-like se | 0.986 | 0.917 | 0.558 | 0.0 | |
| 147767326 | 1032 | hypothetical protein VITISV_008862 [Viti | 0.981 | 0.916 | 0.561 | 0.0 | |
| 359491509 | 1032 | PREDICTED: probable LRR receptor-like se | 0.981 | 0.916 | 0.559 | 0.0 | |
| 359491512 | 1078 | PREDICTED: probable LRR receptor-like se | 0.988 | 0.884 | 0.555 | 0.0 | |
| 255545702 | 1008 | receptor protein kinase, putative [Ricin | 0.989 | 0.946 | 0.545 | 0.0 | |
| 147772402 | 996 | hypothetical protein VITISV_022117 [Viti | 0.951 | 0.920 | 0.541 | 0.0 | |
| 7267528 | 1027 | receptor protein kinase-like protein [Ar | 0.970 | 0.911 | 0.483 | 0.0 | |
| 186511602 | 1045 | Leucine-rich repeat-containing protein [ | 0.970 | 0.895 | 0.482 | 0.0 | |
| 297813345 | 1019 | hypothetical protein ARALYDRAFT_489780 [ | 0.970 | 0.918 | 0.483 | 0.0 |
| >gi|225456159|ref|XP_002278561.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/1017 (56%), Positives = 711/1017 (69%), Gaps = 65/1017 (6%)
Query: 4 NVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATN-------ITTPCTWSGISCN 56
+V+S S E + LLKWKA+LQNHN+S L SW L P N+TN T+PC W GISCN
Sbjct: 26 HVSSYSNEETQALLKWKASLQNHNHSSLLSWDLYPNNSTNSSTHLGTATSPCKWYGISCN 85
Query: 57 HAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLS 116
HAG +I INLT + L GTL F FS F +L+Y+D++ N L G IP IG L +LK+L+LS
Sbjct: 86 HAGSVIKINLTESGLNGTLMDFSFSSFPNLAYVDISMNNLSGPIPPQIGLLFELKYLDLS 145
Query: 117 SNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSI 175
N FSG IPSEIGLLTNLEVLH+ N LNGSIP EIG L+SL LAL N L+G IP S+
Sbjct: 146 INQFSGGIPSEIGLLTNLEVLHLVQNQLNGSIPHEIGQLASLYELALYTNQLEGSIPASL 205
Query: 176 GNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235
GNLS+L LYLY N L GSIP +GNL+NLV ++ N+L GPIPS+FG L++LT L L
Sbjct: 206 GNLSNLASLYLYENQLSGSIPPEMGNLTNLVEIYSNNNNLTGPIPSTFGNLKRLTVLYLF 265
Query: 236 NN------------------------------------------------QLSGSIPQEI 247
NN QLSG IPQEI
Sbjct: 266 NNSLSGPIPPEIGNLKSLQELSLYENNLSGPIPVSLCDLSGLTLLHLYANQLSGPIPQEI 325
Query: 248 GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVG 307
GNLK L DL LS+NQL G++P+SL NL++LEIL L DNQLSG+IPQEIG L L +
Sbjct: 326 GNLKSLVDLELSENQLNGSIPTSLGNLTNLEILFLRDNQLSGYIPQEIGKLHKLVVLEID 385
Query: 308 GNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDF 367
NQ G LP+ ICQ+GSL F+V DN+ G +PK+L+NC +L R + N+L GNIS+
Sbjct: 386 TNQLFGSLPEGICQAGSLVRFAVSDNHLSGPIPKSLKNCRNLTRALFQGNRLTGNISEVV 445
Query: 368 GIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFS 427
G PNL+ DLSYN+F+GELS NW CPQL L+IAGNNITG IP + G +T L LD S
Sbjct: 446 GDCPNLEFIDLSYNRFHGELSHNWGRCPQLQRLEIAGNNITGSIPEDFGISTNLTLLDLS 505
Query: 428 SNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNM 487
SNHLVG++P ++ +LTSL LILN NQLSG IPPELG L+ L YLDLSANR + SIP ++
Sbjct: 506 SNHLVGEIPKKMGSLTSLLGLILNDNQLSGSIPPELGSLSHLEYLDLSANRLNGSIPEHL 565
Query: 488 GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS 547
G L LHYLN+S+N+ S IP+Q+GKL LS+LDLSHNLL G IPP+I L+SLE L+LS
Sbjct: 566 GDCLDLHYLNLSNNKLSHGIPVQMGKLSHLSQLDLSHNLLAGGIPPQIQGLQSLEMLDLS 625
Query: 548 HNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQ 607
HNNL G IP FE+M L +DISYN+L GPIP AFR+A +E L+GNK LCG V GLQ
Sbjct: 626 HNNLCGFIPKAFEDMPALSYVDISYNQLQGPIPHSNAFRNATIEVLKGNKDLCGNVKGLQ 685
Query: 608 PCKALKSYKH--VHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRN 665
PCK V + + V + PLL AL L+ IG+F+ ++RR++ + +E + +N
Sbjct: 686 PCKYGFGVDQQPVKKSHKVVFIIIFPLLGALVLLFAFIGIFLIAERRERTPEIEEGDVQN 745
Query: 666 NQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFT 725
+ L SI ++G+ +YEEII++ +FD +CIG+GG+GSVYKAELPS + VAVKKLH
Sbjct: 746 D--LFSISNFDGRTMYEEIIKATKDFDPMYCIGKGGHGSVYKAELPSSNIVAVKKLHPSD 803
Query: 726 GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATE 785
E +QK+FL+EI+ALT ++HRNIVK GFCSH RH FLVYEYLERGSLA ILS E A +
Sbjct: 804 TEMANQKDFLNEIRALTEIKHRNIVKLLGFCSHPRHKFLVYEYLERGSLATILSREEAKK 863
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845
+ W+ RVN+IKGVAHAL+YMHH+C PPIVHRDVSS N+LLD +YEAH+SDFGTAKLLK D
Sbjct: 864 LGWATRVNIIKGVAHALAYMHHDCSPPIVHRDVSSNNILLDSQYEAHISDFGTAKLLKLD 923
Query: 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905
SSN S LAGT+GY+APELAYTMKVTEK DV+SFGV+ALEVIKG+HP D + SLS S
Sbjct: 924 SSNQSILAGTFGYLAPELAYTMKVTEKTDVFSFGVIALEVIKGRHPGDQILSLSVSP--- 980
Query: 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
N A++ M D RLPP L E ++ +I++ A+ C+ ANP+ RP MQ V ++LS
Sbjct: 981 EKDNIALEDMLDPRLPP--LTPQDEGEVIAILKQAIECLKANPQSRPTMQTVSQMLS 1035
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456161|ref|XP_002278590.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/1017 (55%), Positives = 711/1017 (69%), Gaps = 66/1017 (6%)
Query: 4 NVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITT-------PCTWSGISCN 56
+V+S S E + LLKWKATL NHN+S L SWTL P N TN +T PC W GISCN
Sbjct: 26 HVSSYSNEETQALLKWKATLHNHNHSSLLSWTLYPNNFTNSSTHLGTEVSPCKWYGISCN 85
Query: 57 HAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLS 116
HAG +I INLT + L GTL F FS F +L+Y+D++ N L G IP IG L+KLK+L+LS
Sbjct: 86 HAGSVIRINLTESGLGGTLQAFSFSSFPNLAYVDISMNNLSGPIPPQIGLLSKLKYLDLS 145
Query: 117 SNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSI 175
N FSG IP EIGLLTNLEVLH+ N LNGSIP EIG L+SL LAL N L+G IP S+
Sbjct: 146 INQFSGGIPPEIGLLTNLEVLHLVQNQLNGSIPHEIGQLTSLYELALYTNQLEGSIPASL 205
Query: 176 GNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235
GNLS+L LYLY N L GSIP +GNL+NLV L+ N+L GPIPS+FG L+ LT L L
Sbjct: 206 GNLSNLASLYLYENQLSGSIPPEMGNLTNLVQLYSDTNNLTGPIPSTFGNLKHLTVLYLF 265
Query: 236 NN------------------------------------------------QLSGSIPQEI 247
NN QLSG IPQEI
Sbjct: 266 NNSLSGPIPPEIGNLKSLQGLSLYGNNLSGPIPVSLCDLSGLTLLHLYANQLSGPIPQEI 325
Query: 248 GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVG 307
GNLK L DL LS+NQL G++P+SL NL++LEIL L DN+LSG+ PQEIG L L +
Sbjct: 326 GNLKSLVDLELSENQLNGSIPTSLGNLTNLEILFLRDNRLSGYFPQEIGKLHKLVVLEID 385
Query: 308 GNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDF 367
NQ G LP+ ICQ GSL+ F+V DN+ G +PK+L+NC +L R + N+L GN+S+
Sbjct: 386 TNQLFGSLPEGICQGGSLERFTVSDNHLSGPIPKSLKNCRNLTRALFQGNRLTGNVSEVV 445
Query: 368 GIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFS 427
G PNL+ DLSYN+F+GELS NW CPQL L+IAGNNITG IP + G +T L LD S
Sbjct: 446 GDCPNLEFIDLSYNRFHGELSHNWGRCPQLQRLEIAGNNITGSIPEDFGISTNLILLDLS 505
Query: 428 SNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNM 487
SNHLVG++P ++ +LTSL LILN NQLSG IPPELG L+ L YLDLSANR + SIP ++
Sbjct: 506 SNHLVGEIPKKMGSLTSLLGLILNDNQLSGSIPPELGSLSHLEYLDLSANRLNGSIPEHL 565
Query: 488 GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS 547
G L LHYLN+S+N+ S IP+Q+GKL LS+LDLSHNLL G IP +I LESLE L+LS
Sbjct: 566 GDCLDLHYLNLSNNKLSHGIPVQMGKLSHLSQLDLSHNLLTGGIPAQIQGLESLEMLDLS 625
Query: 548 HNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQ 607
HNNL G IP FE+M L +DISYN+L GPIP AFR+A +E L+GNK LCG V GLQ
Sbjct: 626 HNNLCGFIPKAFEDMPALSYVDISYNQLQGPIPHSNAFRNATIEVLKGNKDLCGNVKGLQ 685
Query: 608 PCKALKSYKH--VHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRN 665
PCK V + + V + PLL AL L+ IG+F+ ++RR++ + +E + +N
Sbjct: 686 PCKYGFGVDQQPVKKSHKVVFIIIFPLLGALVLLSAFIGIFLIAERRERTPEIEEGDVQN 745
Query: 666 NQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFT 725
N LLSI T++G+ +YEEII++ +FD +CIG+GG+GSVYKAELPSG+ VAVKKLH
Sbjct: 746 N--LLSISTFDGRAMYEEIIKATKDFDPMYCIGKGGHGSVYKAELPSGNIVAVKKLHPSD 803
Query: 726 GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATE 785
+ +QK+FL++++A+T ++HRNIV+ GFCS+ RHSFLVYEYLERGSLA ILS E A +
Sbjct: 804 MDMANQKDFLNKVRAMTEIKHRNIVRLLGFCSYPRHSFLVYEYLERGSLATILSREEAKK 863
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845
+ W+ RV +IKGVAHALSYMHH+C PPIVHRD+SS N+LLD +YEAH+S+ GTAKLLK D
Sbjct: 864 LGWATRVKIIKGVAHALSYMHHDCSPPIVHRDISSNNILLDSQYEAHISNLGTAKLLKVD 923
Query: 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905
SSN S+LAGT GYVAPE AYTMKVTEK DVYSFGV+ALEVIKG+HP D + S+S S P
Sbjct: 924 SSNQSKLAGTVGYVAPEHAYTMKVTEKTDVYSFGVIALEVIKGRHPGDQILSISVS--PE 981
Query: 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
N+ + M D RLPP L E ++ +II++A +C++ANP+ RP M+I+ ++LS
Sbjct: 982 KNI--VLKDMLDPRLPP--LTPQDEGEVVAIIKLATACLNANPQSRPTMEIISQMLS 1034
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147767326|emb|CAN68996.1| hypothetical protein VITISV_008862 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/1017 (56%), Positives = 711/1017 (69%), Gaps = 71/1017 (6%)
Query: 4 NVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATN--------ITTPCTWSGISC 55
NV+S+S E + LLKWKATL N N L W+L P N TN TPC W GISC
Sbjct: 26 NVSSHSNEETQALLKWKATLLNQN---LLLWSLHPNNITNSSAQPGTATRTPCKWFGISC 82
Query: 56 NHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNL 115
AG +I INLT L GTL F FS F +L+Y D+N N+L G IP IG L+KLK+L+L
Sbjct: 83 -KAGSVIRINLTDLGLIGTLQDFSFSSFPNLAYFDINMNKLSGPIPPQIGFLSKLKYLDL 141
Query: 116 SSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-------------------------- 149
S+N FSG+IPSEIGLLTNLEVLH+ N LNGSIP
Sbjct: 142 STNQFSGRIPSEIGLLTNLEVLHLVENQLNGSIPHEIGQLKSLCDLSLYTNKLEGSIPAS 201
Query: 150 -----------------------EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYL 186
E+G+L+ L L L+ N+L GPIP ++GNL SL L L
Sbjct: 202 LGNLSNLTNLYLDENKLSGLIPPEMGNLTKLVELCLNANNLTGPIPSTLGNLKSLTLLRL 261
Query: 187 YNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQE 246
YNN L G IP+ IGNL +L L L N+L GPIP S G L L L+L +NQLSG IPQE
Sbjct: 262 YNNQLSGPIPTEIGNLKHLRNLSLSSNYLSGPIPMSLGDLSGLKSLQLFDNQLSGPIPQE 321
Query: 247 IGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSV 306
+GNL+ L DL +SQNQL G++P+SL NL +LEIL+L DN+LS IP EIG L L +
Sbjct: 322 MGNLRSLVDLEISQNQLNGSIPTSLGNLINLEILYLRDNKLSSSIPPEIGKLHKLVELEI 381
Query: 307 GGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDD 366
NQ +GFLP+ ICQ GSL+ F+V DN+ IG +P++L+NC SL R RL++NQL GNIS+
Sbjct: 382 DTNQLSGFLPEGICQGGSLENFTVFDNFLIGPIPESLKNCPSLARARLQRNQLTGNISEA 441
Query: 367 FGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDF 426
FG+ PNL +LS NKFYGELS NW C +L L IAGNNITG IP + G +TQL L+
Sbjct: 442 FGVCPNLYHINLSNNKFYGELSQNWGRCHKLQWLDIAGNNITGSIPADFGISTQLTVLNL 501
Query: 427 SSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGN 486
SSNHLVG++P +L +++SL LILN N+LSG IPPELG L DLGYLDLS NR + SIP +
Sbjct: 502 SSNHLVGEIPKKLGSVSSLWKLILNDNRLSGNIPPELGSLADLGYLDLSGNRLNGSIPEH 561
Query: 487 MGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNL 546
+G L L+YLN+S+N+ S IP+Q+GKL LS LDLSHNLL GEIP +I L+SLEKLNL
Sbjct: 562 LGNCLDLNYLNLSNNKLSHGIPVQMGKLSHLSLLDLSHNLLTGEIPSQIQGLQSLEKLNL 621
Query: 547 SHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGL 606
SHNNLSG IP FE+MHGL +DISYN+L G IP+ EAF++ +E LQGNKGLCG V GL
Sbjct: 622 SHNNLSGIIPKAFEDMHGLWQVDISYNDLQGSIPNSEAFQNVTIEVLQGNKGLCGSVKGL 681
Query: 607 QPCKALKSYKHVHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNN 666
QPC+ + K H+ ++F+ LL AL ++ IG+ + SQ R ++++ ++ +
Sbjct: 682 QPCENRSATKGTHKAVFIIIFS---LLGALLILSAFIGISLISQGR-RNAKMEKAGDVQT 737
Query: 667 QALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTG 726
+ L SI T++G+ YE II + +FD +CIG GG+GSVYKAELPSG+ VAVKKLH F
Sbjct: 738 ENLFSISTFDGRTTYEAIIEATKDFDPMYCIGEGGHGSVYKAELPSGNIVAVKKLHRFDI 797
Query: 727 ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSE-TATE 785
+ HQK+F++EI+ALT ++HRNIVK GFCSH+RHSFLVYEYLERGSL ILS E A E
Sbjct: 798 DMAHQKDFMNEIRALTEIKHRNIVKLLGFCSHSRHSFLVYEYLERGSLGTILSKELQAKE 857
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845
+ W RVN+IKGVAHALSY+HH+C PPIVHRD+SS NVLLD +YEAHVSDFGTAK LK D
Sbjct: 858 VGWGTRVNIIKGVAHALSYLHHDCVPPIVHRDISSNNVLLDSKYEAHVSDFGTAKFLKLD 917
Query: 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905
SSNWS LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV++G+HP DL+SSLS S PG
Sbjct: 918 SSNWSTLAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVMRGRHPGDLISSLSAS--PG 975
Query: 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ N + + D RLPPP L E ++ S+I++A +C++ +P+ RP MQ+V ++LS
Sbjct: 976 KD-NVVLKDVLDPRLPPPTLR--DEAEVMSVIQLATACLNGSPQSRPTMQMVSQMLS 1029
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491509|ref|XP_002278522.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/1017 (55%), Positives = 709/1017 (69%), Gaps = 71/1017 (6%)
Query: 4 NVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATN--------ITTPCTWSGISC 55
NV+S+S E + LLKWKATL N N L W+L P N TN TPC W GISC
Sbjct: 26 NVSSHSNEETQALLKWKATLLNQN---LLLWSLHPNNITNSSAQPGTATRTPCKWFGISC 82
Query: 56 NHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNL 115
AG +I INLT L GTL F FS F +L+Y D+N N+L G IP IG L+KLK+L+L
Sbjct: 83 -KAGSVIRINLTDLGLIGTLQDFSFSSFPNLAYFDINMNKLSGPIPPQIGFLSKLKYLDL 141
Query: 116 SSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-------------------------- 149
S+N FSG+IPSEIGLLTNLEVLH+ N LNGSIP
Sbjct: 142 STNQFSGRIPSEIGLLTNLEVLHLVENQLNGSIPHEIGQLKSLCDLSLYTNKLEGTIPAS 201
Query: 150 -----------------------EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYL 186
E+G+L+ L L L+ N+L GPIP ++GNL SL L L
Sbjct: 202 LGNLSNLTNLYLDENKLSGLIPPEMGNLTKLVELCLNANNLTGPIPSTLGNLKSLTLLRL 261
Query: 187 YNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQE 246
YNN L G IP+ IGNL +L L L N+L GPIP S G L L L+L +NQLSG IPQE
Sbjct: 262 YNNQLSGPIPTEIGNLKHLRNLSLSSNYLSGPIPMSLGDLSGLKSLQLFDNQLSGPIPQE 321
Query: 247 IGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSV 306
+GNL+ L DL +SQNQL G++P+ L NL +LEIL+L DN+LS IP EIG L L +
Sbjct: 322 MGNLRSLVDLEISQNQLNGSIPTLLGNLINLEILYLRDNKLSSSIPPEIGKLHKLVELEI 381
Query: 307 GGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDD 366
NQ +GFLP+ ICQ GSL+ F+V DN+ IG +P++L+NC SL R RL+ NQL GNIS+
Sbjct: 382 DTNQLSGFLPEGICQGGSLENFTVFDNFLIGPIPESLKNCPSLARARLQGNQLTGNISEA 441
Query: 367 FGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDF 426
FG+ PNL +LS NKFYGELS NW C +L L IAGNNITG IP + G +TQL L+
Sbjct: 442 FGVCPNLYHINLSNNKFYGELSQNWGRCHKLQWLDIAGNNITGSIPADFGISTQLTVLNL 501
Query: 427 SSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGN 486
SSNHLVG++P +L +++SL LILN N+LSG IPPELG L DLGYLDLS NR + SIP +
Sbjct: 502 SSNHLVGEIPKKLGSVSSLWKLILNDNRLSGNIPPELGSLADLGYLDLSGNRLNGSIPEH 561
Query: 487 MGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNL 546
+G L L+YLN+S+N+ S IP+Q+GKL LS LDLSHNLL GEIP +I L+SLEKLNL
Sbjct: 562 LGNCLDLNYLNLSNNKLSHGIPVQMGKLSHLSLLDLSHNLLTGEIPSQIQGLQSLEKLNL 621
Query: 547 SHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGL 606
SHNNLSG IP FE+MHGL +DISYN+L G IP+ EAF++ +E LQGNKGLCG V GL
Sbjct: 622 SHNNLSGIIPKAFEDMHGLWQVDISYNDLQGSIPNSEAFQNVTIEVLQGNKGLCGSVKGL 681
Query: 607 QPCKALKSYKHVHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNN 666
QPC+ + K H+ ++F+ LL AL ++ IG+ + SQ R ++++ ++ +
Sbjct: 682 QPCENRSATKGTHKAVFIIIFS---LLGALLILSAFIGISLISQGR-RNAKMEKAGDVQT 737
Query: 667 QALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTG 726
+ L SI T++G+ YE II + +FD +CIG GG+GSVYKAELPSG+ VAVKKLH F
Sbjct: 738 ENLFSISTFDGRTTYEAIIEATKDFDPMYCIGEGGHGSVYKAELPSGNIVAVKKLHRFDI 797
Query: 727 ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSE-TATE 785
+ HQK+F++EI+ALT ++HRNIVK GFCSH+RHSFLVYEYLERGSL ILS E A E
Sbjct: 798 DMAHQKDFVNEIRALTEIKHRNIVKLLGFCSHSRHSFLVYEYLERGSLGTILSKELQAKE 857
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845
+ W RVN+IKGV+HALSY+HH+C PPIVHRD+SS NVLLD +YEAHVSDFGTAK LK D
Sbjct: 858 VGWGTRVNIIKGVSHALSYLHHDCVPPIVHRDISSNNVLLDSKYEAHVSDFGTAKFLKLD 917
Query: 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905
SSNWS LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV++G+HP DL+SSLSDS PG
Sbjct: 918 SSNWSTLAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVMRGRHPGDLISSLSDS--PG 975
Query: 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ N + + D RLPPP E ++ S+I++A +C++ +P+ RP MQ+V ++LS
Sbjct: 976 KD-NVVLKDVLDPRLPPPTFR--DEAEVTSVIQLATACLNGSPQSRPTMQMVSQMLS 1029
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491512|ref|XP_002278614.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1048 bits (2710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/999 (55%), Positives = 699/999 (69%), Gaps = 46/999 (4%)
Query: 3 LNVASNSIEAARGLLKWKATLQNHNNSLLPSWTL--DPVNATNITT-------PCTWSGI 53
++ S+S E + LLKWK+TL NHN+S L SWTL DP N+TN +T PC W GI
Sbjct: 51 FDMKSDSNEETQALLKWKSTLHNHNHSFLLSWTLYPDPNNSTNSSTHHGTATGPCKWYGI 110
Query: 54 SCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFL 113
SCNHAG +I INLT + L+GTL F FS F +L+Y+D+ N L G IP IG L+KLK+L
Sbjct: 111 SCNHAGSVIRINLTESGLRGTLQAFSFSSFPNLAYVDVCINNLSGPIPPQIGLLSKLKYL 170
Query: 114 NLSSNHFSGKIPSEIGLLTNLEVLHM---FVNHLNGSIP--------------------- 149
+LS+N FSG IP EIGLLTNLEVLH+ + N L GSIP
Sbjct: 171 DLSTNQFSGGIPPEIGLLTNLEVLHLLALYTNQLEGSIPASLGNLSNLASLYLYENQLSG 230
Query: 150 ----EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL 205
E+G+L++L + D N+L G IP + GNL L LYL+NN L G IP IGNL++L
Sbjct: 231 SIPPEMGNLANLVEIYSDTNNLTGLIPSTFGNLKRLTTLYLFNNQLSGHIPPEIGNLTSL 290
Query: 206 VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG 265
+ L N+L GPIP+S G L LT L L NQLSG IP EIGNLK L DL LS+NQL G
Sbjct: 291 QGISLYANNLSGPIPASLGDLSGLTLLHLYANQLSGPIPPEIGNLKSLVDLELSENQLNG 350
Query: 266 TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSL 325
++P+SL NL++LEIL L DN LSG+ P+EIG L L + N+ +G LP+ ICQ GSL
Sbjct: 351 SIPTSLGNLTNLEILFLRDNHLSGYFPKEIGKLHKLVVLEIDTNRLSGSLPEGICQGGSL 410
Query: 326 QYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYG 385
F+V DN G +PK+++NC +L R NQL GNIS+ G PNL+ DLSYN+F+G
Sbjct: 411 VRFTVSDNLLSGPIPKSMKNCRNLTRALFGGNQLTGNISEVVGDCPNLEYIDLSYNRFHG 470
Query: 386 ELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSL 445
ELS NW CPQL L++AGN+ITG IP + G +T L LD SSNHLVG++P ++ +LTSL
Sbjct: 471 ELSHNWGRCPQLQRLEMAGNDITGSIPEDFGISTNLTLLDLSSNHLVGEIPKKMGSLTSL 530
Query: 446 NDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ 505
+L LN NQLSG IPPELG L L +LDLSANR + SI N+G L LHYLN+S+N+ S
Sbjct: 531 LELKLNDNQLSGSIPPELGSLFSLAHLDLSANRLNGSITENLGACLNLHYLNLSNNKLSN 590
Query: 506 EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGL 565
IP Q+GKL LS+LDLSHNLL GEIPP+I LESLE LNLSHNNLSG IP FE M GL
Sbjct: 591 RIPAQMGKLSHLSQLDLSHNLLSGEIPPQIEGLESLENLNLSHNNLSGFIPKAFEEMRGL 650
Query: 566 LSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPCK--ALKSYKHVHRKWR 623
IDISYN+L GPIP+ +AFR A +E L+GNK LCG V GLQPCK + + V + +
Sbjct: 651 SDIDISYNQLQGPIPNSKAFRDATIELLKGNKDLCGNVKGLQPCKNDSGAGQQPVKKGHK 710
Query: 624 TVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALLSILTYEGKLVYEE 683
V V PLL AL L+ IG+F+ ++R K+ + +E + +N+ L SI T++G+ +YEE
Sbjct: 711 IVFIIVFPLLGALVLLFAFIGIFLIAERTKRTPEIEEGDVQND--LFSISTFDGRAMYEE 768
Query: 684 IIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTG 743
II++ +FD +CIG+GG+GSVYKAEL SG+ VAVKKL++ + +Q++F +E++ALT
Sbjct: 769 IIKATKDFDPMYCIGKGGHGSVYKAELSSGNIVAVKKLYASDIDMANQRDFFNEVRALTE 828
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALS 803
++HRNIVK GFCSH RHSFLVYEYLERGSLA +LS E A ++ W+ R+N+IKGVAHALS
Sbjct: 829 IKHRNIVKLLGFCSHPRHSFLVYEYLERGSLAAMLSREEAKKLGWATRINIIKGVAHALS 888
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL 863
YMHH+C PPIVHRD+SS N+LLD +YE H+SDFGTAKLLK DSSN S LAGT+GYVAPE
Sbjct: 889 YMHHDCSPPIVHRDISSNNILLDSQYEPHISDFGTAKLLKLDSSNQSALAGTFGYVAPEH 948
Query: 864 AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
AYTMKVTEK DVYSFGV+ LEVIKG+HP D + SLS S N ++ M D RLPP
Sbjct: 949 AYTMKVTEKTDVYSFGVITLEVIKGRHPGDQILSLSVSP---EKENIVLEDMLDPRLPP- 1004
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
L E ++ SII +A +C+ NPE RP M+I+ ++LS
Sbjct: 1005 -LTAQDEGEVISIINLATACLSVNPESRPTMKIISQMLS 1042
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255545702|ref|XP_002513911.1| receptor protein kinase, putative [Ricinus communis] gi|223546997|gb|EEF48494.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/992 (54%), Positives = 707/992 (71%), Gaps = 38/992 (3%)
Query: 2 SLNVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATN---ITTPCTWSGISCNHA 58
+ N+AS+S E A LLKW ATL N S W L P N+TN T+PCTW G+SCN
Sbjct: 23 AFNIASDSAEQANSLLKWAATLHNQKYSNRSPWPLLPENSTNPNAKTSPCTWLGLSCNRG 82
Query: 59 GRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSN 118
G ++ INLT++ L GTL + FS F L +LDL+ N L IP I L KL FL+LSSN
Sbjct: 83 GSVVRINLTTSGLNGTLHELSFSAFPDLEFLDLSCNSLSSTIPLEITQLPKLIFLDLSSN 142
Query: 119 HFSGKIPSEIGL------------------------LTNLEVLHMFVNHLNGSIP-EIGH 153
SG IP +IGL LT L LH++ N +GSIP E+G+
Sbjct: 143 QLSGVIPPDIGLLTNLNTLRLSANRLDGSIPSSVGNLTELAWLHLYDNRFSGSIPSEMGN 202
Query: 154 LSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKN 213
L +L L +D N L G IP + G+L+ LV L+LYNN L G IP +G+L +L L L N
Sbjct: 203 LKNLVELFMDTNLLTGSIPSTFGSLTKLVQLFLYNNQLSGHIPQELGDLKSLTSLSLFGN 262
Query: 214 HLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSN 273
+L GPIP+S G L LT L L NQLSG+IP+E+GNL L++L LS+N+L G++P+SL N
Sbjct: 263 NLSGPIPASLGGLTSLTILHLYQNQLSGTIPKELGNLNSLSNLELSENKLTGSIPASLGN 322
Query: 274 LSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDN 333
LS LE+L L +NQLSG IP++I N L+ L + NQ TG+LPQNICQS LQ FSV+DN
Sbjct: 323 LSRLELLFLKNNQLSGPIPEQIANLSKLSLLQLQSNQLTGYLPQNICQSKVLQNFSVNDN 382
Query: 334 YFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWN 393
G +PK++R+C SL R+ LE NQ IGNIS+DFG+YP L+ D+ YNKF+GE+SS W
Sbjct: 383 RLEGPIPKSMRDCKSLVRLHLEGNQFIGNISEDFGVYPYLQFVDIRYNKFHGEISSKWGM 442
Query: 394 CPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGN 453
CP LG L I+GNNI+G IPPEIGNA +L LDFSSN LVG++P EL LTSL + L N
Sbjct: 443 CPHLGTLLISGNNISGIIPPEIGNAARLQGLDFSSNQLVGRIPKELGKLTSLVRVNLEDN 502
Query: 454 QLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGK 513
QLS G+P E G LTDL LDLSANRF++SIPGN+G L+KL+YLN+S+N+FSQEIPIQLGK
Sbjct: 503 QLSDGVPSEFGSLTDLESLDLSANRFNQSIPGNIGNLVKLNYLNLSNNQFSQEIPIQLGK 562
Query: 514 LVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573
LV LS+LDLS N L GEIP E+ ++SLE LNLS NNLSG IP + + MHGL SIDISYN
Sbjct: 563 LVHLSKLDLSQNFLIGEIPSELSGMQSLEVLNLSRNNLSGFIPGDLKEMHGLSSIDISYN 622
Query: 574 ELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPCKALKSYKHVHRKWRTVLFTV--LP 631
+L+GP+P +AF+++ +EA QGNKGLCG V GLQPCK + + K+ LF V LP
Sbjct: 623 KLEGPVPDNKAFQNSSIEAFQGNKGLCGHVQGLQPCKPSSTEQGSSIKFHKRLFLVISLP 682
Query: 632 LLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNF 691
L A LI+ +G+ +R K++ E E++++ ++ +L I +++GK +++EII + ++F
Sbjct: 683 LFGAF-LILSFLGVLFFQSKRSKEALEAEKSSQESEEILLITSFDGKSMHDEIIEATDSF 741
Query: 692 DESFCIGRGGYGSVYKAELPSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGVRHRNIV 750
++ +CIG+GG GSVYKA+L SG TVAVKKLH S +QKEF SEI+ALT ++HRNIV
Sbjct: 742 NDIYCIGKGGCGSVYKAKLSSGSTVAVKKLHQSHDAWKPYQKEFWSEIRALTEIKHRNIV 801
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARIL-SSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
KFYGFCS++ +SFLVYE +E+GSLA IL +E A E++W KR N+IKGVA+ALSYMHH+C
Sbjct: 802 KFYGFCSYSAYSFLVYECIEKGSLATILRDNEAAKELEWFKRANIIKGVANALSYMHHDC 861
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
PPIVHRD+SSKN+LLD E EA VSDFG A++L DSS+ + LAGT+GY+APELAY++ V
Sbjct: 862 SPPIVHRDISSKNILLDSENEARVSDFGIARILNLDSSHRTALAGTFGYMAPELAYSIVV 921
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929
TEKCDVYSFGVLALEVI G+HP +++SS+S SS + ++++ D RLP P EV V
Sbjct: 922 TEKCDVYSFGVLALEVINGKHPGEIISSISSSSSTRKML---LENIVDLRLPFPSPEVQV 978
Query: 930 EDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
E L +I+ +A +C+++NP+ RP M+++C +L
Sbjct: 979 E--LVNILNLAFTCLNSNPQVRPTMEMICHML 1008
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147772402|emb|CAN73988.1| hypothetical protein VITISV_022117 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/1010 (54%), Positives = 685/1010 (67%), Gaps = 93/1010 (9%)
Query: 4 NVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIIS 63
+V+S S E + LLKWKA+LQNH++S L SW L P N+TN +T H G
Sbjct: 26 HVSSYSNEETQALLKWKASLQNHDHSSLLSWDLYPNNSTNSST----------HLG---- 71
Query: 64 INLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGK 123
T+TS P ++LS G IP IG L++LK+L+LS N FSG
Sbjct: 72 ---TATS--------PCKCMNNLS----------GPIPPQIGLLSELKYLDLSINQFSGG 110
Query: 124 IPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLV 182
IPSEIGLLTNLEVLH+ N LNGSIP EIG L+SL LAL N L+G IP S+GNLS+L
Sbjct: 111 IPSEIGLLTNLEVLHLVQNQLNGSIPHEIGQLASLYELALYTNQLEGSIPASLGNLSNLA 170
Query: 183 GLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNN----- 237
LYLY N L SIP +GNL+NLV ++ N+L GPIPS+FG L++LT L L NN
Sbjct: 171 YLYLYENQLSDSIPPEMGNLTNLVEIYSDTNNLIGPIPSTFGNLKRLTVLYLFNNRLSGH 230
Query: 238 -------------------------------------------QLSGSIPQEIGNLKLLT 254
QLSG IPQEIGNLK L
Sbjct: 231 IPPEIGNLKSLQGLSLYENNLSGPIPASLGDLSGLTLLHLYANQLSGPIPQEIGNLKSLV 290
Query: 255 DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314
DL LS+NQL G++P+SL NL++LE L L DNQLSG+IPQEIG L L + NQ G
Sbjct: 291 DLELSENQLNGSIPTSLGNLTNLETLFLRDNQLSGYIPQEIGKLHKLVVLEIDTNQLFGS 350
Query: 315 LPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLK 374
LP+ ICQ GSL+ F+V DN+ G +PK+L+NC +L R NQL GNIS+ G PNL+
Sbjct: 351 LPEGICQGGSLERFTVSDNHLSGPIPKSLKNCKNLTRALFGGNQLTGNISEVVGDCPNLE 410
Query: 375 LFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGK 434
++SYN F+GELS NW P+L L++A NNITG IP + G +T L LD SSNHL G+
Sbjct: 411 YINVSYNSFHGELSHNWGRYPRLQRLEMAWNNITGSIPEDFGISTDLTLLDLSSNHLFGE 470
Query: 435 VPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLH 494
+P ++ ++TSL LILN NQLSG IPPELG L DLGYLDLSANR + SIP ++G L L+
Sbjct: 471 IPKKMGSVTSLWKLILNDNQLSGNIPPELGSLADLGYLDLSANRLNGSIPEHLGDCLGLN 530
Query: 495 YLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGS 554
YLN+S+N+ S IP+Q+GKL LS+LDLSHNLL G+IPP+I L+SLE LNLSHNNLSG
Sbjct: 531 YLNLSNNKLSHGIPVQMGKLGHLSQLDLSHNLLTGDIPPQIEGLQSLENLNLSHNNLSGF 590
Query: 555 IPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPCK--AL 612
IP FE M GL +DISYN+L GPIP+ +AFR A +EAL+GNKGLCG V L+PCK +
Sbjct: 591 IPKAFEEMLGLSDVDISYNQLQGPIPNSKAFRDATIEALKGNKGLCGNVKRLRPCKYGSG 650
Query: 613 KSYKHVHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALLSI 672
+ V + + V + PLL AL L+ IG+F+ + RR++ + +E +N+ L SI
Sbjct: 651 VDQQPVKKSHKVVFIIIFPLLGALVLLFAFIGIFLIAARRERTPEIKEGEVQND--LFSI 708
Query: 673 LTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQK 732
T++G+ +YEEII++ +FD +CIG+GG+GSVYKAELPS + VAVKKLH E +QK
Sbjct: 709 STFDGRTMYEEIIKATKDFDPMYCIGKGGHGSVYKAELPSSNIVAVKKLHPSDTEMANQK 768
Query: 733 EFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRV 792
+FL+EI+ALT ++HRNIVK GFCSH RH FLVYEYLERGSLA ILS E A ++ W+ RV
Sbjct: 769 DFLNEIRALTEIKHRNIVKLLGFCSHPRHKFLVYEYLERGSLATILSREEAKKLGWATRV 828
Query: 793 NVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852
N+IKGVAHAL+YMHH+C PPIVHRD+SS N+LLD +YEAH+SDFGTAKLLK DSSN S L
Sbjct: 829 NIIKGVAHALAYMHHDCSPPIVHRDISSNNILLDSQYEAHISDFGTAKLLKLDSSNQSIL 888
Query: 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912
AGT+GY+APELAYTMKVTEK DV+SFGV+ALEVIKG+HP D + SLS S N A+
Sbjct: 889 AGTFGYLAPELAYTMKVTEKTDVFSFGVIALEVIKGRHPGDQILSLSVSP---EKDNIAL 945
Query: 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ M D RLPP L E ++ +II+ A C+ ANP+ RP MQ V ++LS
Sbjct: 946 EDMLDPRLPP--LTPQDEGEVIAIIKQATECLKANPQSRPTMQTVSQMLS 993
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7267528|emb|CAB78010.1| receptor protein kinase-like protein [Arabidopsis thaliana] gi|7321074|emb|CAB82121.1| receptor protein kinase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/1009 (48%), Positives = 672/1009 (66%), Gaps = 73/1009 (7%)
Query: 5 VASNSIEAARGLLKWKATLQNH-NNSLLPSWTLDPVNATNITTPCT-WSGISCNHAGRII 62
S ++E A LLKWK+T N ++S L SW ++P N ++ CT W G++C+ G II
Sbjct: 25 AVSATVEEANALLKWKSTFTNQTSSSKLSSW-VNP----NTSSFCTSWYGVACS-LGSII 78
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
+NLT+T ++GT + FPFS +L+++DL+ N+ G I G +KL++ +LS N G
Sbjct: 79 RLNLTNTGIEGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSKLEYFDLSINQLVG 138
Query: 123 KIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSL 181
+IP E+G L+NL+ LH+ N LNGSIP EIG L+ + +A+ N L GPIP S GNL+ L
Sbjct: 139 EIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLTKL 198
Query: 182 VGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241
V LYL+ NSL GSIPS IGNL NL L L +N+L G IPSSFG L+ +T L + NQLSG
Sbjct: 199 VNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSG 258
Query: 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLY------------------ 283
IP EIGN+ L LSL N+L G +PS+L N+ +L +LHLY
Sbjct: 259 EIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEMESM 318
Query: 284 ------------------------------DNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313
DNQLSG IP I N L L V N FTG
Sbjct: 319 IDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTELTVLQVDTNNFTG 378
Query: 314 FLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNL 373
FLP IC+ G L+ ++ DN+F G +PK+LR+C SL RVR + N G+IS+ FG+YP L
Sbjct: 379 FLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFSGDISEAFGVYPTL 438
Query: 374 KLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVG 433
DLS N F+G+LS+NW +L ++ N+ITG IPPEI N TQL +LD SSN + G
Sbjct: 439 NFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNRITG 498
Query: 434 KVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKL 493
++P ++N+ ++ L LNGN+LSG IP + LLT+L YLDLS+NRFS IP + L +L
Sbjct: 499 ELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPRL 558
Query: 494 HYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSG 553
+Y+N+S N+ Q IP L KL QL LDLS+N L GEI + +L++LE+L+LSHNNLSG
Sbjct: 559 YYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSG 618
Query: 554 SIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVS---GLQPCK 610
IP +F++M L +D+S+N L GPIP AFR+AP +A +GNK LCG V+ GL+PC
Sbjct: 619 QIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLCGSVNTTQGLKPC- 677
Query: 611 ALKSYKHVHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALL 670
++ S K H+ +++ ++P++ A+ ++ G+F+C ++R K +E ++ + L
Sbjct: 678 SITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEEHTDSESGGET-L 736
Query: 671 SILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGET-- 728
SI +++GK+ Y+EII++ FD + IG GG+G VYKA+LP+ +AVKKL+ T +
Sbjct: 737 SIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAKLPNA-IMAVKKLNETTDSSIS 795
Query: 729 --THQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL-SSETATE 785
+ ++EFL+EI+ALT +RHRN+VK +GFCSH R++FLVYEY+ERGSL ++L + + A +
Sbjct: 796 NPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKK 855
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845
+DW KR+NV+KGVAHALSYMHH+ P IVHRD+SS N+LL +YEA +SDFGTAKLLKPD
Sbjct: 856 LDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPD 915
Query: 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905
SSNWS +AGTYGYVAPELAY MKVTEKCDVYSFGVL LEVIKG+HP DL+S+LS SS P
Sbjct: 916 SSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLS-SSPPD 974
Query: 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM 954
A + ++ + D RLP P E +++++ I++VAL C+ ++P+ RP M
Sbjct: 975 ATL--SLKSISDHRLPEPTPE--IKEEVLEILKVALLCLHSDPQARPTM 1019
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186511602|ref|NP_849538.2| Leucine-rich repeat-containing protein [Arabidopsis thaliana] gi|281185491|sp|Q8VZG8.3|Y4885_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850; Flags: Precursor gi|18086327|gb|AAL57627.1| AT4g08850/T32A17_160 [Arabidopsis thaliana] gi|224589610|gb|ACN59338.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332657282|gb|AEE82682.1| Leucine-rich repeat-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/1009 (48%), Positives = 672/1009 (66%), Gaps = 73/1009 (7%)
Query: 5 VASNSIEAARGLLKWKATLQNH-NNSLLPSWTLDPVNATNITTPCT-WSGISCNHAGRII 62
S ++E A LLKWK+T N ++S L SW ++P N ++ CT W G++C+ G II
Sbjct: 43 AVSATVEEANALLKWKSTFTNQTSSSKLSSW-VNP----NTSSFCTSWYGVACS-LGSII 96
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
+NLT+T ++GT + FPFS +L+++DL+ N+ G I G +KL++ +LS N G
Sbjct: 97 RLNLTNTGIEGTFEDFPFSSLPNLTFVDLSMNRFSGTISPLWGRFSKLEYFDLSINQLVG 156
Query: 123 KIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSL 181
+IP E+G L+NL+ LH+ N LNGSIP EIG L+ + +A+ N L GPIP S GNL+ L
Sbjct: 157 EIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLTKL 216
Query: 182 VGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241
V LYL+ NSL GSIPS IGNL NL L L +N+L G IPSSFG L+ +T L + NQLSG
Sbjct: 217 VNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVTLLNMFENQLSG 276
Query: 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLY------------------ 283
IP EIGN+ L LSL N+L G +PS+L N+ +L +LHLY
Sbjct: 277 EIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEMESM 336
Query: 284 ------------------------------DNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313
DNQLSG IP I N L L + N FTG
Sbjct: 337 IDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNNFTG 396
Query: 314 FLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNL 373
FLP IC+ G L+ ++ DN+F G +PK+LR+C SL RVR + N G+IS+ FG+YP L
Sbjct: 397 FLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFKGNSFSGDISEAFGVYPTL 456
Query: 374 KLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVG 433
DLS N F+G+LS+NW +L ++ N+ITG IPPEI N TQL +LD SSN + G
Sbjct: 457 NFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNRITG 516
Query: 434 KVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKL 493
++P ++N+ ++ L LNGN+LSG IP + LLT+L YLDLS+NRFS IP + L +L
Sbjct: 517 ELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPRL 576
Query: 494 HYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSG 553
+Y+N+S N+ Q IP L KL QL LDLS+N L GEI + +L++LE+L+LSHNNLSG
Sbjct: 577 YYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLSG 636
Query: 554 SIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVS---GLQPCK 610
IP +F++M L +D+S+N L GPIP AFR+AP +A +GNK LCG V+ GL+PC
Sbjct: 637 QIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLCGSVNTTQGLKPC- 695
Query: 611 ALKSYKHVHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALL 670
++ S K H+ +++ ++P++ A+ ++ G+F+C ++R K +E ++ + L
Sbjct: 696 SITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEEHTDSESGGET-L 754
Query: 671 SILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGET-- 728
SI +++GK+ Y+EII++ FD + IG GG+G VYKA+LP+ +AVKKL+ T +
Sbjct: 755 SIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAKLPNA-IMAVKKLNETTDSSIS 813
Query: 729 --THQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL-SSETATE 785
+ ++EFL+EI+ALT +RHRN+VK +GFCSH R++FLVYEY+ERGSL ++L + + A +
Sbjct: 814 NPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKK 873
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845
+DW KR+NV+KGVAHALSYMHH+ P IVHRD+SS N+LL +YEA +SDFGTAKLLKPD
Sbjct: 874 LDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPD 933
Query: 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905
SSNWS +AGTYGYVAPELAY MKVTEKCDVYSFGVL LEVIKG+HP DL+S+LS SS P
Sbjct: 934 SSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLS-SSPPD 992
Query: 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM 954
A + ++ + D RLP P E +++++ I++VAL C+ ++P+ RP M
Sbjct: 993 ATL--SLKSISDHRLPEPTPE--IKEEVLEILKVALLCLHSDPQARPTM 1037
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297813345|ref|XP_002874556.1| hypothetical protein ARALYDRAFT_489780 [Arabidopsis lyrata subsp. lyrata] gi|297320393|gb|EFH50815.1| hypothetical protein ARALYDRAFT_489780 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/1006 (48%), Positives = 671/1006 (66%), Gaps = 70/1006 (6%)
Query: 5 VASNSIEAARGLLKWKATLQNH-NNSLLPSWTLDPVNATNITTPCT-WSGISCNHAGRII 62
V S ++E A LLKWK+T N ++S L SW ++P N ++ CT W G+SC G I+
Sbjct: 20 VVSATVEEANALLKWKSTFTNQTSSSKLSSW-VNP----NTSSFCTSWYGVSC-LRGSIV 73
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
+NLT+T ++GT ++FPFS +L+Y+DL+ N+ G I G +KL + +LS N G
Sbjct: 74 RLNLTNTGIEGTFEEFPFSSLPNLTYVDLSMNRFSGTISPLWGRFSKLVYFDLSINQLVG 133
Query: 123 KIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSL 181
+IP E+G L+NL+ LH+ N LNGSIP EIG L+ + +A+ N L GPIP S GNL+ L
Sbjct: 134 EIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIYDNLLTGPIPSSFGNLTRL 193
Query: 182 VGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241
V LYL+ NSL G IPS IGNL NL L L +N+L G IPSSFG L+ ++ L + NQLSG
Sbjct: 194 VNLYLFINSLSGPIPSEIGNLPNLRELCLDRNNLTGKIPSSFGNLKNVSLLNMFENQLSG 253
Query: 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGN---- 297
IP EIGN+ L LSL N+L G +PS+L N+ +L ILHLY NQLSG IP E+G+
Sbjct: 254 EIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAILHLYLNQLSGSIPPELGDMEAM 313
Query: 298 ---------------------------FMNLNSLS-----------------VGGNQFTG 313
F+ N LS + N FTG
Sbjct: 314 IDLEISENKLTGPVPDSFGKLTVLEWLFLRDNQLSGPIPPGIANSTELTVLQLDTNNFTG 373
Query: 314 FLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNL 373
FLP IC+SG L+ ++ DN+F G +PK+LRNC SL RVR + N G+ISD FG+YP L
Sbjct: 374 FLPDTICRSGKLENLTLDDNHFEGPVPKSLRNCKSLVRVRFKGNHFSGDISDAFGVYPTL 433
Query: 374 KLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVG 433
DLS N F+G+LS+NW +L ++ N+I+G IPPEI N TQL++LD S N + G
Sbjct: 434 NFIDLSNNNFHGQLSANWEQSTKLVAFILSNNSISGAIPPEIWNMTQLNQLDLSFNRITG 493
Query: 434 KVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKL 493
++P ++N+ ++ L LNGNQLSG IP + LLT+L YLDLS+N+F IP + L +L
Sbjct: 494 ELPESISNINRISKLQLNGNQLSGKIPSGIRLLTNLEYLDLSSNQFGFEIPATLNNLPRL 553
Query: 494 HYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSG 553
+Y+N+S N+ Q IP L KL QL LDLS+N L GEI + +L++LE+L+LSHNNLSG
Sbjct: 554 YYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFGSLQNLERLDLSHNNLSG 613
Query: 554 SIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPCKALK 613
IPT+F++M L ID+S+N L GPIP AFR+A AL+GN LCG+ L+PC ++
Sbjct: 614 QIPTSFKDMLALTHIDVSHNNLQGPIPDNAAFRNASPNALEGNNDLCGDNKALKPC-SIT 672
Query: 614 SYKHVHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALLSIL 673
S K H+ +++ ++P++ A+ ++ G+F+C ++R K +E ++ + LSI
Sbjct: 673 SSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKRTKQIEENSDSESGGET-LSIF 731
Query: 674 TYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGET----T 729
+++GK+ Y+EII++ FD + IG GG+G VYKA+LP+ +AVKKL+ T + +
Sbjct: 732 SFDGKVRYQEIIKATGEFDSKYLIGTGGHGKVYKAKLPNA-IMAVKKLNETTDSSITNPS 790
Query: 730 HQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL-SSETATEMDW 788
++EFL+EI+ALT +RHRN+VK +GFCSH R++FLVYEY+ERGSL ++L + + A ++DW
Sbjct: 791 TKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKKLDW 850
Query: 789 SKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848
KR+NV+KGVA ALSYMHH+ P IVHRD+SS N+LL +YEA +SDFGTAKLLKPDSSN
Sbjct: 851 GKRINVVKGVADALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPDSSN 910
Query: 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANM 908
WS +AGTYGYVAPELAY MKVTEKCDVYSFGVL LEVIKG+HP DL+S+LS SS P ++
Sbjct: 911 WSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLS-SSPPDTSL 969
Query: 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM 954
++ + D RLP P E +++++ I++VAL C+ ++P+ RP M
Sbjct: 970 --SLKTISDHRLPEPTPE--IKEEVLEILKVALMCLHSDPQARPTM 1011
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 964 | ||||||
| TAIR|locus:2138268 | 1045 | AT4G08850 [Arabidopsis thalian | 0.921 | 0.849 | 0.469 | 2e-214 | |
| TAIR|locus:2011339 | 1120 | AT1G35710 [Arabidopsis thalian | 0.906 | 0.780 | 0.471 | 2.3e-206 | |
| TAIR|locus:2160791 | 1102 | AT5G63930 [Arabidopsis thalian | 0.560 | 0.490 | 0.376 | 2.5e-151 | |
| TAIR|locus:2046525 | 1124 | AT2G33170 [Arabidopsis thalian | 0.568 | 0.487 | 0.380 | 2.8e-150 | |
| TAIR|locus:2020417 | 1101 | AT1G17230 [Arabidopsis thalian | 0.919 | 0.804 | 0.366 | 3.5e-146 | |
| TAIR|locus:2120362 | 1249 | GSO1 "GASSHO1" [Arabidopsis th | 0.857 | 0.662 | 0.350 | 4.1e-120 | |
| TAIR|locus:2085949 | 1141 | AT3G24240 [Arabidopsis thalian | 0.544 | 0.460 | 0.384 | 3.2e-134 | |
| TAIR|locus:2120412 | 992 | BAM3 "BARELY ANY MERISTEM 3" [ | 0.614 | 0.596 | 0.334 | 6e-133 | |
| TAIR|locus:2097310 | 1002 | BAM2 "BARELY ANY MERISTEM 2" [ | 0.613 | 0.589 | 0.329 | 6e-133 | |
| TAIR|locus:2156349 | 1252 | GSO2 "GASSHO 2" [Arabidopsis t | 0.850 | 0.654 | 0.359 | 6.2e-133 |
| TAIR|locus:2138268 AT4G08850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2072 (734.4 bits), Expect = 2.0e-214, P = 2.0e-214
Identities = 426/907 (46%), Positives = 584/907 (64%)
Query: 59 GRIISINLTSTSLKGTLDQFPFSL--FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLS 116
GR + S+ + + P L S+L L L EN+L G+IPS IG LTK+ + +
Sbjct: 139 GRFSKLEYFDLSINQLVGEIPPELGDLSNLDTLHLVENKLNGSIPSEIGRLTKVTEIAIY 198
Query: 117 SNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSI 175
N +G IPS G LT L L++F+N L+GSIP EIG+L +L+ L LD N+L G IP S
Sbjct: 199 DNLLTGPIPSSFGNLTKLVNLYLFINSLSGSIPSEIGNLPNLRELCLDRNNLTGKIPSSF 258
Query: 176 GNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235
GNL ++ L ++ N L G IP IGN++ L L L N L GPIPS+ G ++ L L L
Sbjct: 259 GNLKNVTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLY 318
Query: 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPXXXXXXXXXXXXXXYDNQLSGHIPQEI 295
NQL+GSIP E+G ++ + DL +S+N+L G VP DNQLSG IP I
Sbjct: 319 LNQLNGSIPPELGEMESMIDLEISENKLTGPVPDSFGKLTALEWLFLRDNQLSGPIPPGI 378
Query: 296 GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355
N L L + N FTGFLP IC+ G L+ ++ DN+F G +PK+LR+C SL RVR +
Sbjct: 379 ANSTELTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLRDCKSLIRVRFK 438
Query: 356 KNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI 415
N G+IS+ FG+YP L DLS N F+G+LS+NW +L ++ N+ITG IPPEI
Sbjct: 439 GNSFSGDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEI 498
Query: 416 GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEXXXXXXXXXXXXS 475
N TQL +LD SSN + G++P ++N+ ++ L LNGN+LSG IP S
Sbjct: 499 WNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLS 558
Query: 476 ANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEI 535
+NRFS IP + L +L+Y+N+S N+ Q IP L KL QL LDLS+N L GEI +
Sbjct: 559 SNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQF 618
Query: 536 CNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQG 595
+L++LE+L+LSHNNLSG IP +F++M L +D+S+N L GPIP AFR+AP +A +G
Sbjct: 619 RSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAFRNAPPDAFEG 678
Query: 596 NKGLCGEVS---GLQPCKALKSYKHVHRKWRTVLFTVLPXXXXXXXXXXXXXMFVCSQRR 652
NK LCG V+ GL+PC ++ S K H+ +++ ++P +F+C ++R
Sbjct: 679 NKDLCGSVNTTQGLKPC-SITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGIFICFRKR 737
Query: 653 KKDSXXXXXXXXXXXALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPS 712
K L SI +++GK+ Y+EII++ FD + IG GG+G VYKA+LP+
Sbjct: 738 TKQIEEHTDSESGGETL-SIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHGKVYKAKLPN 796
Query: 713 GDTVAVKKLHSFTGET----THQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768
+AVKKL+ T + + ++EFL+EI+ALT +RHRN+VK +GFCSH R++FLVYEY
Sbjct: 797 A-IMAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNTFLVYEY 855
Query: 769 LERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827
+ERGSL ++L ++ A ++DW KR+NV+KGVAHALSYMHH+ P IVHRD+SS N+LL
Sbjct: 856 MERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGE 915
Query: 828 EYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK 887
+YEA +SDFGTAKLLKPDSSNWS +AGTYGYVAPELAY MKVTEKCDVYSFGVL LEVIK
Sbjct: 916 DYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIK 975
Query: 888 GQHPKXXXXXXXXXXXPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDAN 947
G+HP P A ++ + + D RLP P E+ ++++ I++VAL C+ ++
Sbjct: 976 GEHP-GDLVSTLSSSPPDATLS--LKSISDHRLPEPTPEI--KEEVLEILKVALLCLHSD 1030
Query: 948 PERRPNM 954
P+ RP M
Sbjct: 1031 PQARPTM 1037
|
|
| TAIR|locus:2011339 AT1G35710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1996 (707.7 bits), Expect = 2.3e-206, P = 2.3e-206
Identities = 424/899 (47%), Positives = 566/899 (62%)
Query: 66 LTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIP 125
L+ L G++ +L +L L L EN L G IP IGN+ + L LS N +G IP
Sbjct: 229 LSQNKLTGSIPSTLGNL-KNLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNKLTGSIP 287
Query: 126 SEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGL 184
S +G L NL +L +F N+L G IP ++G++ S+ +L L N L G IP S+GNL +L L
Sbjct: 288 SSLGNLKNLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTIL 347
Query: 185 YLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244
YLY N L G IP +GN+ +++ L L N L G IPSSFG L+ LT L L N L+G IP
Sbjct: 348 YLYENYLTGVIPPELGNMESMIDLQLNNNKLTGSIPSSFGNLKNLTYLYLYLNYLTGVIP 407
Query: 245 QEIGNLKLLTDLSLSQNQLRGTVPXXXXXXXXXXXXXXYDNQLSGHIPQEIGNFMNLNSL 304
QE+GN++ + +L LSQN+L G+VP N LSG IP + N +L +L
Sbjct: 408 QELGNMESMINLDLSQNKLTGSVPDSFGNFTKLESLYLRVNHLSGAIPPGVANSSHLTTL 467
Query: 305 SVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS 364
+ N FTGF P+ +C+ LQ S+ N+ G +PK+LR+C SL R R N+ G+I
Sbjct: 468 ILDTNNFTGFFPETVCKGRKLQNISLDYNHLEGPIPKSLRDCKSLIRARFLGNKFTGDIF 527
Query: 365 DDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHEL 424
+ FGIYP+L D S+NKF+GE+SSNW P+LG L ++ NNITG IP EI N TQL EL
Sbjct: 528 EAFGIYPDLNFIDFSHNKFHGEISSNWEKSPKLGALIMSNNNITGAIPTEIWNMTQLVEL 587
Query: 425 DFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEXXXXXXXXXXXXSANRFSKSIP 484
D S+N+L G++P + NLT+L+ L LNGNQLSG +P S+N FS IP
Sbjct: 588 DLSTNNLFGELPEAIGNLTNLSRLRLNGNQLSGRVPAGLSFLTNLESLDLSSNNFSSEIP 647
Query: 485 GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKL 544
LKLH +N+S N+F IP +L KL QL++LDLSHN L GEIP ++ +L+SL+KL
Sbjct: 648 QTFDSFLKLHDMNLSRNKFDGSIP-RLSKLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKL 706
Query: 545 NLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEV- 603
+LSHNNLSG IPT FE M L ++DIS N+L+GP+P FR A +AL+ N GLC +
Sbjct: 707 DLSHNNLSGLIPTTFEGMIALTNVDISNNKLEGPLPDTPTFRKATADALEENIGLCSNIP 766
Query: 604 -SGLQPCKALKSYKHVHRKWRTVLFTVLPXXXXXXXXXXXXXMFV-CSQRRKKDSXXXXX 661
L+PC+ LK K + V++ ++P F C ++RK +
Sbjct: 767 KQRLKPCRELKKPK---KNGNLVVWILVPILGVLVILSICANTFTYCIRKRKLQNGRNTD 823
Query: 662 XXXXXXALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTV-AVKK 720
+SI + +GK Y++II S N FD + IG GGY VY+A L DT+ AVK+
Sbjct: 824 PETGEN--MSIFSVDGKFKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQ--DTIIAVKR 879
Query: 721 LHSFTGETTHQ----KEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLAR 776
LH E + +EFL+E+KALT +RHRN+VK +GFCSH RH+FL+YEY+E+GSL +
Sbjct: 880 LHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNK 939
Query: 777 ILSS-ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSD 835
+L++ E A + W+KR+NV+KGVAHALSYMHH+ PIVHRD+SS N+LLD +Y A +SD
Sbjct: 940 LLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISD 999
Query: 836 FGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKXXX 895
FGTAKLLK DSSNWS +AGTYGYVAPE AYTMKVTEKCDVYSFGVL LE+I G+HP
Sbjct: 1000 FGTAKLLKTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHP--GD 1057
Query: 896 XXXXXXXXPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM 954
PG ++ + + D R+ P + +KL ++E+AL C+ ANPE RP M
Sbjct: 1058 LVSSLSSSPGEALS--LRSISDERVLEPRGQN--REKLLKMVEMALLCLQANPESRPTM 1112
|
|
| TAIR|locus:2160791 AT5G63930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 2.5e-151, Sum P(2) = 2.5e-151
Identities = 206/547 (37%), Positives = 293/547 (53%)
Query: 59 GRIISINLTSTSLKGTLDQFPFSL--FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLS 116
G ++S++ T Q P S+ L+ +N + G++PS IG L L L+
Sbjct: 166 GNLLSLSQLVTYSNNISGQLPRSIGNLKRLTSFRAGQNMISGSLPSEIGGCESLVMLGLA 225
Query: 117 SNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSI 175
N SG++P EIG+L L + ++ N +G IP EI + +SL+ LAL N L GPIP +
Sbjct: 226 QNQLSGELPKEIGMLKKLSQVILWENEFSGFIPREISNCTSLETLALYKNQLVGPIPKEL 285
Query: 176 GNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235
G+L SL LYLY N L G+IP IGNLS + + +N L G IP G + L L L
Sbjct: 286 GDLQSLEFLYLYRNGLNGTIPREIGNLSYAIEIDFSENALTGEIPLELGNIEGLELLYLF 345
Query: 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPXXXXXXXXXXXXXXYDNQLSGHIPQEI 295
NQL+G+IP E+ LK L+ L LS N L G +P + N LSG IP ++
Sbjct: 346 ENQLTGTIPVELSTLKNLSKLDLSINALTGPIPLGFQYLRGLFMLQLFQNSLSGTIPPKL 405
Query: 296 GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355
G + +L L + N +G +P +C ++ ++ N G++P + C +L ++RL
Sbjct: 406 GWYSDLWVLDMSDNHLSGRIPSYLCLHSNMIILNLGTNNLSGNIPTGITTCKTLVQLRLA 465
Query: 356 KNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI 415
+N L+G + N+ +L N+F G + NC L L++A N TG +P EI
Sbjct: 466 RNNLVGRFPSNLCKQVNVTAIELGQNRFRGSIPREVGNCSALQRLQLADNGFTGELPREI 525
Query: 416 GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEXXXXXXXXXXXXS 475
G +QL L+ SSN L G+VP E+ N L L + N SG +P E S
Sbjct: 526 GMLSQLGTLNISSNKLTGEVPSEIFNCKMLQRLDMCCNNFSGTLPSEVGSLYQLELLKLS 585
Query: 476 ANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS-ELDLSHNLLRGEIPPE 534
N S +IP +G L +L L M N F+ IP +LG L L L+LS+N L GEIPPE
Sbjct: 586 NNNLSGTIPVALGNLSRLTELQMGGNLFNGSIPRELGSLTGLQIALNLSYNKLTGEIPPE 645
Query: 535 ICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQ 594
+ NL LE L L++NNLSG IP++F N+ LL + SYN L GPIP + R+ + +
Sbjct: 646 LSNLVMLEFLLLNNNNLSGEIPSSFANLSSLLGYNFSYNSLTGPIPLL---RNISMSSFI 702
Query: 595 GNKGLCG 601
GN+GLCG
Sbjct: 703 GNEGLCG 709
|
|
| TAIR|locus:2046525 AT2G33170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 900 (321.9 bits), Expect = 2.8e-150, Sum P(2) = 2.8e-150
Identities = 211/554 (38%), Positives = 296/554 (53%)
Query: 68 STSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSE 127
+ +L G L + +L + L+ +N GNIP+ IG LK L L+ N SG++P E
Sbjct: 190 TNNLTGPLPRSLGNL-NKLTTFRAGQNDFSGNIPTEIGKCLNLKLLGLAQNFISGELPKE 248
Query: 128 IGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYL 186
IG+L L+ + ++ N +G IP +IG+L+SL+ LAL GN L GPIP IGN+ SL LYL
Sbjct: 249 IGMLVKLQEVILWQNKFSGFIPKDIGNLTSLETLALYGNSLVGPIPSEIGNMKSLKKLYL 308
Query: 187 YNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQE 246
Y N L G+IP +G LS ++ + +N L G IP + +L L L N+L+G IP E
Sbjct: 309 YQNQLNGTIPKELGKLSKVMEIDFSENLLSGEIPVELSKISELRLLYLFQNKLTGIIPNE 368
Query: 247 IGNLKLLTDLSLSQNQLRGTVPXXXXXXXXXXXXXXYDNQLSGHIPQEIGNFMNLNSLSV 306
+ L+ L L LS N L G +P + N LSG IPQ +G + L +
Sbjct: 369 LSKLRNLAKLDLSINSLTGPIPPGFQNLTSMRQLQLFHNSLSGVIPQGLGLYSPLWVVDF 428
Query: 307 GGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDD 366
NQ +G +P ICQ +L ++ N G++P + C SL ++R+ N+L G +
Sbjct: 429 SENQLSGKIPPFICQQSNLILLNLGSNRIFGNIPPGVLRCKSLLQLRVVGNRLTGQFPTE 488
Query: 367 FGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDF 426
NL +L N+F G L C +L L +A N + +P EI + L +
Sbjct: 489 LCKLVNLSAIELDQNRFSGPLPPEIGTCQKLQRLHLAANQFSSNLPNEISKLSNLVTFNV 548
Query: 427 SSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEXXXXXXXXXXXXSANRFSKSIPGN 486
SSN L G +P E+AN L L L+ N G +PPE S NRFS +IP
Sbjct: 549 SSNSLTGPIPSEIANCKMLQRLDLSRNSFIGSLPPELGSLHQLEILRLSENRFSGNIPFT 608
Query: 487 MGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS-ELDLSHNLLRGEIPPEICNLESLEKLN 545
+G L L L M N FS IP QLG L L ++LS+N GEIPPEI NL L L+
Sbjct: 609 IGNLTHLTELQMGGNLFSGSIPPQLGLLSSLQIAMNLSYNDFSGEIPPEIGNLHLLMYLS 668
Query: 546 LSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSG 605
L++N+LSG IPT FEN+ LL + SYN L G +P + F++ + + GNKGLCG
Sbjct: 669 LNNNHLSGEIPTTFENLSSLLGCNFSYNNLTGQLPHTQIFQNMTLTSFLGNKGLCG--GH 726
Query: 606 LQPCK-ALKSYKHV 618
L+ C + S+ H+
Sbjct: 727 LRSCDPSHSSWPHI 740
|
|
| TAIR|locus:2020417 AT1G17230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1428 (507.7 bits), Expect = 3.5e-146, P = 3.5e-146
Identities = 334/911 (36%), Positives = 473/911 (51%)
Query: 68 STSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSE 127
S +L G + L L + N G IPS I LK L L+ N G +P +
Sbjct: 172 SNNLTGVIPPSMAKL-RQLRIIRAGRNGFSGVIPSEISGCESLKVLGLAENLLEGSLPKQ 230
Query: 128 IGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYL 186
+ L NL L ++ N L+G IP +G++S L+ LAL N+ G IP IG L+ + LYL
Sbjct: 231 LEKLQNLTDLILWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYL 290
Query: 187 YNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQE 246
Y N L G IP IGNL + + +N L G IP FG++ L L L N L G IP+E
Sbjct: 291 YTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRE 350
Query: 247 IGNLKLLTDLSLSQNQLRGTVPXXXXXXXXXXXXXXYDNQLSGHIPQEIGNFMNLNSLSV 306
+G L LL L LS N+L GT+P +DNQL G IP IG + N + L +
Sbjct: 351 LGELTLLEKLDLSINRLNGTIPQELQFLPYLVDLQLFDNQLEGKIPPLIGFYSNFSVLDM 410
Query: 307 GGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDD 366
N +G +P + C+ +L S+ N G++P+ L+ C SL ++ L NQL G++ +
Sbjct: 411 SANSLSGPIPAHFCRFQTLILLSLGSNKLSGNIPRDLKTCKSLTKLMLGDNQLTGSLPIE 470
Query: 367 FGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDF 426
NL +L N G +S++ L L++A NN TG IPPEIGN T++ +
Sbjct: 471 LFNLQNLTALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNI 530
Query: 427 SSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEXXXXXXXXXXXXSANRFSKSIPGN 486
SSN L G +P EL + ++ L L+GN+ SG I E S NR + IP +
Sbjct: 531 SSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHS 590
Query: 487 MGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS-ELDLSHNLLRGEIPPEICNLESLEKLN 545
G L +L L + N S+ IP++LGKL L L++SHN L G IP + NL+ LE L
Sbjct: 591 FGDLTRLMELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILY 650
Query: 546 LSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSG 605
L+ N LSG IP + N+ LL +IS N L G +P F+ GN GLC S
Sbjct: 651 LNDNKLSGEIPASIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGNHGLCN--SQ 708
Query: 606 LQPCKALKSYKHVHRKW------RTVLFTVLPXXXXXXXXXXXXXMFVCSQRRKKDSXXX 659
C+ L + W R + T+ + +C ++++
Sbjct: 709 RSHCQPLVPHSDSKLNWLINGSQRQKILTI--TCIVIGSVFLITFLGLCWTIKRREPAFV 766
Query: 660 XXXXXXXXALLSILTYEGK-LVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAV 718
++ + K Y+ ++ + NF E +GRG G+VYKAE+ G+ +AV
Sbjct: 767 ALEDQTKPDVMDSYYFPKKGFTYQGLVDATRNFSEDVVLGRGACGTVYKAEMSGGEVIAV 826
Query: 719 KKLHSFTGE-TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARI 777
KKL+S GE + F +EI L +RHRNIVK YGFC H + L+YEY+ +GSL
Sbjct: 827 KKLNS-RGEGASSDNSFRAEISTLGKIRHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQ 885
Query: 778 LS-SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDF 836
L E +DW+ R + G A L Y+HH+CRP IVHRD+ S N+LLD ++AHV DF
Sbjct: 886 LQRGEKNCLLDWNARYRIALGAAEGLCYLHHDCRPQIVHRDIKSNNILLDERFQAHVGDF 945
Query: 837 GTAKLLKPD-SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP---- 891
G AKL+ S + S +AG+YGY+APE AYTMKVTEKCD+YSFGV+ LE+I G+ P
Sbjct: 946 GLAKLIDLSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKPPVQPL 1005
Query: 892 KXXXXXXXXXXXPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERR 951
+ NM I+ MFDARL + ++ ++++AL C +P R
Sbjct: 1006 EQGGDLVNWVRRSIRNMIPTIE-MFDARLDTN--DKRTVHEMSLVLKIALFCTSNSPASR 1062
Query: 952 PNMQIVCKLLS 962
P M+ V +++
Sbjct: 1063 PTMREVVAMIT 1073
|
|
| TAIR|locus:2120362 GSO1 "GASSHO1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 308/879 (35%), Positives = 451/879 (51%)
Query: 3 LNVASNSI--EAARGL-----LKWKATLQNHNNSLLPS--------WTLDPVNATNIT-- 45
LN+A+NS+ E L L++ + + N L+P TLD ++A N+T
Sbjct: 244 LNLANNSLTGEIPSQLGEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLD-LSANNLTGE 302
Query: 46 TPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIG 105
P + +S +++ + L + L G+L + S ++L L L+ QL G IP +
Sbjct: 303 IPEEFWNMS-----QLLDLVLANNHLSGSLPKSICSNNTNLEQLVLSGTQLSGEIPVELS 357
Query: 106 NLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSI-PEIGHLSSLKNLALDG 164
LK L+LS+N +G IP + L L L++ N L G++ P I +L++L+ L L
Sbjct: 358 KCQSLKQLDLSNNSLAGSIPEALFELVELTDLYLHNNTLEGTLSPSISNLTNLQWLVLYH 417
Query: 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFG 224
N+L+G +P I L L L+LY N G IP IGN ++L + + NH G IP S G
Sbjct: 418 NNLEGKLPKEISALRKLEVLFLYENRFSGEIPQEIGNCTSLKMIDMFGNHFEGEIPPSIG 477
Query: 225 YLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPXXXXXXXXXXXXXXYD 284
L++L L L N+L G +P +GN L L L+ NQL G++P Y+
Sbjct: 478 RLKELNLLHLRQNELVGGLPASLGNCHQLNILDLADNQLSGSIPSSFGFLKGLEQLMLYN 537
Query: 285 NQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLR 344
N L G++P + + NL +++ N+ G + +C S S F V +N F +P L
Sbjct: 538 NSLQGNLPDSLISLRNLTRINLSHNRLNGTI-HPLCGSSSYLSFDVTNNGFEDEIPLELG 596
Query: 345 NCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAG 404
N +L+R+RL KNQL G I G L L D+S N G + C +L + +
Sbjct: 597 NSQNLDRLRLGKNQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNN 656
Query: 405 NNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEXX 464
N ++G IPP +G +QL EL SSN V +P EL N T L L L+GN L+G IP E
Sbjct: 657 NFLSGPIPPWLGKLSQLGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQEIG 716
Query: 465 XXXXXXXXXXSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQL-SELDLS 523
N+FS S+P MG L KL+ L +S N + EIP+++G+L L S LDLS
Sbjct: 717 NLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSALDLS 776
Query: 524 HNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIE 583
+N G+IP I L LE L+LSHN L+G +P + +M L +++S+N L G + +
Sbjct: 777 YNNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGGKLK--K 834
Query: 584 AFRHAPVEALQGNKGLCGEVSGLQPCKALKSY-KHVHRKWRTV-LFTVLPXXXXXXXXXX 641
F P ++ GN GLCG S L C ++S K R+V + + +
Sbjct: 835 QFSRWPADSFLGNTGLCG--SPLSRCNRVRSNNKQQGLSARSVVIISAISALTAIGLMIL 892
Query: 642 XXXMFVCSQRR---KK---DSXXXXXXXXXXXALLSILTYEGK----LVYEEIIRSINNF 691
+F QR KK S A L G + +E+I+ + +N
Sbjct: 893 VIALFF-KQRHDFFKKVGHGSTAYTSSSSSSQATHKPLFRNGASKSDIRWEDIMEATHNL 951
Query: 692 DESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
E F IG GG G VYKAEL +G+TVAVKK+ + + K F E+K L +RHR++VK
Sbjct: 952 SEEFMIGSGGSGKVYKAELENGETVAVKKI-LWKDDLMSNKSFSREVKTLGRIRHRHLVK 1010
Query: 752 FYGFCSHARH--SFLVYEYLERGSLARILSSETAT-E-----MDWSKRVNVIKGVAHALS 803
G+CS + L+YEY++ GS+ L + E +DW R+ + G+A +
Sbjct: 1011 LMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVE 1070
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842
Y+HH+C PPIVHRD+ S NVLLD EAH+ DFG AK+L
Sbjct: 1071 YLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVL 1109
|
|
| TAIR|locus:2085949 AT3G24240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 833 (298.3 bits), Expect = 3.2e-134, Sum P(2) = 3.2e-134
Identities = 205/533 (38%), Positives = 279/533 (52%)
Query: 59 GRIISINLTSTSLKGTLDQFPFSL--FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLS 116
G + + + S G + P+SL +L L LN NQL G IP I +KLK L L
Sbjct: 126 GDCLGLKVLDLSSNGLVGDIPWSLSKLRNLETLILNSNQLTGKIPPDISKCSKLKSLILF 185
Query: 117 SNHFSGKIPSEIGLLTNLEVLHMFVN-HLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVS 174
N +G IP+E+G L+ LEV+ + N ++G IP EIG S+L L L + G +P S
Sbjct: 186 DNLLTGSIPTELGKLSGLEVIRIGGNKEISGQIPSEIGDCSNLTVLGLAETSVSGNLPSS 245
Query: 175 IGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLEL 234
+G L L L +Y + G IPS +GN S LV LFL +N L G IP G L KL +L L
Sbjct: 246 LGKLKKLETLSIYTTMISGEIPSDLGNCSELVDLFLYENSLSGSIPREIGQLTKLEQLFL 305
Query: 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPXXXXXXXXXXXXXXYDNQLSGHIPQE 294
N L G IP+EIGN L + LS N L G++P DN+ SG IP
Sbjct: 306 WQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPSSIGRLSFLEEFMISDNKFSGSIPTT 365
Query: 295 IGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRL 354
I N +L L + NQ +G +P + L F N GS+P L +CT L+ + L
Sbjct: 366 ISNCSSLVQLQLDKNQISGLIPSELGTLTKLTLFFAWSNQLEGSIPPGLADCTDLQALDL 425
Query: 355 EKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPE 414
+N L G I + NL L N G + NC L L++ N ITG IP
Sbjct: 426 SRNSLTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIGNCSSLVRLRLGFNRITGEIPSG 485
Query: 415 IGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEXXXXXXXXXXXX 474
IG+ +++ LDFSSN L GKVP E+ + + L + L+ N L G +P
Sbjct: 486 IGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSNNSLEGSLPNPVSSLSGLQVLDV 545
Query: 475 SANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPE 534
SAN+FS IP ++G L+ L+ L +S N FS IP LG L LDL N L GEIP E
Sbjct: 546 SANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSGEIPSE 605
Query: 535 ICNLESLE-KLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDG---PIPSIE 583
+ ++E+LE LNLS N L+G IP+ +++ L +D+S+N L+G P+ +IE
Sbjct: 606 LGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEGDLAPLANIE 658
|
|
| TAIR|locus:2120412 BAM3 "BARELY ANY MERISTEM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 807 (289.1 bits), Expect = 6.0e-133, Sum P(2) = 6.0e-133
Identities = 203/607 (33%), Positives = 305/607 (50%)
Query: 10 IEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIIS-INLTS 68
I A L+ K + +++ SL SW N N + C+W+G+SC++ + I+ ++L++
Sbjct: 32 IRQANVLISLKQSFDSYDPSL-DSW-----NIPNFNSLCSWTGVSCDNLNQSITRLDLSN 85
Query: 69 TSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSE- 127
++ GT+ L L +LD++ N G +P I L+ L+ LN+SSN F G++ +
Sbjct: 86 LNISGTISPEISRLSPSLVFLDISSNSFSGELPKEIYELSGLEVLNISSNVFEGELETRG 145
Query: 128 IGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYL 186
+T L L + N NGS+P + L+ L++L L GN+ DG IP S G+ SL L L
Sbjct: 146 FSQMTQLVTLDAYDNSFNGSLPLSLTTLTRLEHLDLGGNYFDGEIPRSYGSFLSLKFLSL 205
Query: 187 YNNSLPGSIPSSIGNLSNLVYLFLKK-NHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQ 245
N L G IP+ + N++ LV L+L N RG IP+ FG L L L+L+N L GSIP
Sbjct: 206 SGNDLRGRIPNELANITTLVQLYLGYYNDYRGGIPADFGRLINLVHLDLANCSLKGSIPA 265
Query: 246 EIGNLKLLTDLSLSQNQLRGTVPXXXXXXXXXXXXXXYDNQLSGHIPQEIGNFMNLNSLS 305
E+GNLK L L L N+L G+VP +N L G IP E+ L +
Sbjct: 266 ELGNLKNLEVLFLQTNELTGSVPRELGNMTSLKTLDLSNNFLEGEIPLELSGLQKLQLFN 325
Query: 306 VGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISD 365
+ N+ G +P+ + + LQ + N F G +P L + +L + L N+L G I +
Sbjct: 326 LFFNRLHGEIPEFVSELPDLQILKLWHNNFTGKIPSKLGSNGNLIEIDLSTNKLTGLIPE 385
Query: 366 DFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELD 425
LK+ L N +G L + C L ++ N +T +P + L L+
Sbjct: 386 SLCFGRRLKILILFNNFLFGPLPEDLGQCEPLWRFRLGQNFLTSKLPKGLIYLPNLSLLE 445
Query: 426 FSSNHLVGKVPLELAN---LTSLNDLILNGNQLSGGIPPEXXXXXXXXXXXXSANRFSKS 482
+N L G++P E A +SL + L+ N+LSG IP ANR S
Sbjct: 446 LQNNFLTGEIPEEEAGNAQFSSLTQINLSNNRLSGPIPGSIRNLRSLQILLLGANRLSGQ 505
Query: 483 IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLE 542
IPG +G L L ++MS N FS + P + G + L+ LDLSHN + G+IP +I + L
Sbjct: 506 IPGEIGSLKSLLKIDMSRNNFSGKFPPEFGDCMSLTYLDLSHNQISGQIPVQISQIRILN 565
Query: 543 KLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGE 602
LN+S N+ + S+P M L S D S+N G +P+ F + + GN LCG
Sbjct: 566 YLNVSWNSFNQSLPNELGYMKSLTSADFSHNNFSGSVPTSGQFSYFNNTSFLGNPFLCGF 625
Query: 603 VSGLQPC 609
S PC
Sbjct: 626 SSN--PC 630
|
|
| TAIR|locus:2097310 BAM2 "BARELY ANY MERISTEM 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 791 (283.5 bits), Expect = 6.0e-133, Sum P(2) = 6.0e-133
Identities = 200/607 (32%), Positives = 299/607 (49%)
Query: 17 LKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGR-IISINLTSTSLKGTL 75
LK T+ H+ LL SW L TT C+W+G++C+ + R + S++L+ +L GTL
Sbjct: 34 LKSSFTIDEHS-PLLTSWNLS-------TTFCSWTGVTCDVSLRHVTSLDLSGLNLSGTL 85
Query: 76 DQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGL-LTNL 134
L L L L NQ+ G IP I NL +L+ LNLS+N F+G P E+ L NL
Sbjct: 86 SSDVAHL-PLLQNLSLAANQISGPIPPQISNLYELRHLNLSNNVFNGSFPDELSSGLVNL 144
Query: 135 EVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG 193
VL ++ N+L G +P + +L+ L++L L GN+ G IP + G L L + N L G
Sbjct: 145 RVLDLYNNNLTGDLPVSLTNLTQLRHLHLGGNYFSGKIPATYGTWPVLEYLAVSGNELTG 204
Query: 194 SIPSSIGNLSNLVYLFLKK-NHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKL 252
IP IGNL+ L L++ N +P G L +L + + +N L+G IP EIG L+
Sbjct: 205 KIPPEIGNLTTLRELYIGYYNAFENGLPPEIGNLSELVRFDAANCGLTGEIPPEIGKLQK 264
Query: 253 LTDLSLSQNQLRGTVPXXXXXXXXXXXXXXYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312
L L L N GT+ +N +G IP NL L++ N+
Sbjct: 265 LDTLFLQVNAFTGTITQELGLISSLKSMDLSNNMFTGEIPTSFSQLKNLTLLNLFRNKLY 324
Query: 313 GFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPN 372
G +P+ I + L+ + +N F GS+P+ L L + L N+L G + +
Sbjct: 325 GAIPEFIGEMPELEVLQLWENNFTGSIPQKLGENGRLVILDLSSNKLTGTLPPNMCSGNR 384
Query: 373 LKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLV 432
L N +G + + C L +++ N + G IP E+ +L +++ N+L
Sbjct: 385 LMTLITLGNFLFGSIPDSLGKCESLTRIRMGENFLNGSIPKELFGLPKLSQVELQDNYLT 444
Query: 433 GKVPLELANLTS-LNDLILNGNQLSGGIPPEXXXXXXXXXXXXSANRFSKSIPGNMGYLL 491
G++P+ ++ L + L+ NQLSG +P N+FS SIP +G L
Sbjct: 445 GELPISGGGVSGDLGQISLSNNQLSGSLPAAIGNLSGVQKLLLDGNKFSGSIPPEIGRLQ 504
Query: 492 KLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNL 551
+L L+ S N FS I ++ + L+ +DLS N L G+IP E+ ++ L LNLS N+L
Sbjct: 505 QLSKLDFSHNLFSGRIAPEISRCKLLTFVDLSRNELSGDIPNELTGMKILNYLNLSRNHL 564
Query: 552 SGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPCKA 611
GSIP +M L S+D SYN L G +PS F + + GN LCG G PC
Sbjct: 565 VGSIPVTIASMQSLTSVDFSYNNLSGLVPSTGQFSYFNYTSFVGNSHLCGPYLG--PCGK 622
Query: 612 LKSYKHV 618
HV
Sbjct: 623 GTHQSHV 629
|
|
| TAIR|locus:2156349 GSO2 "GASSHO 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
Identities = 304/845 (35%), Positives = 445/845 (52%)
Query: 66 LTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIP 125
L L G+L + S + L L L+E QL G IP+ I N LK L+LS+N +G+IP
Sbjct: 319 LAKNRLSGSLPKTICSNNTSLKQLFLSETQLSGEIPAEISNCQSLKLLDLSNNTLTGQIP 378
Query: 126 SEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGL 184
+ L L L++ N L G++ I +L++L+ L N+L+G +P IG L L +
Sbjct: 379 DSLFQLVELTNLYLNNNSLEGTLSSSISNLTNLQEFTLYHNNLEGKVPKEIGFLGKLEIM 438
Query: 185 YLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244
YLY N G +P IGN + L + N L G IPSS G L+ LT+L L N+L G+IP
Sbjct: 439 YLYENRFSGEMPVEIGNCTRLQEIDWYGNRLSGEIPSSIGRLKDLTRLHLRENELVGNIP 498
Query: 245 QEIGNLKLLTDLSLSQNQLRGTVPXXXXXXXXXXXXXXYDNQLSGHIPQEIGNFMNLNSL 304
+GN +T + L+ NQL G++P Y+N L G++P + N NL +
Sbjct: 499 ASLGNCHQMTVIDLADNQLSGSIPSSFGFLTALELFMIYNNSLQGNLPDSLINLKNLTRI 558
Query: 305 SVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS 364
+ N+F G + +C S S F V +N F G +P L T+L+R+RL KNQ G I
Sbjct: 559 NFSSNKFNGSISP-LCGSSSYLSFDVTENGFEGDIPLELGKSTNLDRLRLGKNQFTGRIP 617
Query: 365 DDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHEL 424
FG L L D+S N G + C +L + + N ++G IP +G L EL
Sbjct: 618 RTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGEL 677
Query: 425 DFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEXXXXXXXXXXXXSANRFSKSIP 484
SSN VG +P E+ +LT++ L L+GN L+G IP E N+ S +P
Sbjct: 678 KLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGPLP 737
Query: 485 GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQL-SELDLSHNLLRGEIPPEICNLESLEK 543
+G L KL L +S N + EIP+++G+L L S LDLS+N G IP I L LE
Sbjct: 738 STIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKLES 797
Query: 544 LNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEV 603
L+LSHN L G +P +M L +++SYN L+G + + F +A GN GLCG
Sbjct: 798 LDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLK--KQFSRWQADAFVGNAGLCG-- 853
Query: 604 SGLQPCKALKSYKHVHRKWRTV-LFTVLPXXXXXXXXXXXXXMF------VCSQRRKKDS 656
S L C S +TV + + + +F + + R +S
Sbjct: 854 SPLSHCNRAGSKNQRSLSPKTVVIISAISSLAAIALMVLVIILFFKQNHDLFKKVRGGNS 913
Query: 657 XXXXXXXXXXXALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTV 716
L S + + +++I+ + + +E F IG GG G VYKAEL +G+T+
Sbjct: 914 AFSSNSSSSQAPLFSNGGAKSDIKWDDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETI 973
Query: 717 AVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH--SFLVYEYLERGSL 774
AVKK+ + + K F E+K L +RHR++VK G+CS + L+YEY+ GS+
Sbjct: 974 AVKKI-LWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSV 1032
Query: 775 ARILSSETATE----MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE 830
L + T+ + W R+ + G+A + Y+H++C PPIVHRD+ S NVLLD E
Sbjct: 1033 WDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIE 1092
Query: 831 AHVSDFGTAKLLKP--DSSNWSE--LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 886
AH+ DFG AK+L D++ S AG+YGY+APE AY++K TEK DVYS G++ +E++
Sbjct: 1093 AHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIV 1152
Query: 887 KGQHP 891
G+ P
Sbjct: 1153 TGKMP 1157
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8VZG8 | Y4885_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.4826 | 0.9709 | 0.8956 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| AT4G08850 | kinase; kinase; FUNCTIONS IN- kinase activity; INVOLVED IN- protein amino acid phosphorylation; LOCATED IN- plasma membrane, membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein kinase, ATP binding site (InterPro-IPR017441), Protein kinase, core (InterPro-IPR000719), Leucine-rich repeat, N-terminal (InterPro-IPR013210), Tyrosine protein kinase, active site (InterPro-IPR008266), Leucine-rich repeat (InterPro-IPR001611), Serine/threonine protein kinase-related (InterPro-IPR017442), Protein kinase-like (InterPro-IPR011009); B [...] (1045 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Rps2 | RPS2 (RESISTANT TO P. SYRINGAE 2); protein binding; Encodes a plasma membrane protein with leuc [...] (909 aa) | • | • | • | 0.878 | ||||||
| AT2G31880 | leucine-rich repeat transmembrane protein kinase, putative; Encodes a putative leucine rich rep [...] (641 aa) | • | • | 0.754 | |||||||
| AT5G48380 | leucine-rich repeat family protein / protein kinase family protein; leucine-rich repeat family [...] (620 aa) | • | • | 0.704 | |||||||
| EDA39 | EDA39 (embryo sac development arrest 39); calmodulin binding; embryo sac development arrest 39 [...] (526 aa) | • | 0.696 | ||||||||
| RPP13L4 | disease resistance protein (CC-NBS-LRR class), putative; disease resistance protein (CC-NBS-LRR [...] (852 aa) | • | 0.645 | ||||||||
| AT2G39210 | nodulin family protein; nodulin family protein; FUNCTIONS IN- molecular_function unknown; INVOL [...] (601 aa) | • | 0.641 | ||||||||
| PEN3 | PEN3 (PENETRATION 3); ATPase, coupled to transmembrane movement of substances / cadmium ion tra [...] (1469 aa) | • | 0.631 | ||||||||
| DL3220C | zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein; zinc finge [...] (376 aa) | • | 0.625 | ||||||||
| AT1G19380 | unknown protein; unknown protein; INVOLVED IN- biological_process unknown; EXPRESSED IN- 24 pla [...] (147 aa) | • | • | 0.614 | |||||||
| AT4G38550 | unknown protein; LOCATED IN- chloroplast; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- [...] (612 aa) | • | 0.605 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 964 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-148 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-46 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 3e-45 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-43 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 3e-43 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 7e-43 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-42 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-40 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 2e-36 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-35 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-30 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 8e-30 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 1e-28 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-27 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 6e-27 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 8e-27 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 5e-26 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 1e-25 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 5e-25 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 1e-24 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 5e-24 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-24 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 1e-23 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 3e-23 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 3e-23 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 1e-22 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-22 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 2e-22 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 3e-22 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 3e-22 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 6e-22 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-21 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 2e-21 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-21 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-21 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 2e-21 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 3e-21 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 3e-21 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 4e-21 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 1e-20 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-20 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 1e-20 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 1e-20 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-20 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 2e-20 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 2e-20 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 2e-20 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 7e-20 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 8e-20 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 8e-20 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 1e-19 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 1e-19 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-19 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-19 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-19 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 3e-19 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 4e-19 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 5e-19 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 5e-19 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 6e-19 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 9e-19 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 1e-18 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 1e-18 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 3e-18 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 3e-18 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 3e-18 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 4e-18 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 4e-18 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 4e-18 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 4e-18 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 5e-18 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 5e-18 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 5e-18 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 6e-18 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 8e-18 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 9e-18 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 1e-17 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 1e-17 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 1e-17 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 1e-17 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 2e-17 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 3e-17 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 4e-17 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 5e-17 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 5e-17 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 6e-17 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 8e-17 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 1e-16 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-16 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-16 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-16 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 3e-16 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 4e-16 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 5e-16 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 6e-16 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 6e-16 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-16 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 2e-15 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-15 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 2e-15 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-15 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 3e-15 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 3e-15 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 4e-15 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 4e-15 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-15 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 6e-15 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 7e-15 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 7e-15 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 8e-15 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 1e-14 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 1e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-14 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 2e-14 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-14 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 3e-14 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 3e-14 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 5e-14 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 5e-14 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 6e-14 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 7e-14 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 8e-14 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 9e-14 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-13 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 1e-13 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 1e-13 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 2e-13 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-13 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 2e-13 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 2e-13 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-13 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 3e-13 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 3e-13 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 4e-13 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 4e-13 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 4e-13 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 5e-13 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 5e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-13 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 7e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 9e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-12 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 1e-12 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 1e-12 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-12 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 1e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-12 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 2e-12 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 2e-12 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 2e-12 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 2e-12 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 2e-12 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 3e-12 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 3e-12 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 4e-12 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 5e-12 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 6e-12 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 6e-12 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 8e-12 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 8e-12 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 9e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-11 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 1e-11 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 1e-11 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 1e-11 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 1e-11 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 2e-11 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 2e-11 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 2e-11 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 3e-11 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 3e-11 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 4e-11 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 4e-11 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 5e-11 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 6e-11 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 7e-11 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 8e-11 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 9e-11 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 9e-11 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 1e-10 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 1e-10 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 1e-10 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 1e-10 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 1e-10 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-10 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 2e-10 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 2e-10 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 2e-10 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 2e-10 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 2e-10 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 2e-10 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 3e-10 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 3e-10 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 3e-10 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 3e-10 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 3e-10 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 4e-10 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 4e-10 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 4e-10 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 6e-10 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 6e-10 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 6e-10 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 7e-10 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 7e-10 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 7e-10 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 8e-10 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 8e-10 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 9e-10 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-09 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 1e-09 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 1e-09 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 1e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-09 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-09 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 2e-09 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 2e-09 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 2e-09 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 2e-09 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 3e-09 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 3e-09 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 3e-09 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 3e-09 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 3e-09 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 4e-09 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 5e-09 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 5e-09 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 6e-09 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 6e-09 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 7e-09 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 8e-09 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 8e-09 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 8e-09 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 9e-09 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 1e-08 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 1e-08 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 2e-08 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 2e-08 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 2e-08 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 2e-08 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 2e-08 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 2e-08 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 2e-08 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 2e-08 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 3e-08 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 4e-08 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 4e-08 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 4e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-08 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 6e-08 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 6e-08 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 1e-07 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 1e-07 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 1e-07 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 1e-07 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 1e-07 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 2e-07 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 2e-07 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 2e-07 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 2e-07 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 2e-07 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 2e-07 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-07 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 3e-07 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 3e-07 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 3e-07 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 3e-07 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 3e-07 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 3e-07 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 3e-07 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 5e-07 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 5e-07 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 6e-07 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 6e-07 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 7e-07 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 7e-07 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 8e-07 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 9e-07 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 1e-06 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 1e-06 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 2e-06 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 2e-06 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 2e-06 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 3e-06 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 3e-06 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 3e-06 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 3e-06 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 3e-06 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-06 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 4e-06 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 5e-06 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 6e-06 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 6e-06 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 6e-06 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 7e-06 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 7e-06 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 8e-06 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 9e-06 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 1e-05 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-05 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 2e-05 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 2e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 3e-05 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 3e-05 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 3e-05 | |
| PHA02882 | 294 | PHA02882, PHA02882, putative serine/threonine kina | 4e-05 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 4e-05 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 5e-05 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 6e-05 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 8e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-04 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 2e-04 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 2e-04 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 2e-04 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 2e-04 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 3e-04 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 3e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 5e-04 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 6e-04 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 7e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 8e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.001 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 0.001 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 0.002 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 0.002 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 0.002 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 0.002 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 463 bits (1193), Expect = e-148
Identities = 327/1001 (32%), Positives = 485/1001 (48%), Gaps = 141/1001 (14%)
Query: 16 LLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIIS------------ 63
LL +K+++ + P L N++ C W GI+CN++ R++S
Sbjct: 34 LLSFKSSIND------PLKYLSNWNSSA--DVCLWQGITCNNSSRVVSIDLSGKNISGKI 85
Query: 64 ------------INLTSTSLKGTLDQFPFSLFSHLSYL---------------------- 89
INL++ L G + F+ S L YL
Sbjct: 86 SSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETL 145
Query: 90 DLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP 149
DL+ N L G IP+ IG+ + LK L+L N GKIP+ + LT+LE L + N L G IP
Sbjct: 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIP 205
Query: 150 -EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYL 208
E+G + SLK + L N+L G IP IG L+SL L L N+L G IPSS+GNL NL YL
Sbjct: 206 RELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYL 265
Query: 209 FLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVP 268
FL +N L GPIP S L+KL L+LS+N LSG IP+ + L+ L L L N G +P
Sbjct: 266 FLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP 325
Query: 269 SSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYF 328
+L++L L++L L+ N+ SG IP+ +G NL L + N TG +P+ +C SG+L
Sbjct: 326 VALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKL 385
Query: 329 SVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELS 388
+ N G +PK+L C SL RVRL+ N G + +F P + D+S N G ++
Sbjct: 386 ILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRIN 445
Query: 389 SNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDL 448
S W+ P L +L +A N GG+P G + +L LD S N G VP +L +L+ L L
Sbjct: 446 SRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQL 504
Query: 449 ILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIP 508
L+ N+LSG IP EL L LDLS N+ S IP + FS E+P
Sbjct: 505 KLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPAS----------------FS-EMP 547
Query: 509 IQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSI 568
+ LS+LDLS N L GEIP + N+ESL ++N+SHN+L GS
Sbjct: 548 V-------LSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGS-------------- 586
Query: 569 DISYNELDGPIPSIEAFRHAPVEALQGNKGLCGE--VSGLQPCKALKSYKHVHRKWRTVL 626
+PS AF A+ GN LCG SGL PCK + RK +
Sbjct: 587 ----------LPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV-------RKTPSWW 629
Query: 627 FTVLPLLAALALIIGLIGMFVCSQRRKKDSQ----EQEENNRNNQALLSILTYEGKLVYE 682
F + L A L++ L+ R + + + E E+ Q S +
Sbjct: 630 FYITCTLGAF-LVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDS--KVSKSITIN 686
Query: 683 EIIRSINNFDESFCIGRGGYGSVYKAELPSGDT-VAVKKLHSFTGETTHQKEFLSEIKAL 741
+I+ S+ E I RG G+ YK + VK+++ SEI +
Sbjct: 687 DILSSLK---EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP------SSEIADM 737
Query: 742 TGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHA 801
++H NIVK G C + ++L++EY+E +L+ +L + + W +R + G+A A
Sbjct: 738 GKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKA 792
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAP 861
L ++H C P +V ++S + +++D + E H+ LL D+ + A YVAP
Sbjct: 793 LRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSA----YVAP 847
Query: 862 ELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921
E T +TEK D+Y FG++ +E++ G+ P D + S + A + H+ P
Sbjct: 848 ETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDP 907
Query: 922 PPWLEVGV-EDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+V V ++++ ++ +AL C +P RP V K L
Sbjct: 908 SIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 3e-46
Identities = 74/267 (27%), Positives = 120/267 (44%), Gaps = 19/267 (7%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G G +G+VYKA +G VAVK L + ++ + EI+ L + H NIV+
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
H +LV EY E G L LS + + + + L Y+H I+
Sbjct: 66 AFEDKDHLYLVMEYCEGGDLFDYLSRGGP--LSEDEAKKIALQILRGLEYLHSN---GII 120
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTMKVTEKC 873
HRD+ +N+LLD ++DFG AK L SS+ + GT Y+APE L K
Sbjct: 121 HRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKV 180
Query: 874 DVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV-GVEDK 932
DV+S GV+ E++ G+ P S + + I + L + ++
Sbjct: 181 DVWSLGVILYELLTGKPPF--------SGENILDQLQLIRRILGPPLEFDEPKWSSGSEE 232
Query: 933 LKSIIEVALSCVDANPERRPNMQIVCK 959
K +I+ C++ +P +RP + + +
Sbjct: 233 AKDLIK---KCLNKDPSKRPTAEEILQ 256
|
Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 3e-45
Identities = 72/258 (27%), Positives = 118/258 (45%), Gaps = 23/258 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G +G VY A + +G VA+K + ++ L EIK L ++H NIV+ Y
Sbjct: 7 LGEGSFGKVYLARDKKTGKLVAIKVIK-KKKIKKDRERILREIKILKKLKHPNIVRLYDV 65
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+LV EY E G L +L D ++ ++ + AL Y+H + IVH
Sbjct: 66 FEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARF--YLRQILSALEYLHSKG---IVH 120
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDV 875
RD+ +N+LLD + ++DFG A+ L P + GT Y+APE+ + D+
Sbjct: 121 RDLKPENILLDEDGHVKLADFGLARQLDPGEKLTT-FVGTPEYMAPEVLLGKGYGKAVDI 179
Query: 876 YSFGVLALEVIKGQHPKDLLSSLSDSSLPGA-NMNEAIDHMFDARLPPPWLEVGVEDKLK 934
+S GV+ E++ G+ P PG + E + + P P E + + K
Sbjct: 180 WSLGVILYELLTGKPP-----------FPGDDQLLELFKKIGKPKPPFPPPEWDISPEAK 228
Query: 935 SIIEVALSCVDANPERRP 952
+I + +PE+R
Sbjct: 229 DLIR---KLLVKDPEKRL 243
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 158 bits (403), Expect = 1e-43
Identities = 73/272 (26%), Positives = 116/272 (42%), Gaps = 27/272 (9%)
Query: 697 IGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G VYK L VAVK L +EFL E + + + H NIVK
Sbjct: 7 LGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKE-DASEQQIEEFLREARIMRKLDHPNIVK 65
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G C+ +V EY+ G L L E+ S ++ +A + Y+ +
Sbjct: 66 LLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK--- 122
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA-GTYGYVAPELAYTMKVT 870
+HRD++++N L+ +SDFG ++ L D + ++APE K T
Sbjct: 123 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFT 182
Query: 871 EKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929
K DV+SFGVL E+ G+ P + A + E + + RLP P
Sbjct: 183 SKSDVWSFGVLLWEIFTLGEEPYP--------GMSNAEVLEYLKKGY--RLPKP------ 226
Query: 930 EDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+ + ++ L C +PE RP + ++L
Sbjct: 227 PNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 3e-43
Identities = 77/276 (27%), Positives = 119/276 (43%), Gaps = 36/276 (13%)
Query: 697 IGRGGYGSVYKAEL-PSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G VYK L G+ VAVK L E ++EFL E + + H NIV+
Sbjct: 7 LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEE-EREEFLEEASIMKKLSHPNIVR 65
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G C+ ++V EY+ G L L + + + +A + Y+
Sbjct: 66 LLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEK-LTLKDLLQMALQIAKGMEYLE---SK 121
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-----APELAYT 866
VHRD++++N L+ +SDFG ++ + D G + APE
Sbjct: 122 NFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDD---YYRKRGGGKLPIKWMAPESLKD 178
Query: 867 MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD-ARLPPPWL 925
K T K DV+SFGVL E+ +L + PG + E ++ + D RLP P
Sbjct: 179 GKFTSKSDVWSFGVLLWEIF----------TLGEQPYPGMSNEEVLELLEDGYRLPRP-- 226
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
D+L ++ L C +PE RP ++V L
Sbjct: 227 -ENCPDELYELM---LQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 7e-43
Identities = 66/191 (34%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G GG+G+VY A +G VA+K + ++ +E L EI+ L + H NIVK YG
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKII-KKEDSSSLLEELLREIEILKKLNHPNIVKLYGV 59
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
H +LV EY E GSL +L ++ + + ++ + L Y+H I+H
Sbjct: 60 FEDENHLYLVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIH 115
Query: 816 RDVSSKNVLLDF-EYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTMKVTEKC 873
RD+ +N+LLD + ++DFG +KLL D S + GT Y+APE L +EK
Sbjct: 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175
Query: 874 DVYSFGVLALE 884
D++S GV+ E
Sbjct: 176 DIWSLGVILYE 186
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 2e-42
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 28/272 (10%)
Query: 697 IGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G VYK +L VAVK L E +EFL E + + + H N+VK
Sbjct: 7 LGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQ-QIEEFLREARIMRKLDHPNVVK 65
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G C+ ++V EY+E G L L + ++ S ++ +A + Y+ +
Sbjct: 66 LLGVCTEEEPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSFALQIARGMEYLESK--- 121
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA-GTYGYVAPELAYTMKVT 870
+HRD++++N L+ +SDFG ++ L D ++APE K T
Sbjct: 122 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFT 181
Query: 871 EKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929
K DV+SFGVL E+ G+ P + + E + + + RLP P
Sbjct: 182 SKSDVWSFGVLLWEIFTLGEQPYP--------GMSNEEVLEYLKNGY--RLPQP------ 225
Query: 930 EDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+ + ++ L C +PE RP + ++L
Sbjct: 226 PNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 149 bits (380), Expect = 2e-40
Identities = 76/289 (26%), Positives = 121/289 (41%), Gaps = 54/289 (18%)
Query: 697 IGRGGYGSVYKAELPSGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G +G VYK +L D VAVK L +K+FL E + + + H N+V+
Sbjct: 3 LGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDA-SEEERKDFLKEARVMKKLGHPNVVRL 61
Query: 753 YGFCSHARHSFLVYEYLERGSL-------ARILSSETATEMDWSKRVNVIKGVAHALSYM 805
G C+ +LV EY+E G L + S + + ++ +A + Y+
Sbjct: 62 LGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL 121
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN-----------WSELAG 854
+ VHRD++++N L+ + +SDFG ++ + D W
Sbjct: 122 ASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRW----- 173
Query: 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAID 913
+APE T K DV+SFGVL E+ G P PG + E ++
Sbjct: 174 ----MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATP-----------YPGLSNEEVLE 218
Query: 914 HMFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
++ RLP P E + E+ LSC +PE RP + + L
Sbjct: 219 YLRKGYRLPKP------EYCPDELYELMLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 2e-36
Identities = 78/262 (29%), Positives = 129/262 (49%), Gaps = 30/262 (11%)
Query: 696 CIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
IG+GG+G VYKA +G VA+K + +++ ++EI+ L +H NIVK+YG
Sbjct: 7 KIGKGGFGEVYKARHKRTGKEVAIKVIK--LESKEKKEKIINEIQILKKCKHPNIVKYYG 64
Query: 755 FCSHARHSFLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
++V E+ GSL +L S +T TE + V K + L Y+H
Sbjct: 65 SYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAY---VCKELLKGLEYLHSN---G 118
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEK 872
I+HRD+ + N+LL + E + DFG + L D+ + + GT ++APE+ K
Sbjct: 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLS-DTKARNTMVGTPYWMAPEVINGKPYDYK 177
Query: 873 CDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE-- 930
D++S G+ A+E+ +G+ P S+ +A+ + A PP L +
Sbjct: 178 ADIWSLGITAIELAEGKPP------YSEL-----PPMKALFKI--ATNGPPGLRNPEKWS 224
Query: 931 DKLKSIIEVALSCVDANPERRP 952
D+ K ++ C+ NPE+RP
Sbjct: 225 DEFKDFLK---KCLQKNPEKRP 243
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 1e-35
Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 36/269 (13%)
Query: 696 CIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+GRG +GSVY A +G+ +AVK + + EI+ L+ ++H NIV++YG
Sbjct: 7 LLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYG 66
Query: 755 FC-SHARHSFLVY-EYLERGSLARILSSETATEMDWSKRVNVIKGVA----HALSYMHHE 808
+++ ++ EY+ GSL+ +L VI+ L+Y+H
Sbjct: 67 SERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPE------PVIRKYTRQILEGLAYLHSN 120
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE--LAGTYGYVAPELAYT 866
IVHRD+ N+L+D + ++DFG AK L + + GT ++APE+
Sbjct: 121 G---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG 177
Query: 867 MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF--DARLPPPW 924
+ D++S G +E+ G+ P + + + ++ + PP
Sbjct: 178 EEYGRAADIWSLGCTVIEMATGKPPW-------------SELGNPMAALYKIGSSGEPPE 224
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPN 953
+ + ++ K + C+ +P++RP
Sbjct: 225 IPEHLSEEAKDFLR---KCLRRDPKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 2e-30
Identities = 74/259 (28%), Positives = 128/259 (49%), Gaps = 24/259 (9%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V++ + VA+K L S + Q++F E++AL +RH++++ + C
Sbjct: 14 LGSGYFGEVWEGLWKNRVRVAIKILKS--DDLLKQQDFQKEVQALKRLRHKHLISLFAVC 71
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
S +++ E +E+GSL L S + + +++ VA ++Y+ + +HR
Sbjct: 72 SVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHR 128
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVY 876
D++++N+L+ + V+DFG A+L+K D S+ Y + APE A + K DV+
Sbjct: 129 DLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVW 188
Query: 877 SFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDH-MFDARLPPPWLEVGVEDKLK 934
SFG+L E+ GQ P PG N +E D R+P P +
Sbjct: 189 SFGILLYEMFTYGQVP-----------YPGMNNHEVYDQITAGYRMPCP------AKCPQ 231
Query: 935 SIIEVALSCVDANPERRPN 953
I ++ L C A PE RP+
Sbjct: 232 EIYKIMLECWAAEPEDRPS 250
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 8e-30
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 32/265 (12%)
Query: 696 CIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G+G G VYK P+G A+KK+H G+ +K+ L E+K L +VK YG
Sbjct: 8 VLGQGSSGVVYKVRHKPTGKIYALKKIH-VDGDEEFRKQLLRELKTLRSCESPYVVKCYG 66
Query: 755 -FCSHARHSFLVYEYLERGSLARIL-SSETATEMDWSKRVNVIKGVA----HALSYMHHE 808
F S +V EY++ GSLA +L E V+ +A L Y+H +
Sbjct: 67 AFYKEGEIS-IVLEYMDGGSLADLLKKVGKIPE-------PVLAYIARQILKGLDYLHTK 118
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMK 868
I+HRD+ N+L++ + E ++DFG +K+L+ + GT Y++PE
Sbjct: 119 RH--IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGES 176
Query: 869 VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG-ANMNEAIDHMFDARLPPPWLEV 927
+ D++S G+ LE G+ P P + +AI PP
Sbjct: 177 YSYAADIWSLGLTLLECALGKFP------FLPPGQPSFFELMQAI--CDGP--PPSLPAE 226
Query: 928 GVEDKLKSIIEVALSCVDANPERRP 952
+ + I +C+ +P++RP
Sbjct: 227 EFSPEFRDFIS---ACLQKDPKKRP 248
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-28
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 696 CIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
IGRG +G VYK L +GD VA+K++ + K + EI L ++H NIVK+ G
Sbjct: 7 LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIG 66
Query: 755 FCSHARHSFLVYEYLERGSLARILS-------SETATEMDWSKRVNVIKGVAHALSYMHH 807
+ +++ EY E GSL +I+ S A + V++G L+Y+H
Sbjct: 67 SIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYV-----YQVLQG----LAYLHE 117
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
+ ++HRD+ + N+L + ++DFG A L S + + + GT ++APE+
Sbjct: 118 Q---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMS 174
Query: 868 KVTEKCDVYSFGVLALEVIKGQHP 891
+ D++S G +E++ G P
Sbjct: 175 GASTASDIWSLGCTVIELLTGNPP 198
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 2e-27
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 8/196 (4%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G G VYKA + +G VA+KK+ + ++ ++EI + +H NIV +Y
Sbjct: 27 IGEGASGEVYKATDRATGKEVAIKKMR-LRKQN--KELIINEILIMKDCKHPNIVDYYDS 83
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
++V EY++ GSL I++ + M+ + V + V L Y+H ++H
Sbjct: 84 YLVGDELWVVMEYMDGGSLTDIIT-QNFVRMNEPQIAYVCREVLQGLEYLH---SQNVIH 139
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDV 875
RD+ S N+LL + ++DFG A L + S + + GT ++APE+ K D+
Sbjct: 140 RDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDI 199
Query: 876 YSFGVLALEVIKGQHP 891
+S G++ +E+ +G+ P
Sbjct: 200 WSLGIMCIEMAEGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 113 bits (283), Expect = 6e-27
Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 22/271 (8%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKL-HSFTGETTHQKEFLSEIKALTGVRH-RNIVKFYG 754
+G G +G VY A VA+K L ++ + FL EI+ L + H NIVK Y
Sbjct: 8 LGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYD 65
Query: 755 FCSHARHSFLVYEYLERGSLARILSSE-TATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
F +LV EY++ GSL +L + S+ + ++ + AL Y+H + I
Sbjct: 66 FFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---I 122
Query: 814 VHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPDSSN------WSELAGTYGYVAPELAYT 866
+HRD+ +N+LLD + + DFG AKLL S S GT GY+APE+
Sbjct: 123 IHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLG 182
Query: 867 M---KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
+ + D++S G+ E++ G P + + S +S + I + L P
Sbjct: 183 LSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQ----TLKIILELPTPSLASP 238
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNM 954
E K+ ++ + +P+ R +
Sbjct: 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSS 269
|
Length = 384 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 8e-27
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 47/278 (16%)
Query: 687 SINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH 746
+ IG+G +G V + G VAVK L ++T + FL+E +T +RH
Sbjct: 4 NSKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKD---DSTAAQAFLAEASVMTTLRH 59
Query: 747 RNIVKFYGFCSHARHSFLVYEYLERGSLARILSS------ETATEMDWSKRVNVIKGVAH 800
N+V+ G ++V EY+ +GSL L S A ++ ++ V
Sbjct: 60 PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALD------VCE 113
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY--GY 858
+ Y+ + VHRD++++NVL+ + A VSDFG AK ++ + +G +
Sbjct: 114 GMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAK-----EASQGQDSGKLPVKW 165
Query: 859 VAPELAYTMKVTEKCDVYSFGVLALEVI---KGQHPKDLLSSLSDSSLPGANMNEAIDHM 915
APE K + K DV+SFG+L E+ + +P+ L + G M EA +
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM-EAPE-- 222
Query: 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN 953
PP + +V C + +P +RP
Sbjct: 223 ---GCPPE------------VYKVMKDCWELDPAKRPT 245
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 5e-26
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 45/280 (16%)
Query: 697 IGRGGYGSVYKA--ELPSGD--TVAVKKLHSFTGETTHQK-EFLSEIKALTGVRHRNIVK 751
IG G +G V + +LP VA+K L + G + Q+ +FL+E + H NI++
Sbjct: 12 IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKA--GSSDKQRLDFLTEASIMGQFDHPNIIR 69
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G + +R ++ EY+E GSL + L E + + V +++G+A + Y+
Sbjct: 70 LEGVVTKSRPVMIITEYMENGSLDKFL-RENDGKFTVGQLVGMLRGIASGMKYLSEMN-- 126
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG--YVAPE-LAYTMK 868
VHRD++++N+L++ VSDFG ++ L+ + ++ G + APE +AY K
Sbjct: 127 -YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYR-K 184
Query: 869 VTEKCDVYSFGVLALEVIK-GQHP------KDLLSSLSDSSLPGANMNEAIDHMFDARLP 921
T DV+SFG++ EV+ G+ P +D++ ++ D RLP
Sbjct: 185 FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVED----------------GYRLP 228
Query: 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
PP D ++ ++ L C + RP QIV L
Sbjct: 229 PP------MDCPSALYQLMLDCWQKDRNERPTFSQIVSTL 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-25
Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G +G VY A L +G+ +AVK++ + KE E+K L ++H N+VK+YG
Sbjct: 8 IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGV 67
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYMHHECRP 811
H ++ EY G+L +L E +D +VI+ L+Y+ H
Sbjct: 68 EVHREKVYIFMEYCSGGTLEELL--EHGRILD----EHVIRVYTLQLLEGLAYL-HSHG- 119
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE----LAGTYGYVAPELAYTM 867
IVHRD+ N+ LD + DFG A LK +++ E LAGT Y+APE+
Sbjct: 120 -IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGG 178
Query: 868 KVTEK---CDVYSFGVLALEVIKGQHP 891
K D++S G + LE+ G+ P
Sbjct: 179 KGKGHGRAADIWSLGCVVLEMATGKRP 205
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 5e-25
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 26/259 (10%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V+ VAVK L T FL E + + +RH +V+ Y C
Sbjct: 14 LGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPE---AFLQEAQIMKKLRHDKLVQLYAVC 70
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
S ++V EY+ +GSL L S ++ + V++ +A ++Y+ +HR
Sbjct: 71 SEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHR 127
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKCDV 875
D++++N+L+ ++DFG A+L++ D E A + APE A + T K DV
Sbjct: 128 DLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDV 187
Query: 876 YSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDH-MFDARLPPPWLEVGVEDKL 933
+SFG+L E++ G+ P PG E ++ R+P P ++L
Sbjct: 188 WSFGILLTEIVTYGRVP-----------YPGMTNREVLEQVERGYRMPRP---PNCPEEL 233
Query: 934 KSIIEVALSCVDANPERRP 952
++ L C D +PE RP
Sbjct: 234 YDLM---LQCWDKDPEERP 249
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 65/266 (24%), Positives = 119/266 (44%), Gaps = 25/266 (9%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFL-SEIKALTGVRHRNIVKFY 753
IG+G +G+V K G + K++ + T +K+ L SE+ L ++H NIV++Y
Sbjct: 7 TIGKGSFGTVRKVRRKSDGKILVWKEID-YGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65
Query: 754 G-FCSHARHS-FLVYEYLERGSLARILS--SETATEMDWSKRVNVIKGVAHALSYMHH-- 807
+ + ++V EY E G LA+++ + ++ ++ + AL H+
Sbjct: 66 DRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRS 125
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
+ ++HRD+ N+ LD + DFG AK+L DSS GT Y++PE M
Sbjct: 126 DPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHM 185
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
EK D++S G L E+ P N + + + + +
Sbjct: 186 SYDEKSDIWSLGCLIYELCALSPP-----------FTARNQLQLASKIKEGKFRR--IPY 232
Query: 928 GVEDKLKSIIEVALSCVDANPERRPN 953
+L +I+ S ++ +P++RP+
Sbjct: 233 RYSSELNEVIK---SMLNVDPDKRPS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 5e-24
Identities = 79/274 (28%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G VY A LP+ + VA+K++ T E E++A++ H N+VK+Y
Sbjct: 9 IGVGATAVVYAAICLPNNEKVAIKRI-DLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTS 67
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATE-MDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+LV YL GSL I+ S +D + V+K V L Y+H + +
Sbjct: 68 FVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ---I 124
Query: 815 HRDVSSKNVLLDFEYEAHVSDFG-TAKLLKP-DSSNWSE--LAGTYGYVAPELAYTMK-V 869
HRD+ + N+LL + ++DFG +A L D + GT ++APE+ +
Sbjct: 125 HRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGY 184
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929
K D++SFG+ A+E+ G P S P + M + PP LE G
Sbjct: 185 DFKADIWSFGITAIELATGAAPY--------SKYPPMKV-----LMLTLQNDPPSLETGA 231
Query: 930 EDKL--KSIIEVALSCVDANPERRPNMQIVCKLL 961
+ K KS ++ C+ +P +RP + +LL
Sbjct: 232 DYKKYSKSFRKMISLCLQKDPSKRPTAE---ELL 262
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 5e-24
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 34/268 (12%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG+G +G VY G +K++ +++ L+E+K L + H NI+K+Y
Sbjct: 8 IGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYES 67
Query: 756 CSHARHSFLVYEYLERGSLARILSSETA-----TE---MDWSKRVNVIKGVAHALSYMHH 807
+V EY + G L++ + + E +DW + + AL Y+H
Sbjct: 68 FEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQ------LCLALKYLHS 121
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
I+HRD+ +N+ L + DFG +K+L + GT Y++PEL
Sbjct: 122 R---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNK 178
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
K D++S G + E+ +HP + G N+ E + + PP +
Sbjct: 179 PYNYKSDIWSLGCVLYELCTLKHPFE-----------GENLLELALKILKGQYPP--IPS 225
Query: 928 GVEDKLKSIIEVALSCVDANPERRPNMQ 955
+L++++ S + +PE RP++
Sbjct: 226 QYSSELRNLVS---SLLQKDPEERPSIA 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 21/266 (7%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G G V K P+G +AVK + QK+ L E+ L IV FYG
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTIRL-EINEAIQKQILRELDILHKCNSPYIVGFYGA 67
Query: 756 CSHARHSFLVYEYLERGSLARILSS-ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+ + EY++ GSL +IL + ++ V V L+Y+H + + I+
Sbjct: 68 FYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAV--AVLKGLTYLHEKHK--II 123
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCD 874
HRDV N+L++ + + DFG + L + GT Y+APE + K D
Sbjct: 124 HRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK--TFVGTSSYMAPERIQGNDYSVKSD 181
Query: 875 VYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDK-L 933
++S G+ +E+ G+ P + D E + ++ + PPP L G
Sbjct: 182 IWSLGLSLIELATGRFPYPPENDPPDGIF------ELLQYIVNE--PPPRLPSGKFSPDF 233
Query: 934 KSIIEVALSCVDANPERRPNMQIVCK 959
+ + + C+ +P RP+ + + +
Sbjct: 234 QDFVNL---CLIKDPRERPSYKELLE 256
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 43/280 (15%)
Query: 697 IGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQK-EFLSEIKALTGVRHRNIVK 751
IG G +G V++ L VA+K L G T Q+ +FLSE + H NI++
Sbjct: 13 IGAGEFGEVFRGILKMPGRKEVAVAIKTLKP--GYTEKQRQDFLSEASIMGQFSHHNIIR 70
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G + + + ++ EY+E G+L + L E + V +++G+A + Y+
Sbjct: 71 LEGVVTKFKPAMIITEYMENGALDKYLRDHDG-EFSSYQLVGMLRGIAAGMKYLSDM--- 126
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG---------YVAPE 862
VHRD++++N+L++ E VSDFG +++L+ D GTY + APE
Sbjct: 127 NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE------GTYTTSGGKIPIRWTAPE 180
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921
K T DV+SFG++ EV+ G+ P +S+ + +AI+ F RLP
Sbjct: 181 AIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--------HEVMKAINDGF--RLP 230
Query: 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
P D ++ ++ L C + RRP + LL
Sbjct: 231 APM------DCPSAVYQLMLQCWQQDRARRPRFVDIVNLL 264
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 24/258 (9%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V++ + VAVK L T + K+FL+E + + +RH +++ Y C
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDP---KDFLAEAQIMKKLRHPKLIQLYAVC 70
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ ++V E ++ GSL L + + +++ VA ++Y+ + +HR
Sbjct: 71 TLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHR 127
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKCDV 875
D++++NVL+ V+DFG A+++K D E A + APE A + + K DV
Sbjct: 128 DLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDV 187
Query: 876 YSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLK 934
+SFG+L E++ G+ P + A + + +D + R+P P G +L
Sbjct: 188 WSFGILLTEIVTYGRMPY--------PGMTNAEVLQQVDQGY--RMPCP---PGCPKELY 234
Query: 935 SIIEVALSCVDANPERRP 952
I+ L C +P+ RP
Sbjct: 235 DIM---LDCWKEDPDDRP 249
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 1e-22
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 35/264 (13%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH---RNIVKF 752
IGRG YG+VY+ +P+G VA+K ++ T + E+ L+ +R NI K+
Sbjct: 9 IGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKY 67
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
YG +++ EY E GS+ ++ + E S +I+ V AL Y+H
Sbjct: 68 YGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISV---IIREVLVALKYIHKV---G 121
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL-----AYTM 867
++HRD+ + N+L+ + DFG A LL +SS S GT ++APE+ Y
Sbjct: 122 VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDT 181
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
K D++S G+ E+ G P + A+ + ++ PP LE
Sbjct: 182 KA----DIWSLGITIYEMATGNPP-----------YSDVDAFRAMMLIPKSK--PPRLE- 223
Query: 928 GVEDKLKSIIEVALSCVDANPERR 951
K + E +C+D P+ R
Sbjct: 224 -DNGYSKLLREFVAACLDEEPKER 246
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 97.9 bits (244), Expect = 1e-22
Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 30/262 (11%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG+G +G VYK L VAVK S +K FL E + L H NIVK G C
Sbjct: 3 IGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRK-FLQEAEILKQYDHPNIVKLIGVC 61
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ ++V E + GSL L + + K + + A + Y+ + +HR
Sbjct: 62 VQKQPIYIVMELVPGGSLLTFLRKKKN-RLTVKKLLQMSLDAAAGMEYLESKN---CIHR 117
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT----YGYVAPELAYTMKVTEK 872
D++++N L+ +SDFG ++ + + ++ G + APE + T +
Sbjct: 118 DLAARNCLVGENNVLKISDFGMSR--EEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSE 175
Query: 873 CDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA--RLPPPWLEVGVE 930
DV+S+G+L E SL D+ PG + + + ++ R+P P +
Sbjct: 176 SDVWSYGILLWETF----------SLGDTPYPGMSNQQTRE-RIESGYRMPAP------Q 218
Query: 931 DKLKSIIEVALSCVDANPERRP 952
+ I + L C +PE RP
Sbjct: 219 LCPEEIYRLMLQCWAYDPENRP 240
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 2e-22
Identities = 60/197 (30%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFL-SEIKALTGVRHRNIVKFYG 754
IG+G G+VY A ++ +G VA+K+++ + +KE + +EI + +H NIV +
Sbjct: 27 IGQGASGTVYTAIDVATGQEVAIKQMNL---QQQPKKELIINEILVMRENKHPNIVNYLD 83
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
++V EYL GSL ++ T T MD + V + AL ++H ++
Sbjct: 84 SYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVI 137
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCD 874
HRD+ S N+LL + ++DFG + P+ S S + GT ++APE+ K D
Sbjct: 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 197
Query: 875 VYSFGVLALEVIKGQHP 891
++S G++A+E+++G+ P
Sbjct: 198 IWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 97.5 bits (243), Expect = 3e-22
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 51/291 (17%)
Query: 697 IGRGGYGSVYKAEL----PSGDT--VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G V+ E P D VAVK L K+F E + LT +H NIV
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDAR-KDFEREAELLTNFQHENIV 71
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSS------------ETATEMDWSKRVNVIKGV 798
KFYG C+ +V+EY+E G L + L S E+ S+ + + +
Sbjct: 72 KFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQI 131
Query: 799 AHALSYM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT- 855
A + Y+ H VHRD++++N L+ ++ + DFG ++ + ++++ + G
Sbjct: 132 ASGMVYLASQH-----FVHRDLATRNCLVGYDLVVKIGDFGMSRDVY--TTDYYRVGGHT 184
Query: 856 ---YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEA 911
++ PE K T + DV+SFGV+ E+ G+ P LS+ E
Sbjct: 185 MLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN-----------EEV 233
Query: 912 IDHMFDAR-LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
I+ + R L P + ++ L C +P++R N++ + + L
Sbjct: 234 IECITQGRLLQRP------RTCPSEVYDIMLGCWKRDPQQRINIKDIHERL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 97.5 bits (243), Expect = 3e-22
Identities = 78/295 (26%), Positives = 116/295 (39%), Gaps = 62/295 (21%)
Query: 697 IGRGGYGSVYKAEL-PSGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G V P GD VAVK L+ E H+ +F EI+ L + H NIVK
Sbjct: 12 LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQ-HRSDFEREIEILRTLDHENIVK 70
Query: 752 FYGFC--SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ G C R L+ EYL GSL R +++ + + + + Y+ +
Sbjct: 71 YKGVCEKPGGRSLRLIMEYLPSGSL-RDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ- 128
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV---------- 859
+HRD++++N+L++ E +SDFG AK+L D Y YV
Sbjct: 129 --RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKD--------YYYVKEPGESPIFW 178
Query: 860 -APELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918
APE T K + DV+SFGV E L + S P A I
Sbjct: 179 YAPECLRTSKFSSASDVWSFGVTLYE---------LFTYGDPSQSPPAEFLRMIGIAQGQ 229
Query: 919 --------------RLPPPWLEVGVEDKLKS-IIEVALSCVDANPERRPNMQIVC 958
RLP P + ++ C +A P+ RP+ +
Sbjct: 230 MIVTRLLELLKEGERLPRP-------PSCPDEVYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 96.3 bits (239), Expect = 6e-22
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 27/262 (10%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G+G +G V+ VA+K L T + FL E + + +RH +V+ Y
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 70
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
S ++V EY+ +GSL L E + + V++ +A ++Y+ R VHR
Sbjct: 71 SE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 126
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKCDV 875
D+ + N+L+ V+DFG A+L++ + + A + APE A + T K DV
Sbjct: 127 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186
Query: 876 YSFGVLALEV-IKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKL 933
+SFG+L E+ KG+ P PG E +D + R+P P +
Sbjct: 187 WSFGILLTELTTKGRVP-----------YPGMVNREVLDQVERGYRMPCP------PECP 229
Query: 934 KSIIEVALSCVDANPERRPNMQ 955
+S+ ++ C PE RP +
Sbjct: 230 ESLHDLMCQCWRKEPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 96.3 bits (239), Expect = 1e-21
Identities = 61/197 (30%), Positives = 108/197 (54%), Gaps = 11/197 (5%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFL-SEIKALTGVRHRNIVKFYG 754
IG+G G+V+ A ++ +G VA+K+++ + +KE + +EI + +++ NIV F
Sbjct: 27 IGQGASGTVFTAIDVATGQEVAIKQINL---QKQPKKELIINEILVMKELKNPNIVNFLD 83
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
F+V EYL GSL ++ T T MD ++ V + AL ++H ++
Sbjct: 84 SFLVGDELFVVMEYLAGGSLTDVV---TETCMDEAQIAAVCRECLQALEFLHAN---QVI 137
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCD 874
HRD+ S NVLL + ++DFG + P+ S S + GT ++APE+ K D
Sbjct: 138 HRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 197
Query: 875 VYSFGVLALEVIKGQHP 891
++S G++A+E+++G+ P
Sbjct: 198 IWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 94.9 bits (236), Expect = 2e-21
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 28/269 (10%)
Query: 690 NFDESFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN 748
+F+ IG+G +G V+K + A+K++ ++E + E + L +
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMD----WSKRVNVIKGVAHALSY 804
I+++Y +V EY E G L ++L + + W + ++ G L++
Sbjct: 61 IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG----LAH 116
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
+H + I+HRD+ S N+ LD + D G AKLL +++ + + GT Y++PEL
Sbjct: 117 LHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELC 173
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924
EK DV++ GV+ E G+HP D N I + PP
Sbjct: 174 EDKPYNEKSDVWALGVVLYECCTGKHPFD-----------ANNQGALILKIIRGVFPP-- 220
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPN 953
+ +L +I+ C+ + +RP+
Sbjct: 221 VSQMYSQQLAQLID---QCLTKDYRQRPD 246
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 2e-21
Identities = 79/267 (29%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 697 IGRGGYGSVYKA--ELPSGD--TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G +GSV K + SG VAVK L +KEFL E + + H IV+
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEH-IAAGKKEFLREASVMAQLDHPCIVRL 61
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY-MHH--EC 809
G C LV E G L + L V+ +K +AH ++ M +
Sbjct: 62 IGVCK-GEPLMLVMELAPLGPLLKYLKKRREIP------VSDLKELAHQVAMGMAYLESK 114
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW-SELAGTY--GYVAPELAYT 866
VHRD++++NVLL ++A +SDFG ++ L S + + AG + + APE
Sbjct: 115 H--FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY 172
Query: 867 MKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925
K + K DV+S+GV E G P + GA + ++ RLP P
Sbjct: 173 GKFSSKSDVWSYGVTLWEAFSYGAKPY--------GEMKGAEVIAMLES--GERLPRP-- 220
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRP 952
E+ + I + LSC PE RP
Sbjct: 221 ----EECPQEIYSIMLSCWKYRPEDRP 243
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 2e-21
Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 45/277 (16%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V+ + VA+K + + +F+ E K + + H N+V+ YG C
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIRE---GAMSEDDFIEEAKVMMKLSHPNLVQLYGVC 68
Query: 757 SHARHSFLVYEYLERGSLA-------RILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ R F+V EY+ G L L +E +M V A+ Y+
Sbjct: 69 TKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDM--------CSDVCEAMEYLESNG 120
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT---YGYVAPELAYT 866
+HRD++++N L+ + VSDFG A+ + D S+ GT + PE+
Sbjct: 121 ---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ--GTKFPVKWAPPEVFDY 175
Query: 867 MKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924
+ + K DV+SFGVL EV +G+ P + S+ E ++ + RL P
Sbjct: 176 SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-----------EVVESVSAGYRLYRPK 224
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
L + + SC PE RP + + L
Sbjct: 225 LAP------TEVYTIMYSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 94.3 bits (235), Expect = 2e-21
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 691 FDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNI 749
FD +G G YGSVYKA +G VA+K + KE I L I
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKE----ISILKQCDSPYI 60
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARI--LSSETATEMDWSKRVNVIKGVAHALSYMHH 807
VK+YG ++V EY GS++ I ++++T TE + + ++ L Y+H
Sbjct: 61 VKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAA---ILYQTLKGLEYLH- 116
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
+HRD+ + N+LL+ E +A ++DFG + L + + + GT ++APE+ +
Sbjct: 117 --SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEI 174
Query: 868 KVTEKCDVYSFGVLALEVIKGQHP 891
K D++S G+ A+E+ +G+ P
Sbjct: 175 GYNNKADIWSLGITAIEMAEGKPP 198
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 94.2 bits (234), Expect = 3e-21
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 34/276 (12%)
Query: 697 IGRGGYGSVYKAEL-PSG---DTVAVKKLHSFTGETTHQ-KEFLSEIKALTGVRHRNIVK 751
IG G +G V + L G VA+K L S G T Q ++FLSE + H NI+
Sbjct: 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKS--GYTEKQRRDFLSEASIMGQFDHPNIIH 69
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G + +R ++ E++E G+L L + + V +++G+A + Y+
Sbjct: 70 LEGVVTKSRPVMIITEFMENGALDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLSEM--- 125
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG-----YVAPELAYT 866
VHRD++++N+L++ VSDFG ++ L+ D+S+ + + G + APE
Sbjct: 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY 185
Query: 867 MKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925
K T DV+S+G++ EV+ G+ P +S+ ++ AI+ D RLPPP
Sbjct: 186 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------QDVINAIEQ--DYRLPPP-- 233
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
D ++ ++ L C + RP QIV L
Sbjct: 234 ----MDCPTALHQLMLDCWQKDRNARPKFGQIVSTL 265
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 3e-21
Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 19/209 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTG-------VRHRN 748
IG G +GSVY SG+ +AVK++ + + + S + AL ++H N
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
IV++ G A H + EY+ GS+A +L++ A E + N ++ + L+Y+H+
Sbjct: 68 IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVR--NFVRQILKGLNYLHNR 125
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS------ELAGTYGYVAPE 862
I+HRD+ N+L+D + +SDFG +K L+ +S + L G+ ++APE
Sbjct: 126 ---GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPE 182
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+ T K D++S G L +E++ G+HP
Sbjct: 183 VVKQTSYTRKADIWSLGCLVVEMLTGKHP 211
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 94.4 bits (234), Expect = 4e-21
Identities = 57/196 (29%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG+G G+VY A ++ +G VA+++++ + ++ ++EI + ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
++V EYL GSL ++ T T MD + V + AL ++H ++H
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDV 875
RD+ S N+LL + ++DFG + P+ S S + GT ++APE+ K D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 876 YSFGVLALEVIKGQHP 891
+S G++A+E+I+G+ P
Sbjct: 200 WSLGIMAIEMIEGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 93.2 bits (232), Expect = 1e-20
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 697 IGRGGYGSVYKAE-LPSGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G+VYK +P G+ VA+K L T KE L E + V H ++V+
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKA-NKEILDEAYVMASVDHPHVVR 73
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY--MHHEC 809
G C ++ L+ + + G L + + +N +A +SY
Sbjct: 74 LLGICLSSQVQ-LITQLMPLGCLLDYVR-NHKDNIGSQYLLNWCVQIAKGMSYLEEKR-- 129
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY--GYVAPELAYTM 867
+VHRD++++NVL+ ++DFG AKLL D + G ++A E
Sbjct: 130 ---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHR 186
Query: 868 KVTEKCDVYSFGVLALEVIK-GQHPKD 893
T K DV+S+GV E++ G P +
Sbjct: 187 IYTHKSDVWSYGVTVWELMTFGAKPYE 213
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 1e-20
Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 14/194 (7%)
Query: 697 IGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G YG VY+ TVAVK L +T +EFL E + ++H N+V+ G
Sbjct: 14 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 70
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
C+ +++ E++ G+L L E++ + + ++ A+ Y+ + +H
Sbjct: 71 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 127
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT---YGYVAPE-LAYTMKVTE 871
RD++++N L+ + V+DFG ++L+ D+ ++ AG + APE LAY K +
Sbjct: 128 RDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESLAYN-KFSI 184
Query: 872 KCDVYSFGVLALEV 885
K DV++FGVL E+
Sbjct: 185 KSDVWAFGVLLWEI 198
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 92.7 bits (231), Expect = 1e-20
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 57/275 (20%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKL---HSFTGETTHQKE--FLSEIKALTGVRHRNI 749
CIG+G +G VYKA + + VA+K + + Q+E FLS+ ++ I
Sbjct: 8 CIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSP------YI 61
Query: 750 VKFYGFCSHARHSFL-------VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHAL 802
K+YG SFL + EY GS +L E + +++ V L
Sbjct: 62 TKYYG-------SFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAF---ILREVLLGL 111
Query: 803 SYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE 862
Y+H E + +HRD+ + N+LL E + ++DFG + L S + GT ++APE
Sbjct: 112 EYLHEEGK---IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPE 168
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL-- 920
+ EK D++S G+ A+E+ KG+ P LSD + M L
Sbjct: 169 VIKQSGYDEKADIWSLGITAIELAKGEPP------LSD-----------LHPMRVLFLIP 211
Query: 921 --PPPWLE-VGVEDKLKSIIEVALSCVDANPERRP 952
PP LE K + C++ +P+ RP
Sbjct: 212 KNNPPSLEGNKFSKPFKDFVS---LCLNKDPKERP 243
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 92.8 bits (231), Expect = 1e-20
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 7/195 (3%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG VYKA + +G+ VA+KK+ K L EIK L + H NI+K
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDV 66
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
H +LV+E+++ L +++ + S + + + L++ H I+H
Sbjct: 67 FRHKGDLYLVFEFMDT-DLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCH---SHGILH 121
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV-TEKCD 874
RD+ +N+L++ E ++DFG A+ ++ T Y APEL K + D
Sbjct: 122 RDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVD 181
Query: 875 VYSFGVLALEVIKGQ 889
++S G + E++ +
Sbjct: 182 IWSVGCIFAELLSRR 196
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 92.0 bits (228), Expect = 1e-20
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 27/262 (10%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V+ VAVK L T + FL E + + +RH +V+ Y
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTLKP---GTMSPESFLEEAQIMKKLRHDKLVQLYAVV 70
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
S ++V EY+ +GSL L + V++ VA ++Y+ R +HR
Sbjct: 71 SE-EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHR 126
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKCDV 875
D+ S N+L+ ++DFG A+L++ + + A + APE A + T K DV
Sbjct: 127 DLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186
Query: 876 YSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKL 933
+SFG+L E++ KG+ P PG N E ++ + R+P P +D
Sbjct: 187 WSFGILLTELVTKGRVP-----------YPGMNNREVLEQVERGYRMPCP------QDCP 229
Query: 934 KSIIEVALSCVDANPERRPNMQ 955
S+ E+ L C +PE RP +
Sbjct: 230 ISLHELMLQCWKKDPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 92.9 bits (230), Expect = 2e-20
Identities = 57/196 (29%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG+G G+VY A ++ +G VA+K+++ + ++ ++EI + ++ NIV +
Sbjct: 27 IGQGASGTVYTAIDIATGQEVAIKQMN--LQQQPKKELIINEILVMRENKNPNIVNYLDS 84
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
++V EYL GSL ++ T T MD + V + AL ++H ++H
Sbjct: 85 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALDFLHSN---QVIH 138
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDV 875
RD+ S N+LL + ++DFG + P+ S S + GT ++APE+ K D+
Sbjct: 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 198
Query: 876 YSFGVLALEVIKGQHP 891
+S G++A+E+++G+ P
Sbjct: 199 WSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 92.2 bits (229), Expect = 2e-20
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 51/280 (18%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFL--------SEIKALTGVRHR 747
IG+G YG VY A + +G+ +AVK++ SEI+ L + H
Sbjct: 9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYM 805
NIV++ GF + + + EY+ GS+ L + E + V++G L+Y+
Sbjct: 69 NIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEG----LAYL 124
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA--GTYGYVAPEL 863
H + I+HRD+ + N+L+D + +SDFG +K N ++ G+ ++APE+
Sbjct: 125 HSK---GILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEV 181
Query: 864 --AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---- 917
+Y+ + K D++S G + LE+ G+ P SD EAI MF
Sbjct: 182 IHSYSQGYSAKVDIWSLGCVVLEMFAGRRP------WSD--------EEAIAAMFKLGNK 227
Query: 918 ARLPP-PWLEVGVEDKLKSIIEVAL----SCVDANPERRP 952
PP P D ++ VAL +C NP+ RP
Sbjct: 228 RSAPPIP------PDVSMNLSPVALDFLNACFTINPDNRP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 2e-20
Identities = 76/266 (28%), Positives = 133/266 (50%), Gaps = 39/266 (14%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQK--EFLSEIKALTGVRHRNIVKFY 753
IG G +G+VY A ++ + + VA+KK+ S++G+ +++K + + E++ L +RH N +++
Sbjct: 23 IGHGSFGAVYFARDVRTNEVVAIKKM-SYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYK 81
Query: 754 GFCSHARHS-FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
G C H+ +LV EY GS + IL + + + G L+Y+H R
Sbjct: 82 G-CYLREHTAWLVMEYC-LGSASDILEVHKKP-LQEVEIAAICHGALQGLAYLHSHER-- 136
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM---KV 869
+HRD+ + N+LL ++DFG+A L+ P +S GT ++APE+ M +
Sbjct: 137 -IHRDIKAGNILLTEPGTVKLADFGSASLVSPANS----FVGTPYWMAPEVILAMDEGQY 191
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN--EAIDHMFDARLPPPWLE- 926
K DV+S G+ +E L++ P NMN A+ H+ A+ P L
Sbjct: 192 DGKVDVWSLGITCIE-------------LAERKPPLFNMNAMSALYHI--AQNDSPTLSS 236
Query: 927 VGVEDKLKSIIEVALSCVDANPERRP 952
D ++ ++ SC+ P+ RP
Sbjct: 237 NDWSDYFRNFVD---SCLQKIPQDRP 259
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 7e-20
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G +G V+KA + +G+TVA+KK+ E + L EIKAL +H +VK
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDV 67
Query: 756 CSHARHSFLVYEYLERGSLARILSSETA--TEMDWSKRVNVIKGVAH----ALSYMHHEC 809
H LV EY+ L+ +L E E +K ++YMH
Sbjct: 68 FPHGSGFVLVMEYMPS-DLSEVLRDEERPLPEAQ-------VKSYMRMLLKGVAYMHAN- 118
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN-WSELAGTYGYVAPELAY-TM 867
I+HRD+ N+L+ + ++DFG A+L + +S T Y APEL Y
Sbjct: 119 --GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGAR 176
Query: 868 KVTEKCDVYSFGVLALEVIKGQ 889
K D+++ G + E++ G
Sbjct: 177 KYDPGVDLWAVGCIFAELLNGS 198
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 8e-20
Identities = 71/276 (25%), Positives = 112/276 (40%), Gaps = 24/276 (8%)
Query: 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN 748
E +G G GSV K L + + K + QK+ L E++ +
Sbjct: 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY 60
Query: 749 IVKFYGFCSHARHSFL--VYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSY 804
IVK+YG S + EY E GSL I ++V + + V LSY
Sbjct: 61 IVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSY 120
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-- 862
+H I+HRD+ N+LL + + + DFG + L +S GT Y+APE
Sbjct: 121 LHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV--NSLAGTFTGTSFYMAPERI 175
Query: 863 --LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920
Y++ DV+S G+ LEV + + P + L + I +M + L
Sbjct: 176 QGKPYSI----TSDVWSLGLTLLEVAQNRFP---FPPEGEPPLGPIELLSYIVNMPNPEL 228
Query: 921 P-PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
P + ++ K I+ C++ +P RRP
Sbjct: 229 KDEPGNGIKWSEEFKDFIKQ---CLEKDPTRRPTPW 261
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 8e-20
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 50/274 (18%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG VYKA ++ +G+ VA+K + G+ + EI L RH NIV ++G
Sbjct: 11 IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDF--EIIQQEISMLKECRHPNIVAYFG- 67
Query: 756 CSHARHSFL--VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
S+ R L V EY GSL I T + + V + L+Y+H +
Sbjct: 68 -SYLRRDKLWIVMEYCGGGSLQDIYQ-VTRGPLSELQIAYVCRETLKGLAYLHETGK--- 122
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA---YTMKVT 870
+HRD+ N+LL + + ++DFG + L + GT ++APE+A
Sbjct: 123 IHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYD 182
Query: 871 EKCDVYSFGVLALEVIKGQ------HPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924
KCD+++ G+ A+E+ + Q HP L +S S+ PPP
Sbjct: 183 GKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSN-----------------FPPPK 225
Query: 925 LEVGVEDKLK------SIIEVALSCVDANPERRP 952
L +DK K I+ L+ +P++RP
Sbjct: 226 L----KDKEKWSPVFHDFIKKCLT---KDPKKRP 252
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 89.6 bits (222), Expect = 1e-19
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 31/266 (11%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V + VA+K + + + EF+ E K + + H +V+ YG C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMKLSHEKLVQLYGVC 68
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ R ++V EY+ G L L E S+ + + K V ++Y+ + +HR
Sbjct: 69 TKQRPIYIVTEYMSNGCLLNYL-REHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHR 124
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPD---SSNWSELAGTYGYVAPELAYTMKVTEKC 873
D++++N L+D + VSDFG ++ + D SS S+ + PE+ K + K
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS--PPEVLLYSKFSSKS 182
Query: 874 DVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVED 931
DV++FGVL EV G+ P + N +E ++ + RL P L +
Sbjct: 183 DVWAFGVLMWEVYSLGKMPYERF-----------NNSETVEKVSQGLRLYRPHL---ASE 228
Query: 932 KLKSIIEVALSCVDANPERRPNMQIV 957
K+ +I+ SC E RP Q +
Sbjct: 229 KVYAIM---YSCWHEKAEERPTFQQL 251
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 89.1 bits (221), Expect = 1e-19
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 29/260 (11%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V+ + + VA+K ++ +++F+ E K + + H +V+ YG C
Sbjct: 12 LGSGQFGVVHLGKWRAQIKVAIKAINE---GAMSEEDFIEEAKVMMKLSHPKLVQLYGVC 68
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYMHHECRPPIV 814
+ + ++V E++E G L L SK + ++ + V + Y+ R +
Sbjct: 69 TQQKPLYIVTEFMENGCLLNYLRQRQGK---LSKDMLLSMCQDVCEGMEYLE---RNSFI 122
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKC 873
HRD++++N L+ VSDFG + + D S A + PE+ K + K
Sbjct: 123 HRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKS 182
Query: 874 DVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDK 932
DV+SFGVL EV +G+ P + S+ M ++ +L
Sbjct: 183 DVWSFGVLMWEVFTEGKMPFE-----KKSNYEVVEMISRGFRLYRPKLAS---------- 227
Query: 933 LKSIIEVALSCVDANPERRP 952
++ EV SC PE RP
Sbjct: 228 -MTVYEVMYSCWHEKPEGRP 246
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 89.2 bits (221), Expect = 1e-19
Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 33/262 (12%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG G +G+V + E +G VAVK + + T Q FL E +T + H+N+V+ G
Sbjct: 14 IGEGEFGAVLQGEY-TGQKVAVKNIKC---DVTAQA-FLEETAVMTKLHHKNLVRLLGVI 68
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
H ++V E + +G+L L + + + + VA + Y+ + +VHR
Sbjct: 69 LH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHR 124
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVY 876
D++++N+L+ + A VSDFG A+ + + S+L + APE K + K DV+
Sbjct: 125 DLAARNILVSEDGVAKVSDFGLAR-VGSMGVDNSKLP--VKWTAPEALKHKKFSSKSDVW 181
Query: 877 SFGVLALEVI---KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKL 933
S+GVL EV + +PK L + E ++ + R+ PP E
Sbjct: 182 SYGVLLWEVFSYGRAPYPKMSLKEVK----------ECVEKGY--RMEPP------EGCP 223
Query: 934 KSIIEVALSCVDANPERRPNMQ 955
+ + SC + P++RP+
Sbjct: 224 ADVYVLMTSCWETEPKKRPSFH 245
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 88.7 bits (221), Expect = 1e-19
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEF-LSEIKALTGVRHRNIVK-FY 753
+G+G +G V + +G A+K L + E L+E L+ + H IVK Y
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHY 60
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
F + +LV EY G L LS E + ++ + AL Y+H I
Sbjct: 61 AFQTE-EKLYLVLEYAPGGELFSHLSKEGRFSEERARFY--AAEIVLALEYLH---SLGI 114
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL----AYTMKV 869
++RD+ +N+LLD + ++DFG AK L + S + GT Y+APE+ Y V
Sbjct: 115 IYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAV 174
Query: 870 TEKCDVYSFGVLALEVIKGQHP 891
D +S GVL E++ G+ P
Sbjct: 175 ----DWWSLGVLLYEMLTGKPP 192
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 89.2 bits (222), Expect = 2e-19
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 32/270 (11%)
Query: 697 IGRGGYGSVYKAELPS-GDTVAVKKL--HSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
I +G YG V+ A+ S GD A+K + + + L+E L+ + +VK Y
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKN-QVDQVLTERDILSQAQSPYVVKLY 59
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
++ +LV EYL G LA +L + + + D ++ I + AL Y+H I
Sbjct: 60 YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVAR--IYIAEIVLALEYLH---SNGI 114
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKL--------LKPDSSNWSELAGTYGYVAPELAY 865
+HRD+ N+L+D ++DFG +K+ L D + GT Y+APE+
Sbjct: 115 IHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVIL 174
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925
++ D +S G + E + G P G E ++ + ++ P
Sbjct: 175 GQGHSKTVDWWSLGCILYEFLVGIPP-----------FHGETPEEIFQNILNGKIEWP-E 222
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+V V D+ +I L +PE+R +
Sbjct: 223 DVEVSDEAIDLISKLL---VPDPEKRLGAK 249
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 3e-19
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 14/265 (5%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G GSV K + +P+G +A K +H +++ +K+ L E++ + R IV FYG
Sbjct: 13 LGAGNGGSVSKVKHIPTGTVMAKKVVH-IGAKSSVRKQILRELQIMHECRSPYIVSFYGA 71
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+ + + E+++ GSL RI ++ ++ V V L+Y+++ R I+H
Sbjct: 72 FLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAV--AVVEGLTYLYNVHR--IMH 127
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDV 875
RD+ N+L++ + + DFG + L +S GT Y++PE K T K DV
Sbjct: 128 RDIKPSNILVNSRGQIKLCDFGVSGELI--NSIADTFVGTSTYMSPERIQGGKYTVKSDV 185
Query: 876 YSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKS 935
+S G+ +E+ G+ P + D + + + + PPP L
Sbjct: 186 WSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE--PPPRLP---SSDFPE 240
Query: 936 IIEVALS-CVDANPERRPNMQIVCK 959
+ + C+ +P RP Q +C
Sbjct: 241 DLRDFVDACLLKDPTERPTPQQLCA 265
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 88.0 bits (218), Expect = 4e-19
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 37/271 (13%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQ----KEFLSEIKALTGVRHRNIVK 751
+G G + S Y+A ++ +G +AVK++ ++ Q + EI+ + + H +I++
Sbjct: 8 LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIR 67
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G H L E++ GS++ +LS A + +N + + LSY+H
Sbjct: 68 MLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVI--INYTEQLLRGLSYLHEN--- 122
Query: 812 PIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSSNWSE----LAGTYGYVAPELAYT 866
I+HRDV N+L+D ++DFG A L + E L GT ++APE+
Sbjct: 123 QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG 182
Query: 867 MKVTEKCDVYSFGVLALEVIKGQHP--KDLLSSLSDSSLPGANMNEAIDHMFDARLPPP- 923
+ CDV+S G + +E+ + P + S N I + A P
Sbjct: 183 EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS----------NHLALIFKIASATTAPSI 232
Query: 924 --WLEVGVEDKLKSIIEVALSCVDANPERRP 952
L G+ D V L C++ PE RP
Sbjct: 233 PEHLSPGLRD-------VTLRCLELQPEDRP 256
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 5e-19
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 37/275 (13%)
Query: 697 IGRGGYGSVYKAELPSGDT-VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IGRG +G V+ L + +T VAVK T + +FL E + L H NIV+ G
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRE-TLPPDLKAKFLQEARILKQYSHPNIVRLIGV 61
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
C+ + ++V E ++ G L +E + + + +++ A + Y+ + +H
Sbjct: 62 CTQKQPIYIVMELVQGGDFLTFLRTEGP-RLKVKELIQMVENAAAGMEYLESKH---CIH 117
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT----YGYVAPELAYTMKVTE 871
RD++++N L+ + +SDFG ++ + + ++ G + APE + +
Sbjct: 118 RDLAARNCLVTEKNVLKISDFGMSR--EEEDGVYASTGGMKQIPVKWTAPEALNYGRYSS 175
Query: 872 KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN-----EAIDHMFDARLPPPWLE 926
+ DV+SFG+L L + S ++P AN++ EAI+ RLP P
Sbjct: 176 ESDVWSFGIL------------LWEAFSLGAVPYANLSNQQTREAIEQ--GVRLPCP--- 218
Query: 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
E ++ + C + +P +RP+ V + L
Sbjct: 219 ---ELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 5e-19
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G YG V K +G+ VA+KK + +K L E+K L +RH NIV
Sbjct: 9 VGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEA 68
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+LV+EY+ER L + +S D + I + A++Y H I+H
Sbjct: 69 FRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRS--YIWQLLQAIAYCH---SHNIIH 123
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLK-PDSSNWSELAGTYGYVAPEL-----AYTMKV 869
RD+ +N+L+ + DFG A+ L+ +S ++ T Y APEL Y V
Sbjct: 124 RDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPV 183
Query: 870 TEKCDVYSFGVLALEVIKGQ 889
DV++ G + E++ G+
Sbjct: 184 ----DVWAIGCIMAELLDGE 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 6e-19
Identities = 79/276 (28%), Positives = 120/276 (43%), Gaps = 36/276 (13%)
Query: 697 IGRGGYGSVYKAEL-PSGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G+G +GSV P D VAVKKL T E H ++F EI+ L ++H NIVK
Sbjct: 12 LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAE--HLRDFEREIEILKSLQHDNIVK 69
Query: 752 FYGFC-SHARHSF-LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ G C S R + LV EYL GSL L +D K + + + Y+ +
Sbjct: 70 YKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRE-RLDHRKLLLYASQICKGMEYLGSK- 127
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL----AGTYGYVAPELAY 865
VHRD++++N+L++ E + DFG K+L D + + + Y APE
Sbjct: 128 --RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWY-APESLT 184
Query: 866 TMKVTEKCDVYSFGVLALEVI----KGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---- 917
K + DV+SFGV+ E+ K P + + G + H+ +
Sbjct: 185 ESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQ---MIVYHLIELLKN 241
Query: 918 -ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
RLP P I + C + +P +RP
Sbjct: 242 NGRLPAP------PGCPAEIYAIMKECWNNDPSQRP 271
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 87.8 bits (217), Expect = 9e-19
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 24/232 (10%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFL-SEIKALTGVRHRNIVKFYG 754
IG G G V A E SG VAVK + ++E L +E+ + +H+N+V+ Y
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMDL---RKQQRRELLFNEVVIMRDYQHQNVVEMYK 85
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+++ E+L+ G+L I+S E + V + V AL Y+H + ++
Sbjct: 86 SYLVGEELWVLMEFLQGGALTDIVSQTRLNE---EQIATVCESVLQALCYLHSQ---GVI 139
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCD 874
HRD+ S ++LL + +SDFG + D L GT ++APE+ + D
Sbjct: 140 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVD 199
Query: 875 VYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926
++S G++ +E++ G+ P SDS + +A+ + D+ PPP L+
Sbjct: 200 IWSLGIMVIEMVDGEPP-----YFSDSPV------QAMKRLRDS--PPPKLK 238
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 87.4 bits (217), Expect = 1e-18
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 34/243 (13%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-----FLSEIK 739
RS+ F++ IG G YG VY+A + SG+ VA+KK+ ++++ L EI
Sbjct: 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKV-----RMDNERDGIPISSLREIT 58
Query: 740 ALTGVRHRNIVKFYGFC--SHARHSFLVYEYLERGSLARILSSETA--TEMDWSKRVNVI 795
L +RH NIV+ H FLV EY E+ LA +L + +E S+ ++
Sbjct: 59 LLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSE---SQVKCLM 114
Query: 796 KGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT 855
+ L Y+H I+HRD+ N+LL + ++DFG A+ + + T
Sbjct: 115 LQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVT 171
Query: 856 YGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914
Y APEL T D+++ G + E++ K L LPG + E +D
Sbjct: 172 LWYRAPELLLGCTTYTTAIDMWAVGCILAELLAH---KPL--------LPGKSEIEQLDL 220
Query: 915 MFD 917
+
Sbjct: 221 IIQ 223
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 1e-18
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 690 NFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFL-SEIKALTGVRHR 747
D IG G G V A + +G VAVKK+ ++E L +E+ + +H
Sbjct: 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDL---RKQQRRELLFNEVVIMRDYQHP 76
Query: 748 NIVKFYGFCSHARHSFLV-------YEYLERGSLARILSSETATEMDWSKRVNVIKGVAH 800
NIV+ Y S+LV E+LE G+L I+ T T M+ + V V
Sbjct: 77 NIVEMYS-------SYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLAVLK 126
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVA 860
ALS++H + ++HRD+ S ++LL + +SDFG + + L GT ++A
Sbjct: 127 ALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMA 183
Query: 861 PELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
PE+ + + D++S G++ +E++ G+ P
Sbjct: 184 PEVISRLPYGTEVDIWSLGIMVIEMVDGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 85.9 bits (212), Expect = 3e-18
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 22/263 (8%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG+G +G V+K V K+ ++ EI L+ + K+YG
Sbjct: 12 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 71
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+++ EYL GS +L +D ++ +++ + L Y+H E + +HR
Sbjct: 72 LKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKK---IHR 125
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVY 876
D+ + NVLL E ++DFG A L + GT ++APE+ K D++
Sbjct: 126 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW 185
Query: 877 SFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSI 936
S G+ A+E+ KG+ P L + L N PP LE LK
Sbjct: 186 SLGITAIELAKGEPPHSELHPMKVLFLIPKN-------------NPPTLEGNYSKPLKEF 232
Query: 937 IEVALSCVDANPERRPNMQIVCK 959
+E +C++ P RP + + K
Sbjct: 233 VE---ACLNKEPSFRPTAKELLK 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 85.4 bits (211), Expect = 3e-18
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 12/190 (6%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG+G +G V + G+ VAVK + + + T Q FL+E +T +RH N+V+ G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKN---DATAQA-FLAEASVMTQLRHSNLVQLLGVI 68
Query: 757 SHARHS-FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+ ++V EY+ +GSL L S + + + V A+ Y+ VH
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVH 125
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDV 875
RD++++NVL+ + A VSDFG L K SS + APE K + K DV
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 876 YSFGVLALEV 885
+SFG+L E+
Sbjct: 183 WSFGILLWEI 192
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 86.3 bits (213), Expect = 3e-18
Identities = 74/274 (27%), Positives = 138/274 (50%), Gaps = 41/274 (14%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQK--EFLSEIKALTGVRHRNIVKFY 753
IG G +G+VY A ++ + + VA+KK+ S++G+ +++K + + E++ L +RH N +++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKM-SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 754 GFCSHARHSFLVYEYLERGSLARILS--SETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G ++LV EY GS + +L + E++ + V G L+Y+H
Sbjct: 82 GCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSH--- 134
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
++HRDV + N+LL + DFG+A ++ P + GT ++APE+ M +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQ 190
Query: 872 ---KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN--EAIDHMFDARLPPPWLE 926
K DV+S G+ +E L++ P NMN A+ H+ A+ P L+
Sbjct: 191 YDGKVDVWSLGITCIE-------------LAERKPPLFNMNAMSALYHI--AQNESPALQ 235
Query: 927 VGV-EDKLKSIIEVALSCVDANPERRPNMQIVCK 959
G + ++ ++ SC+ P+ RP +++ K
Sbjct: 236 SGHWSEYFRNFVD---SCLQKIPQDRPTSEVLLK 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 4e-18
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 32/266 (12%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G YGSVYK + L A+K++ + +++ ++EI+ L V H NI+ +
Sbjct: 8 LGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEA 67
Query: 756 CSHARHSFLVYEYLERGSLARILSSETA------TEMDWSKRVNVIKGVAHALSYMHHEC 809
+V EY G L++ +S + W + +++G+ AL HE
Sbjct: 68 FLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGL-QAL----HEQ 122
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
+ I+HRD+ S N+LL + D G +K+LK + + GT Y+APE+
Sbjct: 123 K--ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK--TQIGTPHYMAPEVWKGRPY 178
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929
+ K D++S G L E+ P +M + + + PP +
Sbjct: 179 SYKSDIWSLGCLLYEMATFAPP-----------FEARSMQDLRYKVQRGKYPP--IPPIY 225
Query: 930 EDKLKSIIEVALSCVDANPERRPNMQ 955
L++ I S + P+ RPN
Sbjct: 226 SQDLQNFIR---SMLQVKPKLRPNCD 248
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 4e-18
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 35/281 (12%)
Query: 697 IGRGGYGSVYKAE---LPSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNI 749
+G G +G V +A L D VAVK L T ++ ++ +SE+K ++ + H NI
Sbjct: 43 LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKP-TAHSSEREALMSELKIMSHLGNHENI 101
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE- 808
V G C+ ++ EY G L L + + + ++ VA ++++ +
Sbjct: 102 VNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN 161
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY---GYVAPELAY 865
C +HRD++++NVLL + DFG A+ + D SN+ ++APE +
Sbjct: 162 C----IHRDLAARNVLLTHGKIVKICDFGLARDIMND-SNYVVKGNARLPVKWMAPESIF 216
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA--RLPPP 923
T + DV+S+G+L E+ SL + PG ++ + R+ P
Sbjct: 217 NCVYTFESDVWSYGILLWEIF----------SLGSNPYPGMPVDSKFYKLIKEGYRMAQP 266
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964
E I ++ +C DA+P +RP + + +L+ Q
Sbjct: 267 ------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 4e-18
Identities = 69/265 (26%), Positives = 110/265 (41%), Gaps = 30/265 (11%)
Query: 697 IGRGGYGSVYKAEL--PSGDT--VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G +G V + E G VAVK L S +FL E + + H N+++
Sbjct: 3 LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDI-MDDFLKEAAIMHSLDHENLIRL 61
Query: 753 YGFCSHARHSF-LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
YG H +V E GSL L + S + +A+ + Y+ +
Sbjct: 62 YGVV--LTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK--- 116
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS---ELAGTYGYVAPELAYTMK 868
+HRD++++N+LL + + + DFG + L + ++ L + + APE T
Sbjct: 117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRT 176
Query: 869 VTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
+ DV+ FGV E+ G+ P LS G+ + + ID + RL P
Sbjct: 177 FSHASDVWMFGVTLWEMFTYGEEPWAGLS--------GSQILKKIDKEGE-RLERP---- 223
Query: 928 GVEDKLKSIIEVALSCVDANPERRP 952
E + I V L C NP RP
Sbjct: 224 --EACPQDIYNVMLQCWAHNPADRP 246
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 84.6 bits (209), Expect = 4e-18
Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 43/277 (15%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG G +G V+ VA+K + +++F+ E + + + H +V+ YG C
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIRE---GAMSEEDFIEEAQVMMKLSHPKLVQLYGVC 68
Query: 757 SHARHSFLVYEYLERGSLARIL-------SSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ LV+E++E G L+ L S ET M ++V +G+A Y+
Sbjct: 69 TERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGM----CLDVCEGMA----YLESSN 120
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT---YGYVAPELAYT 866
++HRD++++N L+ VSDFG + + D ++ GT + +PE+
Sbjct: 121 ---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD--QYTSSTGTKFPVKWSSPEVFSF 175
Query: 867 MKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925
K + K DV+SFGVL EV +G+ P + S+ + + E I+ F RL P L
Sbjct: 176 SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--------SEVVETINAGF--RLYKPRL 225
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+S+ E+ C PE RP+ ++ L+
Sbjct: 226 AS------QSVYELMQHCWKERPEDRPSFSLLLHQLA 256
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 5e-18
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 22/263 (8%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG+G +G V+K V K+ ++ EI L+ + K+YG
Sbjct: 12 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 71
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+++ EYL GS +L A D + ++K + L Y+H E + +HR
Sbjct: 72 LKGTKLWIIMEYLGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEKK---IHR 125
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVY 876
D+ + NVLL + + ++DFG A L + GT ++APE+ K D++
Sbjct: 126 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIW 185
Query: 877 SFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSI 936
S G+ A+E+ KG+ P ++M+ + PP L + K
Sbjct: 186 SLGITAIELAKGEPPN-------------SDMHPMRVLFLIPKNNPPTL---TGEFSKPF 229
Query: 937 IEVALSCVDANPERRPNMQIVCK 959
E +C++ +P RP + + K
Sbjct: 230 KEFIDACLNKDPSFRPTAKELLK 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 85.8 bits (212), Expect = 5e-18
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 39/266 (14%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQK--EFLSEIKALTGVRHRNIVKFY 753
IG G +G+VY A + + VAVKK+ S++G+ T++K + + E+K L ++H N +++
Sbjct: 29 IGHGSFGAVYFATNSHTNEVVAVKKM-SYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK 87
Query: 754 GFCSHARHS-FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
G C H+ +LV EY GS + +L + + + G L+Y+H
Sbjct: 88 G-CYLKEHTAWLVMEYC-LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHN--- 141
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE- 871
++HRD+ + N+LL + ++DFG+A P +S GT ++APE+ M +
Sbjct: 142 MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANS----FVGTPYWMAPEVILAMDEGQY 197
Query: 872 --KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN--EAIDHMFDARLPPPWLEV 927
K DV+S G+ +E L++ P NMN A+ H+ A+ P L+
Sbjct: 198 DGKVDVWSLGITCIE-------------LAERKPPLFNMNAMSALYHI--AQNDSPTLQS 242
Query: 928 GV-EDKLKSIIEVALSCVDANPERRP 952
D + ++ C+ P+ RP
Sbjct: 243 NEWTDSFRGFVDY---CLQKIPQERP 265
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 84.9 bits (211), Expect = 5e-18
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 30/219 (13%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGV-RHRNIVKFY 753
IG G + +V A E + A+K L + K E + LT + H I+K Y
Sbjct: 9 IGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLY 68
Query: 754 GFCSHARHS-FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
+ + + V EY G L + + + + ++ + AL Y+H
Sbjct: 69 -YTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTR--FYAAEILLALEYLH---SKG 122
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA------------------- 853
I+HRD+ +N+LLD + ++DFGTAK+L P+SS S
Sbjct: 123 IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASF 182
Query: 854 -GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
GT YV+PEL + D+++ G + +++ G+ P
Sbjct: 183 VGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 6e-18
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 50/291 (17%)
Query: 697 IGRGGYGSVYKAEL----PSGDT--VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G V+ AE P+ D VAVK L T +K+F E + LT ++H +IV
Sbjct: 13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIV 70
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSS--------------ETATEMDWSKRVNVIK 796
KFYG C +V+EY++ G L + L + + E+ S+ +++
Sbjct: 71 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 130
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-- 854
+A + Y+ + VHRD++++N L+ + DFG ++ + S+++ + G
Sbjct: 131 QIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVY--STDYYRVGGHT 185
Query: 855 --TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEA 911
++ PE K T + DV+SFGV+ E+ G+ P LS+ E
Sbjct: 186 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-----------TEV 234
Query: 912 IDHMFDAR-LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
I+ + R L P + K + ++ L C P++R N++ + K+L
Sbjct: 235 IECITQGRVLERPRV------CPKEVYDIMLGCWQREPQQRLNIKEIYKIL 279
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 8e-18
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 32/287 (11%)
Query: 690 NFDESFCIGRGGYGSVYKAELP-----SGDT-VAVKKLHSFTGETTHQKEFLSEIKALTG 743
N E +GRG +G V+ A+ G+T V VK L T + Q EF E+
Sbjct: 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQK-TKDENLQSEFRRELDMFRK 64
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL-SSETATEMDWSKRVNVIKGVA--H 800
+ H+N+V+ G C A +++ EY + G L + L ++++ E ++ + VA
Sbjct: 65 LSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCT 124
Query: 801 ALSY-MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG-- 857
++ M H VHRD++++N L+ + E VS +K +S + +L
Sbjct: 125 QIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSK--DVYNSEYYKLRNALIPL 182
Query: 858 -YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916
++APE + K DV+SFGVL EV + LP ++ D
Sbjct: 183 RWLAPEAVQEDDFSTKSDVWSFGVLMWEV------------FTQGELPFYGLS---DEEV 227
Query: 917 DARLPPPWLEVGVEDKL-KSIIEVALSCVDANPERRPNMQIVCKLLS 962
RL LE+ V + + ++ C NP+ RP+ + L
Sbjct: 228 LNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 84.5 bits (210), Expect = 9e-18
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG VYKA +G+ VA+KK+ + + EIK L +RH NIV+
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEI 66
Query: 756 C-SHARHS-FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYMHHEC 809
S + S ++V+EY++ L +L S E+ ++ + IK L Y+H
Sbjct: 67 VTSKGKGSIYMVFEYMDH-DLTGLLDS---PEVKFT--ESQIKCYMKQLLEGLQYLHSN- 119
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS-NWSELAGTYGYVAPEL----- 863
I+HRD+ N+L++ + ++DFG A+ +S +++ T Y PEL
Sbjct: 120 --GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGAT 177
Query: 864 AYTMKVTEKCDVYSFGVLALEVIKG 888
Y +V D++S G + E+ G
Sbjct: 178 RYGPEV----DMWSVGCILAELFLG 198
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 84.3 bits (208), Expect = 1e-17
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 697 IGRGGYGSVYKAE----LPSGDT--VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G V+ AE LP D VAVK L + E+ Q +F E + LT ++H++IV
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQ-DFQREAELLTVLQHQHIV 70
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSS-------------ETATEMDWSKRVNVIKG 797
+FYG C+ R +V+EY+ G L R L S ++ + + +
Sbjct: 71 RFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQ 130
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG--- 854
+A + Y+ VHRD++++N L+ + DFG ++ + S+++ + G
Sbjct: 131 IASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRTM 185
Query: 855 -TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSS 897
++ PE K T + D++SFGV+ E+ G+ P LS+
Sbjct: 186 LPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 84.7 bits (209), Expect = 1e-17
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFL-SEIKALTGVRHRNIVKFYG 754
IG G G V A E +G VAVKK+ ++E L +E+ + H N+V Y
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMDL---RKQQRRELLFNEVVIMRDYHHENVVDMYN 86
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
++V E+LE G+L I+ T T M+ + V V ALSY+H++ ++
Sbjct: 87 SYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQ---GVI 140
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCD 874
HRD+ S ++LL + +SDFG + + L GT ++APE+ + + D
Sbjct: 141 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVD 200
Query: 875 VYSFGVLALEVIKGQHP 891
++S G++ +E+I G+ P
Sbjct: 201 IWSLGIMVIEMIDGEPP 217
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 84.3 bits (208), Expect = 1e-17
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFL-SEIKALTGVRHRN 748
D IG G G V A + SG VAVKK+ ++E L +E+ + +H N
Sbjct: 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDL---RKQQRRELLFNEVVIMRDYQHEN 78
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
+V+ Y ++V E+LE G+L I+ T T M+ + V V ALS +H +
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLKALSVLHAQ 135
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMK 868
++HRD+ S ++LL + +SDFG + + L GT ++APEL +
Sbjct: 136 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP 192
Query: 869 VTEKCDVYSFGVLALEVIKGQHP 891
+ D++S G++ +E++ G+ P
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 84.0 bits (207), Expect = 1e-17
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 47/288 (16%)
Query: 697 IGRGGYGSVYKAEL----PSGDT--VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G V+ AE P D VAVK L + +K+F E + LT ++H +IV
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA--RKDFHREAELLTNLQHEHIV 70
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSE-----------TATEMDWSKRVNVIKGVA 799
KFYG C +V+EY++ G L + L + E+ S+ +++ + +A
Sbjct: 71 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIA 130
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG----T 855
+ Y+ + VHRD++++N L+ + DFG ++ + S+++ + G
Sbjct: 131 AGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVY--STDYYRVGGHTMLP 185
Query: 856 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDH 914
++ PE K T + DV+S GV+ E+ G+ P LS+ NE I+
Sbjct: 186 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----------NEVIEC 234
Query: 915 MFDAR-LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+ R L P K + ++ L C P R N++ + LL
Sbjct: 235 ITQGRVLQRP------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLL 276
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 82.8 bits (204), Expect = 2e-17
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 27/268 (10%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G+G +G V+ VA+K L T + FL E + + +RH +V Y
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTLKP---GTMMPEAFLQEAQIMKKLRHDKLVPLYAVV 70
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
S ++V E++ +GSL L + + V++ +A ++Y+ R +HR
Sbjct: 71 SE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHR 126
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKCDV 875
D+ + N+L+ ++DFG A+L++ + + A + APE A + T K DV
Sbjct: 127 DLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186
Query: 876 YSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKL 933
+SFG+L E++ KG+ P PG E ++ + R+P P +
Sbjct: 187 WSFGILLTELVTKGRVP-----------YPGMVNREVLEQVERGYRMPCP------QGCP 229
Query: 934 KSIIEVALSCVDANPERRPNMQIVCKLL 961
+S+ E+ C +P+ RP + + L
Sbjct: 230 ESLHELMKLCWKKDPDERPTFEYIQSFL 257
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 83.2 bits (205), Expect = 3e-17
Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 24/264 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG+G +G VYK + + + VA+K + E ++ EI L+ I ++YG
Sbjct: 12 IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAED-EIEDIQQEITVLSQCDSPYITRYYGS 70
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+++ EYL GS +L E + +++ + L Y+H E + +H
Sbjct: 71 YLKGTKLWIIMEYLGGGSALDLLKPGPLEE---TYIATILREILKGLDYLHSERK---IH 124
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDV 875
RD+ + NVLL + + ++DFG A L + GT ++APE+ K D+
Sbjct: 125 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADI 184
Query: 876 YSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKS 935
+S G+ A+E+ KG+ P L + L N PP LE K
Sbjct: 185 WSLGITAIELAKGEPPNSDLHPMRVLFLIPKN-------------SPPTLEGQYSKPFKE 231
Query: 936 IIEVALSCVDANPERRPNMQIVCK 959
+E +C++ +P RP + + K
Sbjct: 232 FVE---ACLNKDPRFRPTAKELLK 252
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 82.0 bits (202), Expect = 4e-17
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V+ + VAVK L T + FL E + ++H +V+ Y
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVKTLKP---GTMSVQAFLEEANLMKTLQHDKLVRLYAVV 70
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ +++ EY+ +GSL L S+ ++ K ++ +A ++Y+ R +HR
Sbjct: 71 TKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHR 127
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKCDV 875
D+ + NVL+ ++DFG A++++ + E A + APE T K DV
Sbjct: 128 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 187
Query: 876 YSFGVLALEVIK-------GQHPKDLLSSLS 899
+SFG+L E++ G D++S+L
Sbjct: 188 WSFGILLYEIVTYGKIPYPGMSNSDVMSALQ 218
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 81.5 bits (202), Expect = 5e-17
Identities = 65/203 (32%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 697 IGRGGYGSVYKAEL-PSGDTVA---VKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G GG+G V ++ T A VKK H ET Q+ SE + L H IVK
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV--ETGQQEHIFSEKEILEECNHPFIVKL 58
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
Y ++ +++ EY G L IL D I V A Y+H+
Sbjct: 59 YRTFKDKKYIYMLMEYCLGGELWTILRDRGL--FDEYTARFYIACVVLAFEYLHNR---G 113
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL----AYTMK 868
I++RD+ +N+LLD + DFG AK LK W+ GT YVAPE+ Y
Sbjct: 114 IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT-FCGTPEYVAPEIILNKGYDFS 172
Query: 869 VTEKCDVYSFGVLALEVIKGQHP 891
V D +S G+L E++ G+ P
Sbjct: 173 V----DYWSLGILLYELLTGRPP 191
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 81.9 bits (202), Expect = 5e-17
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 32/274 (11%)
Query: 697 IGRGGYGSVY--KAELPSGD--TVAVKKLHSFTGETTHQK-EFLSEIKALTGVRHRNIVK 751
IG G +G V + +LP VA+K L + G T Q+ +FLSE + H NI+
Sbjct: 12 IGAGEFGEVCSGRLKLPGKREIPVAIKTLKA--GYTEKQRRDFLSEASIMGQFDHPNIIH 69
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G + ++ +V EY+E GSL L + + V +++G+A + Y+
Sbjct: 70 LEGVVTKSKPVMIVTEYMENGSLDAFLRKHDG-QFTVIQLVGMLRGIASGMKYLSDM--- 125
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD-SSNWSELAGTYG--YVAPELAYTMK 868
VHRD++++N+L++ VSDFG +++L+ D + ++ G + APE K
Sbjct: 126 GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 185
Query: 869 VTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
T DV+S+G++ EV+ G+ P +S+ ++ +AI+ + RLP P
Sbjct: 186 FTSASDVWSYGIVMWEVMSYGERPYWEMSN--------QDVIKAIEEGY--RLPAPM--- 232
Query: 928 GVEDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
D ++ ++ L C + RP QIV L
Sbjct: 233 ---DCPAALHQLMLDCWQKDRNERPKFEQIVSIL 263
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 6e-17
Identities = 71/284 (25%), Positives = 110/284 (38%), Gaps = 55/284 (19%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYG 754
IG G YG VYKA +G VA+K + ++E E L H NI FYG
Sbjct: 14 IGEGTYGKVYKARHKKTGQLVAIKIMDI---IEDEEEEIKEEYNILRKYSNHPNIATFYG 70
Query: 755 FCSHARHS------FLVYEYLERGSLARILSSETATEMDWSKRVNVI----KGVAHALSY 804
+LV E GS+ ++ + + I + L+Y
Sbjct: 71 AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKG--LRKKGKRLKEEWIAYILRETLRGLAY 128
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
+H ++HRD+ +N+LL E + DFG + L + GT ++APE+
Sbjct: 129 LH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVI 185
Query: 865 YTMKVTE-----KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD-A 918
+ + + DV+S G+ A+E+ G+ P L D + +F
Sbjct: 186 ACDEQPDASYDARSDVWSLGITAIELADGKPP------LCDM--------HPMRALFKIP 231
Query: 919 RLPPPWLEVGVEDKLKS-------IIEVALSCVDANPERRPNMQ 955
R PPP LKS + C+ N E+RP M+
Sbjct: 232 RNPPP--------TLKSPENWSKKFNDFISECLIKNYEQRPFME 267
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 81.5 bits (201), Expect = 8e-17
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 697 IGRGGYGSVYKA-ELPSGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G+V+K +P GD+ VA+K + +G T Q E + A+ + H IV+
Sbjct: 15 LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQ-EITDHMLAMGSLDHAYIVR 73
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G C A LV + GSL + + +D + +N +A + Y+
Sbjct: 74 LLGICPGASLQ-LVTQLSPLGSLLDHVRQHRDS-LDPQRLLNWCVQIAKGMYYLEEHR-- 129
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKV 869
+VHR+++++N+LL + ++DFG A LL PD +SE ++A E +
Sbjct: 130 -MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRY 188
Query: 870 TEKCDVYSFGVLALEVIK-GQHP 891
T + DV+S+GV E++ G P
Sbjct: 189 THQSDVWSYGVTVWEMMSYGAEP 211
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 1e-16
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 27/268 (10%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V+ VA+K L + + FL+E + ++H +V+ Y
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP---EAFLAEANLMKQLQHPRLVRLYAVV 70
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ +++ EY+E GSL L + ++ +K +++ +A ++++ R +HR
Sbjct: 71 TQ-EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHR 126
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKCDV 875
D+ + N+L+ ++DFG A+L++ + E A + APE T K DV
Sbjct: 127 DLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 186
Query: 876 YSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKL 933
+SFG+L E++ G+ P PG E I ++ R+P P ++
Sbjct: 187 WSFGILLTEIVTYGRIP-----------YPGMTNPEVIQNLERGYRMPRP------DNCP 229
Query: 934 KSIIEVALSCVDANPERRPNMQIVCKLL 961
+ + E+ C PE RP + + +L
Sbjct: 230 EELYELMRLCWKEKPEERPTFEYLRSVL 257
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 2e-16
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 59/293 (20%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKE---FLSEIKALTGV-RH 746
+G G +G V KAE D TVAVK L + +K+ +SE++ + + +H
Sbjct: 20 LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLK----DDATEKDLSDLVSEMEMMKMIGKH 75
Query: 747 RNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG--------- 797
+NI+ G C+ ++V EY G+L L + S
Sbjct: 76 KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLV 135
Query: 798 -----VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852
VA + ++ + +HRD++++NVL+ ++ ++DFG A+ D +
Sbjct: 136 SFAYQVARGMEFLASK---KCIHRDLAARNVLVTEDHVMKIADFGLAR----DIHHIDYY 188
Query: 853 AGT------YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGA 906
T ++APE + T + DV+SFGVL E+ +L S PG
Sbjct: 189 RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIF----------TLGGSPYPGI 238
Query: 907 NMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM-QIV 957
+ E + + R+ P +L ++ C P +RP Q+V
Sbjct: 239 PVEELFKLLKEGYRMEKP---QNCTQELYHLM---RDCWHEVPSQRPTFKQLV 285
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 2e-16
Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 46/269 (17%)
Query: 697 IGRGGYGSVYKAELPSGDTV-----AVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
IG+G +G V + + K+ G + L+E + L + H +V
Sbjct: 8 IGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSV---RNVLNERRILQELNHPFLVN 64
Query: 752 F-YGFCSHARHSFLVYEYLERGSLARILS-----SETATEMDWSKRVNVIKGVAHALSYM 805
Y F + +LV + L G L LS SE + W I + AL Y+
Sbjct: 65 LWYSFQDE-ENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKF-W------ICEIVLALEYL 116
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY 865
H + I+HRD+ N+LLD + H++DF A + PD+ + +GT GY+APE+
Sbjct: 117 HSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLT-TSTSGTPGYMAPEVLC 172
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF---DARLPP 922
+ D +S GV A E ++G+ P S + I D P
Sbjct: 173 RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI---------RDQIRAKQETADVLYPA 223
Query: 923 PWLEVGVEDKLKSIIEVALSCVDANPERR 951
W + D + ++E +P++R
Sbjct: 224 TWSTEAI-DAINKLLER-------DPQKR 244
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 3e-16
Identities = 51/136 (37%), Positives = 67/136 (49%), Gaps = 26/136 (19%)
Query: 47 PCT-----WSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIP 101
PC WSG C ST K +D L L+ L G IP
Sbjct: 396 PCVPQQHPWSGADCQ---------FDSTKGKWFIDG-----------LGLDNQGLRGFIP 435
Query: 102 SPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNL 160
+ I L L+ +NLS N G IP +G +T+LEVL + N NGSIPE +G L+SL+ L
Sbjct: 436 NDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRIL 495
Query: 161 ALDGNHLDGPIPVSIG 176
L+GN L G +P ++G
Sbjct: 496 NLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 80.5 bits (198), Expect = 3e-16
Identities = 73/274 (26%), Positives = 138/274 (50%), Gaps = 41/274 (14%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQK--EFLSEIKALTGVRHRNIVKFY 753
IG G +G+VY A ++ + + VA+KK+ S++G+ +++K + + E+K L ++H N +++
Sbjct: 33 IGHGSFGAVYFARDVRTNEVVAIKKM-SYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYK 91
Query: 754 GFCSHARHSFLVYEYLERGSLARILS--SETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G ++LV EY GS + +L + E++ + + G L+Y+H
Sbjct: 92 GCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA---ITHGALQGLAYLHSH--- 144
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
++HRD+ + N+LL + ++DFG+A + P +S GT ++APE+ M +
Sbjct: 145 NMIHRDIKAGNILLTEPGQVKLADFGSASIASPANS----FVGTPYWMAPEVILAMDEGQ 200
Query: 872 ---KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN--EAIDHMFDARLPPPWLE 926
K DV+S G+ +E L++ P NMN A+ H+ A+ P L+
Sbjct: 201 YDGKVDVWSLGITCIE-------------LAERKPPLFNMNAMSALYHI--AQNESPTLQ 245
Query: 927 VGV-EDKLKSIIEVALSCVDANPERRPNMQIVCK 959
D ++ ++ SC+ P+ RP + + K
Sbjct: 246 SNEWSDYFRNFVD---SCLQKIPQDRPTSEELLK 276
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 4e-16
Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 58/286 (20%)
Query: 689 NNFDESFCIGRGGYGSVYKA------------ELPSGDTVAVKKLHSFTGETTHQKEFLS 736
+ E +G+G YG VY A E+P D+ V+ LH
Sbjct: 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHE------------- 54
Query: 737 EIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVI- 795
EI + ++HRNIV++ G S + E + GSL+ +L S+ D + +
Sbjct: 55 EIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYT 114
Query: 796 KGVAHALSYMHHECRPPIVHRDVSSKNVLLD-FEYEAHVSDFGTAKLLKPDSSNWSELAG 854
K + L Y+H IVHRD+ NVL++ + +SDFGT+K L + G
Sbjct: 115 KQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTG 171
Query: 855 TYGYVAPELAYTMKVTEK--------CDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGA 906
T Y+APE V +K D++S G +E+ G+ P L P A
Sbjct: 172 TLQYMAPE------VIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE------PQA 219
Query: 907 NMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
M + MF P + + K+ I L C + +P++R
Sbjct: 220 AMFKV--GMFKIHPEIP---ESLSAEAKNFI---LRCFEPDPDKRA 257
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 5e-16
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 697 IGRGGYGSVYKA---ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
+G G +G+V K S TVAVK L + + + E L E + + + IV+
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62
Query: 754 GFCSHARHSFLVYEYLERGSLARILS-SETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
G C A LV E E G L + L ++ TE + ++ V+ V+ + Y+
Sbjct: 63 GIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVH---QVSMGMKYLEET---N 115
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG-----YVAPELAYTM 867
VHRD++++NVLL ++ A +SDFG +K L D + + A T+G + APE
Sbjct: 116 FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK--AKTHGKWPVKWYAPECMNYY 173
Query: 868 KVTEKCDVYSFGVLALEVIK-GQHP 891
K + K DV+SFGVL E GQ P
Sbjct: 174 KFSSKSDVWSFGVLMWEAFSYGQKP 198
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 79.1 bits (196), Expect = 6e-16
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 41/285 (14%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G G YG VYKA + +G+ VA+KK+ E L EI L ++H NIVK
Sbjct: 6 KLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLD 65
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVA----HALSYMHHECR 810
R +LV+EY + L + L + N+IK + L+Y H
Sbjct: 66 VIHTERKLYLVFEYCDM-DLKKYLDK-RPGPLS----PNLIKSIMYQLLRGLAYCHSHR- 118
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL-----AY 865
I+HRD+ +N+L++ + ++DFG A+ ++ T Y APE+ Y
Sbjct: 119 --ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHY 176
Query: 866 TMKVTEKCDVYSFGVLALEVIKG-----------QHPK--DLLSSLSDSSLPGANMNEAI 912
+ V D++S G + E+I G Q K +L + ++ S PG
Sbjct: 177 STAV----DIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDY 232
Query: 913 DHMFDARLPPPWLEV--GVEDKLKSIIEVALSCVDANPERRPNMQ 955
F P +V ++ + ++ L NP +R + +
Sbjct: 233 KPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQY---NPAKRISAK 274
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 6e-16
Identities = 59/267 (22%), Positives = 121/267 (45%), Gaps = 25/267 (9%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V+ A VAVK + + FL+E + ++H +VK +
Sbjct: 14 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVKLHAVV 70
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ +++ E++ +GSL L S+ ++ K ++ +A ++++ +HR
Sbjct: 71 TK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHR 126
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKCDV 875
D+ + N+L+ ++DFG A++++ + E A + APE T K DV
Sbjct: 127 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 186
Query: 876 YSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLK 934
+SFG+L +E++ G+ P +S+ + A++ + R+P E+ +
Sbjct: 187 WSFGILLMEIVTYGRIPYPGMSN--------PEVIRALERGY--RMPR------PENCPE 230
Query: 935 SIIEVALSCVDANPERRPNMQIVCKLL 961
+ + + C PE RP + + +L
Sbjct: 231 ELYNIMMRCWKNRPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 7e-16
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 215 LRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNL 274
LRG IP+ LR L + LS N + G+IP +G++ L L LS N G++P SL L
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 275 SSLEILHLYDNQLSGHIPQEIG 296
+SL IL+L N LSG +P +G
Sbjct: 490 TSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 43/285 (15%)
Query: 697 IGRGGYGSVYKAEL--PSGDTVAVKKL---HSFTGETTHQKE-----FLSEIKALT-GVR 745
+G G +G VYK + +A+K++ + G+ +++ +SE+ + +R
Sbjct: 8 LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67
Query: 746 HRNIVKFYGFCSHARHSFLVYEYLERGSLARILSS-----ETATEMDWSKRV-NVIKGVA 799
H NIV++Y ++V + +E L +S + TE +R+ N+ +
Sbjct: 68 HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTE----ERIWNIFVQMV 123
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV 859
AL Y+H E R IVHRD++ N++L + + ++DFG AK +P+S S + GT Y
Sbjct: 124 LALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTS-VVGTILYS 180
Query: 860 APELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919
PE+ EK DV++FG + ++ Q P NM + +A
Sbjct: 181 CPEIVKNEPYGEKADVWAFGCILYQMCTLQPP-----------FYSTNMLSLATKIVEAV 229
Query: 920 LPPPWLEVGVEDKLKS--IIEVALSCVDANPERRPNMQIVCKLLS 962
P + + + S + +V SC+ + E RP++ V ++S
Sbjct: 230 YEP------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-15
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 688 INNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQK---EFLSEIKALTG 743
+ NF IG+G + VYKA L G VA+KK+ F E K + L EI L
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIF--EMMDAKARQDCLKEIDLLKQ 58
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILS--SETATEMDWSKRVNVIKGVAHA 801
+ H N++K+ +V E + G L+R++ + + + A
Sbjct: 59 LDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSA 118
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAP 861
L +MH + I+HRD+ NV + + D G + ++ L GT Y++P
Sbjct: 119 LEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 175
Query: 862 ELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
E + K D++S G L E+ Q P
Sbjct: 176 ERIHENGYNFKSDIWSLGCLLYEMAALQSP 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 2e-15
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G VYKA+ A K+ ++F+ EI L+ +H NIV Y
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQI-ESEEELEDFMVEIDILSECKHPNIVGLYEAY 71
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ +++ E+ + G+L I+ E + + V + + AL+++H ++HR
Sbjct: 72 FYENKLWILIEFCDGGALDSIML-ELERGLTEPQIRYVCRQMLEALNFLH---SHKVIHR 127
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY--TMKVTE--- 871
D+ + N+LL + + ++DFG + K GT ++APE+ T K
Sbjct: 128 DLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDY 187
Query: 872 KCDVYSFGVLALEVIKGQHP 891
K D++S G+ +E+ + + P
Sbjct: 188 KADIWSLGITLIELAQMEPP 207
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 2e-15
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 58/300 (19%)
Query: 682 EEIIRSINNFDESFCIGRGGYGSVYKAEL--PSGD----TVAVKKLHSFTGETTHQKEFL 735
E + ++ +E +G G +G VYK EL P+ +VA+K L E Q+EF
Sbjct: 1 EIPLSAVRFLEE---LGEGAFGKVYKGELTGPNERLSATSVAIKTLKE-NAEPKVQQEFR 56
Query: 736 SEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSS--------------E 781
E + ++ ++H NIV G C+ + + +++EYL G L L
Sbjct: 57 QEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDET 116
Query: 782 TATEMDWSKRVNVIKGVAHALSYM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839
+ +D S +++ +A + Y+ HH VHRD++++N L+ +SDFG +
Sbjct: 117 VKSSLDCSDFLHIAIQIAAGMEYLSSHH-----FVHRDLAARNCLVGEGLTVKISDFGLS 171
Query: 840 KLLKPDSSNWSELAGT----YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDL 894
+ + S+++ + ++ PE K T + D++SFGV+ E+ G P
Sbjct: 172 RDIY--SADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP--- 226
Query: 895 LSSLSDSSLPGANMNEAIDHMFDAR--LPPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
G + E I+ M +R LP P ED + + + C + P RRP
Sbjct: 227 --------YYGFSNQEVIE-MIRSRQLLPCP------EDCPARVYALMIECWNEIPARRP 271
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 3e-15
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 697 IGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G YG V + G +KKL+ +K E + L+ ++H NIV +
Sbjct: 8 VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAY--- 64
Query: 756 CSHARHS--------FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
R S ++V + E G L L + + ++ V +A AL Y+H
Sbjct: 65 ----RESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE 120
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
+ I+HRD+ ++NV L V D G A++L+ S L GT Y++PEL
Sbjct: 121 K---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNK 177
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP-PWLE 926
K DV++ G E+ +H + +MN + + + +LPP P
Sbjct: 178 PYNYKSDVWALGCCVYEMATLKH-----------AFNAKDMNSLVYRIIEGKLPPMP--- 223
Query: 927 VGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+D + E+ + + PE+RP+++
Sbjct: 224 ---KDYSPELGELIATMLSKRPEKRPSVK 249
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 3e-15
Identities = 70/260 (26%), Positives = 107/260 (41%), Gaps = 46/260 (17%)
Query: 716 VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLA 775
VAVK L +++FL E+K L+ + NI + G C+ ++ EY+E G L
Sbjct: 49 VAVKVLRP-DASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLN 107
Query: 776 RILSSETATEMDWSKRVNVIKGVAHALSYM---------HHECRPPIVHRDVSSKNVLLD 826
+ L A + + L YM + E VHRD++++N L+
Sbjct: 108 QFLQKHVAETSGLACNSKSLS--FSTLLYMATQIASGMRYLESL-NFVHRDLATRNCLVG 164
Query: 827 FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAP------ELAYTMKVTEKCDVYSFGV 880
Y ++DFG ++ L SS++ + G P E K T K DV++FGV
Sbjct: 165 KNYTIKIADFGMSRNLY--SSDYYRVQGR--APLPIRWMAWESVLLGKFTTKSDVWAFGV 220
Query: 881 LALEVI---KGQHPKDLLSSLSDSSLPGANMNEAIDHMF--DAR---LPPPWLEVGVEDK 932
E++ + Q P L+D + E H F D R LP P +
Sbjct: 221 TLWEILTLCREQ-P---YEHLTDQQ-----VIENAGHFFRDDGRQIYLPRP------PNC 265
Query: 933 LKSIIEVALSCVDANPERRP 952
K I E+ L C + E RP
Sbjct: 266 PKDIYELMLECWRRDEEDRP 285
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 4e-15
Identities = 80/271 (29%), Positives = 116/271 (42%), Gaps = 41/271 (15%)
Query: 697 IGRGGYGSVYKAELPSGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
IG+G +G VY L D AVK L+ T + ++FL E + H N++
Sbjct: 3 IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSL 61
Query: 753 YGFCSHARHSFLV-YEYLERGSLARILSSET--ATEMDW-SKRVNVIKGVAHALSYMHHE 808
G C + S LV Y++ G L + SET T D + V KG M +
Sbjct: 62 LGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKG-------MEYL 114
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG-----YVAPEL 863
VHRD++++N +LD + V+DFG A+ + D +S T ++A E
Sbjct: 115 ASKKFVHRDLAARNCMLDESFTVKVADFGLARDIY-DKEYYSVHNHTGAKLPVKWMALES 173
Query: 864 AYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLP 921
T K T K DV+SFGVL E++ +G P P + + ++ RL
Sbjct: 174 LQTQKFTTKSDVWSFGVLLWELMTRGAPP-----------YPDVDSFDITVYLLQGRRLL 222
Query: 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
P E + EV LSC PE RP
Sbjct: 223 QP------EYCPDPLYEVMLSCWHPKPEMRP 247
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 76.1 bits (187), Expect = 4e-15
Identities = 71/290 (24%), Positives = 112/290 (38%), Gaps = 48/290 (16%)
Query: 697 IGRGGYGSVYKAELPSGDTVA---VKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
IG G +G V E G + A VK+L + + Q FL E++ + H N+++
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRA-SATPDEQLLFLQEVQPYRELNHPNVLQCL 61
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATE-MDWSKRV------NVIKGVAHALSYMH 806
G C + LV E+ G L L S K V V G+ +H
Sbjct: 62 GQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLW----LH 117
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP------DSSNWSELAGTYGYVA 860
+ +H D++ +N L + + D+G A P + L ++A
Sbjct: 118 ---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLR----WLA 170
Query: 861 PELA-------YTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAI 912
PEL T+K +++S GV E+ P LSD + + E
Sbjct: 171 PELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQP---YPDLSDEQVLKQVVREQ- 226
Query: 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
D +LP P L++ D+ EV C +PE RP + V +LL+
Sbjct: 227 ----DIKLPKPQLDLKYSDRW---YEVMQFCW-LDPETRPTAEEVHELLT 268
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 5e-15
Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 76 DQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLT-KLKFLNLSSNHFSGKIPSEIGLLTNL 134
+ ++L+ LDL+ N + +IP IG L LK L+LS N +PS + L NL
Sbjct: 108 NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNL 165
Query: 135 EVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
+ L + N L+ + +LS+L NL L GN + +P I LS+L L L NNS+
Sbjct: 166 KNLDLSFNDLSDLPKLLSNLSNLNNLDLSGNKI-SDLPPEIELLSALEELDLSNNSII-E 223
Query: 195 IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLT 254
+ SS+ NL NL L L N L +P S G L L L+LSNNQ+S SI +G+L L
Sbjct: 224 LLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-SIS-SLGSLTNLR 280
Query: 255 DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314
+L LS N L +P L LE+L N L E+ L + ++ N T
Sbjct: 281 ELDLSGNSLSNALPLIALLLLLLELL---LNLLLTLKALELKLNSILLNNNILSNGETS- 336
Query: 315 LPQNICQSGSLQYFSVHDN 333
P+ + SL DN
Sbjct: 337 SPEALSILESLNNLWTLDN 355
|
Length = 394 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 6e-15
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG V+K +G VA+KK + +K L EI+ L ++H N+V
Sbjct: 9 IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEV 68
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKR-------VNVIKGVAHALSYMH-H 807
R LV+EY + L E++ + R +I A+++ H H
Sbjct: 69 FRRKRKLHLVFEYCDHTVL---------NELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH 119
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL---- 863
C +HRDV +N+L+ + + + DFG A++L ++++ T Y APEL
Sbjct: 120 NC----IHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGD 175
Query: 864 -AYTMKVTEKCDVYSFGVLALEVIKGQ 889
Y V DV++ G + E++ GQ
Sbjct: 176 TQYGPPV----DVWAIGCVFAELLTGQ 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 7e-15
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 697 IGRGGYGSV----YKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G +G V YK D VA+K L + E + + E + E + + + + IV+
Sbjct: 3 LGSGNFGCVKKGVYKMRKKQID-VAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRM 60
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
G C A LV E G L + LS + E+ S V ++ V+ + Y+ +
Sbjct: 61 IGVC-EAEALMLVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGK---N 115
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG-----YVAPELAYTM 867
VHRD++++NVLL ++ A +SDFG +K L D S + A + G + APE
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK--ARSAGKWPLKWYAPECINFR 173
Query: 868 KVTEKCDVYSFGVLALEVIK-GQHP 891
K + + DV+S+G+ E GQ P
Sbjct: 174 KFSSRSDVWSYGITMWEAFSYGQKP 198
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 7e-15
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQ---KEFLSEIKALTGVRHRNIVKF 752
+G G +GSVY+ L GD AVK++ T Q K+ EI L+ ++H NIV++
Sbjct: 8 LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
G + ++ E + GSLA++L + + + L Y+H
Sbjct: 68 LGTEREEDNLYIFLELVPGGSLAKLLKKYGS--FPEPVIRLYTRQILLGLEYLHDR---N 122
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL-----AYTM 867
VHRD+ N+L+D ++DFG AK + S S G+ ++APE+ Y +
Sbjct: 123 TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS-FKGSPYWMAPEVIAQQGGYGL 181
Query: 868 KVTEKCDVYSFGVLALEVIKGQHP 891
D++S G LE+ G+ P
Sbjct: 182 AA----DIWSLGCTVLEMATGKPP 201
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 8e-15
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 21/208 (10%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKK--LHS---FTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G+G YG+VY G +AVK+ L + E ++K E+ L ++H NIV+
Sbjct: 8 LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEK-LQEEVDLLKSLKHVNIVQ 66
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETA-TEMDWSKRV-NVIKGVAHALSYMHHEC 809
+ G C + E++ GS++ IL+ E + K ++ GVA Y+H+ C
Sbjct: 67 YLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVA----YLHNNC 122
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE------LAGTYGYVAPEL 863
+VHRD+ NV+L + DFG A+ L + + + GT ++APE+
Sbjct: 123 ---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEV 179
Query: 864 AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
K D++S G E+ G+ P
Sbjct: 180 INESGYGRKSDIWSIGCTVFEMATGKPP 207
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 1e-14
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 697 IGRGGYGSVYKAEL----PSGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN 748
+G G +G K EL P GD VAVK L +G H + EI+ L + H N
Sbjct: 12 LGEGHFG---KVELCRYDPEGDNTGEQVAVKSLKPESGGN-HIADLKKEIEILRNLYHEN 67
Query: 749 IVKFYGFCSH--ARHSFLVYEYLERGSLARILSSETA-----TEMDWSKRVNVIKGVAHA 801
IVK+ G C+ L+ E+L GSL L ++ ++ V + KG+ +
Sbjct: 68 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYA--VQICKGMDYL 125
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS---ELAGTYGY 858
S + VHRD++++NVL++ E++ + DFG K ++ D ++ +L +
Sbjct: 126 GSRQY-------VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFW 178
Query: 859 VAPELAYTMKVTEKCDVYSFGVLALEVI 886
APE K DV+SFGV E++
Sbjct: 179 YAPECLIQSKFYIASDVWSFGVTLYELL 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 1e-14
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G G+VYK P+G A+K ++ E T +++ EI+ L V H N+VK +
Sbjct: 82 IGSGAGGTVYKVIHRPTGRLYALKVIYG-NHEDTVRRQICREIEILRDVNHPNVVKCHDM 140
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
H ++ E+++ GSL E D +V + + ++Y+H R IVH
Sbjct: 141 FDHNGEIQVLLEFMDGGSL------EGTHIADEQFLADVARQILSGIAYLH---RRHIVH 191
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKP--DSSNWSELAGTYGYVAPE-----LAYTMK 868
RD+ N+L++ ++DFG +++L D N S GT Y++PE L +
Sbjct: 192 RDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSS--VGTIAYMSPERINTDLNHGAY 249
Query: 869 VTEKCDVYSFGVLALEVIKGQHP 891
D++S GV LE G+ P
Sbjct: 250 DGYAGDIWSLGVSILEFYLGRFP 272
|
Length = 353 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 2e-14
Identities = 39/89 (43%), Positives = 52/89 (58%)
Query: 183 GLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242
GL L N L G IP+ I L +L + L N +RG IP S G + L L+LS N +GS
Sbjct: 422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGS 481
Query: 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSL 271
IP+ +G L L L+L+ N L G VP++L
Sbjct: 482 IPESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 75.6 bits (187), Expect = 2e-14
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG- 754
IG G YG V A +G VA+KK+ + + K L EIK L +RH NI+
Sbjct: 8 IGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDI 67
Query: 755 FCSHARHSF----LVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYMHHE 808
+ F +V E +E L +++ S D + +++G L Y+H
Sbjct: 68 LRPPSPEDFNDVYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRG----LKYLH-- 120
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG---TYGYVAPEL-- 863
++HRD+ N+L++ + + DFG A+ + PD L T Y APEL
Sbjct: 121 -SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLL 179
Query: 864 ---AYTMKVTEKCDVYSFGVLALEVIKGQH 890
YT + D++S G + E++ +
Sbjct: 180 SSSRYTKAI----DIWSVGCIFAELLTRKP 205
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 74.2 bits (182), Expect = 2e-14
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 5/204 (2%)
Query: 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEF-LSEIKALTGVRHRN 748
++ IG G +G +Y A+ S V K T +KE E+ L ++H N
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
IV F+ F+V EY + G L + ++ + + ++ ++ L ++H
Sbjct: 61 IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR 120
Query: 809 CRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
I+HRD+ S+N+ L A + DFG A+ L GT Y++PE+
Sbjct: 121 ---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNR 177
Query: 868 KVTEKCDVYSFGVLALEVIKGQHP 891
K D++S G + E+ +HP
Sbjct: 178 PYNNKTDIWSLGCVLYELCTLKHP 201
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 3e-14
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 50/217 (23%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE---FLSEIKALTGVRHRNIVKF 752
+G G +G V SG A+K L + K+ L+E + L +RH +V
Sbjct: 9 LGTGSFGRVMLVRHKGSGKYYALKILSK--AKIVKLKQVEHVLNEKRILQSIRHPFLVNL 66
Query: 753 YGFCSHARHSFLVYEYLERGSL--------------ARILSSETATEMDWSKRVNVIKGV 798
YG + +LV EY+ G L AR +++ V
Sbjct: 67 YGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQ----------------V 110
Query: 799 AHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGY 858
AL Y+H IV+RD+ +N+LLD + ++DFG AK +K + ++ L GT Y
Sbjct: 111 VLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT--YT-LCGTPEY 164
Query: 859 VAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+APE+ Y V D ++ G+L E++ G P
Sbjct: 165 LAPEIILSKGYGKAV----DWWALGILIYEMLAGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 3e-14
Identities = 71/278 (25%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G YG VYKA L +G+ AVK + G+ + EI + +H NIV ++G
Sbjct: 17 VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQ--QEIFMVKECKHCNIVAYFGS 74
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
++ EY GSL I + + V + L+Y+H + + +H
Sbjct: 75 YLSREKLWICMEYCGGGSLQDIY--HVTGPLSELQIAYVCRETLQGLAYLHSKGK---MH 129
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMK---VTEK 872
RD+ N+LL + ++DFG A + + GT ++APE+A K +
Sbjct: 130 RDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQL 189
Query: 873 CDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDK 932
CD+++ G+ A+E+ + Q P L + A+ M + PP L +DK
Sbjct: 190 CDIWAVGITAIELAELQPPMFDLHPM-----------RALFLMSKSNFQPPKL----KDK 234
Query: 933 LK------SIIEVALSCVDANPERRPNMQIVCKLLSGQ 964
K + ++++L+ NP++RP + +LL+
Sbjct: 235 TKWSSTFHNFVKISLT---KNPKKRPTAE---RLLTHL 266
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 5e-14
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 34/209 (16%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR-------- 747
I +G +GSVY A+ +GD A+K L +K + +T V+
Sbjct: 4 ISKGAFGSVYLAKKRSTGDYFAIKVL---------KKSDMIAKNQVTNVKAERAIMMIQG 54
Query: 748 ---NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY 804
+ K Y + +LV EYL G A ++ + DW+K I V +
Sbjct: 55 ESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAK--QYIAEVVLGVED 112
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK--LLKPDSSNWSELAGTYGYVAPE 862
+H I+HRD+ +N+L+D ++DFG ++ L GT Y+APE
Sbjct: 113 LHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK------FVGTPDYLAPE 163
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+ + D +S G + E + G P
Sbjct: 164 TILGVGDDKMSDWWSLGCVIFEFLFGYPP 192
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 5e-14
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 32/278 (11%)
Query: 690 NFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHR 747
NF IGRG + VY+A L G VA+KK+ F + + + + EI L + H
Sbjct: 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
N++K+Y +V E + G L+R++ + ++ V K S + H
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEK-TVWKYFVQLCSALEH 121
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
++HRD+ NV + + D G + ++ L GT Y++PE +
Sbjct: 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 181
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN--------EAIDHMFDAR 919
K D++S G L E+ Q P G MN E D+
Sbjct: 182 GYNFKSDIWSLGCLLYEMAALQSP-----------FYGDKMNLYSLCKKIEQCDY----- 225
Query: 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIV 957
PP ++L+ ++ + C++ +PE+RP++ V
Sbjct: 226 --PPLPSDHYSEELRQLVNM---CINPDPEKRPDITYV 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 6e-14
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 689 NNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLS----EIKALTG 743
N+ +G+G +G VY ++ +G +AVK++ F ++ K+ ++ EI+ L
Sbjct: 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQV-PFDPDSPETKKEVNALECEIQLLKN 60
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALS 803
++H IV++YG + EY+ GS+ L + A +++ + + +
Sbjct: 61 LQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYT--RQILEGVE 118
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP---DSSNWSELAGTYGYVA 860
Y+H IVHRD+ N+L D + DFG +K L+ + + GT +++
Sbjct: 119 YLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMS 175
Query: 861 PELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
PE+ K DV+S G +E++ + P
Sbjct: 176 PEVISGEGYGRKADVWSVGCTVVEMLTEKPP 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 7e-14
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 28/217 (12%)
Query: 697 IGRGGYGSVYKAE------LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G V KA TVAVK L ++ ++ LSE L V H +++
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKE-NASSSELRDLLSEFNLLKQVNHPHVI 66
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARIL----------------SSETATEMDWSKRVNV 794
K YG CS L+ EY + GSL L + + + + + +
Sbjct: 67 KLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTM 126
Query: 795 IKGVAHALSY---MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851
++ A M + +VHRD++++NVL+ + +SDFG ++ + + S
Sbjct: 127 GDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKR 186
Query: 852 LAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 886
G ++A E + T + DV+SFGVL E++
Sbjct: 187 SKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 223
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 72.8 bits (178), Expect = 8e-14
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQK---EFLSEIKALTGVRHRNIVKF 752
+G G +G+VYK +P G+TV + ETT K EF+ E + + H ++V+
Sbjct: 15 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSE-----TATEMDWSKRVNVIKGVAHALSYMHH 807
G C LV + + G L + + ++W V + KG+ M+
Sbjct: 75 LGVCLSPTIQ-LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWC--VQIAKGM------MYL 125
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY--GYVAPELAY 865
E R +VHRD++++NVL+ ++DFG A+LL+ D ++ G ++A E +
Sbjct: 126 EERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 184
Query: 866 TMKVTEKCDVYSFGVLALEVIK-GQHPKD 893
K T + DV+S+GV E++ G P D
Sbjct: 185 YRKFTHQSDVWSYGVTIWELMTFGGKPYD 213
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 72.4 bits (177), Expect = 9e-14
Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 34/276 (12%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGF 755
+G G YG VYK +A K+ TG+ ++E EI L HRNI +YG
Sbjct: 14 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGA 71
Query: 756 CSHAR------HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+LV E+ GS+ ++ + + + + + LS++H
Sbjct: 72 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH- 130
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
++HRD+ +NVLL E + DFG + L + GT ++APE+ +
Sbjct: 131 --KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 188
Query: 870 TE-----KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924
+ K D++S G+ A+E+ +G P L D M+ R P P
Sbjct: 189 PDATYDFKSDLWSLGITAIEMAEGAPP------LCD-------MHPMRALFLIPRNPAPR 235
Query: 925 LEVGV-EDKLKSIIEVALSCVDANPERRPNMQIVCK 959
L+ K +S IE SC+ N +RP + + K
Sbjct: 236 LKSKKWSKKFQSFIE---SCLVKNHSQRPTTEQLMK 268
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 1e-13
Identities = 69/278 (24%), Positives = 112/278 (40%), Gaps = 43/278 (15%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G+G +G V+K L VAVK + K FLSE + L H NIVK G C
Sbjct: 3 LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIK-FLSEARILKQYDHPNIVKLIGVC 61
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE-CRPPIVH 815
+ + ++V E + G L + E+ + V A ++Y+ + C +H
Sbjct: 62 TQRQPIYIVMELVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNC----IH 116
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG----------YVAPELAY 865
RD++++N L+ +SDFG ++ E G Y + APE
Sbjct: 117 RDLAARNCLVGENNVLKISDFGMSR---------QEDDGIYSSSGLKQIPIKWTAPEALN 167
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924
+ + + DV+S+G+L E SL PG +A + + R+ P
Sbjct: 168 YGRYSSESDVWSYGILLWETF----------SLGVCPYPGMTNQQAREQVEKGYRMSCP- 216
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ + +V C D PE RP + K L+
Sbjct: 217 -----QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 1e-13
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 27/262 (10%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG VYKA + +G+ A+K + GE + EI + +H NIV ++G
Sbjct: 17 IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQ--QEIIMMKDCKHSNIVAYFGS 74
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
++ E+ GSL I + S+ V + L Y+H + + +H
Sbjct: 75 YLRRDKLWICMEFCGGGSLQDIY--HVTGPLSESQIAYVSRETLQGLYYLHSKGK---MH 129
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMK---VTEK 872
RD+ N+LL ++DFG + + + GT ++APE+A + +
Sbjct: 130 RDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQL 189
Query: 873 CDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE-- 930
CD+++ G+ A+E+ + Q P L + A+ M + PP L+ ++
Sbjct: 190 CDIWAVGITAIELAELQPPMFDLHPM-----------RALFLMTKSNFQPPKLKDKMKWS 238
Query: 931 DKLKSIIEVALSCVDANPERRP 952
+ +++AL+ NP++RP
Sbjct: 239 NSFHHFVKMALT---KNPKKRP 257
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 1e-13
Identities = 73/274 (26%), Positives = 118/274 (43%), Gaps = 46/274 (16%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G YGSVYK P+G T+A+K++ E+ + + E+ L IV FYG
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKF-NQIIMELDILHKAVSPYIVDFYGA 67
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATE-MDWSKRVNVIKGVAHALSYMHHECRPPIV 814
++ EY++ GSL ++ + ATE + + V L ++ E I+
Sbjct: 68 FFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--II 125
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE----------LA 864
HRDV NVL++ + + DFG + L + + G Y+APE
Sbjct: 126 HRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN--IGCQSYMAPERIKSGGPNQNPT 183
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHP------KDLLSSLSDSSLPGANMNEAIDHMFDA 918
YT+ + DV+S G+ LE+ G++P ++ + LS AI
Sbjct: 184 YTV----QSDVWSLGLSILEMALGRYPYPPETYANIFAQLS-----------AIVDG--- 225
Query: 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
PP L G D + + C++ P RRP
Sbjct: 226 --DPPTLPSGYSDDAQDFVA---KCLNKIPNRRP 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 2e-13
Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G YG VYK + +G A+K + E K ++ +K + HRNI +YG
Sbjct: 24 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS--HHRNIATYYGA 81
Query: 756 ------CSHARHSFLVYEYLERGSLARILSSETATEM--DWSKRV--NVIKGVAHALSYM 805
H +LV E+ GS+ ++ + + DW + +++G+AH +
Sbjct: 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL--HA 139
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY 865
H ++HRD+ +NVLL E + DFG + L + GT ++APE+
Sbjct: 140 HK-----VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 194
Query: 866 TMKVTE-----KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920
+ + + D++S G+ A+E+ +G P L D M+ R
Sbjct: 195 CDENPDATYDYRSDIWSLGITAIEMAEGAPP------LCD-------MHPMRALFLIPRN 241
Query: 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
PPP L+ + K I+ C+ N RP+ + + K
Sbjct: 242 PPPKLK--SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 2e-13
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 14/175 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEI---KALTGVRHRNIVKF 752
IG G YG+VYKA +L +G VA+KK+ E L EI K L H NIV+
Sbjct: 7 IGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRL 66
Query: 753 YGFC-----SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
C LV+E++++ LA LS + ++++ + + ++H
Sbjct: 67 LDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS 125
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE 862
IVHRD+ +N+L+ + + ++DFG A++ + + S + T Y APE
Sbjct: 126 HR---IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVV-TLWYRAPE 176
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 2e-13
Identities = 71/230 (30%), Positives = 100/230 (43%), Gaps = 49/230 (21%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN---IVKF 752
IGRG +G+V K PSG +AVK++ S E QK L ++ + +R + IVKF
Sbjct: 12 IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKE-QKRLLMDLDVV--MRSSDCPYIVKF 68
Query: 753 YG---------FC------SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG 797
YG C S + VYE L+ IL V +K
Sbjct: 69 YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIA---------VATVK- 118
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG 857
AL+Y+ E + I+HRDV N+LLD + DFG + L DS + AG
Sbjct: 119 ---ALNYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQLV-DSIAKTRDAGCRP 172
Query: 858 YVAPEL-------AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD 900
Y+APE Y + + DV+S G+ EV G+ P +S+ D
Sbjct: 173 YMAPERIDPSARDGYDV----RSDVWSLGITLYEVATGKFPYPKWNSVFD 218
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 2e-13
Identities = 76/335 (22%), Positives = 122/335 (36%), Gaps = 87/335 (25%)
Query: 697 IGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGET-THQKEFLSEIKALTGV-RHRN 748
+GRG +G V +A S TVAVK L G T + K ++E+K L + H N
Sbjct: 15 LGRGAFGKVIQASAFGIEKSASCRTVAVKMLKE--GATASEYKALMTELKILIHIGHHLN 72
Query: 749 IVKFYG--------------FCSHA---------RHSFLVYE------------YLERGS 773
+V G +C R F Y ++
Sbjct: 73 VVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQR 132
Query: 774 LARILSSETATEMDWS--KRVNVIKG-------------VAHALSY-------MHHECRP 811
L + SS+++ + K ++ ++ + +SY M
Sbjct: 133 LDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASR 192
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL--KPDSSNWSELAGTYGYVAPELAYTMKV 869
+HRD++++N+LL + DFG A+ + PD + ++APE +
Sbjct: 193 KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVY 252
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--ARLPPPWLEV 927
T + DV+SFGVL E+ SL S PG ++E R+ P
Sbjct: 253 TTQSDVWSFGVLLWEIF----------SLGASPYPGVQIDEEFCRRLKEGTRMRAP---- 298
Query: 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
E I + L C NPE RP + ++L
Sbjct: 299 --EYATPEIYSIMLDCWHNNPEDRPTFSELVEILG 331
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 2e-13
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 697 IGRGGYGSVY-----KAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G V A +G+ VAVK L G+ + + EI L + H NIVK
Sbjct: 12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQ-NTSGWKKEINILKTLYHENIVK 70
Query: 752 FYGFCSHA--RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ G CS + L+ EY+ GSL L ++ ++ + + + ++Y+H +
Sbjct: 71 YKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK---LNLAQLLLFAQQICEGMAYLHSQ- 126
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA----GTYGYVAPELAY 865
+HRD++++NVLLD + + DFG AK + P+ + + + A E
Sbjct: 127 --HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAVECLK 183
Query: 866 TMKVTEKCDVYSFGVLALEVI 886
K + DV+SFGV E++
Sbjct: 184 ENKFSYASDVWSFGVTLYELL 204
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 3e-13
Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 50/280 (17%)
Query: 697 IGRGGYGSVYKAELPSGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G +GSV + +L D VAVK + + +EFLSE + H N++K
Sbjct: 7 LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66
Query: 753 YGFC--SHARHSF----LVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYM 805
G C + + ++ +++ G L + +L S + ++K + M
Sbjct: 67 IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY--------- 856
+ +HRD++++N +L + V+DFG +K + +G Y
Sbjct: 127 EYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKI---------YSGDYYRQGRIAKM 177
Query: 857 --GYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAID 913
++A E T K DV++FGV E+ +GQ P PG +E D
Sbjct: 178 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTP-----------YPGVENHEIYD 226
Query: 914 HMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
++ RL P ED L + ++ SC A+P+ RP
Sbjct: 227 YLRHGNRLKQP------EDCLDELYDLMYSCWRADPKDRP 260
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 3e-13
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 8/200 (4%)
Query: 690 NFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN 748
NF + IG G YG VYKA +G+ VA+KK+ T + EI L + H N
Sbjct: 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH-H 807
IVK +LV+E+L + L + + + + + + + + L++ H H
Sbjct: 61 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH 119
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
++HRD+ +N+L++ E ++DFG A+ ++ T Y APE+
Sbjct: 120 R----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 175
Query: 868 KV-TEKCDVYSFGVLALEVI 886
K + D++S G + E++
Sbjct: 176 KYYSTAVDIWSLGCIFAEMV 195
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 4e-13
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 28/261 (10%)
Query: 697 IGRGGYGS--VY-KAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
+G+G +G +Y + E V K+++ +++ L+EI L+ ++H NI+ +Y
Sbjct: 8 LGKGAFGEATLYRRTE--DDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYY 65
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
+ EY G+L + + + + + + A+SY+H I
Sbjct: 66 NHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GI 122
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC 873
+HRD+ + N+ L + DFG +K+L + S + GT Y++PEL +K K
Sbjct: 123 LHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKS 182
Query: 874 DVYSFGVLALEV--IKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931
D+++ G + E+ +K +L + G V
Sbjct: 183 DIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY------------------TPVVSV 224
Query: 932 KLKSIIEVALSCVDANPERRP 952
+I + S + +PE+RP
Sbjct: 225 YSSELISLVHSLLQQDPEKRP 245
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 4e-13
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 49/244 (20%)
Query: 697 IGRGGYGSVYKAELPSGD--------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHR 747
+G G +G V AE D TVAVK L E + +SE++ + + +H+
Sbjct: 23 LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHK 81
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG---------- 797
NI+ G C+ +++ EY +G+L L + M++S + +
Sbjct: 82 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVS 141
Query: 798 ----VAHALSYM-HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852
VA + Y+ +C +HRD++++NVL+ ++DFG A+ D +N
Sbjct: 142 CTYQVARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DVNNIDYY 193
Query: 853 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGA 906
T ++APE + T + DV+SFGVL E+ +L S PG
Sbjct: 194 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF----------TLGGSPYPGI 243
Query: 907 NMNE 910
+ E
Sbjct: 244 PVEE 247
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 4e-13
Identities = 74/272 (27%), Positives = 111/272 (40%), Gaps = 34/272 (12%)
Query: 697 IGRGGYGSVYK-AELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYG 754
IG+G YG VYK G AVK L + +E +E L + H N+VKFYG
Sbjct: 30 IGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYG 86
Query: 755 FCSHARHS-----FLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHH 807
A +LV E GS+ ++ +D + ++ G L ++H+
Sbjct: 87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN 146
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL---- 863
I+HRDV N+LL E + DFG + L + GT ++APE+
Sbjct: 147 N---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACE 203
Query: 864 -AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922
Y +CDV+S G+ A+E L D P +M+ R PP
Sbjct: 204 QQYDYSYDARCDVWSLGITAIE-------------LGDGDPPLFDMHPVKTLFKIPRNPP 250
Query: 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNM 954
P L + E +S C+ + E RP++
Sbjct: 251 PTL-LHPEKWCRSFNHFISQCLIKDFEARPSV 281
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 5e-13
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 35/214 (16%)
Query: 697 IGRGGYGSVYKAELPSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKF 752
IG G +G V KA + A+K++ + + H ++F E++ L + H NI+
Sbjct: 15 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGHHPNIINL 73
Query: 753 YGFCSHARHSFLVYEYLERGSL------ARILSSE--------TATEMDWSKRVNVIKGV 798
G C H + +L EY G+L +R+L ++ TA+ + + ++ V
Sbjct: 74 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 133
Query: 799 AHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG- 857
A + Y+ + +HRD++++N+L+ Y A ++DFG ++ + T G
Sbjct: 134 ARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMGR 184
Query: 858 ----YVAPE-LAYTMKVTEKCDVYSFGVLALEVI 886
++A E L Y++ T DV+S+GVL E++
Sbjct: 185 LPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 217
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 70.1 bits (171), Expect = 5e-13
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLS----EIKALTGVRHRNIVK 751
+G+G +G VY ++ +G +A K++ F E+ + +S EI+ L ++H IV+
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAAKQVQ-FDPESPETSKEVSALECEIQLLKNLQHERIVQ 68
Query: 752 FYG-FCSHARHSFLVY-EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+YG A + ++ EY+ GS+ L + A +++ + + +SY+H
Sbjct: 69 YYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYT--RQILEGMSYLHSNM 126
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP---DSSNWSELAGTYGYVAPELAYT 866
IVHRD+ N+L D + DFG +K L+ + + GT +++PE+
Sbjct: 127 ---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISG 183
Query: 867 MKVTEKCDVYSFGVLALEVIKGQHP 891
K DV+S G +E++ + P
Sbjct: 184 EGYGRKADVWSLGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 7e-13
Identities = 38/93 (40%), Positives = 49/93 (52%)
Query: 160 LALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPI 219
L LD L G IP I L L + L NS+ G+IP S+G++++L L L N G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 220 PSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKL 252
P S G L L L L+ N LSG +P +G L
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRLL 515
|
Length = 623 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 7e-13
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 31/270 (11%)
Query: 697 IGRGGYGSVYKAELPSGDT---VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
+G G +GSV + +L D+ VAVK + + ++FLSE + H N+++
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66
Query: 754 GFC--SHARHSF----LVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMH 806
G C + + ++ +++ G L + +L S + ++K + S M
Sbjct: 67 GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFG-TAKLLKPDSSNWSELAGT-YGYVAPELA 864
+ +HRD++++N +L+ V+DFG + K+ D +A ++A E
Sbjct: 127 YLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESL 186
Query: 865 YTMKVTEKCDVYSFGVLALEV-IKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPP 922
T K DV+SFGV E+ +GQ P PG +E D++ RL
Sbjct: 187 ADRVYTTKSDVWSFGVTMWEIATRGQTP-----------YPGVENSEIYDYLRQGNRLKQ 235
Query: 923 PWLEVGVEDKLKSIIEVALSCVDANPERRP 952
P D L + + SC NP+ RP
Sbjct: 236 P------PDCLDGLYSLMSSCWLLNPKDRP 259
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 9e-13
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 232 LELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHI 291
L L N L G IP +I L+ L ++LS N +RG +P SL +++SLE+L L N +G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 292 PQEIGNFMNLNSLSVGGNQFTGFLP 316
P+ +G +L L++ GN +G +P
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 1e-12
Identities = 44/127 (34%), Positives = 58/127 (45%), Gaps = 23/127 (18%)
Query: 483 IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLE 542
IP ++ L L +N+S N IP LG + L LDLS+N G IP + L SL
Sbjct: 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLR 493
Query: 543 KLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGE 602
LNL+ N+LSG +P + G L S+N D N GLCG
Sbjct: 494 ILNLNGNSLSGRVPA---ALGGRLLHRASFNFTD-------------------NAGLCG- 530
Query: 603 VSGLQPC 609
+ GL+ C
Sbjct: 531 IPGLRAC 537
|
Length = 623 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 1e-12
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 144 LNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNL 202
L G IP +I L L+++ L GN + G IP S+G+++SL L L NS GSIP S+G L
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 203 SNLVYLFLKKNHLRGPIPSSFG 224
++L L L N L G +P++ G
Sbjct: 490 TSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 1e-12
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKE-FLSEIKALTGVRHRN 748
+++ +GRG +G V+ + + + K T ++ +E + L + H N
Sbjct: 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN 60
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
I+++Y + +V EY G+LA + + +D ++ + AL ++H +
Sbjct: 61 IIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120
Query: 809 CRPPIVHRDVSSKNVLLD-FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
I+HRD+ ++N+LLD + + DFG +K+L S ++ + GT Y++PEL
Sbjct: 121 L---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT-VVGTPCYISPELCEGK 176
Query: 868 KVTEKCDVYSFGVLALEV 885
+K D+++ G + E+
Sbjct: 177 PYNQKSDIWALGCVLYEL 194
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 1e-12
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 16/194 (8%)
Query: 716 VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLA 775
VAVK L + +T + +FL EIK ++ +++ NI++ G C ++ EY+E G L
Sbjct: 47 VAVKMLRADVTKTA-RNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLN 105
Query: 776 RILSSET-------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE 828
+ LS A + N++ S M + VHRD++++N L+
Sbjct: 106 QFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH 165
Query: 829 YEAHVSDFGTAKLLKPDSSNWSELAG----TYGYVAPELAYTMKVTEKCDVYSFGVLALE 884
Y ++DFG ++ L S ++ + G ++A E K T DV++FGV E
Sbjct: 166 YTIKIADFGMSRNLY--SGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWE 223
Query: 885 VIK--GQHPKDLLS 896
+ + P LLS
Sbjct: 224 MFTLCKEQPYSLLS 237
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 69.6 bits (170), Expect = 1e-12
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 8/198 (4%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKE-FLSEIKALT-GVRHRNIVKFY 753
+G+G +G V+ AEL + A+K L E + E + L+ H + Y
Sbjct: 3 LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLY 62
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
+ F V EYL G L + ++ + D + + L ++H + I
Sbjct: 63 CTFQTKENLFFVMEYLNGGDL--MFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GI 117
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC 873
V+RD+ N+LLD + ++DFG K + GT Y+APE+ K
Sbjct: 118 VYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSV 177
Query: 874 DVYSFGVLALEVIKGQHP 891
D +SFGVL E++ GQ P
Sbjct: 178 DWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 1e-12
Identities = 76/281 (27%), Positives = 118/281 (41%), Gaps = 50/281 (17%)
Query: 697 IGRGGYGSVY----KAELPSGD---TVAVKKLHSFTGET-THQKEFLSEIKALTGVRHRN 748
+G G +G VY L G VAVK L G T +KEFL E ++ H N
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRK--GATDQEKKEFLKEAHLMSNFNHPN 60
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSL------ARILSSETATEMDWSKRVNVIKGVAHAL 802
IVK G C +++ E +E G L AR+ + + +++ VA
Sbjct: 61 IVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPL-LTLKELLDICLDVAKGC 119
Query: 803 SYMHHECRPPIVHRDVSSKNVLL-----DFEYEAHVSDFGTAKLLKPDSSNWSELAG--- 854
Y+ + +HRD++++N L+ D + + DFG A+ + S++ G
Sbjct: 120 VYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIY--KSDYYRKEGEGL 174
Query: 855 -TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAI 912
++APE K T + DV+SFGVL E++ GQ P P N E +
Sbjct: 175 LPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP-----------YPALNNQEVL 223
Query: 913 DHM-FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
H+ RL P DK+ ++ +C +P RP
Sbjct: 224 QHVTAGGRLQKP---ENCPDKIYQLM---TNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 2e-12
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 385 GELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTS 444
G + ++ L + ++GN+I G IPP +G+ T L LD S N G +P L LTS
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 445 LNDLILNGNQLSGGIPPELG 464
L L LNGN LSG +P LG
Sbjct: 492 LRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 2e-12
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 52/276 (18%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKE---FLSEIKALTGVRHRNIVKFY 753
+G G +G VYKA+ +A K+ ET ++E ++ EI+ L H IVK
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVI----ETKSEEELEDYMVEIEILATCNHPYIVKLL 75
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMD---WSKRVNVI-KGVAHALSYMHHEC 809
G +++ E+ G++ I+ E+D ++ VI + + AL Y+H
Sbjct: 76 GAFYWDGKLWIMIEFCPGGAVDAIM-----LELDRGLTEPQIQVICRQMLEALQYLHSM- 129
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFG-TAKLLKPDSSNWSELAGTYGYVAPELAY--T 866
I+HRD+ + NVLL + + ++DFG +AK +K S GT ++APE+ T
Sbjct: 130 --KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDS-FIGTPYWMAPEVVMCET 186
Query: 867 MKVTE---KCDVYSFGVLALEV--IKGQH----PKDLLSSLSDSSLPGANMNEAIDHMFD 917
MK T K D++S G+ +E+ I+ H P +L ++ S P +
Sbjct: 187 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQ--------- 237
Query: 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN 953
P W + D LK + +D +PE RP+
Sbjct: 238 ---PSKW-SMEFRDFLK-------TALDKHPETRPS 262
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 2e-12
Identities = 63/294 (21%), Positives = 120/294 (40%), Gaps = 58/294 (19%)
Query: 697 IGRGGYGSVYK---AELPSGD---TVAVKKLHSFTGETTHQK-EFLSEIKALTGVRHRNI 749
+G+G +G VY+ + G+ VA+K ++ + ++ EFL+E + ++
Sbjct: 14 LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNE--NASMRERIEFLNEASVMKEFNCHHV 71
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR--------VNVIKGVAHA 801
V+ G S + + +V E + +G L L S + + + +A
Sbjct: 72 VRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADG 131
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL------KPDSS-----NWS 850
++Y+ + VHRD++++N ++ + + DFG + + + W
Sbjct: 132 MAYLAAK---KFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW- 187
Query: 851 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910
+APE T K DV+SFGV+ E +++L++ G + E
Sbjct: 188 --------MAPESLKDGVFTTKSDVWSFGVVLWE----------MATLAEQPYQGLSNEE 229
Query: 911 AIDHMFDAR-LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKLLS 962
+ + D L P DKL +E+ C NP+ RP ++IV L
Sbjct: 230 VLKFVIDGGHLDLP---ENCPDKL---LELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 2e-12
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 25/194 (12%)
Query: 712 SGDTVAVKKLHSFTGETTHQ-KEFLSEIKALTGVRHRNIVKFY--GFCSHARHSFLVYEY 768
+G VA+K L + E HQ F E + H NIV G F V+EY
Sbjct: 2 TGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGL-LFAVFEY 60
Query: 769 LERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL- 825
+ +L +L+++ A + R+ V+ +A A H IVHRD+ +N+++
Sbjct: 61 VPGRTLREVLAADGALPAGETGRLMLQVLDALACA-----H--NQGIVHRDLKPQNIMVS 113
Query: 826 --DFEYEAHVSDFGTAKLLKPDSSNW--------SELAGTYGYVAPELAYTMKVTEKCDV 875
A V DFG LL P + +E+ GT Y APE VT D+
Sbjct: 114 QTGVRPHAKVLDFGIGTLL-PGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDL 172
Query: 876 YSFGVLALEVIKGQ 889
Y++G++ LE + GQ
Sbjct: 173 YAWGLIFLECLTGQ 186
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 2e-12
Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 30/267 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G+VYK +P G+ VA+K L T + KE L E + GV + +
Sbjct: 15 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN-KEILDEAYVMAGVGSPYVCR 73
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G C + LV + + G L + E + +N +A +SY+ E R
Sbjct: 74 LLGICLTSTVQ-LVTQLMPYGCLLDYVR-ENKDRIGSQDLLNWCVQIAKGMSYLE-EVR- 129
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY--GYVAPELAYTMKV 869
+VHRD++++NVL+ ++DFG A+LL D + + G ++A E +
Sbjct: 130 -LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRF 188
Query: 870 TEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928
T + DV+S+GV E++ G P D +P + + ++ RLP P +
Sbjct: 189 THQSDVWSYGVTVWELMTFGAKPYD--------GIPAREIPDLLEK--GERLPQPPICT- 237
Query: 929 VEDKLKSIIEVALSCVDANPERRPNMQ 955
+ + + C + E RP +
Sbjct: 238 -----IDVYMIMVKCWMIDSECRPRFR 259
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 2e-12
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 689 NNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR 747
N F+ +G G YG V K + + VA+KK ++ L E+K L ++
Sbjct: 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE 60
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
NIV+ +LV+EY+E+ L L E + K + I + A+ + H
Sbjct: 61 NIVELKEAFRRRGKLYLVFEYVEKNMLE--LLEEMPNGVPPEKVRSYIYQLIKAIHWCH- 117
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS-SNWSELAGTYGYVAPELAYT 866
+ IVHRD+ +N+L+ + DFG A+ L S +N++E T Y +PEL
Sbjct: 118 --KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLG 175
Query: 867 MKVTEKCDVYSFGVLALEVIKGQ 889
+ D++S G + E+ GQ
Sbjct: 176 APYGKAVDMWSVGCILGELSDGQ 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G YG V K + +G VA+KK + +K + EI+ L +RH N+V
Sbjct: 9 VGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEV 68
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYMHHECRPPI 813
+ +LV+E+++ L + + ++ +++G+ + H I
Sbjct: 69 FRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIE----FCH---SHNI 121
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY-TMKVTEK 872
+HRD+ +N+L+ + DFG A+ L +++ T Y APEL K
Sbjct: 122 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRA 181
Query: 873 CDVYSFGVLALEVIKGQ 889
D+++ G L E++ G+
Sbjct: 182 VDIWAVGCLVTEMLTGE 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 3e-12
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKL-HSFTGETTHQKEFLSEIKALTGVRHRNIVK-- 751
IG G YG V A + SG VA+KK+ H+F T K L E+K L +H NI+
Sbjct: 12 NIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTL-AKRTLRELKILRHFKHDNIIAIR 70
Query: 752 --FYGFCSHARHSFLVYEYLERGSLARIL-SSETATEMDWSKRVN-----VIKGVAHALS 803
+ + ++V + +E L I+ S + TE + + +++G L
Sbjct: 71 DILRPPGADFKDVYVVMDLME-SDLHHIIHSDQPLTE----EHIRYFLYQLLRG----LK 121
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL--KPD--SSNWSELAGTYGYV 859
Y+H ++HRD+ N+L++ + E + DFG A+ L P +E T Y
Sbjct: 122 YIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYR 178
Query: 860 APELAYTM-KVTEKCDVYSFGVLALEVI 886
APEL ++ + T D++S G + E++
Sbjct: 179 APELLLSLPEYTTAIDMWSVGCIFAEML 206
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 4e-12
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLS---EIKALTGVRHRNIVKF 752
+GRG +G VY + +G +AVK++ KE + EI+ L +RH IV++
Sbjct: 10 LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQY 69
Query: 753 YGFC--SHARHSFLVY-EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
YG C ++ EY+ GS+ L + A + ++R + + +SY+H
Sbjct: 70 YG-CLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYT--RQILQGVSYLHSNM 126
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP---DSSNWSELAGTYGYVAPELAYT 866
IVHRD+ N+L D + DFG +K ++ + + GT +++PE+
Sbjct: 127 ---IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISG 183
Query: 867 MKVTEKCDVYSFGVLALEVIKGQHP 891
K DV+S +E++ + P
Sbjct: 184 EGYGRKADVWSVACTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 67.2 bits (165), Expect = 5e-12
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVK----KLHSFTGETTHQKEFLSEIKALTGV-RHRNI 749
+G G +GSVY A +G+ VA+K K +S+ E + L E+K+L + H NI
Sbjct: 6 QLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW-EECMN----LREVKSLRKLNEHPNI 60
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
VK + V+EY+E G+L +++ S ++I + L+++H
Sbjct: 61 VKLKEVFRENDELYFVFEYME-GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH--- 116
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL-----A 864
+ HRD+ +N+L+ ++DFG A+ ++ +++ T Y APE+ +
Sbjct: 117 KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIR-SRPPYTDYVSTRWYRAPEILLRSTS 175
Query: 865 YTMKVTEKCDVYSFGVLALEV 885
Y+ V D+++ G + E+
Sbjct: 176 YSSPV----DIWALGCIMAEL 192
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 67.0 bits (163), Expect = 6e-12
Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 18/273 (6%)
Query: 688 INNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSF-TGETTHQKEFLSEIKALTGVR 745
+ NF IGRG + VY+A L VA+KK+ F + +++ + EI L +
Sbjct: 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN 60
Query: 746 HRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYM 805
H N++K+ +V E + G L++++ + +R V K S +
Sbjct: 61 HPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPER-TVWKYFVQLCSAV 119
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY 865
H ++HRD+ NV + + D G + ++ L GT Y++PE +
Sbjct: 120 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 179
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE-AIDHMFDARLPPPW 924
K D++S G L E+ Q P G MN ++ + PP
Sbjct: 180 ENGYNFKSDIWSLGCLLYEMAALQSP-----------FYGDKMNLFSLCQKIEQCDYPPL 228
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIV 957
+KL+ ++ + C+ +P++RP++ V
Sbjct: 229 PTEHYSEKLRELVSM---CIYPDPDQRPDIGYV 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 6e-12
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 42/287 (14%)
Query: 697 IGRGGYGSVYKAELPSGDT---VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
IG G +G V E+ SG T V VK+L Q +FL E + ++H N+++
Sbjct: 3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCL 61
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEM---DWSKRVNVIKGVAHALSYMHHECR 810
G C+ LV E+ G L L S E+ D + + +A L ++H +
Sbjct: 62 GQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---K 118
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL-------LKPDSSNWSELAGTYGYVAPEL 863
+H D++ +N LL + + D+G + + PD W L ++APEL
Sbjct: 119 NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQL-WVPLR----WIAPEL 173
Query: 864 A-------YTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHM 915
+ T++ +V+S GV E+ + G P LSD + + E
Sbjct: 174 VDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQP---YRHLSDEQVLTYTVREQ---- 226
Query: 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+LP P L++ + D+ EV C PE+RP+ + V LLS
Sbjct: 227 -QLKLPKPRLKLPLSDRW---YEVMQFC-WLQPEQRPSAEEVHLLLS 268
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 8e-12
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 697 IGRGGYGSVYKAELPSGDTV-AVKKLH---SFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G +G + + D A+K++ S + +KE + L ++H NIV F
Sbjct: 8 VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAV----LLAKMKHPNIVAF 63
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETA------TEMDWSKRVNVIKGVAHALSYMH 806
H ++V EY + G L + + + T + W V + GV H
Sbjct: 64 KESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWF--VQMCLGVQHI----- 116
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT 866
HE R ++HRD+ SKN+ L + + DFG+A+LL + GT YV PE+
Sbjct: 117 HEKR--VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWEN 174
Query: 867 MKVTEKCDVYSFGVLALEVIKGQHP 891
M K D++S G + E+ +HP
Sbjct: 175 MPYNNKSDIWSLGCILYELCTLKHP 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 8e-12
Identities = 69/280 (24%), Positives = 109/280 (38%), Gaps = 41/280 (14%)
Query: 697 IGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G VY+ VAVK L E + +FL E ++ H+NIV
Sbjct: 14 LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQD-ESDFLMEALIMSKFNHQNIV 72
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARIL-----SSETATEMDWSKRVNVIKGVAHALSYM 805
+ G F++ E + G L L E + + + + VA Y+
Sbjct: 73 RLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYE---AHVSDFGTAKLLKPDSSNWSELAGT----YGY 858
E +HRD++++N LL + A ++DFG A+ + +++ G +
Sbjct: 133 -EENH--FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY--RASYYRKGGRAMLPIKW 187
Query: 859 VAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD- 917
+ PE T K DV+SFGVL E+ SL PG E ++ +
Sbjct: 188 MPPEAFLDGIFTSKTDVWSFGVLLWEIF----------SLGYMPYPGRTNQEVMEFVTGG 237
Query: 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIV 957
RL PP G + + C PE RPN +
Sbjct: 238 GRLDPPK---GCPG---PVYRIMTDCWQHTPEDRPNFATI 271
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 9e-12
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEI---KALTGVRHRNIVKF 752
IG G YG+VYKA + SG VA+K + T E + E+ K L H NIV+
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRL 67
Query: 753 YGFCSHARHS-----FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
C+ +R LV+E++++ L L + ++++ L ++H
Sbjct: 68 MDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA 126
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
C IVHRD+ +N+L+ + ++DFG A++ + + + T Y APE+
Sbjct: 127 NC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA-LTPVVVTLWYRAPEVLLQS 182
Query: 868 KVTEKCDVYSFGVLALEVIK 887
D++S G + E+ +
Sbjct: 183 TYATPVDMWSVGCIFAEMFR 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 1e-11
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 424 LDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSI 483
L + L G +P +++ L L + L+GN + G IPP LG +T L LDLS N F+ SI
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 484 PGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512
P ++G L L LN++ N S +P LG
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 1e-11
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 697 IGRGGYGSVYKAELPSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKF 752
IG G +G V +A + A+K L F E H ++F E++ L + H NI+
Sbjct: 10 IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDH-RDFAGELEVLCKLGHHPNIINL 68
Query: 753 YGFCSHARHSFLVYEYLERGSL------ARILSSETA------TEMDWSKRVNVIKGVAH 800
G C + + ++ EY G+L +R+L ++ A T + + +++ +
Sbjct: 69 LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQ-QLLQFASD 127
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG--- 857
+ M + +HRD++++NVL+ + ++DFG ++ + T G
Sbjct: 128 VATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSR------GEEVYVKKTMGRLP 181
Query: 858 --YVAPE-LAYTMKVTEKCDVYSFGVLALEVI 886
++A E L Y++ T K DV+SFGVL E++
Sbjct: 182 VRWMAIESLNYSVYTT-KSDVWSFGVLLWEIV 212
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 1e-11
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 28/238 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF-YG 754
IG+G YG V A + +G+ VA+KK++ + L EIK L +RH +IV+ +
Sbjct: 8 IGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHI 67
Query: 755 FCSHARHSF----LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+R F +V+E +E I +++ T + + AL Y+H
Sbjct: 68 MLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQF---FLYQLLRALKYIH---T 121
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN---WSELAGTYGYVAPEL--AY 865
+ HRD+ KN+L + + + + DFG A++ D+ W++ T Y APEL ++
Sbjct: 122 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF 181
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
K T D++S G + EV+ G K L PG N+ +D + D P
Sbjct: 182 FSKYTPAIDIWSIGCIFAEVLTG---KPL--------FPGKNVVHQLDLITDLLGTPS 228
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 1e-11
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 26/200 (13%)
Query: 755 FCSHA--RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
FC+ H F V EYL G L + +++ D ++ + L ++H +
Sbjct: 62 FCTFQTKEHLFFVMEYLNGGDL--MFHIQSSGRFDEARARFYAAEIICGLQFLHKK---G 116
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEK 872
I++RD+ NVLLD + ++DFG K S GT Y+APE+ K E
Sbjct: 117 IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNES 176
Query: 873 CDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVED 931
D +SFGVL E++ GQ P E D +FD+ P +
Sbjct: 177 VDWWSFGVLLYEMLIGQSPFH---------------GEDEDELFDSILNDRPHFPRWISK 221
Query: 932 KLKSIIEVALSCVDANPERR 951
+ K + + +P +R
Sbjct: 222 EAKDCLSKLF---ERDPTKR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 1e-11
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLH--SFTGETTHQKEFLS-EIKALTGVRHRNIVKF 752
+G+G +G VY + +G +AVK++ + ET+ + L EI+ L + H IV++
Sbjct: 10 LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69
Query: 753 YGFCSHARHSFL--VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
YG L E++ GS+ L S A + +++ + + +SY+H
Sbjct: 70 YGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYT--RQILEGVSYLHSNM- 126
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP---DSSNWSELAGTYGYVAPELAYTM 867
IVHRD+ N+L D + DFG +K L+ + + GT +++PE+
Sbjct: 127 --IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGE 184
Query: 868 KVTEKCDVYSFGVLALEVIKGQHP 891
K D++S G +E++ + P
Sbjct: 185 GYGRKADIWSVGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 2e-11
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY-- 753
IG G YG V A P+G VA+KK+ F +T Q+ L EIK L +H NI+
Sbjct: 13 IGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRT-LREIKILRRFKHENIIGILDI 71
Query: 754 ----GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
F S ++V E +E L +++ ++ + D + + + L Y+H
Sbjct: 72 IRPPSFESF-NDVYIVQELMET-DLYKLIKTQHLSN-DHIQY--FLYQILRGLKYIH--- 123
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS---ELAGTYGYVAPELAYT 866
++HRD+ N+LL+ + + DFG A++ P+ + E T Y APE+
Sbjct: 124 SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLN 183
Query: 867 MK-VTEKCDVYSFGVLALEVIKG 888
K T+ D++S G + E++
Sbjct: 184 SKGYTKAIDIWSVGCILAEMLSN 206
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 2e-11
Identities = 72/290 (24%), Positives = 120/290 (41%), Gaps = 56/290 (19%)
Query: 697 IGRGGYGSVYKAELPSGD--------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHR 747
+G G +G V AE D TVAVK L + +SE++ + + +H+
Sbjct: 20 LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKD-DATDKDLSDLVSEMEMMKMIGKHK 78
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWS--------------KRVN 793
NI+ G C+ +++ EY +G+L L + MD+S V+
Sbjct: 79 NIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVS 138
Query: 794 VIKGVAHALSYM-HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852
VA + Y+ +C +HRD++++NVL+ + ++DFG A+ D N
Sbjct: 139 CAYQVARGMEYLASQKC----IHRDLAARNVLVTEDNVMKIADFGLAR----DVHNIDYY 190
Query: 853 AGTYG------YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGA 906
T ++APE + T + DV+SFGVL E+ +L S PG
Sbjct: 191 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIF----------TLGGSPYPGI 240
Query: 907 NMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ E + + R+ P +L I+ C A P +RP +
Sbjct: 241 PVEELFKLLKEGHRMDKP---ANCTHELYMIMR---ECWHAVPSQRPTFK 284
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 31/197 (15%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-----FLSEIK 739
R ++ FD IG G YG VYKA + +G+ VA+KK+ ++KE + EIK
Sbjct: 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKV-----RLDNEKEGFPITAIREIK 58
Query: 740 ALTGVRHRNIVKFY----------GFCSHARHSFLVYEYLERGSLARILSSETATEMDWS 789
L + HRNIV F +LV+EY++ L +L S + +S
Sbjct: 59 ILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGL---VHFS 114
Query: 790 KR--VNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847
+ + +K + L+Y H + +HRD+ N+LL+ + + ++DFG A+L + S
Sbjct: 115 EDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES 171
Query: 848 N-WSELAGTYGYVAPEL 863
++ T Y PEL
Sbjct: 172 RPYTNKVITLWYRPPEL 188
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 3e-11
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 25/211 (11%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIK-ALTGVRHRNIVKFYG 754
+GRG YG V K +P+G +AVK++ + T + QK L ++ ++ V V FYG
Sbjct: 9 LGRGAYGVVDKMRHVPTGTIMAVKRIRA-TVNSQEQKRLLMDLDISMRSVDCPYTVTFYG 67
Query: 755 FCSHARHSFLVYEYLERGSL----ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
++ E ++ SL ++ D ++ V + AL Y+H +
Sbjct: 68 ALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAV--SIVKALEYLHSKLS 124
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL------- 863
++HRDV NVL++ + + DFG + L DS + AG Y+APE
Sbjct: 125 --VIHRDVKPSNVLINRNGQVKLCDFGISGYLV-DSVAKTIDAGCKPYMAPERINPELNQ 181
Query: 864 -AYTMKVTEKCDVYSFGVLALEVIKGQHPKD 893
Y + K DV+S G+ +E+ G+ P D
Sbjct: 182 KGYDV----KSDVWSLGITMIELATGRFPYD 208
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 3e-11
Identities = 66/219 (30%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 689 NNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKL-HSFTGETTHQKEFLSEIKALTGVRH 746
+FD +GRG +G V E +GD A+K + S F E L+
Sbjct: 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS 60
Query: 747 RNIVKF-YGFCSHARHSFLVYEYLERGSLARILS------SETATEMDWSKRVNVIKGVA 799
I + Y F + +LV EY G L +L+ E + ++ V I V
Sbjct: 61 PWIPQLQYAF-QDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSV- 118
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL-AGTYGY 858
H + Y VHRD+ +NVL+D ++DFG+A L + S+L GT Y
Sbjct: 119 HQMGY---------VHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDY 169
Query: 859 VAPELAYTMKVTEK------CDVYSFGVLALEVIKGQHP 891
+APE+ TM K CD +S GV+A E+I G+ P
Sbjct: 170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP 208
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 4e-11
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG VYKA + + +T+A+KK+ + + EI L ++H NIV+
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG----VAHALSYMHHECRP 811
+ +LV+EYL+ L + D++K +IK + ++Y H
Sbjct: 70 VHSEKRLYLVFEYLDLD-----LKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH--- 121
Query: 812 PIVHRDVSSKNVLLDFEYEA-HVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL-----AY 865
++HRD+ +N+L+D A ++DFG A+ ++ T Y APE+ Y
Sbjct: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHY 181
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHP 891
+ V D++S G + E++ Q P
Sbjct: 182 STPV----DIWSVGCIFAEMVN-QKP 202
|
Length = 294 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 4e-11
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 20/225 (8%)
Query: 681 YEEIIRSI-------NNFDESFCIGRGGYGSVYKAELPSGDTV-AVKKLHSFTGETTHQK 732
YE+I+R I ++D IGRG +G V S V A+K L F
Sbjct: 28 YEKIVRKIRKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDS 87
Query: 733 EFLSEIKALTGVRHRN-IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR 791
F E + + + +V+ + ++ ++V EY+ G L ++S+ E W+K
Sbjct: 88 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE-KWAKF 146
Query: 792 VNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA-KLLKPDSSNWS 850
V AL +H ++HRDV N+LLD ++DFGT K+ +
Sbjct: 147 YTA--EVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCD 201
Query: 851 ELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGQHP 891
GT Y++PE+ + +CD +S GV E++ G P
Sbjct: 202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 5e-11
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 697 IGRGGYGSVY---KAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G+G +G V+ K P +G A+K L T + + E L V H IVK
Sbjct: 4 LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKL 63
Query: 753 -YGFCSHARHSFLVYEYLERGSLARILSSETA-TEMDWSKRVNV-IKGVAHALSYMHHEC 809
Y F + + +L+ ++L G L LS E TE D V + +A AL ++H
Sbjct: 64 HYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEED----VKFYLAELALALDHLH--- 115
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
I++RD+ +N+LLD E ++DFG +K GT Y+APE+
Sbjct: 116 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 175
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
T+ D +SFGVL E++ G P G + E + + A+L P
Sbjct: 176 TQSADWWSFGVLMFEMLTGSLP-----------FQGKDRKETMTMILKAKLGMP 218
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 6e-11
Identities = 96/343 (27%), Positives = 142/343 (41%), Gaps = 39/343 (11%)
Query: 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQE 294
++ +P + L L LS S +L NL L L L N+L +I E
Sbjct: 54 LSSNTLLLLPSSLSRLLSLDLLSPSGIS-SLDGSENLLNLLPLPSLDLNLNRLRSNIS-E 111
Query: 295 IGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRL 354
+ NL SL + N T P +L+ + DN I SLP LRN +L+ + L
Sbjct: 112 LLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNK-IESLPSPLRNLPNLKNLDL 170
Query: 355 EKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPE 414
N L ++ NL DLS NK +PPE
Sbjct: 171 SFNDLS-DLPKLLSNLSNLNNLDLSGNKI-------------------------SDLPPE 204
Query: 415 IGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDL 474
I + L ELD S+N ++ ++ L+NL +L+ L L+ N+L +P +G L++L LDL
Sbjct: 205 IELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDL 262
Query: 475 SANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQ-LGKLVQLSELDLSHNLLRGEIPP 533
S N+ S G L L L++S N S +P+ L L+ L+L L E+
Sbjct: 263 SNNQISSISSL--GSLTNLRELDLSGNSLSNALPLIALLLLLLELLLNLLLTLKALEL-- 318
Query: 534 EICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576
L S+ N +N S P + L ++ N LD
Sbjct: 319 ---KLNSILLNNNILSNGETSSPEALSILESLNNLWTLDNALD 358
|
Length = 394 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 7e-11
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 697 IGRGGYGSVYKAELPSGDT--------VAVKKLHSFTGETTHQKEFLSEIKALTGV-RHR 747
+G G +G V AE D VAVK L S E + +SE++ + + +H+
Sbjct: 26 LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKD-LSDLISEMEMMKMIGKHK 84
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR--------------VN 793
NI+ G C+ +++ EY +G+L L + M++ V+
Sbjct: 85 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVS 144
Query: 794 VIKGVAHALSYM-HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852
VA + Y+ +C +HRD++++NVL+ + ++DFG A+ +
Sbjct: 145 CAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 200
Query: 853 AGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910
G ++APE + T + DV+SFGVL E+ +L S PG + E
Sbjct: 201 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF----------TLGGSPYPGVPVEE 250
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 8e-11
Identities = 56/202 (27%), Positives = 83/202 (41%), Gaps = 16/202 (7%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHS-----FTGETTHQKEFLSEIKALTGVRHRNIV 750
+G+GG+G V ++ +G A KKL GE L+E K L V R IV
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMA----LNEKKILEKVSSRFIV 56
Query: 751 KF-YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
Y F + LV + G L + + ++ + + L ++H
Sbjct: 57 SLAYAFETKD-DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR- 114
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
IV+RD+ +NVLLD +SD G A L AGT GY+APE+
Sbjct: 115 --RIVYRDLKPENVLLDDHGNVRISDLGLAVEL-KGGKKIKGRAGTPGYMAPEVLQGEVY 171
Query: 870 TEKCDVYSFGVLALEVIKGQHP 891
D ++ G E+I G+ P
Sbjct: 172 DFSVDWFALGCTLYEMIAGRSP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 63.6 bits (154), Expect = 9e-11
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 697 IGRGGYGSVYKAELPSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKF 752
IG G +G V KA + A+K++ + + H ++F E++ L + H NI+
Sbjct: 3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGHHPNIINL 61
Query: 753 YGFCSHARHSFLVYEYLERGSL------ARILSSETA------TEMDWSKRVNVIKGVAH 800
G C H + +L EY G+L +R+L ++ A T S + ++ A
Sbjct: 62 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ-QLLHFAAD 120
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG--- 857
M + + +HRD++++N+L+ Y A ++DFG ++ + T G
Sbjct: 121 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMGRLP 174
Query: 858 --YVAPE-LAYTMKVTEKCDVYSFGVLALEVI 886
++A E L Y++ T DV+S+GVL E++
Sbjct: 175 VRWMAIESLNYSVYTT-NSDVWSYGVLLWEIV 205
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 9e-11
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 39/219 (17%)
Query: 697 IGRGGYGSVYKAELPSGD--------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHR 747
+G G +G V +AE D TVAVK L + +SE++ + + +H+
Sbjct: 20 LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKD-NATDKDLADLISEMELMKLIGKHK 78
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWS--------------KRVN 793
NI+ G C+ +++ EY +G+L L + D++ V+
Sbjct: 79 NIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVS 138
Query: 794 VIKGVAHALSYMH-HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK------LLKPDS 846
VA + Y+ C +HRD++++NVL+ + ++DFG A+ K S
Sbjct: 139 CAYQVARGMEYLESRRC----IHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 885
+ + ++APE + T + DV+SFG+L E+
Sbjct: 195 NGRLPVK----WMAPEALFDRVYTHQSDVWSFGILMWEI 229
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 1e-10
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 8/198 (4%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G +G V AEL G+ AVK L E K + + N + +
Sbjct: 3 LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY 62
Query: 756 CSH--ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
C+ H F V E+L G L + + D + + L ++H + I
Sbjct: 63 CTFQTKEHLFFVMEFLNGGDL--MFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GI 117
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC 873
++RD+ NV+LD + ++DFG K + S GT Y+APE+ +K T
Sbjct: 118 IYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSV 177
Query: 874 DVYSFGVLALEVIKGQHP 891
D +SFGVL E++ GQ P
Sbjct: 178 DWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 1e-10
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 25/259 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G G G+VYKA L + +AVK + T E QK+ +SE++ L I+ FYG
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVEL--QKQIMSELEILYKCDSPYIIGFYG 66
Query: 755 -FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
F R S + E+++ GSL + + + V V+KG+ + S I
Sbjct: 67 AFFVENRIS-ICTEFMDGGSLD--VYRKIPEHVLGRIAVAVVKGLTYLWSL-------KI 116
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC 873
+HRDV N+L++ + + DFG + L +S GT Y+APE +
Sbjct: 117 LHRDVKPSNMLVNTRGQVKLCDFGVSTQLV--NSIAKTYVGTNAYMAPERISGEQYGIHS 174
Query: 874 DVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKL 933
DV+S G+ +E+ G+ P + S +P + +D PP L VG
Sbjct: 175 DVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE------DPPVLPVGQFS-- 226
Query: 934 KSIIEVALSCVDANPERRP 952
+ + C+ P+ RP
Sbjct: 227 EKFVHFITQCMRKQPKERP 245
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 1e-10
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 32/274 (11%)
Query: 691 FDESFCIGRGGYGSVYKA-ELPSGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVR 745
F + +G G +G+VYK +P G+ VA+K+L T + KE L E + V
Sbjct: 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVD 67
Query: 746 HRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYM 805
+ ++ + G C + L+ + + G L + E + +N +A ++Y+
Sbjct: 68 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 125
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY--GYVAPEL 863
+VHRD++++NVL+ ++DFG AKLL D + G ++A E
Sbjct: 126 EER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALES 182
Query: 864 AYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP- 921
T + DV+S+GV E++ G P D +P + ++ ++ RLP
Sbjct: 183 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD--------GIPASEISSILEK--GERLPQ 232
Query: 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
PP + V + + C + + RP +
Sbjct: 233 PPICTIDV-------YMIMVKCWMIDADSRPKFR 259
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 28/197 (14%)
Query: 685 IRSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-F----LSEI 738
++ +++ IG+G +G V+KA + VA+KK+ ++KE F L EI
Sbjct: 8 CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKV-----LMENEKEGFPITALREI 62
Query: 739 KALTGVRHRNIVKFYGFC-------SHARHSF-LVYEYLERGSLARILSSETATEMDWSK 790
K L ++H N+V C + + SF LV+E+ E LA +LS++ S+
Sbjct: 63 KILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVK-FTLSE 120
Query: 791 RVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL----KPDS 846
V+K + + L Y+H R I+HRD+ + N+L+ + ++DFG A+
Sbjct: 121 IKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKP 177
Query: 847 SNWSELAGTYGYVAPEL 863
+ ++ T Y PEL
Sbjct: 178 NRYTNRVVTLWYRPPEL 194
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 30/214 (14%)
Query: 690 NFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFL-SEIKALTGVRHR 747
+ + +G G +G V+ + S A+K + Q++ + +E + L V H
Sbjct: 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHP 61
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSL------ARILSSET----ATEMDWSKRVNVIKG 797
I++ + R +++ EY+ G L + S+ T A+E
Sbjct: 62 FIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASE------------ 109
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG 857
+ AL Y+H + IV+RD+ +N+LLD E ++DFG AK L+ W+ L GT
Sbjct: 110 IVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLR--DRTWT-LCGTPE 163
Query: 858 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
Y+APE+ + + D ++ G+L E++ G P
Sbjct: 164 YLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-10
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 517 LSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576
+ L L + LRG IP +I L L+ +NLS N++ G+IP + ++ L +D+SYN +
Sbjct: 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFN 479
Query: 577 GPIP-SIEAFRHAPVEALQGNKGLCGEVSG 605
G IP S+ + L GN L G V
Sbjct: 480 GSIPESLGQLTSLRILNLNGNS-LSGRVPA 508
|
Length = 623 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 2e-10
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 21/276 (7%)
Query: 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN 748
++F+ +G G G V K + + +KL + + + + E++ L
Sbjct: 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 64
Query: 749 IVKFYG-FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
IV FYG F S S + E+++ GSL ++L + +V++ V L+Y+
Sbjct: 65 IVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKEAKRIPEEILGKVSI--AVLRGLAYLRE 121
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
+ + I+HRDV N+L++ E + DFG + L +N GT Y++PE
Sbjct: 122 KHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGT 177
Query: 868 KVTEKCDVYSFGVLALEVIKGQHP------KDLLSSLSDSSLPGANMNEAIDHMFDARLP 921
+ + D++S G+ +E+ G++P K+L + P + E H R
Sbjct: 178 HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGR---PVVDGEEGEPHSISPRPR 234
Query: 922 PPWLEV---GVEDK-LKSIIEVALSCVDANPERRPN 953
PP V G++ + +I E+ V+ P + PN
Sbjct: 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPN 270
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 44/248 (17%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-F----LSEIK 739
RS++ +++ I G YG VY+A + +G+ VA+KKL +KE F L EI
Sbjct: 2 RSVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEK-----EKEGFPITSLREIN 56
Query: 740 ALTGVRHRNIV--KFYGFCSHARHSFLVYEYLE---RGSLARI----LSSETATEMDWSK 790
L ++H NIV K S+ ++V EY+E + + + L SE M
Sbjct: 57 ILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLM---- 112
Query: 791 RVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850
+ ++ GVAH +H I+HRD+ + N+LL+ + DFG A+ ++
Sbjct: 113 -LQLLSGVAH----LHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYT 164
Query: 851 ELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN 909
+L T Y APEL + + D++S G + E++ PG +
Sbjct: 165 QLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELL-----------TKKPLFPGKSEI 213
Query: 910 EAIDHMFD 917
+ ++ +F
Sbjct: 214 DQLNKIFK 221
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 2e-10
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 41/249 (16%)
Query: 652 RKKDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELP 711
+KKDS +E R N K+ YE+ NF + +G G +G V A
Sbjct: 11 KKKDSDSTKEPKRKN-----------KMKYEDF-----NFIRT--LGTGSFGRVILATYK 52
Query: 712 SGD--TVAVKKLHSFTGETTHQKEF---LSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766
+ D VA+K+ + QK+ SE K L + H V YG + +LV
Sbjct: 53 NEDFPPVAIKRFEK--SKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVL 110
Query: 767 EYLERGSLARILSSETATEMD----WSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKN 822
E++ G L D ++ ++ +I +L+ IV+RD+ +N
Sbjct: 111 EFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN---------IVYRDLKPEN 161
Query: 823 VLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLA 882
+LLD + ++DFG AK++ D+ ++ L GT Y+APE+ + + D ++ G+
Sbjct: 162 LLLDKDGFIKMTDFGFAKVV--DTRTYT-LCGTPEYIAPEILLNVGHGKAADWWTLGIFI 218
Query: 883 LEVIKGQHP 891
E++ G P
Sbjct: 219 YEILVGCPP 227
|
Length = 340 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 34/207 (16%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKE-----FLSEIKALTGVRHRNIV 750
+G G Y VYKA +G VA+KK+ GE K+ L EIK L ++H NI+
Sbjct: 8 LGEGTYAVVYKARDKETGRIVAIKKI--KLGERKEAKDGINFTALREIKLLQELKHPNII 65
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH---------- 800
H + LV+E++E L +++ K +++ A
Sbjct: 66 GLLDVFGHKSNINLVFEFME-TDLEKVI-----------KDKSIVLTPADIKSYMLMTLR 113
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVA 860
L Y+H I+HRD+ N+L+ + ++DFG A+ + + T Y A
Sbjct: 114 GLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRA 170
Query: 861 PELAY-TMKVTEKCDVYSFGVLALEVI 886
PEL + D++S G + E++
Sbjct: 171 PELLFGARHYGVGVDMWSVGCIFAELL 197
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 2e-10
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 31/253 (12%)
Query: 697 IGRGGYGSVYKAEL----PSGDTVAVKKLHSFT-----GETTHQKEFLSEIKALTGVRHR 747
+G+GGYG V++ +G A+K L T +T H K +E L V+H
Sbjct: 4 LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTK---AERNILEAVKHP 60
Query: 748 NIVKF-YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH 806
IV Y F + + +L+ EYL G L L E D + + ++ AL ++H
Sbjct: 61 FIVDLIYAFQTGGK-LYLILEYLSGGELFMHLEREGIFMEDTACFY--LSEISLALEHLH 117
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT 866
+ I++RD+ +N+LLD + ++DFG K + + GT Y+APE+
Sbjct: 118 QQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMR 174
Query: 867 MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP-PPWL 925
+ D +S G L +++ G P N + ID + +L PP+L
Sbjct: 175 SGHGKAVDWWSLGALMYDMLTGAPP-----------FTAENRKKTIDKILKGKLNLPPYL 223
Query: 926 EVGVEDKLKSIIE 938
D LK +++
Sbjct: 224 TPEARDLLKKLLK 236
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 68/263 (25%), Positives = 106/263 (40%), Gaps = 35/263 (13%)
Query: 697 IGRGGYGSVYKAELPSGDTV-AVKKLHSFTGETTHQKE----FLSE--IKALTGVRHRNI 749
+G+G +G V AEL D + AVK L + Q + ++E + AL G +H +
Sbjct: 3 LGKGSFGKVLLAELKGTDELYAVKVLKK---DVILQDDDVECTMTEKRVLALAG-KHPFL 58
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ + F V EY+ G L + + + D + + L ++H
Sbjct: 59 TQLHSCFQTKDRLFFVMEYVNGGDL--MFHIQRSGRFDEPRARFYAAEIVLGLQFLHER- 115
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
I++RD+ NVLLD E ++DFG K S GT Y+APE+
Sbjct: 116 --GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPY 173
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH-MFDARLPPPWLEVG 928
D ++ GVL E++ GQ P G + +E + D P WL
Sbjct: 174 GPAVDWWALGVLLYEMLAGQSP-----------FEGDDEDELFQSILEDEVRYPRWLSKE 222
Query: 929 VEDKLKSIIEVALSCVDANPERR 951
+ LKS + NPE+R
Sbjct: 223 AKSILKSFLT-------KNPEKR 238
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 3e-10
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 26/228 (11%)
Query: 681 YEEIIRSIN-------NFDESFCIGRGGYGSVYKAELPSGDTV-AVKKLHSFTGETTHQK 732
YE+ I +FD IGRG +G V S V A+K L F
Sbjct: 28 YEKAAEKITKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDS 87
Query: 733 EFLSEIKALTGVRHRN---IVK-FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDW 788
F E + + H N IV+ Y F ++ ++V EY+ G L ++S+ E W
Sbjct: 88 AFFWEERDIMA--HANSEWIVQLHYAF-QDDKYLYMVMEYMPGGDLVNLMSNYDIPE-KW 143
Query: 789 SKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848
++ V AL +H +HRDV N+LLD ++DFGT + +
Sbjct: 144 ARFY--TAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV 198
Query: 849 WSELA-GTYGYVAPELAYTMKVT----EKCDVYSFGVLALEVIKGQHP 891
+ A GT Y++PE+ + +CD +S GV E++ G P
Sbjct: 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 3e-10
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 697 IGRGGYGSVYKAELPSGDTV-AVKKLHSFT----GETTHQKEFLSEIKALTGVRHRNIVK 751
IGRG +G V ++ + V A+K L+ + ET F E L R I
Sbjct: 9 IGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETAC---FREERDVLVNGDRRWITN 65
Query: 752 F-YGFCSHARHSFLVYEYLERGSLARILSS------ETATEMDWSKRVNVIKGVAHALSY 804
Y F + +LV +Y G L +LS E ++ V I V H L Y
Sbjct: 66 LHYAF-QDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSV-HQLGY 123
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA-GTYGYVAPEL 863
VHRD+ NVLLD ++DFG+ L D + S +A GT Y++PE+
Sbjct: 124 ---------VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEI 174
Query: 864 AYTM-----KVTEKCDVYSFGVLALEVIKGQHP 891
M + +CD +S GV E++ G+ P
Sbjct: 175 LQAMEDGKGRYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 3e-10
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 40/278 (14%)
Query: 697 IGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G+G +GSV +A+L S VAVK L + ++ +EFL E + H N++K
Sbjct: 7 LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKL 66
Query: 753 YGFCSHARHS------FLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYM 805
G +R ++ +++ G L +L S E +++ + S M
Sbjct: 67 IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW------SELAGTYGYV 859
+ +HRD++++N +L+ V+DFG +K K S ++ S+L ++
Sbjct: 127 EYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSK--KIYSGDYYRQGCASKLP--VKWL 182
Query: 860 APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918
A E T DV++FGV E++ +GQ P G +E +++
Sbjct: 183 ALESLADNVYTTHSDVWAFGVTMWEIMTRGQTP-----------YAGVENSEIYNYLIKG 231
Query: 919 -RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
RL P D L+ + E+ C P+ RP+ Q
Sbjct: 232 NRLKQP------PDCLEDVYELMCQCWSPEPKCRPSFQ 263
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 3e-10
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 697 IGRGGYGSVYKAELPSGDTV-AVKKLHSFTGETTHQKE---FLSEIKALTGVRHRNIVKF 752
IGRG +G V +L + D V A+K L+ + E + E F E L ++ I
Sbjct: 9 IGRGAFGEVAVVKLKNADKVFAMKILNKW--EMLKRAETACFREERDVLVNGDNQWITTL 66
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSS------ETATEMDWSKRVNVIKGVAHALSYMH 806
+ + +LV +Y G L +LS E ++ V I V H L Y
Sbjct: 67 HYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSV-HQLHY-- 123
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA-GTYGYVAPELAY 865
VHRD+ N+L+D ++DFG+ L D + S +A GT Y++PE+
Sbjct: 124 -------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ 176
Query: 866 TM-----KVTEKCDVYSFGVLALEVIKGQHP 891
M K +CD +S GV E++ G+ P
Sbjct: 177 AMEDGKGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 3e-10
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 31/261 (11%)
Query: 697 IGRGGYGSVYKAELPSGDTV-AVKKLHSFTGETTHQKE----FLSEIKALT-GVRHRNIV 750
+G+G +G V AEL D V A+K L + Q + ++E + L +H +
Sbjct: 3 LGKGSFGKVMLAELKGTDEVYAIKVLKK---DVILQDDDVDCTMTEKRILALAAKHPFLT 59
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+ F V EY+ G L + + + + D + V AL ++H R
Sbjct: 60 ALHCCFQTKDRLFFVMEYVNGGDL--MFQIQRSRKFDEPRSRFYAAEVTLALMFLH---R 114
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT 870
+++RD+ N+LLD E ++DFG K + + GT Y+APE+ ++
Sbjct: 115 HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYG 174
Query: 871 EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE 930
D ++ GVL E++ GQ P + +D+ ++ E+I H D L P WL
Sbjct: 175 PSVDWWALGVLMYEMMAGQPPFE-----ADNE---DDLFESILH--DDVLYPVWLS---- 220
Query: 931 DKLKSIIEVALSCVDANPERR 951
K + + + + NP +R
Sbjct: 221 ---KEAVSILKAFMTKNPNKR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 4e-10
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 25/252 (9%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-----RHRNIVK 751
IGRG Y V L + + K+ E + E + ++ V H +V
Sbjct: 3 IGRGSYAKVLLVRLKKTERIYAMKV--VKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 60
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
+ F V EY+ G L + + + ++ + ++ AL+Y+H
Sbjct: 61 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA--EISLALNYLHER--- 115
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKL-LKPDSSNWSELAGTYGYVAPELAYTMKVT 870
I++RD+ NVLLD E ++D+G K L+P + S GT Y+APE+
Sbjct: 116 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-STFCGTPNYIAPEILRGEDYG 174
Query: 871 EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP-----PPWL 925
D ++ GVL E++ G+ P D++ S S P N D++F L P L
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIVGS---SDNPDQNTE---DYLFQVILEKQIRIPRSL 228
Query: 926 EVGVEDKLKSII 937
V LKS +
Sbjct: 229 SVKAASVLKSFL 240
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 4e-10
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHS----FTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G+G +G V E SG A+K L E H L+E + L RH +
Sbjct: 3 LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHT---LTESRVLKNTRHPFLTS 59
Query: 752 F-YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
Y F + R F V EY+ G L LS E D ++ + AL Y+H
Sbjct: 60 LKYSFQTKDRLCF-VMEYVNGGELFFHLSRERVFSEDRTRFYGA--EIVSALDYLH---S 113
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT 870
IV+RD+ +N++LD + ++DFG K D++ GT Y+APE+
Sbjct: 114 GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYG 173
Query: 871 EKCDVYSFGVLALEVIKGQHP 891
D + GV+ E++ G+ P
Sbjct: 174 RAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 4e-10
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 34/238 (14%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHS-FTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G G YGSV A + +G+ VA+KKL F E ++ + E+ L ++H N++
Sbjct: 23 VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAY-RELTLLKHMQHENVIGLLD 81
Query: 755 -FCS----HARHSF-LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
F S F LV Y+ + L +I+ + + ++ G L Y+H
Sbjct: 82 VFTSAVSGDEFQDFYLVMPYM-QTDLQKIMGHPLSEDKVQYLVYQMLCG----LKYIH-- 134
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG---TYGYVAPELAY 865
I+HRD+ N+ ++ + E + DFG A+ +E+ G T Y APE+
Sbjct: 135 -SAGIIHRDLKPGNLAVNEDCELKILDFGLAR------HADAEMTGYVVTRWYRAPEVIL 187
Query: 866 T-MKVTEKCDVYSFGVLALEVIKGQ---HPKDLLSSLSD----SSLPGANMNEAIDHM 915
M + D++S G + E++ G+ KD L L+ + +PG + ++
Sbjct: 188 NWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDK 245
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 6e-10
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 26/212 (12%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKL---HSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
IG+G YG V+K +G AVK L H E + L KAL+ H N+VKF
Sbjct: 26 IGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNIL---KALSD--HPNVVKF 80
Query: 753 YGF-----CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVN--VIKGVAH-ALSY 804
YG + +LV E GS+ ++ + +R+ +I + H AL
Sbjct: 81 YGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGF----LKRGERMEEPIIAYILHEALMG 136
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL- 863
+ H +HRDV N+LL E + DFG + L + GT ++APE+
Sbjct: 137 LQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVI 196
Query: 864 ----AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+CDV+S G+ A+E+ G P
Sbjct: 197 ACEQQLDSTYDARCDVWSLGITAIELGDGDPP 228
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 6e-10
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG- 754
+G G +G V A + +G VA+KK+ K E+K L +RH NI+
Sbjct: 18 VGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDI 77
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYMHHECRPP 812
F S + V E L L R+L+S E + + +++G L Y+H
Sbjct: 78 FISPLEDIYFVTELLGT-DLHRLLTSR-PLEKQFIQYFLYQILRG----LKYVH---SAG 128
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-MKVTE 871
+VHRD+ N+L++ + + DFG A++ P + + T Y APE+ T K
Sbjct: 129 VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY---VSTRYYRAPEIMLTWQKYDV 185
Query: 872 KCDVYSFGVLALEVIKGQ 889
+ D++S G + E+++G+
Sbjct: 186 EVDIWSAGCIFAEMLEGK 203
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 6e-10
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G VYKA+ +A K+ T ++++ EI L H NIVK
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVID-TKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ + +++ E+ G++ ++ E + + V K AL+Y+H I+HR
Sbjct: 72 YYENNLWILIEFCAGGAVDAVML-ELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHR 127
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE----- 871
D+ + N+L + + ++DFG + GT ++APE+ +
Sbjct: 128 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 187
Query: 872 KCDVYSFGVLALEVIKGQHPKDLLSSL 898
K DV+S G+ +E+ + + P L+ +
Sbjct: 188 KADVWSLGITLIEMAQIEPPHHELNPM 214
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 7e-10
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 45/279 (16%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKE----FLSEIKALTGVR-HRNIV 750
+G+G +G V A L SG AVK L + Q + ++E + L+ R H +
Sbjct: 3 LGKGSFGKVMLARLKESGRLYAVKVLKK---DVILQDDDVECTMTEKRILSLARNHPFLT 59
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+ Y F V E++ G L + + + D ++ + AL ++H +
Sbjct: 60 QLYCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEITSALMFLHDK-- 115
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT 870
I++RD+ NVLLD E ++DFG K + S GT Y+APE+ M
Sbjct: 116 -GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYG 174
Query: 871 EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP-----PPWL 925
D ++ GVL E++ G P + E D +F+A L P WL
Sbjct: 175 PSVDWWAMGVLLYEMLCGHAPFEA---------------ENEDDLFEAILNDEVVYPTWL 219
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964
D LK+ + + P M++ L G+
Sbjct: 220 SQDAVDILKAFM-----------TKNPTMRLGSLTLGGE 247
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 7e-10
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 14/207 (6%)
Query: 689 NNFDESFCIGRGGYGSVYK-AELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR 747
++F++ +G G G V+K + PSG +A K +H + + + + E++ L
Sbjct: 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIH-LEIKPAIRNQIIRELQVLHECNSP 63
Query: 748 NIVKFYG-FCSHARHSFLVYEYLERGSLARIL--SSETATEMDWSKRVNVIKGVAHALSY 804
IV FYG F S S + E+++ GSL ++L + ++ + VIKG L+Y
Sbjct: 64 YIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTY 118
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
+ + + I+HRDV N+L++ E + DFG + L +N GT Y++PE
Sbjct: 119 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 174
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHP 891
+ + D++S G+ +E+ G++P
Sbjct: 175 QGTHYSVQSDIWSMGLSLVEMAIGRYP 201
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 7e-10
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 689 NNFDESFCIGRGGYGSVYKAELPSGDTV-AVKKLHSFTGETTHQKE---FLSEIKALTGV 744
++F+ IGRG +G V ++ + + A+K L+ + E + E F E L
Sbjct: 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKW--EMLKRAETACFREERNVLVNG 58
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSS-ETATEMDWSK-RVNVIKGVAHAL 802
+ I + + +LV +Y G L +LS E D ++ + + H++
Sbjct: 59 DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSI 118
Query: 803 SYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA-GTYGYVAP 861
+H+ VHRD+ NVLLD ++DFG+ + D + S +A GT Y++P
Sbjct: 119 HQLHY------VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISP 172
Query: 862 ELAYTM-----KVTEKCDVYSFGVLALEVIKGQHP 891
E+ M K +CD +S GV E++ G+ P
Sbjct: 173 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 8e-10
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 26/168 (15%)
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPE 862
+HH ++HRD+ S N+LL + DFG +K+ S+ GT YVAPE
Sbjct: 156 VHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPE 215
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922
+ ++K D++S GVL E++ + P D G NM E + R P
Sbjct: 216 IWRRKPYSKKADMFSLGVLLYELLTLKRPFD-----------GENMEEVMHKTLAGRYDP 264
Query: 923 PWLEVGVEDKLKSIIEVALSCVDANPERRP------NMQIVCKL-LSG 963
L + +++ I+ LS ++P+RRP NM I CKL +SG
Sbjct: 265 --LPPSISPEMQEIVTALLS---SDPKRRPSSSKLLNMPI-CKLFISG 306
|
Length = 496 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 8e-10
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQ-KEFLSEIKALTGVRHRNIVK-FY 753
+G+GGYG V+ A+ +G+ VA+K++ ++ + L+E LT + +VK Y
Sbjct: 9 VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLY 68
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
F + +L EY+ G R L + + R + + A+ +H
Sbjct: 69 AF-QDDEYLYLAMEYVPGGDF-RTLLNNLGVLSEDHARFYMAEMFE-AVDALH---ELGY 122
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAK--LLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
+HRD+ +N L+D ++DFG +K + +S + G+ Y+APE+
Sbjct: 123 IHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS-----VVGSPDYMAPEVLRGKGYDF 177
Query: 872 KCDVYSFGVLALEVIKGQHP 891
D +S G + E + G P
Sbjct: 178 TVDYWSLGCMLYEFLCGFPP 197
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 9e-10
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHS----FTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G+G +G V E +G A+K L E H L+E + L RH +
Sbjct: 3 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSRHPFLTA 59
Query: 752 F-YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
Y F +H R F V EY G L LS E D ++ + AL Y+H E
Sbjct: 60 LKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSEDRARFYGA--EIVSALDYLHSE-- 114
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT 870
+V+RD+ +N++LD + ++DFG K D + GT Y+APE+
Sbjct: 115 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYG 174
Query: 871 EKCDVYSFGVLALEVIKGQHP 891
D + GV+ E++ G+ P
Sbjct: 175 RAVDWWGLGVVMYEMMCGRLP 195
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 1e-09
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 409 GGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTD 468
G IP +I L ++ S N + G +P L ++TSL L L+ N +G IP LG LT
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 469 LGYLDLSANRFSKSIPGNMGYLLKLH 494
L L+L+ N S +P +G L LH
Sbjct: 492 LRILNLNGNSLSGRVPAALGGRL-LH 516
|
Length = 623 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 1e-09
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG VYKA + +G+ VA+KK+ T + + EI L + H NIV+
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDV 66
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG----VAHALSYMH-HECR 810
+LV+E+L+ L + + S T +D +IK + ++Y H H
Sbjct: 67 VHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPP----LIKSYLYQLLQGIAYCHSHR-- 119
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840
++HRD+ +N+L+D E ++DFG A+
Sbjct: 120 --VLHRDLKPQNLLIDREGALKLADFGLAR 147
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 39/285 (13%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG- 754
+G G G V K PSG +A K +H + + + + E+K L IV FYG
Sbjct: 9 LGAGNGGVVTKVLHRPSGLIMARKLIH-LEIKPAIRNQIIRELKVLHECNSPYIVGFYGA 67
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVN--VIKGVAHALSYMHHECRPP 812
F S S + E+++ GSL ++L + +++ V++G L+Y+ + +
Sbjct: 68 FYSDGEISICM-EHMDGGSLDQVLKKAGRIPENILGKISIAVLRG----LTYLREKHK-- 120
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEK 872
I+HRDV N+L++ E + DFG + L +N GT Y++PE T +
Sbjct: 121 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYTVQ 178
Query: 873 CDVYSFGVLALEVIKGQHP-----------------KDLLSSLSDSSLPGANMNE----A 911
D++S G+ +E+ G++P + + S + G + A
Sbjct: 179 SDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238
Query: 912 IDHMFD--ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM 954
I + D PPP L G + C+ NP+ R ++
Sbjct: 239 IFELLDYIVNEPPPKLPSGAFS--DEFQDFVDKCLKKNPKERADL 281
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 39/289 (13%)
Query: 683 EIIRSINNFDESFCIGRGGYGSVYKA--ELPSGD--TVAVKKLHSFTGETTHQKEFLSEI 738
EI R CIG G +G VY+ P + VAVK + T + +K FL E
Sbjct: 2 EIQREDITLGR--CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREK-FLQEA 58
Query: 739 KALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIK-- 796
+ H +IVK G + ++V E G L L ++I
Sbjct: 59 YIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQ----VNKYSLDLASLILYS 113
Query: 797 -GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT 855
++ AL+Y+ + VHRD++++NVL+ + DFG ++ L+ D S + G
Sbjct: 114 YQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE-DESYYKASKGK 169
Query: 856 Y--GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913
++APE + T DV+ FGV E++ L G N+ I
Sbjct: 170 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL----------MLGVKPFQGVKNNDVIG 219
Query: 914 HMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
+ + RLP P + ++ + C +P +RP ++ +L
Sbjct: 220 RIENGERLPMP------PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 2e-09
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 256 LSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFL 315
L L LRG +P+ +S L L+ ++L N + G+IP +G+ +L L + N F G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 316 PQNICQSGSLQYFSVHDNYFIGSLPKTL 343
P+++ Q SL+ +++ N G +P L
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 2e-09
Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 38/224 (16%)
Query: 691 FDESFCIGRGGYGSVYKA---ELPSGDTVAVKKLHSFTGETTHQKEF----LSEIKALTG 743
++ CIGRG YG VYKA G A+KK F G+ EI L
Sbjct: 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKK---FKGDKEQYTGISQSACREIALLRE 58
Query: 744 VRHRNIVKFYG-FCSHARHS-FLVYEYLERGSLARI-LSSETATEMDWSKRV-NVIKGVA 799
++H N+V F HA S +L+++Y E I + V +++ +
Sbjct: 59 LKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQIL 118
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH----VSDFGTAKLLKPDSSNWSELAG- 854
+ + Y+H ++HRD+ N+L+ E + D G A+L ++L
Sbjct: 119 NGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPV 175
Query: 855 --TYGYVAPELA-----YTMKVTEKCDVYSFG-----VLALEVI 886
T Y APEL YT + D+++ G +L LE I
Sbjct: 176 VVTIWYRAPELLLGARHYTKAI----DIWAIGCIFAELLTLEPI 215
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 2e-09
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
IGRG YG V A + + VA+KK+ + K L EIK L + H N++
Sbjct: 12 PIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKD 71
Query: 755 FCS-HARHSF----LVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYMHH 807
R +F +VYE ++ L +I+ S D + +++G L Y+H
Sbjct: 72 IMPPPHREAFNDVYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRG----LKYIH- 125
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL---- 863
++HRD+ N+LL+ + + DFG A+ +E T Y APEL
Sbjct: 126 --SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNC 183
Query: 864 -AYTMKVTEKCDVYSFGVLALEVIKGQ 889
YT + DV+S G + E++ +
Sbjct: 184 SEYTTAI----DVWSVGCIFAELLGRK 206
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 697 IGRGGYGSVYKAEL----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
IG G +G KA L G +K+++ ++E E+ L+ ++H NIV++
Sbjct: 8 IGEGSFG---KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQY 64
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
+ ++V +Y E G L + ++++ + ++ + AL ++H
Sbjct: 65 QESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---K 121
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA----GTYGYVAPELAYTMK 868
I+HRD+ S+N+ L + + DFG A++L ++ ELA GT Y++PE+
Sbjct: 122 ILHRDIKSQNIFLTKDGTIKLGDFGIARVL----NSTVELARTCIGTPYYLSPEICENRP 177
Query: 869 VTEKCDVYSFGVLALEVIKGQH 890
K D+++ G + E+ +H
Sbjct: 178 YNNKSDIWALGCVLYEMCTLKH 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHS----FTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G+G +G V E +G A+K L E H ++E + L RH +
Sbjct: 3 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNTRHPFLTA 59
Query: 752 F-YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
Y F +H R F V EY G L LS E + ++ + AL Y+H
Sbjct: 60 LKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTEERARFYGA--EIVSALEYLHSR-- 114
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT 870
+V+RD+ +N++LD + ++DFG K D + GT Y+APE+
Sbjct: 115 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 173
Query: 871 EKCDVYSFGVLALEVIKGQHP 891
D + GV+ E++ G+ P
Sbjct: 174 RAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 2e-09
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 38/219 (17%)
Query: 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHS-----FTGETTHQKEFLSEIKALTGV 744
F + +G+GG+G V ++ +G A KKL GE+ L+E + L V
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMA----LNEKQILEKV 57
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEM------------DWSKRV 792
R +V L Y Y + +L +L+ ++ + + V
Sbjct: 58 NSRFVVS------------LAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAV 105
Query: 793 NVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852
+ L +H E IV+RD+ +N+LLD +SD G A + P+
Sbjct: 106 FYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGR 161
Query: 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
GT GY+APE+ + T D ++ G L E+I GQ P
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 3e-09
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 40/212 (18%)
Query: 697 IGRGGYGSV-YKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV----- 750
+G G YG+V + +G VA+KKL+ K E++ L ++H N++
Sbjct: 23 VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDV 82
Query: 751 --------KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVN-VIKGVAHA 801
+F+ F +LV ++ L +++ E +E R+ ++ +
Sbjct: 83 FTPDLSLDRFHDF-------YLVMPFMGT-DLGKLMKHEKLSE----DRIQFLVYQMLKG 130
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG---TYGY 858
L Y+H I+HRD+ N+ ++ + E + DFG A+ + D SE+ G T Y
Sbjct: 131 LKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QTD----SEMTGYVVTRWY 181
Query: 859 VAPELAYT-MKVTEKCDVYSFGVLALEVIKGQ 889
APE+ M T+ D++S G + E++ G+
Sbjct: 182 RAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 3e-09
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 33/275 (12%)
Query: 697 IGRGGYGSVYKA--ELPSGDT--VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G +G + + +LPS VA+ L + ++ FL+E L H NIV+
Sbjct: 13 LGTGRFGELCRGCLKLPSKRELPVAIHTLRA-GCSDKQRRGFLAEALTLGQFDHSNIVRL 71
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
G + +V EY+ G+L L ++ + + ++ G+A + Y+
Sbjct: 72 EGVITRGNTMMIVTEYMSNGALDSFLRKHEG-QLVAGQLMGMLPGLASGMKYL---SEMG 127
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYG--YVAPELAYTMK 868
VH+ +++ VL++ + +S F L+ D S ++ ++G + APE
Sbjct: 128 YVHKGLAAHKVLVNSDLVCKISGFRR---LQEDKSEAIYTTMSGKSPVLWAAPEAIQYHH 184
Query: 869 VTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
+ DV+SFG++ EV+ G+ P +S G ++ +A++ F RLP P
Sbjct: 185 FSSASDVWSFGIVMWEVMSYGERPYWDMS--------GQDVIKAVEDGF--RLPAP---R 231
Query: 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ L ++ L C RP + +LS
Sbjct: 232 NCPNLLHQLM---LDCWQKERGERPRFSQIHSILS 263
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 3e-09
Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 52/234 (22%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFT----GETTHQKEFLSEIKALTGVRHRNIVK 751
IGRG +G V+ + +G A+K L + H +E L IVK
Sbjct: 9 IGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAH---VRAERDILADADSPWIVK 65
Query: 752 -FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSK--RVNVIKGVAHALSYMHHE 808
+Y F H +LV EY+ G L +L + + ++ ++ + ++ +
Sbjct: 66 LYYSF-QDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLAL-DSVHKLGF- 122
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSEL-------------- 852
+HRD+ N+L+D + H+ +DFG K + L
Sbjct: 123 -----IHRDIKPDNILID--ADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLV 175
Query: 853 ---------------AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
GT Y+APE+ +CD +S GV+ E++ G P
Sbjct: 176 RRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP 229
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 3e-09
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 40/221 (18%)
Query: 697 IGRGGYGSVYKAE----LPSGD--TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
IG+G +G V++A LP VAVK L Q +F E + H NIV
Sbjct: 13 IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKE-EASADMQADFQREAALMAEFDHPNIV 71
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR------------------- 791
K G C+ + L++EY+ G L L +
Sbjct: 72 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTE 131
Query: 792 -VNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG------TAKLLKP 844
+ + K VA ++Y+ VHRD++++N L+ ++DFG +A K
Sbjct: 132 QLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA 188
Query: 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 885
++ A ++ PE + + T + DV+++GV+ E+
Sbjct: 189 SEND----AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 225
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 3e-09
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 45/303 (14%)
Query: 683 EIIRSINNFDESFCIGRGGYGSVYKAEL--------------PSGDT---VAVKKLHSFT 725
E R F E +G G +G V+ E SG+ VAVK L
Sbjct: 1 EFPRKRLTFKEK--LGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRE-D 57
Query: 726 GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATE 785
+ +FL EIK ++ ++ NI++ C + ++ EY+E G L + LS E
Sbjct: 58 ANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQE 117
Query: 786 MDWSKRV------NVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839
V +I S M + VHRD++++N L+ Y ++DFG +
Sbjct: 118 AAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMS 177
Query: 840 KLLKPDSSNWSELAG----TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GQHPKD 893
+ L S ++ + G +++ E K T DV++FGV E++ + P
Sbjct: 178 RNLY--SGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQP-- 233
Query: 894 LLSSLSDSSLPGANMNEAI-DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
S LSD + N E D LP P L S+ ++ LSC N + RP
Sbjct: 234 -YSQLSDEQVI-ENTGEFFRDQGRQVYLPKPAL------CPDSLYKLMLSCWRRNAKERP 285
Query: 953 NMQ 955
+ Q
Sbjct: 286 SFQ 288
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 4e-09
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 22/233 (9%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN-----IVK 751
IGRG Y V L D + K+ E H E + ++ V + +V
Sbjct: 3 IGRGSYAKVLLVRLKKNDQIYAMKV--VKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
+ FLV EY+ G L + + + ++ + AL+++H
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAA--EICIALNFLHER--- 115
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKL-LKPDSSNWSELAGTYGYVAPELAYTMKVT 870
I++RD+ NVLLD + ++D+G K L P + S GT Y+APE+ +
Sbjct: 116 GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT-STFCGTPNYIAPEILRGEEYG 174
Query: 871 EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
D ++ GVL E++ G+ P D+++ D MN D++F L P
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIITDNPD-------MNTE-DYLFQVILEKP 219
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 5e-09
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 43/216 (19%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGVR-HRNIVKFY 753
+G+G YG V+KA + + + VA+KK+ +F T Q+ F EI L + H NIVK
Sbjct: 15 LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTF-REIMFLQELGDHPNIVKLL 73
Query: 754 GF--CSHARHSFLVYEYLE-------RGSLARILSSETATEMDWSKRVNVIKGVAHALSY 804
+ + +LV+EY+E R A IL D KR ++ + AL Y
Sbjct: 74 NVIKAENDKDIYLVFEYMETDLHAVIR---ANIL-------EDVHKRY-IMYQLLKALKY 122
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVA---- 860
+H ++HRD+ N+LL+ + ++DFG A+ L N T YVA
Sbjct: 123 IHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTD-YVATRWY 178
Query: 861 --PEL-----AYTMKVTEKCDVYSFGVLALEVIKGQ 889
PE+ YT V D++S G + E++ G+
Sbjct: 179 RAPEILLGSTRYTKGV----DMWSVGCILGEMLLGK 210
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 5e-09
Identities = 60/212 (28%), Positives = 87/212 (41%), Gaps = 28/212 (13%)
Query: 697 IGRGGYGSVYKAELPS-GDTVAVKKLHS-FTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
IG+GG G VY A P VA+KK+ + +K FL E K + H IV Y
Sbjct: 10 IGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYS 69
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP--- 811
CS + Y+E +L +L S E SK + V LS H C
Sbjct: 70 ICSDGDPVYYTMPYIEGYTLKSLLKSVWQKES-LSKELAEKTSVGAFLSIFHKICATIEY 128
Query: 812 ----PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD------------SSNWSELA-- 853
++HRD+ N+LL E + D+G A K + + +S +
Sbjct: 129 VHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIP 188
Query: 854 ----GTYGYVAPELAYTMKVTEKCDVYSFGVL 881
GT Y+APE + +E D+Y+ GV+
Sbjct: 189 GKIVGTPDYMAPERLLGVPASESTDIYALGVI 220
|
Length = 932 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 6e-09
Identities = 77/341 (22%), Positives = 120/341 (35%), Gaps = 100/341 (29%)
Query: 697 IGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGET-THQKEFLSEIKALTGV-RHRN 748
+G G +G V +A S +TVAVK L G T + K +SE+K L + H N
Sbjct: 15 LGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKE--GATASEHKALMSELKILIHIGNHLN 72
Query: 749 IVKFYG--------------FCSHA---------RHSFLVY------------------- 766
+V G FC + R F Y
Sbjct: 73 VVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSR 132
Query: 767 -EYLERGSLARILSSETATEMDWSKRVNVIK--------------------GVAHALSYM 805
+ A +L S + S N + VA + ++
Sbjct: 133 VDRRIEAGQASVLFSRF--QPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFL 190
Query: 806 -HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL--KPDSSNWSELAGTYGYVAPE 862
+C +HRD++++N+LL + DFG A+ + PD ++APE
Sbjct: 191 ASRKC----IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE 246
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--ARL 920
+ T + DV+SFGVL E+ SL S PG +NE R+
Sbjct: 247 SIFDKVYTTQSDVWSFGVLLWEIF----------SLGASPYPGVQINEEFCQRLKDGTRM 296
Query: 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
P E+ I + L+C +P+ RP + ++L
Sbjct: 297 RAP------ENATPEIYRIMLACWQGDPKERPTFSALVEIL 331
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 6e-09
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV----- 750
+G G YG V A +G VA+KKL H K E++ L + H N++
Sbjct: 23 VGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDV 82
Query: 751 --------KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH-- 800
F +LV + L I+ + ++ + I+ + +
Sbjct: 83 FTPASSLEDFQDV-------YLVTHLMGA-DLNNIVKCQKLSD-------DHIQFLVYQI 127
Query: 801 --ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG---T 855
L Y+H I+HRD+ N+ ++ + E + DFG A+ E+ G T
Sbjct: 128 LRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD------DEMTGYVAT 178
Query: 856 YGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQ 889
Y APE+ M + D++S G + E++ G+
Sbjct: 179 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 7e-09
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 32/216 (14%)
Query: 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHS-----FTGETTHQKEFLSEIKALTGV 744
F + +G+GG+G V ++ +G A K+L GE+ L+E + L V
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMA----LNEKQILEKV 57
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWS---------KRVNVI 795
+ +V L Y Y + +L +L+ ++ + + +
Sbjct: 58 NSQFVVN------------LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERAL 105
Query: 796 KGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT 855
A L + R V+RD+ +N+LLD +SD G A + P+ + GT
Sbjct: 106 FYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKI-PEGESIRGRVGT 164
Query: 856 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
GY+APE+ + T D + G L E+I+GQ P
Sbjct: 165 VGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 8e-09
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG-F 755
+GRG YG VYKA+ G L G T EI L ++H N++ F
Sbjct: 9 VGRGTYGHVYKAKRKDGKDDRDYALKQIEG-TGISMSACREIALLRELKHPNVISLQKVF 67
Query: 756 CSHA-RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY-----MHHEC 809
SHA R +L+++Y E L I+ A++ + K V + +G+ +L Y +H+
Sbjct: 68 LSHADRKVWLLFDYAEH-DLWHIIKFHRASKAN-KKPVQLPRGMVKSLLYQILDGIHYLH 125
Query: 810 RPPIVHRDVSSKNVLLDFE----YEAHVSDFGTAKL----LKPDSSNWSELAGTYGYVAP 861
++HRD+ N+L+ E ++D G A+L LKP ++ + T+ Y AP
Sbjct: 126 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP-LADLDPVVVTFWYRAP 184
Query: 862 ELAYTMK-VTEKCDVYSFGVLALEVIKGQ 889
EL + T+ D+++ G + E++ +
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLTSE 213
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 8e-09
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G Y +VYK +G VA+K + T E + E L G++H NIV +
Sbjct: 13 LGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTA-IREASLLKGLKHANIVLLHDI 71
Query: 756 CSHARHSF-LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
H + + V+EY+ LA+ + ++ R+ + + + L+Y+H + I+
Sbjct: 72 I-HTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQ-LLRGLAYIHGQ---HIL 125
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTMKVTEKC 873
HRD+ +N+L+ + E ++DFG A+ S +S T Y P+ L +
Sbjct: 126 HRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSAL 185
Query: 874 DVYSFGVLALEVIKGQ 889
D++ G + +E+++GQ
Sbjct: 186 DIWGAGCIFIEMLQGQ 201
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 8e-09
Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 697 IGRGGYGSVYKAELPSGDTV-AVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK--FY 753
IGRG +G V S V A+K L F F E + + + V FY
Sbjct: 51 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 110
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
F R+ ++V EY+ G L ++S+ E W++ V AL +H
Sbjct: 111 AF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTA--EVVLALDAIHSM---GF 163
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA-GTYGYVAPELAYTMK---- 868
+HRDV N+LLD ++DFGT + + + A GT Y++PE+ +
Sbjct: 164 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 223
Query: 869 VTEKCDVYSFGVLALEVIKGQHP 891
+CD +S GV E++ G P
Sbjct: 224 YGRECDWWSVGVFLYEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 9e-09
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G YGSV A + +G VAVKKL H K E++ L ++H N++
Sbjct: 25 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 84
Query: 756 CSHAR-----HSFLVYEYLERGSLARILSSETATEMDWSKRVN-VIKGVAHALSYMHHEC 809
+ AR + + +L L I+ + T+ V +I + L Y+H
Sbjct: 85 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD----DHVQFLIYQILRGLKYIH--- 137
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-MK 868
I+HRD+ N+ ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 138 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMH 194
Query: 869 VTEKCDVYSFGVLALEVIKGQ 889
+ D++S G + E++ G+
Sbjct: 195 YNQTVDIWSVGCIMAELLTGR 215
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 55/293 (18%)
Query: 697 IGRGGYGSVYKAEL---PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
IG G +G V +E+ V VK+L + + Q EFL + ++H NI++
Sbjct: 3 IGNGWFGKVLLSEIYTDTGVARVVVKELKA-NASSKEQNEFLQQGDPYRILQHPNILQCL 61
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIK-------GVAHALSYMH 806
G C A LV+EY E G L LS E W +R + + +A +++MH
Sbjct: 62 GQCVEAIPYLLVFEYCELGDLKSYLSQE-----QWHRRNSQLLLLQRMACEIAAGVTHMH 116
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA------KLLKPDSSNWSELAGTYGYVA 860
+ +H D++ +N L + V D+G ++ + L ++A
Sbjct: 117 ---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLR----WLA 169
Query: 861 PELA-------YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913
PEL T + T+ +V++ GV E+ ++ S LSD E ++
Sbjct: 170 PELVGEFHGGLITAEQTKPSNVWALGVTLWELF--ENAAQPYSHLSD--------REVLN 219
Query: 914 HMF---DARLPPPWLEVGVEDKLKSIIEVA-LSCVDANPERRPNMQIVCKLLS 962
H+ +L P LE+ ++ +++ LS PE+R + V +LL+
Sbjct: 220 HVIKDQQVKLFKPQLELPYSERWYEVLQFCWLS-----PEKRATAEEVHRLLT 267
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 1e-08
Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 29/209 (13%)
Query: 697 IGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFL---SEIKAL----------T 742
+GRG +G V AE +G+ A+K L +K + E+++L
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKAL---------KKGDIIARDEVESLMCEKRIFETAN 57
Query: 743 GVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHAL 802
RH +V + H V EY G L + ++ +E + V V L
Sbjct: 58 SERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSE---PRAVFYAACVVLGL 114
Query: 803 SYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE 862
Y+H IV+RD+ N+LLD E ++DFG K S GT ++APE
Sbjct: 115 QYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPE 171
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+ T D + GVL E++ G+ P
Sbjct: 172 VLTETSYTRAVDWWGLGVLIYEMLVGESP 200
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 697 IGRGGYGSVYKAEL-PSGDTVAVKKLHS-----FTGETTHQKEFLSEIKALTGVRHRNIV 750
+G+GG+G V ++ +G A KKL GE L+E + L V R +V
Sbjct: 8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA----LNEKRILEKVNSRFVV 63
Query: 751 KFYGFCSHARHSF-LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ + + LV + G L + + D + + + L + E
Sbjct: 64 SL-AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE- 121
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
IV+RD+ +N+LLD +SD G A + P+ GT GY+APE+ K
Sbjct: 122 --RIVYRDLKPENILLDDRGHIRISDLGLAVQI-PEGETVRGRVGTVGYMAPEVINNEKY 178
Query: 870 TEKCDVYSFGVLALEVIKGQHP 891
T D + G L E+I+GQ P
Sbjct: 179 TFSPDWWGLGCLIYEMIQGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 2e-08
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 697 IGRGGYGSVY---KAELPSGDTVAVK-----KLHSFTGETTHQKEFLSEIKALTGVRHRN 748
IGRGG+G VY KA+ +G A+K ++ GET E + TG
Sbjct: 2 IGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 59
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSE---TATEMDWSKRVNVIKGVAHALSYM 805
+ Y F + + SF++ + + G L LS + EM + +I G+ H M
Sbjct: 60 VCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEAEMRFYA-AEIILGLEH----M 113
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA---KLLKPDSSNWSELAGTYGYVAPE 862
H+ +V+RD+ N+LLD +SD G A KP +S GT+GY+APE
Sbjct: 114 HNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPE 165
Query: 863 -LAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
L + D +S G + ++++G P
Sbjct: 166 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 2e-08
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKL-HSFTGETTHQKEFLSEIKALTGVRHRNIVKF-Y 753
+G+GG+G V ++ +G A KKL + + +K L E + L V IV Y
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAY 60
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
F S H LV + G L + + ++ + VI A + H I
Sbjct: 61 AFESKT-HLCLVMSLMNGGDLKYHIYNVGERGLEMER---VIHYSAQITCGILHLHSMDI 116
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC 873
V+RD+ +NVLLD + +SD G A L D ++ AGT GY+APE+ +
Sbjct: 117 VYRDMKPENVLLDDQGNCRLSDLGLAVEL-KDGKTITQRAGTNGYMAPEILKEEPYSYPV 175
Query: 874 DVYSFGVLALEVIKGQHP 891
D ++ G E++ G+ P
Sbjct: 176 DWFAMGCSIYEMVAGRTP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 697 IGRGGYGSVYKAELPSGDTV----AVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVK 751
IG+G +G V + + ++K H + E TH L+E L V IV
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHT---LAERTVLAQVNCPFIVP 57
Query: 752 F-YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+ F S + +LV ++ G L L E D S+ + AL +H +
Sbjct: 58 LKFSFQSPEK-LYLVLAFINGGELFHHLQREG--RFDLSRARFYTAELLCALENLH---K 111
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT 870
+++RD+ +N+LLD++ + DFG KL D + GT Y+APEL T
Sbjct: 112 FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYT 171
Query: 871 EKCDVYSFGVLALEVIKGQHP 891
+ D ++ GVL E++ G P
Sbjct: 172 KAVDWWTLGVLLYEMLTGLPP 192
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 2e-08
Identities = 64/286 (22%), Positives = 111/286 (38%), Gaps = 51/286 (17%)
Query: 697 IGRGGYGSVYKAEL--PSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G +G +YK L P D VA+K L EF E + + H NIV
Sbjct: 13 LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVC 71
Query: 752 FYGFCSHARHSFLVYEYLERGSLARIL------------SSETAT---EMDWSKRVNVIK 796
G + + +++EYL +G L L S E T +D +++
Sbjct: 72 LLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT- 855
+A + Y+ VH+D++++N+L+ + +SD G ++ + S+++ +
Sbjct: 132 QIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIY--SADYYRVQPKS 186
Query: 856 ---YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEA 911
++ PE K + D++SFGV+ E+ G P S N+
Sbjct: 187 LLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS------------NQE 234
Query: 912 IDHMFDAR--LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ M R LP ED + + C P RRP +
Sbjct: 235 VIEMVRKRQLLPCS------EDCPPRMYSLMTECWQEGPSRRPRFK 274
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 2e-08
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G G V A + G VAVKKL TH K E+ L V H+NI+
Sbjct: 29 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 88
Query: 756 CSHAR------HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ + +LV E ++ +L +++ E+D + ++ + + ++H
Sbjct: 89 FTPQKSLEEFQDVYLVMELMD-ANLCQVIH----MELDHERMSYLLYQMLCGIKHLH--- 140
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW--SELAGTYGYVAPELAYTM 867
I+HRD+ N+++ + + DFG A+ +N+ + T Y APE+ M
Sbjct: 141 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYVVTRYYRAPEVILGM 197
Query: 868 KVTEKCDVYSFGVLALEVIKG 888
E D++S G + E++KG
Sbjct: 198 GYKENVDIWSVGCIMGELVKG 218
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG 857
++ L ++H R I++RD+ NV+LD E ++DFG K D GT
Sbjct: 110 ISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPD 166
Query: 858 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKD 893
Y+APE+ + D +++GVL E++ GQ P D
Sbjct: 167 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 202
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 2e-08
Identities = 64/291 (21%), Positives = 124/291 (42%), Gaps = 55/291 (18%)
Query: 697 IGRGGYGSVYKA---ELPSGDT---VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G+G +G VY+ ++ G+ VAVK ++ + + EFL+E + G ++V
Sbjct: 14 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE-SASLRERIEFLNEASVMKGFTCHHVV 72
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSS-------------ETATEMDWSKRVNVIKG 797
+ G S + + +V E + G L L S T EM + +
Sbjct: 73 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAE 127
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG-TAKLLKPDSSNWSELAGTY 856
+A ++Y++ + VHRD++++N ++ ++ + DFG T + + D G
Sbjct: 128 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR----KGGK 180
Query: 857 G-----YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911
G ++APE T D++SFGV+ E+ +SL++ G + +
Sbjct: 181 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI----------TSLAEQPYQGLSNEQV 230
Query: 912 IDHMFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+ + D L P +++ ++ + C NP+ RP + LL
Sbjct: 231 LKFVMDGGYLDQP---DNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 3e-08
Identities = 65/248 (26%), Positives = 101/248 (40%), Gaps = 58/248 (23%)
Query: 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKA----LTGV 744
++F+ IGRG +G V + DT + + +KE ++ I+A L
Sbjct: 1 DDFESLKVIGRGAFGEVRLVQ--KKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA 58
Query: 745 RHRNIVK-FYGFCSHARHSFLVYEYLERGSLARILS-----SETATEMDWSKRVNVIKGV 798
+VK FY F R+ +L+ E+L G + +L SE AT+ ++ V I +
Sbjct: 59 DGAWVVKMFYSF-QDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAI 117
Query: 799 AHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK--------------P 844
H L + +HRD+ N+LLD + +SDFG LK P
Sbjct: 118 -HQLGF---------IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNP 167
Query: 845 DS-----------------SNWSELA----GTYGYVAPELAYTMKVTEKCDVYSFGVLAL 883
S N +LA GT Y+APE+ + CD +S GV+
Sbjct: 168 PSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227
Query: 884 EVIKGQHP 891
E++ G P
Sbjct: 228 EMLIGYPP 235
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 4e-08
Identities = 74/316 (23%), Positives = 122/316 (38%), Gaps = 75/316 (23%)
Query: 697 IGRGGYGSVYKAE------LPSGD-----------TVAVKKLHSFTGETTHQKEFLSEIK 739
+G G +G V+ E LP+ VAVK L + + +FL E+K
Sbjct: 13 LGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNA-RNDFLKEVK 71
Query: 740 ALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVA 799
L+ ++ NI++ G C ++ EY+E G L + LSS D + N A
Sbjct: 72 ILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHL--DDKEENGNDAVPPA 129
Query: 800 H---ALSY-------------MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843
H A+SY M + VHRD++++N L+ ++DFG ++ L
Sbjct: 130 HCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNL- 188
Query: 844 PDSSNWSELAGTY-----------GYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GQH 890
AG Y ++A E K T DV++FGV E++ +
Sbjct: 189 --------YAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240
Query: 891 PKDLLSSLSDSSL---PGANMNEAIDHMFDARLPP-PWLEVGVEDKLKSIIEVALSCVDA 946
P L+D + G + ++ R PP P + + E+ L C
Sbjct: 241 P---YGELTDEQVIENAGEFFRDQGRQVYLFRPPPCP----------QGLYELMLQCWSR 287
Query: 947 NPERRPNMQIVCKLLS 962
+ RP+ + L+
Sbjct: 288 DCRERPSFSDIHAFLT 303
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 4e-08
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G Y +VYK +G+ VA+K++H E T + EI + ++H NIV+ +
Sbjct: 8 LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTA-IREISLMKELKHENIVRLHDV 66
Query: 756 CSHARHSFLVYEYLERGSLARILSSET---ATEMDWSKRV--NVIKGVAHALSYMHHECR 810
LV+EY++ L + + + A + + K ++KG+A HE R
Sbjct: 67 IHTENKLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFC-----HENR 120
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV- 869
++HRD+ +N+L++ E ++DFG A+ + +S T Y AP++ +
Sbjct: 121 --VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTY 178
Query: 870 TEKCDVYSFGVLALEVIKG 888
+ D++S G + E+I G
Sbjct: 179 STSIDIWSVGCIMAEMITG 197
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 4e-08
Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 54/278 (19%)
Query: 700 GGYGSVYKAELPSGDTVAVKKLHSFTGETTHQ---KEFLSEIKALTGVRHRNIVKFYGFC 756
G YG ++K E V +K L + +H+ + F ++ + H+++V YG C
Sbjct: 20 GDYGELHKTE------VLLKVL-----DKSHRNYSESFFEAASMMSQLSHKHLVLNYGVC 68
Query: 757 SHARHSFLVYEYLERGSLARILS-SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
S +V EY++ GSL L ++ + W ++ V K +A AL ++ + + H
Sbjct: 69 VCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KLEVAKQLAWALHFLEDK---GLTH 123
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS------NWSELAGTYGYVAPE-LAYTMK 868
+V +KNVLL E + + KL P S L +V PE +
Sbjct: 124 GNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEI--LLERIPWVPPECIENPQN 181
Query: 869 VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF-DAR--LPPP-W 924
++ D +SFG E+ G P + ++ F + R LP P W
Sbjct: 182 LSLAADKWSFGTTLWEIFSG------------GDKPLSALDSQKKLQFYEDRHQLPAPKW 229
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
E L ++I C+D P+ RP+ + + + L+
Sbjct: 230 TE------LANLIN---QCMDYEPDFRPSFRAIIRDLN 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 5e-08
Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 448 LILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEI 507
L L+ L G IP ++ L L ++LS N +IP ++G + L L++S N F+ I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 508 PIQLGKLVQLSELDLSHNLLRGEIP 532
P LG+L L L+L+ N L G +P
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 6e-08
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 697 IGRGGYGSVYKA-ELPSGDT-VAVKKLHSFTGETTHQKEFLSEI---KALTGVRHRNIVK 751
IG G YG V+KA +L +G VA+K++ TGE + E+ + L H N+V+
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68
Query: 752 FYGFCSHARHS-----FLVYEYLERG---SLARILSSETATEMDWSKRVNVIKGVAHALS 803
+ C+ +R LV+E++++ L ++ TE +++G L
Sbjct: 69 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG----LD 124
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL 863
++H +VHRD+ +N+L+ + ++DFG A++ + + + T Y APE+
Sbjct: 125 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-TSVVVTLWYRAPEV 180
Query: 864 AYTMKVTEKCDVYSFGVLALEVIK 887
D++S G + E+ +
Sbjct: 181 LLQSSYATPVDLWSVGCIFAEMFR 204
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 6e-08
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG+V+KA + + VA+K++ + L EI L ++H+NIV+ Y
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV 67
Query: 756 CSHARHSFLVYEYLERGSLARILSS---ETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
+ LV+EY ++ L + S + E+ S ++KG+A S H+
Sbjct: 68 LHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHS--HN----- 119
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV-TE 871
++HRD+ +N+L++ E ++DFG A+ +S T Y P++ + K+ +
Sbjct: 120 VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 179
Query: 872 KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916
D++S G + E+ P PG ++++ + +F
Sbjct: 180 SIDMWSAGCIFAELANAGRP----------LFPGNDVDDQLKRIF 214
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 9/200 (4%)
Query: 697 IGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEF---LSEIKALTGVRHRNIVKF 752
+G+GG+G V ++ +G A KKL+ +K + + E + L V R IV
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNK--KRLKKRKGYEGAMVEKRILAKVHSRFIVSL 58
Query: 753 -YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
Y F + LV + G L R E A +S + H +
Sbjct: 59 AYAFQTKTDLC-LVMTIMNGGDL-RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR 116
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
I++RD+ +NVLLD + +SD G A LK S AGT G++APEL +
Sbjct: 117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDF 176
Query: 872 KCDVYSFGVLALEVIKGQHP 891
D ++ GV E+I + P
Sbjct: 177 SVDYFALGVTLYEMIAARGP 196
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 1e-07
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 42/221 (19%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-----RHRNIVK 751
IGRG Y V EL + K+ E + E + ++ V H +V
Sbjct: 3 IGRGSYAKVLLVELKKTRRIYAMKV--IKKELVNDDEDIDWVQTEKHVFETASNHPFLVG 60
Query: 752 FYGFCSHARHSFLVYEYLERGSL--------------ARILSSETATEMDWSKRVNVIKG 797
+ F V E++ G L AR S+E
Sbjct: 61 LHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAE---------------- 104
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL-LKPDSSNWSELAGTY 856
++ AL+++H I++RD+ NVLLD E ++D+G K ++P + S GT
Sbjct: 105 ISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT-STFCGTP 160
Query: 857 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSS 897
Y+APE+ D ++ GVL E++ G+ P D++
Sbjct: 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGM 201
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 1e-07
Identities = 49/226 (21%), Positives = 91/226 (40%), Gaps = 44/226 (19%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLH--SFTGETTHQKEF----------LSEIKALTG 743
+G G YG V KA +G VA+KK+ + + T ++ L E+K +
Sbjct: 17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76
Query: 744 VRHRNIVKFYG-FCSHARHSF--LVYEYLERGSLARILSSETATEMDWSKRV--NVIKGV 798
++H NI+ + F LV + + L +++ + K + ++ G+
Sbjct: 77 IKHENIMGLVDVYVEG---DFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGL 132
Query: 799 AHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK-----LLKPDSSNWSELA 853
+ L H+ +HRD+S N+ ++ + ++DFG A+ S +
Sbjct: 133 -NVL----HKWY--FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQ 185
Query: 854 G---------TYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGQ 889
T Y APEL K D++S G + E++ G+
Sbjct: 186 RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231
|
Length = 335 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 1e-07
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 8/198 (4%)
Query: 697 IGRGGYGSVYKAELPS-GDTVAVKKLHSFT-GETTHQKEFLSEIKAL-TGVRHRNIVKFY 753
IG+G +G V A+ S G AVK L T + Q ++E L ++H +V +
Sbjct: 3 IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
A + V +Y+ G L L E ++ R + VA A+ Y+H I
Sbjct: 63 YSFQTAEKLYFVLDYVNGGELFFHLQRERCF-LEPRARFYAAE-VASAIGYLHSL---NI 117
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC 873
++RD+ +N+LLD + ++DFG K S GT Y+APE+
Sbjct: 118 IYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTV 177
Query: 874 DVYSFGVLALEVIKGQHP 891
D + G + E++ G P
Sbjct: 178 DWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 1e-07
Identities = 56/280 (20%), Positives = 118/280 (42%), Gaps = 49/280 (17%)
Query: 697 IGRGGYGSVYKA-------ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNI 749
+G+G +G VY+ + P VA+K ++ + EFL+E + ++
Sbjct: 14 LGQGSFGMVYEGIAKGVVKDEPE-TRVAIKTVNE-AASMRERIEFLNEASVMKEFNCHHV 71
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMD--------WSKRVNVIKGVAHA 801
V+ G S + + ++ E + RG L L S + K + + +A
Sbjct: 72 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG 131
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT----YG 857
++Y++ VHRD++++N ++ ++ + DFG + + +++ G
Sbjct: 132 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 186
Query: 858 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917
+++PE T DV+SFGV+ E+ ++L++ G + + + +
Sbjct: 187 WMSPESLKDGVFTTYSDVWSFGVVLWEI----------ATLAEQPYQGMSNEQVLRFV-- 234
Query: 918 ARLPPPWLEVGVEDKLKS----IIEVALSCVDANPERRPN 953
+E G+ DK + + E+ C NP+ RP+
Sbjct: 235 -------MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 267
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 2e-07
Identities = 72/275 (26%), Positives = 103/275 (37%), Gaps = 57/275 (20%)
Query: 672 ILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTH 730
LT +G+ Y + + N E IG G G VYK +G +AVK++ T
Sbjct: 2 YLTIDGQK-YPADLNDLENLGE---IGSGTCGQVYKMRFKKTGHVMAVKQMRR-----TG 52
Query: 731 QKEFLSEIKALTGVR-----HR--NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETA 783
KE I L + H IVK YG Y S I +
Sbjct: 53 NKEENKRI--LMDLDVVLKSHDCPYIVKCYG-------------YFITDSDVFICMELMS 97
Query: 784 TEMD-WSKRVN----------VIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH 832
T +D KR+ + + AL Y+ + ++HRDV N+LLD
Sbjct: 98 TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVK 155
Query: 833 VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEK----CDVYSFGVLALEVIKG 888
+ DFG + L DS + AG Y+APE K DV+S G+ +E+ G
Sbjct: 156 LCDFGISGRLV-DSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATG 214
Query: 889 QHPK-------DLLSSLSDSSLPGANMNEAIDHMF 916
Q P ++L+ + P NE F
Sbjct: 215 QFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDF 249
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG VYK +G VA+KK+ + E + EI L ++H NIV
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDV 67
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATE-MDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+L++E+L L + L S + MD + + + + + H ++
Sbjct: 68 LMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVL 123
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL-----AYTMKV 869
HRD+ +N+L+D + ++DFG A+ ++ T Y APE+ Y+ V
Sbjct: 124 HRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPV 183
Query: 870 TEKCDVYSFGVLALEVI 886
D++S G + E+
Sbjct: 184 ----DIWSIGTIFAEMA 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 2e-07
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEK 872
I++RD+ NV+LD E ++DFG K D GT Y+APE+ +
Sbjct: 122 IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKS 181
Query: 873 CDVYSFGVLALEVIKGQHPKD 893
D ++FGVL E++ GQ P +
Sbjct: 182 VDWWAFGVLLYEMLAGQAPFE 202
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 2e-07
Identities = 77/333 (23%), Positives = 120/333 (36%), Gaps = 97/333 (29%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNI 749
+GRG +G V +A+ D TVAVK L + H + +SE+K L + H N+
Sbjct: 15 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 73
Query: 750 VKFYG--------------FCSHA---------RHSFLVYE------------------- 767
V G FC R F+ Y+
Sbjct: 74 VNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISED 133
Query: 768 ------------------YLERGSLARILSSETATEMDWSKRVNVIKG-------VAHAL 802
++E SL+ + E E D K+V ++ VA +
Sbjct: 134 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQE-DLYKKVLTLEDLICYSFQVAKGM 192
Query: 803 SYM-HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL--KPDSSNWSELAGTYGYV 859
++ +C +HRD++++N+LL + DFG A+ + PD + ++
Sbjct: 193 EFLASRKC----IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 248
Query: 860 APELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919
APE + T + DV+SFGVL E+ SL S PG ID F R
Sbjct: 249 APETIFDRVYTIQSDVWSFGVLLWEIF----------SLGASPYPGVK----IDEEFCRR 294
Query: 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
L + + + L C P +RP
Sbjct: 295 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 327
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 2e-07
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKE---FLSEIKALTGVRHRNIVKF 752
+G G +G V A+ +G+ A+K L E K+ E L + H IV
Sbjct: 26 LGTGSFGRVRIAKHKGTGEYYAIKCLKK--REILKMKQVQHVAQEKSILMELSHPFIVNM 83
Query: 753 Y-GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
F R FL+ E++ G L L D +K + + A Y+H
Sbjct: 84 MCSFQDENRVYFLL-EFVVGGELFTHLRKAGRFPNDVAKFYHA--ELVLAFEYLH-SKD- 138
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
I++RD+ +N+LLD + V+DFG AK + PD + L GT Y+APE+ + +
Sbjct: 139 -IIYRDLKPENLLLDNKGHVKVTDFGFAKKV-PDRT--FTLCGTPEYLAPEVIQSKGHGK 194
Query: 872 KCDVYSFGVLALEVIKGQHP 891
D ++ GVL E I G P
Sbjct: 195 AVDWWTMGVLLYEFIAGYPP 214
|
Length = 329 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG 857
+A L ++H + I++RD+ NV+LD E ++DFG K GT
Sbjct: 110 IAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPD 166
Query: 858 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKD------LLSSLSDS--SLPGANMN 909
Y+APE+ + D ++FGVL E++ GQ P D L S+ + S P +
Sbjct: 167 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSK 226
Query: 910 EAI 912
EA+
Sbjct: 227 EAV 229
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE----FLSEIKALTGVRHRNIVK 751
+G+G +G V E +G A+K L E K+ L+E + L RH +
Sbjct: 3 LGKGTFGKVILVREKATGKYYAMKILKK---EVIIAKDEVAHTLTESRVLQNTRHPFLTA 59
Query: 752 F-YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
Y F +H R F V EY G L LS E D ++ + AL Y+H
Sbjct: 60 LKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSEDRARFYGA--EIVSALGYLH---S 113
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT 870
+V+RD+ +N++LD + ++DFG K D + GT Y+APE+
Sbjct: 114 CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 173
Query: 871 EKCDVYSFGVLALEVIKGQHP 891
D + GV+ E++ G+ P
Sbjct: 174 RAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 3e-07
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 697 IGRGGYGSVY---KAELPSGDTVAVK-----KLHSFTGETTHQKEFLSEIKALTGVRHRN 748
IGRGG+G VY KA+ +G A+K ++ GET E + TG
Sbjct: 2 IGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 59
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSE---TATEMDWSKRVNVIKGVAHALSYM 805
+ Y F + + F++ + + G L LS + EM + +I G+ H M
Sbjct: 60 VCMTYAFHTPDKLCFIL-DLMNGGDLHYHLSQHGVFSEKEMRFYA-TEIILGLEH----M 113
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA---KLLKPDSSNWSELAGTYGYVAPE 862
H+ +V+RD+ N+LLD +SD G A KP +S GT+GY+APE
Sbjct: 114 HNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPE 165
Query: 863 -LAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
L D +S G + ++++G P
Sbjct: 166 VLQKGTAYDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 3e-07
Identities = 68/259 (26%), Positives = 106/259 (40%), Gaps = 42/259 (16%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY-- 753
IG G +G V+ P G VA+KK+ + K E+K L +H N++
Sbjct: 8 IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDI 67
Query: 754 ---GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSK--RVNVIKGVAHALSYMHHE 808
++V E L + L +I+ S D K +++G L Y+H
Sbjct: 68 LQPPHIDPFEEIYVVTE-LMQSDLHKIIVSPQPLSSDHVKVFLYQILRG----LKYLH-- 120
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW--SELAGTYGYVAPELA-- 864
I+HRD+ N+L++ + DFG A++ +PD S E+ Y Y APE+
Sbjct: 121 -SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQY-YRAPEILMG 178
Query: 865 ---YTMKVTEKCDVYSFGVLALEVIKG------QHP-------KDLLSSLSDSSLPGANM 908
YT V D++S G + E++ Q P DLL + S ++ A
Sbjct: 179 SRHYTSAV----DIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA-C 233
Query: 909 NEAIDHMFDARLPPPWLEV 927
A H+ PP L V
Sbjct: 234 EGARAHILRGPHKPPSLPV 252
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 3e-07
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 25/225 (11%)
Query: 736 SEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSK-RVNV 794
SE+ L H IVK + L+ EY G L + + + + + V +
Sbjct: 114 SELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGL 173
Query: 795 I-KGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW---S 850
+ + AL +H ++HRD+ S N+ L + DFG +K DS + S
Sbjct: 174 LFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYS-DSVSLDVAS 229
Query: 851 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910
GT Y+APEL + ++K D++S GV+ E++ P G + E
Sbjct: 230 SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRP-----------FKGPSQRE 278
Query: 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ + + P V +K++++ LS NP RP Q
Sbjct: 279 IMQQVLYGKYDP--FPCPVSSGMKALLDPLLS---KNPALRPTTQ 318
|
Length = 478 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 3e-07
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG-F 755
+GRG YG VYKA+ G L G T EI L ++H N++ F
Sbjct: 9 VGRGTYGHVYKAKRKDGKDEKEYALKQIEG-TGISMSACREIALLRELKHPNVIALQKVF 67
Query: 756 CSHA-RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY-----MHHEC 809
SH+ R +L+++Y E L I+ A++ + K + + + + +L Y +H+
Sbjct: 68 LSHSDRKVWLLFDYAEH-DLWHIIKFHRASKAN-KKPMQLPRSMVKSLLYQILDGIHYLH 125
Query: 810 RPPIVHRDVSSKNVLLDFE----YEAHVSDFGTAKL----LKPDSSNWSELAGTYGYVAP 861
++HRD+ N+L+ E ++D G A+L LKP ++ + T+ Y AP
Sbjct: 126 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP-LADLDPVVVTFWYRAP 184
Query: 862 ELAYTMK-VTEKCDVYSFGVLALEVIKGQ 889
EL + T+ D+++ G + E++ +
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLTSE 213
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 3e-07
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 57/302 (18%)
Query: 683 EIIRSINNFDESFCIGRGGYGSVYKAEL----PSGDT--VAVKKLHSFTGETTHQKEFLS 736
EI S F E +G +G VYK L P T VA+K L E ++EF
Sbjct: 1 EINLSTVRFMEE--LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKD-KAEGPLREEFKH 57
Query: 737 EIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL------SSETATEMDWSK 790
E + ++H NIV G + + +++ Y L L S +T+ D +
Sbjct: 58 EAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTV 117
Query: 791 R--------VNVIKGVAHALSYM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840
+ V+++ +A + ++ HH +VH+D++++NVL+ + +SD G +
Sbjct: 118 KSTLEPADFVHIVTQIAAGMEFLSSHH-----VVHKDLATRNVLVFDKLNVKISDLGLFR 172
Query: 841 LLKPDSSNWSELAGT----YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLL 895
+ ++++ +L G +++PE K + D++S+GV+ EV G P
Sbjct: 173 EVY--AADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 230
Query: 896 SSLSDSSLPGANMNEAIDHMFDAR--LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN 953
S N+ + M R LP P +D + + L C + P RRP
Sbjct: 231 S------------NQDVIEMIRNRQVLPCP------DDCPAWVYTLMLECWNEFPSRRPR 272
Query: 954 MQ 955
+
Sbjct: 273 FK 274
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 30/209 (14%)
Query: 697 IGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEF-LSEIKALTGVRHRNIVKFYG 754
+G+GG+G V ++ +G A KKL + + L+E + L V R +V
Sbjct: 8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS--- 64
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEM------------DWSKRVNVIKGVAHAL 802
L Y Y + +L +L+ ++ D + V + L
Sbjct: 65 ---------LAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGL 115
Query: 803 SYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE 862
+H E IV+RD+ +N+LLD +SD G A + P+ GT GY+APE
Sbjct: 116 EDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEI-PEGETIRGRVGTVGYMAPE 171
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+ + T D + G L E+I+G+ P
Sbjct: 172 VVKNERYTFSPDWWGLGCLIYEMIEGKSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 3e-07
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 31/211 (14%)
Query: 697 IGRGGYGSVYKAELPSGDT-------VAVKKLHSFTGETTH--------QKEFLSEIKAL 741
IG+G +G VY+ DT V KK E H + L E +
Sbjct: 1 IGKGTFGQVYQVR--KKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFI 58
Query: 742 TGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHA 801
G++ + F + +LV +Y+ G L L E D +K I + A
Sbjct: 59 VGLK-------FSFQT-DSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFY--IAELVLA 108
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAP 861
L ++H + IV+RD+ +N+LLD + DFG +K D+ + GT Y+AP
Sbjct: 109 LEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAP 165
Query: 862 ELAYTMK-VTEKCDVYSFGVLALEVIKGQHP 891
E+ K T+ D +S GVL E+ G P
Sbjct: 166 EVLLDEKGYTKHVDFWSLGVLVFEMCCGWSP 196
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (127), Expect = 5e-07
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 30/202 (14%)
Query: 736 SEIKALTGVRHRNIVKF--------YGFCSHARHSFLVYEYLERGSLARILSSETATEMD 787
+EI AL + H NI+K + ++ F +Y ++ + +
Sbjct: 212 NEILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAF-----DWKDRPLL 266
Query: 788 WSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA----KLLK 843
R ++K + A+ Y+H + ++HRD+ +N+ L+ + + + DFGTA K +
Sbjct: 267 KQTR-AIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE 322
Query: 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL 903
W GT +PE+ E D++S G++ L+++ D
Sbjct: 323 AFDYGW---VGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS----HDFCPIGDGGGK 375
Query: 904 PGANMNEAIDHMF--DARLPPP 923
PG + + ID + D P P
Sbjct: 376 PGKQLLKIIDSLSVCDEEFPDP 397
|
Length = 501 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 5e-07
Identities = 63/243 (25%), Positives = 97/243 (39%), Gaps = 61/243 (25%)
Query: 697 IGRGGYGSV-YKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKA----LTGVRHRNIVK 751
IGRG +G V + +G A+KKL +KE ++ ++A L + +VK
Sbjct: 9 IGRGAFGEVRLVQKKDTGHIYAMKKLRK---SEMLEKEQVAHVRAERDILAEADNPWVVK 65
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILS-----SETATEMDWSKRVNVIKGVAHALSYMH 806
Y + +L+ EYL G + +L +E T ++ + I + H L Y
Sbjct: 66 LYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSI-HKLGY-- 122
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK----------------------- 843
+HRD+ N+LLD + +SDFG LK
Sbjct: 123 -------IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFI 175
Query: 844 --PDSS-----NWSE----LA----GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG 888
P SS W LA GT Y+APE+ ++CD +S GV+ E++ G
Sbjct: 176 SKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235
Query: 889 QHP 891
P
Sbjct: 236 YPP 238
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 6e-07
Identities = 43/214 (20%), Positives = 78/214 (36%), Gaps = 31/214 (14%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
C + K + P+ VAVKK++ + K EI ++H NI+ +
Sbjct: 9 CFEDLMIVHLAKHK-PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTS 67
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
++V + GS +L + + ++K V +AL Y+H + +H
Sbjct: 68 FIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIH 124
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTA--------KLLKPDSS--------NWSELAGTYGYV 859
R V + ++LL + + +S + + W
Sbjct: 125 RSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWL--------- 175
Query: 860 APELAYT--MKVTEKCDVYSFGVLALEVIKGQHP 891
+PE+ EK D+YS G+ A E+ G P
Sbjct: 176 SPEVLQQNLQGYNEKSDIYSVGITACELANGHVP 209
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 6e-07
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 6/193 (3%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G Y +VYK + + K+ E + E L G++H NIV +
Sbjct: 13 LGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII 72
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
LV+EY+ L + + + ++ + + + LSY+H I+HR
Sbjct: 73 HTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQ-LLRGLSYIHQRY---ILHR 127
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC-DV 875
D+ +N+L+ E ++DFG A+ S +S T Y P++ C D+
Sbjct: 128 DLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDM 187
Query: 876 YSFGVLALEVIKG 888
+ G + +E+I+G
Sbjct: 188 WGVGCIFVEMIQG 200
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 7e-07
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 8/198 (4%)
Query: 697 IGRGGYGSVYKAELPSGDTV-AVKKLHS-FTGETTHQKEFLSEIKAL-TGVRHRNIVKFY 753
IG+G +G V A + + AVK L + +K +SE L V+H +V +
Sbjct: 3 IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
A + V +Y+ G L L E ++ R + +A AL Y+H I
Sbjct: 63 FSFQTADKLYFVLDYINGGELFYHLQRERCF-LEPRARFYAAE-IASALGYLH---SLNI 117
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC 873
V+RD+ +N+LLD + ++DFG K + S GT Y+APE+ +
Sbjct: 118 VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTV 177
Query: 874 DVYSFGVLALEVIKGQHP 891
D + G + E++ G P
Sbjct: 178 DWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 7e-07
Identities = 57/266 (21%), Positives = 106/266 (39%), Gaps = 63/266 (23%)
Query: 687 SINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKL--HSFTGETTHQKEF-----LSEI 738
+ +++ +G G +G VYKA ++ +G VA+KK+ H ++K+ L EI
Sbjct: 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMH-------NEKDGFPITALREI 58
Query: 739 KALTGVRHRNIVK----FYGFCSHARHS----FLVYEYLERGSLARILSSETAT-EMDWS 789
K L ++H N+V ++ ++V Y++ L+ +L + +
Sbjct: 59 KILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQI 117
Query: 790 KRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849
K + + ++Y+H I+HRD+ + N+L+D + ++DFG A+ N
Sbjct: 118 K--CYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNP 172
Query: 850 SELAG-----------TYGYVAPELA-----YTMKVTEKCDVYSFGVLALEVIKG----- 888
G T Y PEL YT V D++ G + E+
Sbjct: 173 KGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAV----DIWGIGCVFAEMFTRRPILQ 228
Query: 889 ------QHPK--DLLSSLSDSSLPGA 906
Q L + ++ + PG
Sbjct: 229 GKSDIDQLHLIFKLCGTPTEETWPGW 254
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 8e-07
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 697 IGRGGYG---SVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKF 752
+G+G YG S AE +TVA+KK+ + + K L E+K L R H+NI
Sbjct: 8 LGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCL 67
Query: 753 YG----FCSHARHSFLVYEYLERGSLARIL-SSETATEMDWSKRVNVIKGVAHALSYMHH 807
Y F + +L YE L L +I+ S + T+ + + I + L Y+H
Sbjct: 68 YDMDIVFPGNFNELYL-YEELMEADLHQIIRSGQPLTDAHFQ---SFIYQILCGLKYIH- 122
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD----SSNWSELAGTYGYVAPEL 863
++HRD+ N+L++ + E + DFG A+ + + +E T Y APE+
Sbjct: 123 --SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEI 180
Query: 864 AYTMK-VTEKCDVYSFGVLALEVIKGQ 889
+ + T+ DV+S G + E++ +
Sbjct: 181 MLSFQSYTKAIDVWSVGCILAELLGRK 207
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 9e-07
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G YGSV A + VAVKKL H + E++ L ++H N++
Sbjct: 23 VGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDV 82
Query: 756 CSHA------RHSFLVYEYLERGSLARILSSETATEMDWSKRVN-VIKGVAHALSYMHHE 808
+ A +LV L L I+ + ++ + V +I + L Y+H
Sbjct: 83 FTPATSIENFNEVYLVTN-LMGADLNNIVKCQKLSD----EHVQFLIYQLLRGLKYIH-- 135
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-M 867
I+HRD+ NV ++ + E + DFG A+ + + + T Y APE+ M
Sbjct: 136 -SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGY---VATRWYRAPEIMLNWM 191
Query: 868 KVTEKCDVYSFGVLALEVIKGQ 889
+ D++S G + E++KG+
Sbjct: 192 HYNQTVDIWSVGCIMAELLKGK 213
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 49/221 (22%), Positives = 93/221 (42%), Gaps = 17/221 (7%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G Y +VYK D + K E + E+ L ++H NIV +
Sbjct: 14 LGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 73
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ LV+EYL++ L + L + ++ + + L+Y H R ++HR
Sbjct: 74 HTEKSLTLVFEYLDK-DLKQYLD-DCGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHR 128
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTMKVTEKCDV 875
D+ +N+L++ E ++DFG A+ + +S T Y P+ L + + + D+
Sbjct: 129 DLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDM 188
Query: 876 YSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916
+ G + E+ G+ PG+ + E + +F
Sbjct: 189 WGVGCIFYEMSTGR-----------PLFPGSTVEEQLHFIF 218
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 1e-06
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY---GYVAPELAYTMKVT 870
VHRD++++NVLL + DFG A+ + D SN+ T+ ++APE + T
Sbjct: 259 VHRDLAARNVLLAQGKIVKICDFGLARDIMHD-SNYVSKGSTFLPVKWMAPESIFDNLYT 317
Query: 871 EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE 930
DV+S+G+L E+ SL + PG +D F ++ + +
Sbjct: 318 TLSDVWSYGILLWEIF----------SLGGTPYPGM----IVDSTFYNKIKSGYRMAKPD 363
Query: 931 DKLKSIIEVALSCVDANPERRPNM----QIVCKLLSG 963
+ + ++ + C ++ PE+RP+ IV LL
Sbjct: 364 HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLPS 400
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 2e-06
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 794 VIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA 853
+ K + L Y+H + I+HRDV ++N+ ++ + + D G A+ + + LA
Sbjct: 162 IEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQ-FPVVAPAFLGLA 217
Query: 854 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894
GT APE+ K K D++S G++ E++ +P +
Sbjct: 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLA--YPSTI 256
|
Length = 357 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN-IVKFYG 754
IG G YG VYKA + +G VA+KK E L EI L + IV+
Sbjct: 9 IGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLD 68
Query: 755 FCSHARHS------FLVYEYLE----------RGSLARILSSETATEMDWSKRVNVIKGV 798
H +LV+EYL+ R L ++T + ++KGV
Sbjct: 69 -VEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMY----QLLKGV 123
Query: 799 AHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA-HVSDFGTAKLLKPDSSNWSELAGTYG 857
AH + ++HRD+ +N+L+D + ++D G + +++ T
Sbjct: 124 AHCHKH-------GVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLW 176
Query: 858 YVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGQ 889
Y APE+ Y+ V D++S G + E+ + Q
Sbjct: 177 YRAPEVLLGSTHYSTPV----DIWSVGCIFAEMSRKQ 209
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 52/244 (21%), Positives = 103/244 (42%), Gaps = 20/244 (8%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G Y +V+K + + K E + E+ L ++H NIV +
Sbjct: 14 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV 73
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ LV+EYL++ L + + + M + + L+Y H R ++HR
Sbjct: 74 HTDKSLTLVFEYLDK-DLKQYMD-DCGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHR 128
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTMKVTEKCDV 875
D+ +N+L++ E ++DFG A+ + +S T Y P+ L + + + + D+
Sbjct: 129 DLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDM 188
Query: 876 YSFGVLALEVIKGQ--HPKD-----------LLSSLSDSSLPGANMNEAI-DHMFDARLP 921
+ G + E+ G+ P LL + ++ + PG + N+ ++ F P
Sbjct: 189 WGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKP 248
Query: 922 PPWL 925
P +
Sbjct: 249 QPLI 252
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 19/222 (8%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G Y +V+K + + VA+K++ E + E+ L ++H NIV +
Sbjct: 13 LGEGTYATVFKGRSKLTENLVALKEIR-LEHEEGAPCTAIREVSLLKNLKHANIVTLHDI 71
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
R LV+EYL+ L + L + M + + LSY H I+H
Sbjct: 72 IHTERCLTLVFEYLD-SDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKR---KILH 126
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTMKVTEKCD 874
RD+ +N+L++ + E ++DFG A+ + +S T Y P+ L + + + D
Sbjct: 127 RDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPID 186
Query: 875 VYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916
++ G + E+ G+ PG+ + E + +F
Sbjct: 187 MWGVGCILYEMATGR-----------PMFPGSTVKEELHLIF 217
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 3e-06
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 689 NNFDESFCIGRGGYGSVYKAELPSGDT-VAVKKLHSFTGETTHQ-KEFLSEIKALTGVRH 746
+F+ I G YG+VY A+KK++ +Q ++ E LT +
Sbjct: 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN 60
Query: 747 RNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH 806
+V + RH +V EY+E G A +L + A +D + R+ + V AL Y+H
Sbjct: 61 PFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMA-RMYFAETVL-ALEYLH 118
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL-LKPDSSNWSE-------------- 851
+ IVHRD+ N+L+ ++DFG +K+ L ++N E
Sbjct: 119 NY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQ 175
Query: 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+ GT Y+APE+ + D ++ G++ E + G P
Sbjct: 176 VCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVP 215
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 3e-06
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 697 IGRGGYGSV---YKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
IG G G V Y A L VA+KKL TH K E+ + V H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILER--NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 754 GFCSHARH------SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
+ + ++V E ++ +L +++ E+D + ++ + + ++H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLH- 143
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
I+HRD+ N+++ + + DFG A+ + Y Y APE+ M
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGM 200
Query: 868 KVTEKCDVYSFGVLALEVIKGQ 889
E D++S G + E+IKG
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGG 222
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 69/296 (23%), Positives = 112/296 (37%), Gaps = 74/296 (25%)
Query: 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSF-------TGETTHQKEFLSEIKAL 741
+F+ IGRG +G V + +G A+K L G +++ L E +L
Sbjct: 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSL 61
Query: 742 TGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILS-----SETATEMDWSKRVNVIK 796
V+ FY F + +L+ E+L G + +L +E T+ ++ V I
Sbjct: 62 WVVK-----MFYSF-QDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAID 115
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP------------ 844
+ H L + +HRD+ N+LLD + +SDFG LK
Sbjct: 116 SI-HQLGF---------IHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNH 165
Query: 845 ---------------DSSNWS----ELA----GTYGYVAPELAYTMKVTEKCDVYSFGVL 881
+ W +LA GT Y+APE+ + CD +S GV+
Sbjct: 166 SLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVI 225
Query: 882 ALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSII 937
E++ G P S P + ++ PP EV + +K K +I
Sbjct: 226 MYEMLIGYPP-------FCSETPQETYKKVMNWKETLIFPP---EVPISEKAKDLI 271
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 3e-06
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 516 QLSELDLSHNLLRGEIPPEIC-NLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNE 574
L LDLS+N L IP L +L+ L+LS NNL+ P F + L S+D+S N
Sbjct: 1 NLKSLDLSNNRLT-VIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 575 L 575
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 4e-06
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 417 NATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSA 476
A L+ SSN L+ +P L+ L SL+ L +G S L L L LDL+
Sbjct: 45 VAVNRLALNLSSNTLL-LLPSSLSRLLSLDLLSPSGIS-SLDGSENLLNLLPLPSLDLNL 102
Query: 477 NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLV-QLSELDLSHNLLRGEIPPEI 535
NR +I + L L L++ +N + +IP +G L L ELDLS N + +P +
Sbjct: 103 NRLRSNIS-ELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPL 159
Query: 536 CNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
NL +L+ L+LS N+LS +P N+ L ++D+S N++
Sbjct: 160 RNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKI 198
|
Length = 394 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 4e-06
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 8/198 (4%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHS-FTGETTHQKEFLSEIKAL-TGVRHRNIVKFY 753
IG+G +G V A+ G AVK L QK ++E L V+H +V +
Sbjct: 3 IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
+ V +++ G L L E + ++ +A AL Y+H I
Sbjct: 63 YSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFY--AAEIASALGYLH---SINI 117
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC 873
V+RD+ +N+LLD + ++DFG K S + GT Y+APE+
Sbjct: 118 VYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTV 177
Query: 874 DVYSFGVLALEVIKGQHP 891
D + G + E++ G P
Sbjct: 178 DWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 5e-06
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 20/200 (10%)
Query: 697 IGRGGYGSV---YKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
IG G G V Y A L VA+KKL TH K E+ + V H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDR--NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 754 GFCSHAR------HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
+ + +LV E ++ +L +++ E+D + ++ + + ++H
Sbjct: 83 NVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLH- 136
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
I+HRD+ N+++ + + DFG A+ S + T Y APE+ M
Sbjct: 137 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 868 KVTEKCDVYSFGVLALEVIK 887
E D++S G + E+++
Sbjct: 194 GYKENVDIWSVGCIMGEMVR 213
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 6e-06
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 746 HRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYM 805
+ N +K Y + + L+ +Y++ G L +L E + ++ +I+ + AL+ +
Sbjct: 68 NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGK--LSEAEVKKIIRQLVEALNDL 125
Query: 806 H-HECRPPIVHRDVSSKNVLLD-FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL 863
H H I+H D+ +NVL D + ++ D+G K++ S GT Y +PE
Sbjct: 126 HKHN----IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSC----YDGTLDYFSPE- 176
Query: 864 AYTMKVT-EKCDVYSF-----GVLALEVIKGQHP 891
K+ D SF GVL E++ G+HP
Sbjct: 177 ----KIKGHNYD-VSFDWWAVGVLTYELLTGKHP 205
|
Length = 267 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 6e-06
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 13 ARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCN 56
LL +K++L + L SW + + PC+W+G++C+
Sbjct: 5 RDALLAFKSSLNGDPSGALSSWN------PSSSDPCSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 6e-06
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 39/218 (17%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY-- 753
+G G G V+ A + VAVKK+ + K L EIK + + H NIVK Y
Sbjct: 13 LGCGSNGLVFSAVDSDCDKRVAVKKI--VLTDPQSVKHALREIKIIRRLDHDNIVKVYEV 70
Query: 754 ------------GFCSHARHSFLVYEYLERGSLARI-----LSSETATEMDWSKRVNVIK 796
G + ++V EY+E LA + LS E A + +++
Sbjct: 71 LGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMY----QLLR 125
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSSN---WSEL 852
G L Y+H ++HRD+ NV ++ E + DFG A+++ P S+ SE
Sbjct: 126 G----LKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEG 178
Query: 853 AGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQ 889
T Y +P L + T+ D+++ G + E++ G+
Sbjct: 179 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 7e-06
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 752 FYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKG-VAHALSYMHHEC 809
Y F + + L+ +Y+ G L + E TE V V + AL ++H
Sbjct: 71 HYAFQTDTK-LHLILDYVNGGELFTHLYQREHFTE----SEVRVYIAEIVLALDHLH--- 122
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS-ELAGTYGYVAPELAYTMK 868
+ I++RD+ +N+LLD E ++DFG +K + + GT Y+APE+
Sbjct: 123 QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGS 182
Query: 869 V--TEKCDVYSFGVLALEVIKGQHP 891
+ D +S GVL E++ G P
Sbjct: 183 GGHDKAVDWWSLGVLTFELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 7e-06
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 22/156 (14%)
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT---YGYVAPELAYTMKVT 870
+HRD++++N+LL + DFG A+ ++ D SN+ ++APE + T
Sbjct: 236 IHRDLAARNILLTHGRITKICDFGLARDIRND-SNYVVKGNARLPVKWMAPESIFNCVYT 294
Query: 871 EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA--RLPPPWLEVG 928
+ DV+S+G+L E+ SL S PG ++ M R+ P
Sbjct: 295 FESDVWSYGILLWEIF----------SLGSSPYPGMPVDSKFYKMIKEGYRMLSP----- 339
Query: 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964
E + ++ SC DA+P +RP + + +L+ Q
Sbjct: 340 -ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 8e-06
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 704 SVYKAELPSGDTVAVKKL-HSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF----CSH 758
S+YK + V ++ G +EIK L + NI+K YGF
Sbjct: 35 SIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDD 93
Query: 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDV 818
L+ EY RG L +L E ++ + ++++ L ++ P ++++
Sbjct: 94 LPRLSLILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNKP--YKNL 149
Query: 819 SSKNVLLDFEYEAHVSDFGTAKLLK-PDSSNWSELAGTYGYVAPELAYTM--KVTEKCDV 875
+S + L+ Y+ + G K+L P N + + Y + ++ + + T K D+
Sbjct: 150 TSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMV----YFSYKMLNDIFSEYTIKDDI 205
Query: 876 YSFGVLALEVIKGQHPKDLLSS 897
YS GV+ E+ G+ P + L++
Sbjct: 206 YSLGVVLWEIFTGKIPFENLTT 227
|
Length = 283 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 9e-06
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 30/163 (18%)
Query: 736 SEIKALTGVRHRNIVKF-YGF------CSHARH-SFLVYEYLERGSLARILSSETATEMD 787
EI L + HR I+ + + C ++ Y++R L E A
Sbjct: 135 REIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSG---PLPLEQA---- 187
Query: 788 WSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL----- 842
+ + + + AL+Y+H I+HRDV ++N+ LD A + DFG A L
Sbjct: 188 ----ITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240
Query: 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 885
P WS GT +PEL K D++S G++ E+
Sbjct: 241 TPQCYGWS---GTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280
|
Length = 392 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 1e-05
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT----YGYVAPELAYTMKV 869
+HRDV+++NVLL A + DFG A+ + D SN+ + G ++APE +
Sbjct: 234 IHRDVAARNVLLTDGRVAKICDFGLARDIMND-SNYV-VKGNARLPVKWMAPESIFDCVY 291
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA--RLPPPWLEV 927
T + DV+S+G+L E+ SL S PG +N M ++ P
Sbjct: 292 TVQSDVWSYGILLWEIF----------SLGKSPYPGILVNSKFYKMVKRGYQMSRP---- 337
Query: 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964
+ I + C + P RP + +L+ Q
Sbjct: 338 --DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 2e-05
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 337 GSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQ 396
G +P + L+ + L N + GNI G +L++ DLSYN F G + +
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 397 LGILKIAGNNITGGIPPEIG 416
L IL + GN+++G +P +G
Sbjct: 492 LRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 2e-05
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 690 NFDESFCIGRGGYGSVYKAELPSG-DTVAVKKLHSFTGETTHQK-----EFLSEIKALTG 743
NF+ +G G YG V+ SG D+ + + T QK +E + L
Sbjct: 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 60
Query: 744 VRHRN--IVKFYGFCSHARHSFLVYEYLERGSLARILSS-ETATEMDWSKRVNVIKG-VA 799
+R + Y F + + L+ +Y+ G L LS E E + V + G +
Sbjct: 61 IRQSPFLVTLHYAFQTDTKLH-LILDYINGGELFTHLSQRERFKEQE----VQIYSGEIV 115
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS-ELAGTYGY 858
AL ++H + I++RD+ +N+LLD ++DFG +K D + GT Y
Sbjct: 116 LALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEY 172
Query: 859 VAPELAYTMKV--TEKCDVYSFGVLALEVIKGQHP 891
+AP++ + D +S GVL E++ G P
Sbjct: 173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG- 754
IG G G V A + +G VA+KKL TH K E+ + V H+NI+
Sbjct: 24 IGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNV 83
Query: 755 FC-----SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
F + +LV E ++ +L +++ ++D + ++ + + ++H
Sbjct: 84 FTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHERMSYLLYQMLCGIKHLHSA- 137
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
I+HRD+ N+++ + + DFG A+ S + T Y APE+ M
Sbjct: 138 --GIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVILGMGY 194
Query: 870 TEKCDVYSFGVLALEVIKGQ 889
E D++S G + E+I+G
Sbjct: 195 KENVDIWSVGCIMGEMIRGT 214
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 3e-05
Identities = 22/60 (36%), Positives = 26/60 (43%)
Query: 204 NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQL 263
NL L L N L +F L L L+LS N L+ P+ L L L LS N L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 3e-05
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 28/208 (13%)
Query: 697 IGRGGYGSVYKAELPSGDTV-AVKKLH-SFTGETTHQKEFLSEIKAL-TGVRHRNIVKFY 753
IG+G +G V A+ + AVK L + QK ++E L V+H +V +
Sbjct: 3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSET----------ATEMDWSKRVNVIKGVAHALS 803
A + V +Y+ G L L E A E +A AL
Sbjct: 63 YSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAE------------IASALG 110
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL 863
Y+H I++RD+ +N+LLD + ++DFG K S S GT Y+APE+
Sbjct: 111 YLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEV 167
Query: 864 AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
D + G + E++ G P
Sbjct: 168 LRKQPYDRTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 3e-05
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 20/214 (9%)
Query: 690 NFDESFCIGRGGYGSVY---KAELP-SGDTVAVKKLH--SFTGETTHQKEFLSEIKALTG 743
NF+ +G G YG V+ K +G A+K L + + + +E L
Sbjct: 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60
Query: 744 VRHRN--IVKFYGFCSHAR-HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG-VA 799
VR + Y F + A+ H L+ +Y+ G + L D V G +
Sbjct: 61 VRQSPFLVTLHYAFQTEAKLH--LILDYVSGGEMFTHLYQRDNFSED---EVRFYSGEII 115
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK-LLKPDSSNWSELAGTYGY 858
AL ++H + IV+RD+ +N+LLD E ++DFG +K L + GT Y
Sbjct: 116 LALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEY 172
Query: 859 VAPELAYTMKVTEKC-DVYSFGVLALEVIKGQHP 891
+APE+ K D +S G+L E++ G P
Sbjct: 173 MAPEIIRGKGGHGKAVDWWSLGILIFELLTGASP 206
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 4e-05
Identities = 47/214 (21%), Positives = 83/214 (38%), Gaps = 34/214 (15%)
Query: 697 IGRGGYGSVYKAELPSGDTV---AVKKLHSFTGETT----------HQKEFLSEIKALTG 743
IG GG+G VY+ + S + AV K+ + ET + + ++ K +
Sbjct: 20 IGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHN 79
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEY--LER--GSLARILSSETATEMDWSKRVNVIKGVA 799
+ H I K+YG C + + Y + LE+ + I K N++K +
Sbjct: 80 IDHLGIPKYYG-CGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIK--NIMKDML 136
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL---------KPDSSNWS 850
L Y+H I H D+ +N+++D ++ D+G A + +
Sbjct: 137 TTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLH 193
Query: 851 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALE 884
GT Y + VT + D+ S G L+
Sbjct: 194 R--GTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225
|
Length = 294 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 4e-05
Identities = 51/165 (30%), Positives = 69/165 (41%), Gaps = 23/165 (13%)
Query: 687 SINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVK---KLHSFTGETTHQKEFLSEIKALT 742
SI F I RG +G VY + + AVK K HQ +E AL
Sbjct: 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQ--VQAERDALA 59
Query: 743 GVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILS------SETATEMDWSKRVNVIK 796
+ IV Y A + +LV EYL G + +L E A V I
Sbjct: 60 LSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMA--------VKYIS 111
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841
VA AL Y+H R I+HRD+ N+L+ E ++DFG +K+
Sbjct: 112 EVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 5e-05
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 31/177 (17%)
Query: 734 FLSEIKALTGVRHRNIVKFYGFCSHARHS-FLVYEYLERGSLARILSSETATEMDWSKRV 792
L E L G+ H+NI+ C F++Y Y+ G+L L E + + +
Sbjct: 55 LLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQAL 114
Query: 793 NVIKGV------AHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP-- 844
+ + V A +SY+H + ++H+D++++N ++D E + ++D ++ L P
Sbjct: 115 STQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMD 171
Query: 845 -----DSSN----WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHP 891
D+ N W +A E + + DV+SFGVL E++ GQ P
Sbjct: 172 YHCLGDNENRPVKW---------MALESLVNKEYSSASDVWSFGVLLWELMTLGQTP 219
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 6e-05
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 42/211 (19%)
Query: 697 IGRGGYGSVY-----KA----ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR 747
+G+G +G+VY KA L + V +L+ ET + E + L+ + H
Sbjct: 8 LGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNP--NETVQANQ---EAQLLSKLDHP 62
Query: 748 NIVKFYG-------------FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNV 794
IVKF+ +C + E G + LS E W + +
Sbjct: 63 AIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTG---KTLSENQVCE--WF--IQL 115
Query: 795 IKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG 854
+ GV YMH I+HRD+ +KN+ L + DFG ++LL + G
Sbjct: 116 LLGV----HYMHQR---RILHRDLKAKNIFLKNNL-LKIGDFGVSRLLMGSCDLATTFTG 167
Query: 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEV 885
T Y++PE K D++S G + E+
Sbjct: 168 TPYYMSPEALKHQGYDSKSDIWSLGCILYEM 198
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 8e-05
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 35/160 (21%)
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMD----WSKRVNVIKGVAHALS 803
N+V + + FLV ++ E G L +S + W+ + V AL
Sbjct: 46 NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVV------ALD 99
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG------ 857
+H E IV RD++ N+LLD ++ F WSE+ +
Sbjct: 100 ALHRE---GIVCRDLNPNNILLDDRGHIQLTYFS----------RWSEVEDSCDGEAVEN 146
Query: 858 -YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ-----HP 891
Y APE+ + TE CD +S G + E++ G+ HP
Sbjct: 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHP 186
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 2e-04
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 228 KLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQ 286
L L+LSNN+L+ IP L L L LS N L P + S L SL L L N
Sbjct: 1 NLKSLDLSNNRLT-VIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 287 L 287
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 2e-04
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 46/214 (21%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLH-------SFTGETTHQKEFLSEIKALTGVRHRN 748
+G G Y +VYK +G VA+K++ FT + E L ++H N
Sbjct: 13 LGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTA--------IREASLLKDLKHAN 64
Query: 749 IVKFYGFCSHARHSF-LVYEYLERGSLARILSSETATEMDWSKRV----NV-------IK 796
IV + H + + LV+EYL+ + MD NV ++
Sbjct: 65 IVTLHDII-HTKKTLTLVFEYLDT---------DLKQYMDDCGGGLSMHNVRLFLFQLLR 114
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY 856
G L+Y H ++HRD+ +N+L+ E ++DFG A+ S +S T
Sbjct: 115 G----LAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTL 167
Query: 857 GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGQ 889
Y P+ L + + + D++ G + E+ G+
Sbjct: 168 WYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGR 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 796 KGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL-LKPDSSNWSELAG 854
+ V A+ Y+H I+HRD+ ++N+ ++ + + DFG A + +++ + AG
Sbjct: 189 RSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAG 245
Query: 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP---KDLLSSLSDS 901
T APEL D++S G++ E+ KD L DS
Sbjct: 246 TIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDS 295
|
Length = 391 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 734 FLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVN 793
F + V H++IV YG C + +V E++E G L + ++ + +
Sbjct: 51 FFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFK 109
Query: 794 VIKGVAHALSYMHHECRPPIVHRDVSSKNVLL 825
V K +A ALSY+ + +VH +V +KN+LL
Sbjct: 110 VAKQLASALSYLEDK---DLVHGNVCTKNILL 138
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 697 IGRGGYGSVYKAEL---PSGDTVAVKKLHSFTGETTHQK-----EFLSEIKALTGVRHRN 748
+G+G + ++YK L D V + S + F ++ + H++
Sbjct: 3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETAT-EMDWSKRVNVIKGVAHALSYMHH 807
+VK YG C + +V EY++ G L L E + W +++V K +A AL Y+
Sbjct: 63 LVKLYGVCVRDENI-MVEEYVKFGPLDVFLHREKNNVSLHW--KLDVAKQLASALHYLED 119
Query: 808 ECRPPIVHRDVSSKNVLL 825
+ +VH +V KN+L+
Sbjct: 120 K---KLVHGNVCGKNILV 134
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 3e-04
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 43/210 (20%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYG 754
IG G + V KA +G A+K + ++ Q L EI+AL + H NI++
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCMKK-HFKSLEQVNNLREIQALRRLSPHPNILRL-- 63
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWS--------------KRV-NVIKGVA 799
L + G LA + MD + KRV + + +
Sbjct: 64 ------IEVLFDR--KTGRLALVFEL-----MDMNLYELIKGRKRPLPEKRVKSYMYQLL 110
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL--KPDSSNWSELAGTYG 857
+L +MH R I HRD+ +N+L+ + ++DFG+ + + KP ++E T
Sbjct: 111 KSLDHMH---RNGIFHRDIKPENILIKDD-ILKLADFGSCRGIYSKPP---YTEYISTRW 163
Query: 858 YVAPELAYTMKV-TEKCDVYSFGVLALEVI 886
Y APE T K D+++ G + E++
Sbjct: 164 YRAPECLLTDGYYGPKMDIWAVGCVFFEIL 193
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 3e-04
Identities = 57/259 (22%), Positives = 93/259 (35%), Gaps = 68/259 (26%)
Query: 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKA----LTGV 744
+F IG+G +G V + DT + + + +K+ L+ +KA L
Sbjct: 1 EDFHTVKVIGKGAFGEVRLVQ--KKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES 58
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILS-----SETATEMDWSKRVNVIKGVA 799
+V Y A++ +L+ E+L G L +L SE T ++ V I+ V
Sbjct: 59 DSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAV- 117
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG------------------TAKL 841
H L + +HRD+ N+L+D +SDFG K
Sbjct: 118 HKLGF---------IHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKS 168
Query: 842 LKPDSSNWSELA-----------------------------GTYGYVAPELAYTMKVTEK 872
K N + +A GT Y+APE+ ++
Sbjct: 169 NKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQE 228
Query: 873 CDVYSFGVLALEVIKGQHP 891
CD +S G + E + G P
Sbjct: 229 CDWWSLGAIMFECLIGWPP 247
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 5e-04
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 313 GFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPN 372
GF+P +I + LQ ++ N G++P +L + TSLE + L N G+I + G +
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 373 LKLFDLSYNKFYGELSS 389
L++ +L+ N G + +
Sbjct: 492 LRILNLNGNSLSGRVPA 508
|
Length = 623 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 5e-04
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 492 KLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPE-ICNLESLEKLNLSHNN 550
L L++S+N + L L LDLS N L I PE L SL L+LS NN
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLT-SISPEAFSGLPSLRSLDLSGNN 59
Query: 551 L 551
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 6e-04
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 734 FLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETA-TEMDWSKRV 792
F ++ V H ++ +G C + +V E++E G L L E + W ++
Sbjct: 63 FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KI 120
Query: 793 NVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL 825
V + +A ALSY+ + +VH +V +KN+LL
Sbjct: 121 TVAQQLASALSYLEDK---NLVHGNVCAKNILL 150
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 7e-04
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 41/257 (15%)
Query: 654 KDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSIN-NFDESFCIGRGGYGSVYKAE-LP 711
+ ++ +E R++ E K++ +I RS N ++ IG G +G VY+A +
Sbjct: 30 MNDKKLDEEERSHNNNAGEDEDEEKMIDNDINRSPNKSYKLGNIIGNGSFGVVYEAICID 89
Query: 712 SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV----KFYGFC--SHARHSFL- 764
+ + VA+KK+ +E L + + H NI+ +Y C + ++ FL
Sbjct: 90 TSEKVAIKKV--LQDPQYKNRELL----IMKNLNHINIIFLKDYYYTECFKKNEKNIFLN 143
Query: 765 -VYEYLERGSLARILSSETATEMDWSKRVN------VIK----GVAHALSYMHHECRPPI 813
V E++ + M R N ++K + AL+Y+H + I
Sbjct: 144 VVMEFIPQ---------TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---I 191
Query: 814 VHRDVSSKNVLLD-FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY-TMKVTE 871
HRD+ +N+L+D + + DFG+AK L + S + + Y APEL T
Sbjct: 192 CHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRF-YRAPELMLGATNYTT 250
Query: 872 KCDVYSFGVLALEVIKG 888
D++S G + E+I G
Sbjct: 251 HIDLWSLGCIIAEMILG 267
|
Length = 440 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 8e-04
Identities = 21/56 (37%), Positives = 25/56 (44%)
Query: 184 LYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQL 239
L L NN L + L NL L L N+L P +F L L L+LS N L
Sbjct: 5 LDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 37.5 bits (88), Expect = 0.001
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHL 215
+LK+L L N L + L +L L L N+L P + L +L L L N+L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 0.001
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY---GYVAPELAYTMKVT 870
VHRD++++NVL+ + DFG A+ + DS N+ T+ ++APE + T
Sbjct: 261 VHRDLAARNVLICEGKLVKICDFGLARDIMRDS-NYISKGSTFLPLKWMAPESIFNNLYT 319
Query: 871 EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910
DV+SFG+L E+ +L + P MNE
Sbjct: 320 TLSDVWSFGILLWEIF----------TLGGTPYPELPMNE 349
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.002
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 697 IGRGGYGSVYKA------ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNI 749
+G G +G V +A + + VAVK L + + T ++ +SE+K L+ + +H+NI
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKA-SAHTDEREALMSELKILSHLGQHKNI 104
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETAT 784
V G C+H ++ EY G L L + T
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAET 139
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.002
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 21/125 (16%)
Query: 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824
+Y YL G+ R L T V + + A+ Y+H E I+HRD+ ++NVL
Sbjct: 246 LYTYL--GARLRPLGLAQVTA--------VARQLLSAIDYIHGE---GIIHRDIKTENVL 292
Query: 825 LDFEYEAHVSDFGTAKLLKPDSSNWSE-----LAGTYGYVAPELAYTMKVTEKCDVYSFG 879
++ + + DFG A + +WS +AGT APE+ T D++S G
Sbjct: 293 VNGPEDICLGDFGAACFAR---GSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAG 349
Query: 880 VLALE 884
++ E
Sbjct: 350 LVIFE 354
|
Length = 461 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.002
Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 47/125 (37%)
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFG---------------TAKLLKPDSSNWS-------- 850
+HRD+ N+L+D + ++DFG + ++ DS ++S
Sbjct: 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182
Query: 851 ------------------------ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 886
L GT Y+APE+ T+ CD +S GV+ E++
Sbjct: 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 242
Query: 887 KGQHP 891
GQ P
Sbjct: 243 VGQPP 247
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 56/243 (23%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKA----LTGVRHRNIVK- 751
IG G +G V DT A+ + + + + +KA L + +VK
Sbjct: 9 IGIGAFGEVCLVR--KVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKL 66
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
+Y F F V +Y+ G + +L E D ++ I + A+ +H +
Sbjct: 67 YYSFQDKDNLYF-VMDYIPGGDMMSLLIRLGIFEEDLARFY--IAELTCAIESVH---KM 120
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFG---------TAKLLKP------DS----SNWSE- 851
+HRD+ N+L+D + ++DFG +K + DS WSE
Sbjct: 121 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEI 180
Query: 852 -----------------------LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG 888
L GT Y+APE+ T+ CD +S GV+ E++ G
Sbjct: 181 DRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 240
Query: 889 QHP 891
Q P
Sbjct: 241 QPP 243
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.004
Identities = 60/294 (20%), Positives = 99/294 (33%), Gaps = 65/294 (22%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTH-QKEFLSEIKALTGVRHRNIVKFYG 754
+G+G G V+ L +G A+K L + K L+E + L + H + Y
Sbjct: 9 LGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYA 68
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR--VNVIK----GVAHALSYMHHE 808
+ LV +Y G L R+L + K V + V AL Y+H
Sbjct: 69 SFQTETYLCLVMDYCPGGELFRLL------QRQPGKCLSEEVARFYAAEVLLALEYLHLL 122
Query: 809 CRPPIVHRDVSSKNVLL---------DFEYEAHVSDFGTAK------------------- 840
IV+RD+ +N+LL DF+
Sbjct: 123 ---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSE 179
Query: 841 -LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899
+ S + GT Y+APE+ D ++ G+L E++ G P
Sbjct: 180 TFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTP-------- 231
Query: 900 DSSLPGANMNEAIDHMF--DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERR 951
G+N +E ++ + P V + +I L +P +R
Sbjct: 232 ---FKGSNRDETFSNILKKEVTFPG---SPPVSSSARDLIRKLL---VKDPSKR 276
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 964 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.98 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.98 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.98 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.98 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.98 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.98 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.98 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.98 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.98 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.98 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.98 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.98 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.98 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.98 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.96 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.96 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.96 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.95 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.95 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.95 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.94 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.94 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.94 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.93 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.93 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.93 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.93 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.91 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.91 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.91 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.91 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.9 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.9 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.89 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.88 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.88 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.88 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.87 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.87 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.86 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.85 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.85 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.84 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.84 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.81 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.8 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.79 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.79 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.79 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.79 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.78 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.78 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.77 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.76 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.75 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.75 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.71 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.71 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.69 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.66 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.66 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.66 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.65 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.65 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.63 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.63 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.57 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.55 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.52 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.51 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.51 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.48 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.48 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.42 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.4 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.37 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.33 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.3 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.28 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.27 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.2 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.18 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.17 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.17 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.15 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.14 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.13 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.13 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.12 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.11 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.1 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.09 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.08 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.04 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.03 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.0 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.98 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.96 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.93 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.93 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.92 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.81 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.8 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.78 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.72 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.72 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.69 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.63 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.62 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.61 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.56 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.55 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.48 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.45 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-116 Score=1109.17 Aligned_cols=909 Identities=34% Similarity=0.549 Sum_probs=770.0
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeE
Q 037111 9 SIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSY 88 (964)
Q Consensus 9 ~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~ 88 (964)
.++|+.||++||+++. +|.+.+++|+.. ++||.|.||+|+..++|+.|+|+++.+.|.++. .+..+++|++
T Consensus 27 ~~~~~~~l~~~~~~~~-~~~~~~~~w~~~-------~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~-~~~~l~~L~~ 97 (968)
T PLN00113 27 HAEELELLLSFKSSIN-DPLKYLSNWNSS-------ADVCLWQGITCNNSSRVVSIDLSGKNISGKISS-AIFRLPYIQT 97 (968)
T ss_pred CHHHHHHHHHHHHhCC-CCcccCCCCCCC-------CCCCcCcceecCCCCcEEEEEecCCCccccCCh-HHhCCCCCCE
Confidence 5689999999999995 577788999642 689999999999889999999999999998754 5778999999
Q ss_pred EeccCCccccCCCcccc-CCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCC
Q 037111 89 LDLNENQLYGNIPSPIG-NLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNH 166 (964)
Q Consensus 89 L~l~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~ 166 (964)
|+|++|+++|.+|..+. .+++|++|+|++|.++|.+|. +.+++|++|+|++|.+++.+|. ++.+++|++|+|++|.
T Consensus 98 L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~ 175 (968)
T PLN00113 98 INLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV 175 (968)
T ss_pred EECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCc
Confidence 99999999999998765 999999999999999998886 5689999999999999988875 8999999999999999
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhh
Q 037111 167 LDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQE 246 (964)
Q Consensus 167 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 246 (964)
+.+.+|..++++++|++|+|++|++++.+|..++++++|++|+|++|++++.+|..++.+++|++|+|++|.+++.+|..
T Consensus 176 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 255 (968)
T PLN00113 176 LVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSS 255 (968)
T ss_pred ccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcce
Q 037111 247 IGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQ 326 (964)
Q Consensus 247 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~ 326 (964)
++++++|++|+|++|++++.+|..+.++++|++|++++|.+.+.+|..+.++++|+.|++++|.+++..|..+..+++|+
T Consensus 256 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~ 335 (968)
T PLN00113 256 LGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQ 335 (968)
T ss_pred HhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccc
Q 037111 327 YFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNN 406 (964)
Q Consensus 327 ~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~ 406 (964)
.|++++|.+.+.+|..+..+++|+.|++++|++++..+..+..+++|+.|++++|++.+..+..+..+++|+.|++++|.
T Consensus 336 ~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~ 415 (968)
T PLN00113 336 VLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNS 415 (968)
T ss_pred EEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCC
Q 037111 407 ITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGN 486 (964)
Q Consensus 407 i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 486 (964)
+++..|..+..++.|+.|++++|.+++.+|..+..+++|+.|+|++|.+.+.+|..+ ..++|+.|+|++|++++..|..
T Consensus 416 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~ 494 (968)
T PLN00113 416 FSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRK 494 (968)
T ss_pred eeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChh
Confidence 999999999999999999999999999999999999999999999999998888766 4589999999999999999999
Q ss_pred cccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccce
Q 037111 487 MGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLL 566 (964)
Q Consensus 487 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 566 (964)
+..+++|+.|+|++|++++.+|..+..+++|+.|+|++|.+++.+|..|.++++|+.|+|++|++++.+|..+..+++|+
T Consensus 495 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 574 (968)
T PLN00113 495 LGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLV 574 (968)
T ss_pred hhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCcccccCCCCccCCCCCcccccCCCCccCCCC--CCccccccccccccCcceeeEEEehHHHHHHHHHHHHHHh
Q 037111 567 SIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVS--GLQPCKALKSYKHVHRKWRTVLFTVLPLLAALALIIGLIG 644 (964)
Q Consensus 567 ~l~ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 644 (964)
.+++++|++.|.+|...+|..+...++.||+.+||... +.++|... .+...... +++.+++++++++++++
T Consensus 575 ~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~ 647 (968)
T PLN00113 575 QVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV------RKTPSWWF-YITCTLGAFLVLALVAF 647 (968)
T ss_pred EEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc------cccceeee-ehhHHHHHHHHHHHHHH
Confidence 99999999999999988999999999999999998642 34455321 11111112 22222222222222222
Q ss_pred heeeeeccccchhhhhhhccccchhhhhh-ccCCcccHHHHHHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEec
Q 037111 645 MFVCSQRRKKDSQEQEENNRNNQALLSIL-TYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLH 722 (964)
Q Consensus 645 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~ 722 (964)
++++++++++.+.+..+......+..... .......+++ ....|+..+.||+|+||.||+|+. .++..||||++.
T Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~ 724 (968)
T PLN00113 648 GFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIND---ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEIN 724 (968)
T ss_pred HHHHHHhhhcccccccccccccccccccccccchhhhHHH---HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEcc
Confidence 22222222221111111111000000000 0011122333 345678888999999999999976 578999999986
Q ss_pred cccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 037111 723 SFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHAL 802 (964)
Q Consensus 723 ~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l 802 (964)
..... ..+|++.+++++|||||+++|+|.+++..++||||+++|+|.++++ .++|.++.+++.|+++|+
T Consensus 725 ~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L 793 (968)
T PLN00113 725 DVNSI------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKAL 793 (968)
T ss_pred CCccc------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHH
Confidence 43221 1246888999999999999999999999999999999999999994 278999999999999999
Q ss_pred HHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHH
Q 037111 803 SYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLA 882 (964)
Q Consensus 803 ~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll 882 (964)
+|||+.+.++|+||||||+||+++.++.+++. ||.+...... ....+++.|+|||++.+..++.++|||||||++
T Consensus 794 ~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl 868 (968)
T PLN00113 794 RFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVAPETRETKDITEKSDIYGFGLIL 868 (968)
T ss_pred HHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC----CCccccccccCcccccCCCCCcccchhhHHHHH
Confidence 99997666699999999999999999988876 6655432211 223678999999999999999999999999999
Q ss_pred HHHHhCCCCCCccccccCCCCCCCChhHHH---------HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCC
Q 037111 883 LEVIKGQHPKDLLSSLSDSSLPGANMNEAI---------DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN 953 (964)
Q Consensus 883 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs 953 (964)
|||+||+.||+...... ....++. ....++.+... .....+...++.+++.+||+.||++||+
T Consensus 869 ~el~tg~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPt 940 (968)
T PLN00113 869 IELLTGKSPADAEFGVH------GSIVEWARYCYSDCHLDMWIDPSIRGD--VSVNQNEIVEVMNLALHCTATDPTARPC 940 (968)
T ss_pred HHHHhCCCCCCcccCCC------CcHHHHHHHhcCccchhheeCccccCC--CCccHHHHHHHHHHHHhhCcCCchhCcC
Confidence 99999999985322211 1111111 11222222211 1123456677889999999999999999
Q ss_pred HHHHHHHhcC
Q 037111 954 MQIVCKLLSG 963 (964)
Q Consensus 954 ~~evl~~L~~ 963 (964)
|+||++.|+.
T Consensus 941 ~~evl~~L~~ 950 (968)
T PLN00113 941 ANDVLKTLES 950 (968)
T ss_pred HHHHHHHHHH
Confidence 9999999864
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-63 Score=628.06 Aligned_cols=515 Identities=36% Similarity=0.555 Sum_probs=490.0
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccC-CCCcccEEEccccccCCcccccCCCCCCCEEEc
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIG-LLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 162 (964)
.+++.|||++|+++|.+|..|..+++|++|+|++|+++|.+|..+. .+++|++|+|++|.+++.+|. +.+++|++|+|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~-~~l~~L~~L~L 147 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR-GSIPNLETLDL 147 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc-cccCCCCEEEC
Confidence 4789999999999999999999999999999999999999998865 999999999999999998885 67899999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 163 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
++|.+++.+|..++++++|++|+|++|.+.+.+|..++++++|++|+|++|.+++.+|..++.+++|++|+|++|++++.
T Consensus 148 s~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 227 (968)
T PLN00113 148 SNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGE 227 (968)
T ss_pred cCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccC
Q 037111 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS 322 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 322 (964)
+|..++.+++|++|++++|++++.+|..+.++++|++|++++|++.+.+|..+.++++|+.|++++|.+++.+|..+..+
T Consensus 228 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l 307 (968)
T PLN00113 228 IPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQL 307 (968)
T ss_pred CChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEee
Q 037111 323 GSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKI 402 (964)
Q Consensus 323 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L 402 (964)
++|++|++++|.+.+..|..+..+++|+.|++++|.+++..+..++.+++|+.|++++|++.+..+..+..+++|+.|++
T Consensus 308 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l 387 (968)
T PLN00113 308 QNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLIL 387 (968)
T ss_pred CCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccc
Q 037111 403 AGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKS 482 (964)
Q Consensus 403 ~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 482 (964)
++|.+.+..|..+..+++|+.|++++|++++..|..|..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++.+.
T Consensus 388 ~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~ 467 (968)
T PLN00113 388 FSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGG 467 (968)
T ss_pred cCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCccccccccc
Q 037111 483 IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENM 562 (964)
Q Consensus 483 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 562 (964)
.|..+ ..++|+.|++++|++++..|..+..+++|+.|+|++|++++.+|..+.++++|+.|+|++|.+++.+|..|..+
T Consensus 468 ~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 546 (968)
T PLN00113 468 LPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEM 546 (968)
T ss_pred cCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCc
Confidence 88766 45899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCcccccCCCC-ccCCCCCcccccCCCCcc
Q 037111 563 HGLLSIDISYNELDGPIPSI-EAFRHAPVEALQGNKGLC 600 (964)
Q Consensus 563 ~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c 600 (964)
++|+.|||++|+++|.+|.. ..+..+....+.+|+..+
T Consensus 547 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 547 PVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred ccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 99999999999999998863 234445555677777654
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-47 Score=419.89 Aligned_cols=282 Identities=42% Similarity=0.726 Sum_probs=233.1
Q ss_pred CCcccHHHHHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEee
Q 037111 676 EGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755 (964)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 755 (964)
...++++++..++++|...+.||+|+||.||+|..++|+.||||++....... .++|..|+.++.+++|||+|+++||
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 44589999999999999999999999999999999999999999886543322 4669999999999999999999999
Q ss_pred eecCc-eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 756 CSHAR-HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 756 ~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
|.+.+ +.++|||||++|+|.++++.....+++|.+|.+||.++|+||+|||+.+.++||||||||+|||+|+++++||+
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 99988 59999999999999999987554378999999999999999999999988899999999999999999999999
Q ss_pred ccCcccccCCCCCCcccc-ccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCCh----h
Q 037111 835 DFGTAKLLKPDSSNWSEL-AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANM----N 909 (964)
Q Consensus 835 Dfg~a~~~~~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~----~ 909 (964)
|||+|+............ .||.+|+|||++..+..+.++|||||||++.|++||+.|.+............+.. +
T Consensus 220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred CccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 999996654312222222 89999999999999999999999999999999999999877544221111111100 1
Q ss_pred HHHHhhhccCCCCCccccch-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 910 EAIDHMFDARLPPPWLEVGV-EDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+.+++++++.. .... .....++.+++.+|++.+|.+||+|.||++.|+
T Consensus 300 ~~~~eiiD~~l~~---~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 300 GKLREIVDPRLKE---GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred cchhheeCCCccC---CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 1344445555442 1112 267788999999999999999999999999985
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-45 Score=376.26 Aligned_cols=253 Identities=25% Similarity=0.391 Sum_probs=216.7
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-eeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-HSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 766 (964)
.+.+....||+|..|+||+++++ +++.+|+|++.. ..+...++++.+|+++++..+||+||++||+|.... ...++|
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 45666788999999999999765 788899999943 456667789999999999999999999999999998 599999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||++|||++++... +++++...-+++.++++||.|||+ + +||||||||+|||++..|+|||||||.+......
T Consensus 158 EYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred hhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 999999999999765 448999999999999999999996 5 9999999999999999999999999999876544
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
...+.+||..|||||.+.+..|+.++||||||+.++|+++|+.||.... .+....-+.+..++.+..|....
T Consensus 233 --~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~------~~~~~~~~Ll~~Iv~~ppP~lP~ 304 (364)
T KOG0581|consen 233 --IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN------PPYLDIFELLCAIVDEPPPRLPE 304 (364)
T ss_pred --hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC------CCCCCHHHHHHHHhcCCCCCCCc
Confidence 4567899999999999999999999999999999999999999975431 12334557777777765553211
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+..++..++..|+++||.+||+++|+++
T Consensus 305 ----~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 305 ----GEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ----ccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 136667888888999999999999999874
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-45 Score=394.51 Aligned_cols=255 Identities=30% Similarity=0.523 Sum_probs=212.6
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-eeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-HSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 768 (964)
++...+.+|+|+||+||+|.+.....||||++..........+.|.+|+.++.+++|||||+++|+|.+.. ..++||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 44455669999999999999974444999999865544444789999999999999999999999999887 79999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEeccCCCCCeEECCCC-ceEEeccCcccccCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP-IVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~ 846 (964)
|++|+|.++++......+++..+.++|.|||+|+.|||++ + ||||||||+|||++.++ ++||+|||+++......
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 9999999999875556799999999999999999999999 7 99999999999999997 99999999998776543
Q ss_pred CCccccccccccccccccc--cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 847 SNWSELAGTYGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~--~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
...+...||+.|||||++. ...|+.++||||||+++|||+||+.||..... .+....+......++.
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-----------~~~~~~v~~~~~Rp~~ 267 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-----------VQVASAVVVGGLRPPI 267 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHHhcCCCCCC
Confidence 3334468999999999999 56899999999999999999999999864332 2233333322222221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...++..+..++.+||+.||+.||++.+++..|+
T Consensus 268 ----p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 268 ----PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred ----CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 1226677888999999999999999999999886
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-45 Score=394.73 Aligned_cols=250 Identities=29% Similarity=0.523 Sum_probs=216.2
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
.++..+.||+|.||.||.|.+.....||+|.++.. ......|.+|+++|++++|++||+++|+|..++.+|+|||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~---~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m 283 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG---SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYM 283 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc---ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEec
Confidence 35567789999999999999987779999999753 333478899999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 849 (964)
+.|+|.+|++...+..+...+.+.++.|||+|++||+++ ++|||||.++|||++++..+||+|||+|+...++.+..
T Consensus 284 ~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~ 360 (468)
T KOG0197|consen 284 PKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA 360 (468)
T ss_pred ccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence 999999999986777799999999999999999999999 99999999999999999999999999999665554433
Q ss_pred c-ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhc-cCCCCCccc
Q 037111 850 S-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFD-ARLPPPWLE 926 (964)
Q Consensus 850 ~-~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 926 (964)
+ ...-+..|.|||++..+.|+.+||||||||+||||+| |+.|+ ++....+.++.+-. .++|.|
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py-----------~~msn~ev~~~le~GyRlp~P--- 426 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPY-----------PGMSNEEVLELLERGYRLPRP--- 426 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCC-----------CCCCHHHHHHHHhccCcCCCC---
Confidence 2 2234668999999999999999999999999999998 88884 45555566666543 455544
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..|+..+.++|..||+.+|++|||++.+...|+
T Consensus 427 ---~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 427 ---EGCPDEVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred ---CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 468888999999999999999999998887764
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=360.27 Aligned_cols=256 Identities=25% Similarity=0.371 Sum_probs=219.5
Q ss_pred hhcccccceeecCCceeEEEE-EeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEe-eeecCce-eEE
Q 037111 688 INNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG-FCSHARH-SFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~l 764 (964)
..+|++.++||+|.||+||++ +..+|..||.|.++-...+....+....|+.++++++|||||++++ .|.++.. +++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 456888999999999999999 5678999999999855566777788999999999999999999999 4555544 899
Q ss_pred EEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCC-CeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 765 VYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRP-PIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
|||||.+|+|...++. .....+++..+++++.|++.||.++|+..++ .|+||||||.||+++.+|.||++|||++++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 9999999999999975 4556799999999999999999999995432 488999999999999999999999999999
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
+..........+|||.||+||.+.+.+|+++|||||+||++|||+.-++||. +...-+...++-.+..+
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~-----------g~n~~~L~~KI~qgd~~ 246 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFY-----------GDNLLSLCKKIEQGDYP 246 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcc-----------cccHHHHHHHHHcCCCC
Confidence 9877777778899999999999999999999999999999999999999975 33445666777777666
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVC 958 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl 958 (964)
+-+ ......++.+++..|+.+||+.||+.-.++
T Consensus 247 ~~p----~~~YS~~l~~li~~ci~vd~~~RP~t~~~v 279 (375)
T KOG0591|consen 247 PLP----DEHYSTDLRELINMCIAVDPEQRPDTVPYV 279 (375)
T ss_pred CCc----HHHhhhHHHHHHHHHccCCcccCCCcchHH
Confidence 432 245567788999999999999999843333
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-44 Score=387.13 Aligned_cols=249 Identities=24% Similarity=0.454 Sum_probs=218.5
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.+|...+.||+|+|+.||.++. .+|+.||+|++.+.. ........+.+||++.++++|||||+++++|++.+.+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4699999999999999999976 789999999997642 23444567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
|+|+.|+|..+++ ...++++.+++.++.||+.|+.|||++ +|+|||||..|+|++++.+|||+|||+|.....++
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 9999999999997 445699999999999999999999999 99999999999999999999999999999999887
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
....+.+|||.|+|||++....++..+||||+||++|.|++|++||+. ...++...++.......|
T Consensus 173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet-----------k~vkety~~Ik~~~Y~~P--- 238 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET-----------KTVKETYNKIKLNEYSMP--- 238 (592)
T ss_pred cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc-----------chHHHHHHHHHhcCcccc---
Confidence 777889999999999999999999999999999999999999999863 334556666554444333
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+..++|.++|++||.+|||+++|+.
T Consensus 239 ---~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 239 ---SHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ---cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 133445667888999999999999999985
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=369.85 Aligned_cols=254 Identities=25% Similarity=0.384 Sum_probs=210.6
Q ss_pred hhcccccceeecCCceeEEEE-EeCCCCeEEEEEeccccCc-----hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGE-----TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.+.|.+.+.||+|+||.|-+| ..++|+.||||++.+.... ......+.+|+++|++++|||||+++++|...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 346888899999999999999 4568999999999754221 1223456799999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC---CceEEeccCc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE---YEAHVSDFGT 838 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~ 838 (964)
.|+|||||+||+|.+++-..+. +.+...+.+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||+
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~--l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKY--LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred eEEEEEEecCccHHHHHHhccc--cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccch
Confidence 9999999999999999976655 56667788999999999999999 99999999999999766 6799999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCC---CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKV---TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~---~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
|+..+ ......+.+|||.|.|||++.+..+ ..++|+||+||++|-+++|.+||..... .....+.+
T Consensus 326 AK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~----------~~sl~eQI 394 (475)
T KOG0615|consen 326 AKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT----------DPSLKEQI 394 (475)
T ss_pred hhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC----------CccHHHHH
Confidence 99876 4556678899999999999987653 3478999999999999999999863222 11244555
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+++.-. +..+....++...+|.+|+..||++|||++|+++
T Consensus 395 ~~G~y~f~--p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 395 LKGRYAFG--PLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred hcCccccc--ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 56665522 2345667778889999999999999999999875
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-48 Score=393.89 Aligned_cols=478 Identities=31% Similarity=0.444 Sum_probs=402.2
Q ss_pred CcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEc
Q 037111 83 FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162 (964)
Q Consensus 83 ~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 162 (964)
-..++.|++++|.++ .+-+.+.+|..|.+|++++|.++ ..|.+++.+..++.|+.++|+++..+++++.+.+|+.|+.
T Consensus 44 qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 44 QVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDC 121 (565)
T ss_pred hcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhc
Confidence 346788999999998 45667899999999999999999 8999999999999999999999999889999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 163 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
++|.+. .+|++++.+..|+.|+..+|+++ ..|..++++.+|..|++.+|+++...|..+. ++.|++||...|-++ .
T Consensus 122 s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 122 SSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-T 197 (565)
T ss_pred ccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-c
Confidence 999999 78899999999999999999999 7888999999999999999999977666665 999999999999998 7
Q ss_pred ChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccc-cCccccEEEeeCccCcccCCccccc
Q 037111 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIG-NFMNLNSLSVGGNQFTGFLPQNICQ 321 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~ 321 (964)
+|+.++.+.+|..|+|.+|+|. .+| .|.+++.|.+|+++.|+|+ .+|.+.. .+.++..|||..|+++ ..|+.+|.
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl 273 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL 273 (565)
T ss_pred CChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHH
Confidence 8899999999999999999998 677 7999999999999999998 6666655 8999999999999999 46889999
Q ss_pred CCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccC-----CCCCCcEE----EccCCeecc-------
Q 037111 322 SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFG-----IYPNLKLF----DLSYNKFYG------- 385 (964)
Q Consensus 322 ~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L----~Ls~N~i~~------- 385 (964)
+++|.+||+++|.+++ +|.+++++ .|+.|.+.+|.+..+-.+... .+..|+.- .+|.-.=..
T Consensus 274 LrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~ 351 (565)
T KOG0472|consen 274 LRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLP 351 (565)
T ss_pred hhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCC
Confidence 9999999999999875 67789999 999999999998664333221 12222220 111110000
Q ss_pred -ccCccccCCCccceEeecccccCCCCCCCCccccc---CcEEeccCCcccccCCccccccCCcce-eecccccccCCCc
Q 037111 386 -ELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQ---LHELDFSSNHLVGKVPLELANLTSLND-LILNGNQLSGGIP 460 (964)
Q Consensus 386 -~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~---L~~L~Ls~N~l~~~~~~~l~~l~~L~~-L~L~~N~l~~~~~ 460 (964)
.........-..++|++++-+++. +|.+.....+ .+..+++.|++. .+|..+..++.+.+ +.+++|.++ .+|
T Consensus 352 ~~~~~~~~~~i~tkiL~~s~~qlt~-VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~ 428 (565)
T KOG0472|consen 352 SESFPDIYAIITTKILDVSDKQLTL-VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVP 428 (565)
T ss_pred CCcccchhhhhhhhhhccccccccc-CCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cch
Confidence 011122234568899999999984 4554433333 789999999997 78988888876654 455555554 889
Q ss_pred hhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccc
Q 037111 461 PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLES 540 (964)
Q Consensus 461 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 540 (964)
..+..+++|..|+|++|.+. .+|..++.+..|+.||+|.|++. ..|..+-.+..|+.+-.++|++....|..+.++.+
T Consensus 429 ~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~n 506 (565)
T KOG0472|consen 429 LELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRN 506 (565)
T ss_pred HHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhh
Confidence 99999999999999999997 68889999999999999999996 78998888899999999999999777777999999
Q ss_pred cceeeccCCcCCCcccccccccccceEEEecCCccccc
Q 037111 541 LEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGP 578 (964)
Q Consensus 541 L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~ 578 (964)
|.+|||.+|.|. .+|..+++|++|+.|++++|+++-+
T Consensus 507 L~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr~P 543 (565)
T KOG0472|consen 507 LTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFRQP 543 (565)
T ss_pred cceeccCCCchh-hCChhhccccceeEEEecCCccCCC
Confidence 999999999998 7999999999999999999999943
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=365.62 Aligned_cols=202 Identities=29% Similarity=0.495 Sum_probs=183.3
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
...+|...+.||+|+||+||+|+++ ++.+||||.+.........++.+..|+.+++.++|||||++++++..++..|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 3467888999999999999999765 688999999987655666778889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC------CceEEeccCcc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE------YEAHVSDFGTA 839 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~------~~~kl~Dfg~a 839 (964)
||||.||||.+|++..+ .+++..++.++.|+|.|+++||++ +||||||||+|||++.. -.+||+|||+|
T Consensus 88 MEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999999997665 489999999999999999999999 99999999999999875 45899999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
+...+. ....+.+|+|-|||||++..+.|+.|+|+||+|+++|||++|+.||+.
T Consensus 163 R~L~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 163 RFLQPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhCCch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 988744 334677999999999999999999999999999999999999999873
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=348.45 Aligned_cols=266 Identities=22% Similarity=0.375 Sum_probs=213.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
+.|+...++|+|+||+||+++.+ +|+.||||++.....++...+-.++|++++++++|||+|.++++|...+.+++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 56888899999999999999876 69999999998877777777888999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||+. ++.+-+.... ..++...+.++++|++.|+.|+|++ ++|||||||+|||++.+|.+|+||||+|+....++.
T Consensus 82 ~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred ecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence 9988 6666565443 3488899999999999999999999 999999999999999999999999999999987777
Q ss_pred Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChh---HHHHhh-------h
Q 037111 848 NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN---EAIDHM-------F 916 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~-------~ 916 (964)
.++..+.|..|.|||.+.+ .+|..++||||+||++.||++|.+-|-..++............ -.-..+ .
T Consensus 157 ~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~ 236 (396)
T KOG0593|consen 157 NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFH 236 (396)
T ss_pred hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCcee
Confidence 7888899999999999987 7899999999999999999999988643333211000000000 000001 1
Q ss_pred ccCCCCCc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 DARLPPPW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.-++|.+. .+........-+++++..|++.||++|++.++++.
T Consensus 237 Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 237 GVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11223221 12223344456789999999999999999998863
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=397.41 Aligned_cols=255 Identities=26% Similarity=0.455 Sum_probs=219.0
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+....+.||+|+||+||+|+.. +...||||.+++. .+.+.+.+|.+|+++++.++|||||+++|.|.+++..
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 45566778999999999999653 4557999999864 3444678999999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc
Q 037111 763 FLVYEYLERGSLARILSSET------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE 830 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~ 830 (964)
++|+|||..|||.+||.... ..+++..+.+.||.|||.|++||.++ .+|||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceE
Confidence 99999999999999996421 22378899999999999999999999 8999999999999999999
Q ss_pred eEEeccCcccccCCCCCCc-c-ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCC
Q 037111 831 AHVSDFGTAKLLKPDSSNW-S-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGAN 907 (964)
Q Consensus 831 ~kl~Dfg~a~~~~~~~~~~-~-~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~ 907 (964)
|||+|||+++.....++.. . ...-+.+|||||.+..++|+.+||||||||+|||+++ |+.||. +..
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~-----------glS 710 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY-----------GLS 710 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccc-----------ccc
Confidence 9999999999776554432 2 2344679999999999999999999999999999997 999964 344
Q ss_pred hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 908 MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.++.++.+..+++-+ .++.++.+++++|.+||+..|.+||+++||-..|++
T Consensus 711 n~EVIe~i~~g~lL~-----~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~ 761 (774)
T KOG1026|consen 711 NQEVIECIRAGQLLS-----CPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQA 761 (774)
T ss_pred hHHHHHHHHcCCccc-----CCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHH
Confidence 467888887777633 356889999999999999999999999999998863
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-43 Score=358.57 Aligned_cols=245 Identities=24% Similarity=0.385 Sum_probs=211.9
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
..++|+..++||+|+||+||.++.+ +++.||+|++++.. ......+...+|..++.+++||.||+++-.|++.+.+|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 3568999999999999999999654 68899999997653 233456788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|+||+.||.|..++++++. +++..++.++.+|+.||.|||+. +|||||+||+|||+|.+|+++|+|||+++....
T Consensus 103 Vld~~~GGeLf~hL~~eg~--F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGR--FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEeccCCccHHHHHHhcCC--cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 9999999999999976554 88999999999999999999999 999999999999999999999999999997666
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.+....+.+||+.|||||++.+.+|+.++|.||+|+++|||++|.+||. ..+..+..+.+...+.+.+.
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~-----------~~~~~~~~~~I~~~k~~~~p 246 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFY-----------AEDVKKMYDKILKGKLPLPP 246 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCc-----------CccHHHHHHHHhcCcCCCCC
Confidence 6666677899999999999999999999999999999999999999975 34456777777777744221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRP 952 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RP 952 (964)
.-...+..+++.+.+..||++|.
T Consensus 247 -----~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 247 -----GYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -----ccCCHHHHHHHHHHhccCHHHhc
Confidence 11223456777799999999996
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=387.62 Aligned_cols=269 Identities=29% Similarity=0.524 Sum_probs=227.0
Q ss_pred hhccCCcccHHHHHHHhhcc---------cccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHH
Q 037111 672 ILTYEGKLVYEEIIRSINNF---------DESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEI 738 (964)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~---------~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~ 738 (964)
.-++....+|++.-++...| .+.++||.|.||.||+|+++ ....||||.++. ...+..+.+|+.|+
T Consensus 603 ~k~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~-GytekqrrdFL~EA 681 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKA-GYTEKQRRDFLSEA 681 (996)
T ss_pred ceeecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeecc-CccHHHHhhhhhhh
Confidence 34556677777666665544 55678999999999999875 234699999985 33455668999999
Q ss_pred HHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccC
Q 037111 739 KALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDV 818 (964)
Q Consensus 739 ~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dl 818 (964)
.+|.+++||||+++.|+....+.+++|+|||++|+|+.||+.+.++ +.+.++..|.++||.|+.||.++ ++|||||
T Consensus 682 sIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm---~YVHRDL 757 (996)
T KOG0196|consen 682 SIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDM---NYVHRDL 757 (996)
T ss_pred hhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhc---Cchhhhh
Confidence 9999999999999999999999999999999999999999887755 99999999999999999999999 9999999
Q ss_pred CCCCeEECCCCceEEeccCcccccCCCCC-Ccccccc--ccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCc
Q 037111 819 SSKNVLLDFEYEAHVSDFGTAKLLKPDSS-NWSELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDL 894 (964)
Q Consensus 819 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~g--~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~ 894 (964)
.++|||++.+..+||+|||+++...++.. .++...| +.+|.|||.+..+.++.+|||||||++|||.++ |..||..
T Consensus 758 AARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd 837 (996)
T KOG0196|consen 758 AARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 837 (996)
T ss_pred hhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc
Confidence 99999999999999999999998866542 2333333 568999999999999999999999999999885 9999764
Q ss_pred cccccCCCCCCCChhHHHHhh-hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 895 LSSLSDSSLPGANMNEAIDHM-FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.. .++.+..+ .+.++|+| .+|+..+.+||+.||++|-.+||.+.+|+..|.
T Consensus 838 mS-----------NQdVIkaIe~gyRLPpP------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lD 889 (996)
T KOG0196|consen 838 MS-----------NQDVIKAIEQGYRLPPP------MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLD 889 (996)
T ss_pred cc-----------hHHHHHHHHhccCCCCC------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 33 23444444 34567766 478899999999999999999999999998873
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=357.69 Aligned_cols=252 Identities=26% Similarity=0.377 Sum_probs=209.9
Q ss_pred HHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccc-cCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCcee
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSF-TGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 762 (964)
+..++|..++.||+|+|++||+|+. .+++.||||++.+. -..+...+.+..|-..|.++ .||.|++++-.|+++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3456899999999999999999954 57899999998643 22334456778899999999 799999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+|+||+++|+|.++|++.+ .+++...+.++.+|+.||+|||++ |||||||||+|||+|+||++||+|||.|+.+
T Consensus 150 YFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred EEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccC
Confidence 99999999999999997654 489999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCC-------------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChh
Q 037111 843 KPDSSN-------------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN 909 (964)
Q Consensus 843 ~~~~~~-------------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~ 909 (964)
.+.... ...++||..|.+||++.....++++|+|+|||++|+|+.|++||... +.-
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~-----------Ney 293 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA-----------NEY 293 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc-----------cHH
Confidence 643221 13478999999999999999999999999999999999999998532 223
Q ss_pred HHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 910 EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
-..++++.-.+.-+ +..++...+|+.+.+..||.+|+|+++|.+
T Consensus 294 liFqkI~~l~y~fp------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 294 LIFQKIQALDYEFP------EGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHHHHHhcccCC------CCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 44555544333321 122345677888999999999999998865
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=368.95 Aligned_cols=395 Identities=24% Similarity=0.252 Sum_probs=302.3
Q ss_pred CEEEcCCCCCCCCCCCCCCCC--CCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecc
Q 037111 158 KNLALDGNHLDGPIPVSIGNL--SSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235 (964)
Q Consensus 158 ~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 235 (964)
+.||.+++.+...--..+... +.-++|++++|+++...+..|.++++|+.+++.+|.++ .+|..-....+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeee
Confidence 567788887764322222211 22345777777777666666777777777777777776 455554555557777777
Q ss_pred ccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccC
Q 037111 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFL 315 (964)
Q Consensus 236 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 315 (964)
+|.|+..-.+.+..++.|+.||||.|.|+...-.+|..-.++++|+|++|+|+..-...|..+.+|..|.|++|+++
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit--- 210 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT--- 210 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc---
Confidence 77776666666666666666666666666333344555555666666666665544455555555555555555554
Q ss_pred CcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCC
Q 037111 316 PQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCP 395 (964)
Q Consensus 316 p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~ 395 (964)
...+..|+++++|+.|+|..|+|.....-.|..+++|+.|.|..|+|+......|+.+.
T Consensus 211 ---------------------tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~ 269 (873)
T KOG4194|consen 211 ---------------------TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLE 269 (873)
T ss_pred ---------------------ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeec
Confidence 45556677777777888888887776677788888888888888888888888888888
Q ss_pred ccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecc
Q 037111 396 QLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLS 475 (964)
Q Consensus 396 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 475 (964)
++++|+|..|++...-..++-+++.|+.||||.|.|..+.++.+....+|+.|+|++|+|+...+..|..+..|+.|+|+
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs 349 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLS 349 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccc
Confidence 88888888888888888889999999999999999998888888888999999999999998888999999999999999
Q ss_pred cCccccccCCCcccccccceecCCccccCccc---hhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCC
Q 037111 476 ANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEI---PIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 476 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~---~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
+|+++......|.++.+|+.|||++|.|+..+ ...|..|++|+.|+|.+|+|..+...+|.++++|+.|||.+|.|.
T Consensus 350 ~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Naia 429 (873)
T KOG4194|consen 350 HNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIA 429 (873)
T ss_pred ccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcce
Confidence 99999888888999999999999999997654 456888999999999999999777788999999999999999999
Q ss_pred CcccccccccccceEEEecCCccccc
Q 037111 553 GSIPTNFENMHGLLSIDISYNELDGP 578 (964)
Q Consensus 553 ~~~~~~~~~l~~L~~l~ls~N~l~~~ 578 (964)
.+.|++|..| .|++|-++.-.+-|.
T Consensus 430 SIq~nAFe~m-~Lk~Lv~nSssflCD 454 (873)
T KOG4194|consen 430 SIQPNAFEPM-ELKELVMNSSSFLCD 454 (873)
T ss_pred eecccccccc-hhhhhhhcccceEEe
Confidence 9999999999 899998877666554
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=356.61 Aligned_cols=248 Identities=24% Similarity=0.385 Sum_probs=218.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|...+.||+|.||+||+|+.+ +.+.||+|.+.+....+...+.+.+|++++++++||||+.++++|+...++|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46778888999999999999655 67889999998766666677889999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+.| +|..++...+. ++++.+..++++++.||.|||+. +|+|||+||+||+++..+.+|++|||+|+.+.....
T Consensus 82 ~a~g-~L~~il~~d~~--lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK--LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred hhhh-hHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccCce
Confidence 9987 99999965544 89999999999999999999999 999999999999999999999999999999887766
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
..+...|||-|||||...+++|+..+|+||+||++|||++|++||.. ....+.+..+.....+++.
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----------~si~~Lv~~I~~d~v~~p~--- 221 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----------RSITQLVKSILKDPVKPPS--- 221 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-----------HHHHHHHHHHhcCCCCCcc---
Confidence 66778899999999999999999999999999999999999999852 2233566666666665542
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+..++...+.+||..|.+-.+++.
T Consensus 222 ---~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 222 ---TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ---cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 45566788888999999999999888753
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=341.02 Aligned_cols=256 Identities=23% Similarity=0.383 Sum_probs=211.7
Q ss_pred hcccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
..|+....||.|..++||+|+ .+.++.||||++.-...... ...+.+|+..|+.++||||++++..|..+..+|+||+
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 579999999999999999994 56789999999975433333 6789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||.+||+.+.++..-...+++..+..|.+++++||.|||.+ |.||||||+.|||++.+|.|||+|||.+..+...+.
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999887777799999999999999999999999 999999999999999999999999998876665543
Q ss_pred Cc----ccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 848 NW----SELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 848 ~~----~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.. ...+|++.|||||++.. .+|+.|+||||||++..|+.+|+.||....+ + +.+-..+....|
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP----------m-kvLl~tLqn~pp 250 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP----------M-KVLLLTLQNDPP 250 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh----------H-HHHHHHhcCCCC
Confidence 32 45689999999999653 4699999999999999999999999865443 1 222222222222
Q ss_pred CC----ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PP----WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~----~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+ ...+......+.+.+++..|+.+||++|||++++++
T Consensus 251 ~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 251 TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 11 111222334457889999999999999999999875
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=322.33 Aligned_cols=265 Identities=22% Similarity=0.320 Sum_probs=212.8
Q ss_pred hcccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|...+++|+|.||.||+|+ .++|+.||||+++.....+.......+|+..++.++||||+.++++|.+.+.+.+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 467888899999999999995 5689999999998654444445678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||+. +|...++... ..++..++..++.++++|++|+|++ .|+|||+||.|+|++.+|.+||+|||+|+.+.+...
T Consensus 82 fm~t-dLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred eccc-cHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 9987 9999997654 4588999999999999999999999 899999999999999999999999999999987776
Q ss_pred CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccc-------------CCCCCCCChhHHHH
Q 037111 848 NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS-------------DSSLPGANMNEAID 913 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~-------------~~~~~~~~~~~~~~ 913 (964)
.....+-|..|.|||.++|. .|+..+||||.||++.||+-|.+-|....+.+ ...++....-....
T Consensus 157 ~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~ 236 (318)
T KOG0659|consen 157 IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYV 236 (318)
T ss_pred ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHH
Confidence 66666889999999998875 59999999999999999999876654322211 11111111101111
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
++. ..|.+........+..+..+++.+|+..||.+|++++|+++.
T Consensus 237 ~~~--~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 237 KIQ--QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHh--cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111 233333333445556677899999999999999999998863
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-45 Score=372.92 Aligned_cols=473 Identities=29% Similarity=0.411 Sum_probs=374.3
Q ss_pred eEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccc
Q 037111 62 ISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFV 141 (964)
Q Consensus 62 ~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~ 141 (964)
..+.++++++.-..+ ....+..+.+|++++|+++ ..|++++.+.+++.|+.|+|.++ ++|.+++.+.+|..|+.+.
T Consensus 48 ~~lils~N~l~~l~~--dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 48 QKLILSHNDLEVLRE--DLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhccCchhhccH--hhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 345566665543222 2345778889999999998 68889999999999999999998 8899999999999999999
Q ss_pred cccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccc
Q 037111 142 NHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPS 221 (964)
Q Consensus 142 n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 221 (964)
|.+...+++++.+..|..|+..+|+++ ..|+.++++.+|..|++.+|+++...| ..-+++.|++|+...|-++ .+|.
T Consensus 124 n~~~el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~-~~i~m~~L~~ld~~~N~L~-tlP~ 200 (565)
T KOG0472|consen 124 NELKELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPE-NHIAMKRLKHLDCNSNLLE-TLPP 200 (565)
T ss_pred cceeecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCH-HHHHHHHHHhcccchhhhh-cCCh
Confidence 999988888999999999999999998 678888888889999999999884444 4444888999998888887 6777
Q ss_pred cccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCccc-CccccceeecccccccccCCcccccCcc
Q 037111 222 SFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLS-NLSSLEILHLYDNQLSGHIPQEIGNFMN 300 (964)
Q Consensus 222 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 300 (964)
.++.+.+|+.|||.+|+|. .+| .|.+++.|++|+++.|+|. .+|.... ++++|.+|||.+|++. ..|+.+.-+.+
T Consensus 201 ~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrs 276 (565)
T KOG0472|consen 201 ELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRS 276 (565)
T ss_pred hhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhh
Confidence 8888899999999999988 666 7888888999999999888 5666554 8888899999999988 78888888888
Q ss_pred ccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCC--cCCeee--cCCCccc---c----------cc
Q 037111 301 LNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCT--SLERVR--LEKNQLI---G----------NI 363 (964)
Q Consensus 301 L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~--~L~~L~--L~~N~l~---~----------~~ 363 (964)
|+.||+++|.|++ .|..++.+ .|+.|-+.+|.+..+-.+.+.+-+ -|++|+ +..-.++ + ..
T Consensus 277 L~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~ 354 (565)
T KOG0472|consen 277 LERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSES 354 (565)
T ss_pred hhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCc
Confidence 9999999998886 45667777 888888888876442211111111 022221 1111111 0 01
Q ss_pred CcccCCCCCCcEEEccCCeeccccCccccCCC--ccceEeecccccCCCCCCCCcccccCc-EEeccCCcccccCCcccc
Q 037111 364 SDDFGIYPNLKLFDLSYNKFYGELSSNWWNCP--QLGILKIAGNNITGGIPPEIGNATQLH-ELDFSSNHLVGKVPLELA 440 (964)
Q Consensus 364 ~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~--~L~~L~L~~n~i~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~l~ 440 (964)
.......-+.+.|++++-+++.+....|.... -....+++.|++. .+|..+..+..+. .+++++|.+ +.+|..++
T Consensus 355 ~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~ 432 (565)
T KOG0472|consen 355 FPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELS 432 (565)
T ss_pred ccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHH
Confidence 11112345688899999888866555554332 2778999999998 6677777776654 456666666 58999999
Q ss_pred ccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCee
Q 037111 441 NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSEL 520 (964)
Q Consensus 441 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 520 (964)
.+++|..|+|++|-+. .+|..++.+..|+.||+|.|+|. ..|..+..+..|+.+-.++|++..+.|..+..|.+|+.|
T Consensus 433 ~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tL 510 (565)
T KOG0472|consen 433 QLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTL 510 (565)
T ss_pred hhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhccee
Confidence 9999999999999887 88999999999999999999996 789888888899999999999988888889999999999
Q ss_pred cccCccccCCCChhcccccccceeeccCCcCC
Q 037111 521 DLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 521 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
||.+|.+. .+|+.++++++|++|+|++|+++
T Consensus 511 DL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 511 DLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 99999998 89999999999999999999998
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-42 Score=363.85 Aligned_cols=392 Identities=26% Similarity=0.256 Sum_probs=239.6
Q ss_pred ceeEEeccCCccccCCCccccC--CCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCC-CCCCCEEE
Q 037111 85 HLSYLDLNENQLYGNIPSPIGN--LTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGH-LSSLKNLA 161 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~~p~~~~~--l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~-l~~L~~L~ 161 (964)
.-..||.+++.+...--+.+.. .+.-+.||+|+|.++..-+..|.++++|++++|.+|.++. +|.+++ ..+|+.|+
T Consensus 53 ~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~-IP~f~~~sghl~~L~ 131 (873)
T KOG4194|consen 53 NTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTR-IPRFGHESGHLEKLD 131 (873)
T ss_pred CceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhh-cccccccccceeEEe
Confidence 3445666666654321111111 1223456666666665555556666666666666666653 333333 33466666
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCC
Q 037111 162 LDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241 (964)
Q Consensus 162 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 241 (964)
|.+|.|+..-...+..++.|+.||||.|.|+.+.-.+|..-.++++|+|++|+|+......|..+.+|..|.|++|+++.
T Consensus 132 L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNritt 211 (873)
T KOG4194|consen 132 LRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITT 211 (873)
T ss_pred eeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccc
Confidence 66666655555555556666666666666653333444444556666666666665555555555555555555555554
Q ss_pred CChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCccccc
Q 037111 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQ 321 (964)
Q Consensus 242 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 321 (964)
..+..|.++++|+.|+|..|+|.-.---.|.++++|+.|.|..|.|+..-...|..+.++++|+|+.|+++
T Consensus 212 Lp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~--------- 282 (873)
T KOG4194|consen 212 LPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ--------- 282 (873)
T ss_pred cCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh---------
Confidence 44445555555555555555555221334555555555555555555444444555555555555555444
Q ss_pred CCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEe
Q 037111 322 SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILK 401 (964)
Q Consensus 322 ~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~ 401 (964)
..-..++-++++|+.|+|+.|.|..+..+.+...++|+.|||++|+|+...+.+|..+.+|++|+
T Consensus 283 ---------------~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~Ln 347 (873)
T KOG4194|consen 283 ---------------AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELN 347 (873)
T ss_pred ---------------hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhc
Confidence 44455666777777777777777777777777777777777777777777777777777777777
Q ss_pred ecccccCCCCCCCCcccccCcEEeccCCcccccCCc---cccccCCcceeecccccccCCCchhhhccCCCCceecccCc
Q 037111 402 IAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPL---ELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANR 478 (964)
Q Consensus 402 L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 478 (964)
|+.|.|...-..+|..+.+|++|||++|.|...+.+ .|..+++|+.|+|.||+|..+.-.+|.++.+|+.|||.+|.
T Consensus 348 Ls~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Na 427 (873)
T KOG4194|consen 348 LSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNA 427 (873)
T ss_pred ccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCc
Confidence 777777766666777777888888888877654433 46667777777777777775555677777777777777777
Q ss_pred cccccCCCcccccccceecCCccc
Q 037111 479 FSKSIPGNMGYLLKLHYLNMSSNE 502 (964)
Q Consensus 479 l~~~~~~~~~~l~~L~~L~Ls~N~ 502 (964)
|..+.|.+|..+ .|++|.++.-.
T Consensus 428 iaSIq~nAFe~m-~Lk~Lv~nSss 450 (873)
T KOG4194|consen 428 IASIQPNAFEPM-ELKELVMNSSS 450 (873)
T ss_pred ceeecccccccc-hhhhhhhcccc
Confidence 777777777766 66666655433
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=351.40 Aligned_cols=267 Identities=20% Similarity=0.320 Sum_probs=210.7
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCc-eeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHAR-HSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~ 763 (964)
..++|...++||.|+||.||+|+. .+|..||||+++..... .....=++|+..+++++ ||||+++.+++.+.+ .+|
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 356899999999999999999954 57899999999864332 22233458999999998 999999999998887 999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+|||||+. +|++.++.+ ...+++..++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+...
T Consensus 87 fVfE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eeHHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccc
Confidence 99999987 999999887 67799999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------CCCCCC---ChhHHH
Q 037111 844 PDSSNWSELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------SSLPGA---NMNEAI 912 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------~~~~~~---~~~~~~ 912 (964)
... .+++.+.|..|+|||++. .+-|+.+.||||+||+++|+.+-++-|-...+... .-.+.. .....+
T Consensus 162 Skp-PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 162 SKP-PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred cCC-CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence 543 345678999999999876 45689999999999999999998877643332210 000000 001222
Q ss_pred HhhhccCCC---CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 913 DHMFDARLP---PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 913 ~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
...+.-++| +-........+..+..+++.+|+.+||++||||+|+++.
T Consensus 241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 223333333 222222334467788999999999999999999999863
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-41 Score=360.39 Aligned_cols=261 Identities=25% Similarity=0.405 Sum_probs=214.5
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
+++...+++.....||+|.||+||+|+|. | .||||++....-..+..+.|+.|+..+++-+|.||+-++|||.....
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~- 462 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL- 462 (678)
T ss_pred ccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-
Confidence 33344556777889999999999999985 3 59999998777777788999999999999999999999999998877
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
.+|+.+|+|.+|+.+++... ..++..+.+.||.|||+|+.|||.+ +|||||+|..||++.+++.|||+|||++..-
T Consensus 463 AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeee
Confidence 99999999999999998755 4589999999999999999999999 9999999999999999999999999999654
Q ss_pred CC--CCCCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 843 KP--DSSNWSELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 843 ~~--~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
.. .........|..-|||||++.. .+|++.+||||||+++|||+||..||..... +.+-.++.
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~------------dqIifmVG 606 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR------------DQIIFMVG 606 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh------------hheEEEec
Confidence 32 2333445668889999999974 4689999999999999999999999862221 11111222
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+-.+........+++++.+|+..||..++++||.+.+|+..|+
T Consensus 607 rG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 607 RGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred ccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 221111122334678888999999999999999999999999664
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=385.39 Aligned_cols=254 Identities=27% Similarity=0.463 Sum_probs=214.2
Q ss_pred hhcccccceeecCCceeEEEEEeC--CCC----eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP--SGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
....+..+.||+|+||.||+|.+. +|. .||||.+++. .+.....+|.+|..+|+.++|||||+++|+|-+...
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 345666788999999999999764 233 4899998763 355667899999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEecc
Q 037111 762 SFLVYEYLERGSLARILSSE-----TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDF 836 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df 836 (964)
.++++|||+||+|..||++. ....++..+.+.++.|||+|+.||+++ ++|||||.++|+|+++...|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999864 134588899999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCCccc-c-ccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHH
Q 037111 837 GTAKLLKPDSSNWSE-L-AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 837 g~a~~~~~~~~~~~~-~-~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
|+|+.+...++.... . .-+.+|||||.+..+.|+.|+|||||||++||++| |..|| +.....+.+.
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY-----------~~~~n~~v~~ 915 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPY-----------PSRSNFEVLL 915 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCC-----------CCcchHHHHH
Confidence 999966554443322 2 34569999999999999999999999999999998 78885 3444445555
Q ss_pred -hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 914 -HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 914 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
-.-++++++| ..|+.+++++|..||+.+|++||++..+++.+.
T Consensus 916 ~~~~ggRL~~P------~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~ 959 (1025)
T KOG1095|consen 916 DVLEGGRLDPP------SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDP 959 (1025)
T ss_pred HHHhCCccCCC------CCCChHHHHHHHHHccCChhhCccHHHHHhhhh
Confidence 3445666655 467888999999999999999999999998764
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=347.31 Aligned_cols=256 Identities=26% Similarity=0.423 Sum_probs=207.6
Q ss_pred hhcccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 764 (964)
.+.|+..++||+|.||.||+|+ ..+|+.||+|++.-...++....-..+||.++++++||||+++.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3457778889999999999995 56899999999986665666677788999999999999999999998776 68999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|+|||+. ||..++... .-.+++.++..+++|+++||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+++..
T Consensus 196 VFeYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 9999998 999988653 34599999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCC-ccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc-----
Q 037111 845 DSSN-WSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD----- 917 (964)
Q Consensus 845 ~~~~-~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 917 (964)
.... .+..+-|..|.|||.+.|. .|+.++|+||.|||+.||++|++.|....+. +.++.++.
T Consensus 271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv-----------eQl~kIfklcGSP 339 (560)
T KOG0600|consen 271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV-----------EQLHKIFKLCGSP 339 (560)
T ss_pred CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH-----------HHHHHHHHHhCCC
Confidence 6543 6677889999999998865 5999999999999999999999987533221 11111110
Q ss_pred -----------------cCCC-CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 -----------------ARLP-PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 -----------------~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+ .....+.........++|+..+|..||++|.||.++++
T Consensus 340 ~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 340 TEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0000 01111112333455678999999999999999998874
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=346.28 Aligned_cols=251 Identities=26% Similarity=0.433 Sum_probs=200.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc--eeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR--HSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 765 (964)
.++...+.||+|+||+||++... +|+..|||.+...... ..+.+.+|+.++++++|||||+++|...... .+++.
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 45778899999999999999765 4899999998654221 2567899999999999999999999854444 68999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceEEeccCcccccCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~ 844 (964)
|||+++|+|.+++...+. .+++..++.++.||++||+|||++ +||||||||+|||++. ++.+||+|||.+.....
T Consensus 95 mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 999999999999988776 799999999999999999999999 9999999999999999 79999999999987663
Q ss_pred C---CCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 D---SSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~---~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
. ........||+.|||||++..+ ....++||||+||++.||+||+.||... ....+.+-.+.....
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----------~~~~~~~~~ig~~~~ 240 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----------FEEAEALLLIGREDS 240 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----------cchHHHHHHHhccCC
Confidence 1 1223457899999999999953 3345999999999999999999998642 111122222222221
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.|. . ....+.+..+++.+|+..+|++||||+++++
T Consensus 241 ~P~-i---p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 241 LPE-I---PDSLSDEAKDFLRKCFKRDPEKRPTAEELLE 275 (313)
T ss_pred CCC-C---CcccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 111 1 1224455677788999999999999999986
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=354.37 Aligned_cols=249 Identities=24% Similarity=0.422 Sum_probs=211.1
Q ss_pred hcccccceeecCCceeEEEE-EeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
..|+....||+|+.|.||.| +..+++.||||++... ....++-+.+|+.+|+..+|+|||.+++.|..++.+|+|||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~--~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR--KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEec--cCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence 35777788999999999999 4557889999999643 33445678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||+||+|.|.+.... +++.++..|+.++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 351 ym~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 351 YMEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred ecCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 999999999985433 88999999999999999999999 999999999999999999999999999999888877
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
...+.+|||.|||||+.....|.+++||||||++++||+.|++||-...+ -..+..+....-+.- .
T Consensus 425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P-----------lrAlyLIa~ng~P~l---k 490 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----------LRALYLIATNGTPKL---K 490 (550)
T ss_pred ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh-----------HHHHHHHhhcCCCCc---C
Confidence 88899999999999999999999999999999999999999999753222 122333322222211 1
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+.....+.+++.+||..|+++||++.|+++
T Consensus 491 ~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 491 NPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 22344556777888999999999999999985
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=360.62 Aligned_cols=255 Identities=27% Similarity=0.418 Sum_probs=209.7
Q ss_pred hcccccceeecCCceeEEEEEeCC--C---CeEEEEEecc-ccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS--G---DTVAVKKLHS-FTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~--~---~~vavK~~~~-~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
++....++||+|+||.||+|+++. + ..||||..+. .........+|.+|+++|++++|||||+++|++..+..+
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344556899999999999997653 2 2389999875 335667788999999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++|||+|.||+|.+|+++... .++..+...++.++|.||+|||++ ++|||||.++|+|++.++.+||+|||+++..
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 999999999999999987665 589999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
...........-+.+|+|||.+..+.|++++|||||||++||+++ |..|| ++....+...++.....+
T Consensus 313 ~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py-----------~g~~~~~v~~kI~~~~~r 381 (474)
T KOG0194|consen 313 SQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPY-----------PGMKNYEVKAKIVKNGYR 381 (474)
T ss_pred cceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCC-----------CCCCHHHHHHHHHhcCcc
Confidence 421111112235679999999999999999999999999999998 78885 444455555555343333
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+. ....+..+..++.+||..+|+.||+|.++.+.++
T Consensus 382 ~~~----~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 382 MPI----PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CCC----CCCCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 221 1245566788888999999999999999999875
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=320.70 Aligned_cols=240 Identities=24% Similarity=0.342 Sum_probs=203.7
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
..++|+..+.||.|+||+|..++.+ +|..||+|++.+.. ..-...+...+|..+++.+.||.++++++.|.+.+.+|+
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence 4568999999999999999999765 58889999987542 223334567889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||++||.|..++++. +++++..++.+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||+|+....
T Consensus 122 vmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999999654 4489999999999999999999999 999999999999999999999999999987664
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. .-+.+|||.|+|||.+.+.+|..++|.|||||++|||+.|.+||.... .-...+++..+.+.-|.
T Consensus 197 r---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~-----------~~~iY~KI~~~~v~fP~ 262 (355)
T KOG0616|consen 197 R---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN-----------PIQIYEKILEGKVKFPS 262 (355)
T ss_pred c---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC-----------hHHHHHHHHhCcccCCc
Confidence 4 456799999999999999999999999999999999999999985322 24666777777766432
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERR 951 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~R 951 (964)
-...++.+++.+.++.|-.+|
T Consensus 263 ------~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 263 ------YFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ------ccCHHHHHHHHHHHhhhhHhh
Confidence 122335556667777888777
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=352.45 Aligned_cols=253 Identities=22% Similarity=0.352 Sum_probs=212.4
Q ss_pred HHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCc---hhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCc
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGE---TTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHAR 760 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 760 (964)
...+.|...+.||+|+||+|+.|.. .+++.||+|++...... ....+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3456899999999999999999954 47899999976543111 123456778999999999 999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccCcc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTA 839 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~a 839 (964)
..|+||||+.||+|.+++.. ..++.+..+.+++.|++.|++|+|++ +|+||||||+||+++.+ +++||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999977 44588899999999999999999999 99999999999999999 99999999999
Q ss_pred cccCCCCCCccccccccccccccccccCC-CC-cchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMK-VT-EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~-~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
...........+.+|++.|+|||++.+.. |+ .++||||+||++|.|++|+.||+. .+.......+..
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-----------~~~~~l~~ki~~ 237 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-----------SNVPNLYRKIRK 237 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----------ccHHHHHHHHhc
Confidence 88753445566789999999999999987 86 789999999999999999999874 233345555555
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+.-+..-. ..++..++.+|+.+||.+|+++.+|++
T Consensus 238 ~~~~~p~~~~-----S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 238 GEFKIPSYLL-----SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred CCccCCCCcC-----CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 5555331110 556788888999999999999999973
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=347.42 Aligned_cols=254 Identities=24% Similarity=0.376 Sum_probs=225.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce-eEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH-SFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv 765 (964)
.++|...+++|+|+||.++.++++ ++..||+|++.-.......++...+|+.+++++.|||||.+.+.|..++. .++|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 357888999999999999999665 67789999997666555566688899999999999999999999999888 9999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|+|++||++.+.+.++.+..+++.++..|+.|++.|+.|||+. .|+|||||+.|||++.++.||++|||+|+.+.+.
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999999988878899999999999999999999988 9999999999999999999999999999999988
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........|||.||+||.+.+.+|..|+||||+||++|||++-+++|. ..+....+.++......|-
T Consensus 160 ~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~-----------a~~m~~Li~ki~~~~~~Pl-- 226 (426)
T KOG0589|consen 160 DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFK-----------ASNMSELILKINRGLYSPL-- 226 (426)
T ss_pred hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccC-----------ccchHHHHHHHhhccCCCC--
Confidence 767788899999999999999999999999999999999999999965 4455677777777664432
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
......++..++..|+..+|+.||++.+++..
T Consensus 227 ---p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 227 ---PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 23455668888889999999999999999864
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=345.00 Aligned_cols=239 Identities=29% Similarity=0.469 Sum_probs=200.1
Q ss_pred cccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 692 DESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
...+.||.|+-|.||.|+++ ++.||||+++.. -..+|.-+++++||||+.+.|+|...-.+|+|||||+.
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~el---------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~ 196 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ 196 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhhh---------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccc
Confidence 34567999999999999996 889999997531 12578889999999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|-|+..++.. ..+.......|..+||.|+.|||.+ .|||||||.-||||..+..|||+|||.++..... .....
T Consensus 197 GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMS 270 (904)
T KOG4721|consen 197 GQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMS 270 (904)
T ss_pred ccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-hhhhh
Confidence 9999999654 4478888999999999999999999 9999999999999999999999999999877655 33445
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
++||..|||||++...+.++|+|||||||+||||+||..||........-+ ......+.-. ++..
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw-------GVGsNsL~Lp--------vPst 335 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW-------GVGSNSLHLP--------VPST 335 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE-------eccCCccccc--------Cccc
Confidence 789999999999999999999999999999999999999986433311111 1111111222 2346
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 932 KLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
++.-+.-++++||+-.|..||++++++.-|
T Consensus 336 cP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 336 CPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred CchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 677788889999999999999999998765
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=348.56 Aligned_cols=245 Identities=26% Similarity=0.408 Sum_probs=209.4
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
..++|...++||+|+||+|+.+..+ +++.||||.+++.. ...+..+..+.|.+++... +||.++.++.+|+..+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4568999999999999999999776 67899999998653 3344556777888887766 5999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+.||++..+. ....+++..++.+|..|+.||+|||++ +||+||||.+|||+|.+|++||+|||+++..-
T Consensus 446 fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 999999999944433 344599999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..+...++.+|||.|||||++.+..|+.++|.|||||+||||+.|+.|| ++.+.++..+.++.....-|
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF-----------~gddEee~FdsI~~d~~~yP 588 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPF-----------PGDDEEEVFDSIVNDEVRYP 588 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCC-----------CCCCHHHHHHHHhcCCCCCC
Confidence 5566778899999999999999999999999999999999999999996 45555677777765544322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
....++.+.++.+++.++|++|.-+
T Consensus 589 ------~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 589 ------RFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ------CcccHHHHHHHHHHhccCcccccCC
Confidence 2355667888889999999999966
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=345.69 Aligned_cols=249 Identities=23% Similarity=0.374 Sum_probs=217.9
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccc-cCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSF-TGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
++-|+.++.||.|+.|.|..|++ .+|+.+|||++.+. .........+.+|+.+|+-+.||||+++|+++++..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 45688999999999999999955 58999999999765 33444456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
.||++||-|++++-..+ ++++.+..+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|.... +
T Consensus 91 lEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-~ 164 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV-P 164 (786)
T ss_pred EEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc-C
Confidence 99999999999996554 488899999999999999999999 99999999999999999999999999997644 3
Q ss_pred CCCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
+.-..+.+|+|-|.|||++.+.+|. .++||||.|||+|.++||+.||+ +.+....+.++..+.+..|
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-----------DdNir~LLlKV~~G~f~MP- 232 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-----------DDNIRVLLLKVQRGVFEMP- 232 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-----------CccHHHHHHHHHcCcccCC-
Confidence 4445677999999999999999986 68999999999999999999986 3456677888877777655
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.+..+|+.+|+..||++|-|++||.+
T Consensus 233 -----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 233 -----SNISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred -----CcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 244556788889999999999999999986
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=351.53 Aligned_cols=257 Identities=25% Similarity=0.424 Sum_probs=201.8
Q ss_pred HhhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (964)
..++|++.+.||+|+||.||+|.. .+++.||||+++... .......+.+|+.+++.+ +||||++++++|...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 346799999999999999999964 235679999987432 233446789999999999 899999999988764
Q ss_pred -ceeEEEEEeccCCCHHHHhhhcC--------------------------------------------------------
Q 037111 760 -RHSFLVYEYLERGSLARILSSET-------------------------------------------------------- 782 (964)
Q Consensus 760 -~~~~lv~e~~~~gsL~~~l~~~~-------------------------------------------------------- 782 (964)
...++||||+++|+|.+++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 46899999999999999996532
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC--cccccccc
Q 037111 783 ----ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTY 856 (964)
Q Consensus 783 ----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~ 856 (964)
..++++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++........ .....+++
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 12477888899999999999999999 9999999999999999999999999999865433221 12334567
Q ss_pred ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHH
Q 037111 857 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKS 935 (964)
Q Consensus 857 ~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (964)
.|+|||++.+..++.++|||||||++|||++ |..||..... .......+........ ....+..
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~----------~~~~~~~~~~~~~~~~-----~~~~~~~ 305 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI----------NEEFCQRLKDGTRMRA-----PENATPE 305 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc----------cHHHHHHHhcCCCCCC-----CCCCCHH
Confidence 8999999999999999999999999999997 9999753211 1112222222211111 1223456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 936 IIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 936 l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.+++.+||+.||++|||+.++++.|+
T Consensus 306 l~~li~~cl~~dp~~RPs~~el~~~l~ 332 (338)
T cd05102 306 IYRIMLACWQGDPKERPTFSALVEILG 332 (338)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 888999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=319.43 Aligned_cols=268 Identities=24% Similarity=0.300 Sum_probs=207.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 763 (964)
.+++|+..+.|++|+||.||+|+.+ +++.||+|+++-......-.-.-.+||.++.+.+|||||.+-++.... +..|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 4567999999999999999999654 788999999975443333334567999999999999999999987654 5799
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+|||||+. ||...++... +++...++..++.|+++|++|||.+ .|+|||+|++|+|+...|.+||+|||+|+.++
T Consensus 154 ~VMe~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eeHHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 99999998 9999997655 6688999999999999999999999 89999999999999999999999999999999
Q ss_pred CCCCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccc-------------cCCCCCCCChh
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSL-------------SDSSLPGANMN 909 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~-------------~~~~~~~~~~~ 909 (964)
.+....+..+-|..|.|||.+.+.+ |+.++||||+|||+.||+++++-|...+.. ....+++...-
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 8877778888999999999988754 999999999999999999999876433221 11222222211
Q ss_pred HHHHhhhccCCCCCccccchHH--HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 910 EAIDHMFDARLPPPWLEVGVED--KLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+.....+.......... ....-++++..++..||.+|-|+.|.++
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 1111111111110000000000 2244567888999999999999999864
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=336.16 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=203.6
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
..++|+....||+|+||.||.|+-+ +|..||+|++++... .....+.+.+|-.+|...++|+||+++-.|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 5678999999999999999999654 799999999986532 33445778999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||++||++..+|...+ .+++..++.++.+++-|++.+|+. |+|||||||+|+|||..|++||+|||++.-...
T Consensus 219 iMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhh
Confidence 999999999999996554 488889999999999999999999 999999999999999999999999999852211
Q ss_pred -----------------------CCC----C--------------------ccccccccccccccccccCCCCcchhHHH
Q 037111 845 -----------------------DSS----N--------------------WSELAGTYGYVAPELAYTMKVTEKCDVYS 877 (964)
Q Consensus 845 -----------------------~~~----~--------------------~~~~~g~~~y~aPE~~~~~~~~~~sDvwS 877 (964)
... . ....+|||.|||||++.+.+|+...|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 000 0 01246999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC----CCCCccccchHHHHHHHHHHHHHccCCCCCCCCC
Q 037111 878 FGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR----LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN 953 (964)
Q Consensus 878 lGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs 953 (964)
+|||+|||+.|.+||.. ....+...+++..+ .|.. .+...+..++|.+|+. ||++|.-
T Consensus 374 LG~ImyEmLvGyPPF~s-----------~tp~~T~rkI~nwr~~l~fP~~------~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCS-----------ETPQETYRKIVNWRETLKFPEE------VDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHHHhhhccCCCc------CcccHHHHHHHHHHhc-CHHHhcC
Confidence 99999999999999753 33345555554433 2322 1233556778889998 9999986
Q ss_pred ---HHHHH
Q 037111 954 ---MQIVC 958 (964)
Q Consensus 954 ---~~evl 958 (964)
++||.
T Consensus 436 ~~G~~EIK 443 (550)
T KOG0605|consen 436 SKGAEEIK 443 (550)
T ss_pred cccHHHHh
Confidence 44443
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=338.41 Aligned_cols=248 Identities=28% Similarity=0.452 Sum_probs=209.1
Q ss_pred cccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
.|+....||+|.||.||+|. .++++.||+|++.-. .......++.+|+.++.+++++||.++|+.+..+..++++|||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le-~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLE-EAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechh-hcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 57777899999999999994 457899999998653 3344467888999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
|.||++.+.++... .+++..+.-+++++..|+.|||++ +.+|||||+.||++..+|.+|++|||++..+......
T Consensus 93 ~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred hcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence 99999999996543 347777788999999999999999 9999999999999999999999999999988877776
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
..+.+|||.|||||++.+..|+.++||||+|++.|||++|.+|+....+... -..+....|| ..+.
T Consensus 168 r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv------------lflIpk~~PP-~L~~- 233 (467)
T KOG0201|consen 168 RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV------------LFLIPKSAPP-RLDG- 233 (467)
T ss_pred cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE------------EEeccCCCCC-cccc-
Confidence 7889999999999999998999999999999999999999999865444211 1111222222 2222
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+.+.+.+++..|+++||+.||+|.++++
T Consensus 234 --~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 234 --DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred --ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 45556778888999999999999999876
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=324.49 Aligned_cols=247 Identities=23% Similarity=0.396 Sum_probs=213.0
Q ss_pred hcccccceeecCCceeEEEEE-eCCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.+|++.+.||+|.||.|-+|. ...|+.||||.+++.. .++.+...+.+|+++|..++||||+.++++|+..+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 578888999999999999994 4789999999987543 34455667889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||..+|.|+||+.+.+ .+++.+.+.++.||+.|+.|+|.+ +++|||+|.+|||+|.++++||+|||++..+...
T Consensus 133 EYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~- 206 (668)
T KOG0611|consen 133 EYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYADK- 206 (668)
T ss_pred EecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhccc-
Confidence 9999999999996554 489999999999999999999999 9999999999999999999999999999776543
Q ss_pred CCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
....+++|+|-|.+||++.+.+|. +.+|-||+||++|.++.|..||+ +.+.+..+.++-.+.+..+.
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFD-----------G~Dhk~lvrQIs~GaYrEP~- 274 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFD-----------GRDHKRLVRQISRGAYREPE- 274 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccC-----------CchHHHHHHHhhcccccCCC-
Confidence 345678999999999999999985 78999999999999999999976 44455667777666665442
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+.+..-+|.+|+..+|++|.|+.+|..
T Consensus 275 ------~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 275 ------TPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred ------CCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 2233456788999999999999999864
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=304.99 Aligned_cols=251 Identities=27% Similarity=0.420 Sum_probs=215.6
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
+.++|++.+.||+|.||.||.|+.+ ++-.||+|++.+.. .......++.+|+++-..++||||+++|++|.++...|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 4678999999999999999999664 67789999986542 223334678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
++||.+.|++...+..+...++++.....++.|+|.|+.|+|.. +||||||||+|+|++.++..|++|||.+....
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 99999999999999877777899999999999999999999999 99999999999999999999999999996543
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.....+.+||..|.|||...+..++..+|+|++|++.||++.|.+||+... ..+...++..-++..|
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-----------~~etYkrI~k~~~~~p- 242 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-----------HSETYKRIRKVDLKFP- 242 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-----------hHHHHHHHHHccccCC-
Confidence 455678899999999999999999999999999999999999999986322 3355555544443322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........++|.+|+..+|.+|.+..||++
T Consensus 243 -----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 243 -----STISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred -----cccChhHHHHHHHHhccCccccccHHHHhh
Confidence 234455778899999999999999999975
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=339.67 Aligned_cols=259 Identities=24% Similarity=0.436 Sum_probs=218.1
Q ss_pred HHHHHHhhcccccceeecCCceeEEEEEeCC-CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 682 EEIIRSINNFDESFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 682 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
++++-...+..+..+||.|.||.||.|.|+. .-.||||.++. +.....+|++|+.+|+.++|||+|+++|+|..+-
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE---DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh---cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 4455555677888999999999999998863 55799999875 4455789999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..|+|+|||..|+|.+|+++..+..++.-..+.||.||+.|++||..+ ++||||+.++|+|+.++..|||+|||+++
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhh
Confidence 999999999999999999998888888888899999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCCcc-ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 841 LLKPDSSNWS-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 841 ~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
.+..+.+... ...-+..|.|||.+....++.++|||+|||++||+.| |-.| +++.+..+..+ .+..
T Consensus 414 lMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsP-----------YPGidlSqVY~-LLEk 481 (1157)
T KOG4278|consen 414 LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP-----------YPGIDLSQVYG-LLEK 481 (1157)
T ss_pred hhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCC-----------CCCccHHHHHH-HHhc
Confidence 9886654322 2233678999999999999999999999999999998 6666 45555433322 2222
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.. ...+.|+.+++++|..||++.|..||+++|+.+.++
T Consensus 482 gyRM----~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 482 GYRM----DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred cccc----cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 2221 123568889999999999999999999999998875
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=328.58 Aligned_cols=253 Identities=23% Similarity=0.328 Sum_probs=204.2
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc-------h-----hhHHHHHHHHHHHhCCCCCceeeE
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE-------T-----THQKEFLSEIKALTGVRHRNIVKF 752 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~-----~~~~~~~~E~~~l~~l~h~niv~l 752 (964)
+.+++|++.+.||+|.||.|-+|+.. +++.||||++.+.... . ...+.+.+||.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 45788999999999999999999654 7899999998653211 1 112478899999999999999999
Q ss_pred EeeeecC--ceeEEEEEeccCCCHHHHhhhcCCCC-CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 753 YGFCSHA--RHSFLVYEYLERGSLARILSSETATE-MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 753 ~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
+++..+. +.+|||+|||..|.+..- ....+ +++.++++++.+++.||+|||.+ +||||||||+|+|++++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 9999774 589999999998877643 23333 88999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCC-----CCCccccccccccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCccccccC
Q 037111 830 EAHVSDFGTAKLLKPD-----SSNWSELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD 900 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~----~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~ 900 (964)
+|||+|||.+...... .......+|||.|+|||...++. ...+.||||+||+||.|+.|+.||-.
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~------ 321 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD------ 321 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc------
Confidence 9999999999876332 12233468999999999988743 34689999999999999999999742
Q ss_pred CCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 901 SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...-+..++++..++.-+. ..+.-..+.+++.+++.+||+.|-+..+|..
T Consensus 322 -----~~~~~l~~KIvn~pL~fP~----~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 322 -----DFELELFDKIVNDPLEFPE----NPEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred -----chHHHHHHHHhcCcccCCC----cccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 2234666777666655432 1244556778889999999999999998864
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=336.45 Aligned_cols=262 Identities=26% Similarity=0.396 Sum_probs=212.9
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
....++++||+|-||.|..+....+..||||+++.. .......+|.+|+++|.+++||||++++|+|..++.+++|+||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~-a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPD-ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcc-cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 456678899999999999999887799999999753 3444468999999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
|++|+|.+|+.++......-....+|+.||+.|++||.+. ++||||+.++|+|+|.++++||+|||+++.....++.
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCce
Confidence 9999999999876544445566778999999999999999 9999999999999999999999999999976655443
Q ss_pred c--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 849 W--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 849 ~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ...+-+.+|||||.+.-++++.++|||+|||++||+++ ...||..... ....+....+++..- ...
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~--------e~vven~~~~~~~~~-~~~ 764 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD--------EQVVENAGEFFRDQG-RQV 764 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH--------HHHHHhhhhhcCCCC-cce
Confidence 2 23345789999999999999999999999999999875 6778653322 111111122222111 111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+.-++..+++++.+||+.+.++||+++++...|..
T Consensus 765 ~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 765 VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 223345678889999999999999999999999998864
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=333.22 Aligned_cols=246 Identities=22% Similarity=0.318 Sum_probs=198.6
Q ss_pred cceeecCCceeEEEEEeCCCCeEEEEEeccccCc-hhhHHHHHHHHHHHhCCCCCceeeEEeeeec----CceeEEEEEe
Q 037111 694 SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE-TTHQKEFLSEIKALTGVRHRNIVKFYGFCSH----ARHSFLVYEY 768 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 768 (964)
...||+|++|.||+|.+ +|+.||||++...... ....+.+.+|+.++++++||||++++|++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999988 5899999998754322 2224678899999999999999999999876 3468999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++... ..+++....+++.+++.|++|||+.. +++||||||+||++++++.+|++|||+++......
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 9999999999754 35888999999999999999999732 78899999999999999999999999998654322
Q ss_pred cccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 849 WSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||... ...+....+......++.
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~-----------~~~~~~~~i~~~~~~~~~-- 243 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL-----------TTKEIYDLIINKNNSLKL-- 243 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC-----------CHHHHHHHHHhcCCCCCC--
Confidence 23467889999999976 67999999999999999999999998632 122333333222222111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...++..+.+++.+||+.||++|||++++++.|+
T Consensus 244 --~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 244 --PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred --CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 1134566888999999999999999999999885
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=308.09 Aligned_cols=253 Identities=21% Similarity=0.331 Sum_probs=209.4
Q ss_pred hhcccccceeecCCceeEEEE-EeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.+.|++.+.||+|.|+.||++ ..++|+.+|+|++.-..-.....+++.+|+.+.+.++|||||++.+.+..+...|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 356888889999999999999 5568999999988654444446788999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~a~~~~ 843 (964)
|+|.||+|..-+-.+ .-.++..+..++.||++|+.|+|.+ +|||||+||+|+++.. ...+|++|||+|....
T Consensus 90 e~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred ecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999997655333 2367788889999999999999999 9999999999999954 3469999999999888
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
+.......+|||+|||||++...+|+.++|||+.||++|-++.|+.||.. .......+++..+.+..+
T Consensus 165 -~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~-----------~~~~rlye~I~~g~yd~~ 232 (355)
T KOG0033|consen 165 -DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD-----------EDQHRLYEQIKAGAYDYP 232 (355)
T ss_pred -CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC-----------ccHHHHHHHHhccccCCC
Confidence 55666788999999999999999999999999999999999999999863 223455666665554422
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ..+....++..+++.+|+..||.+|-|+.|.++
T Consensus 233 ~--~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 233 S--PEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred C--cccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 1 112333445567788999999999999998764
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=333.90 Aligned_cols=253 Identities=23% Similarity=0.274 Sum_probs=201.7
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... .......+.+|+.++++++|++|+++++++.+++..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 377889999999999999965 5789999999864322 22233467889999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 99999999988665555689999999999999999999999 99999999999999999999999999997654322
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .........+......
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~------ 223 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER-------VKREEVDRRVKEDQEE------ 223 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc-------hhHHHHHHHhhccccc------
Confidence 223457899999999999999999999999999999999999998642210 0011111111111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPN-----MQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl~ 959 (964)
........+.+++.+||+.||++||+ ++++++
T Consensus 224 ~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 224 YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 11223456788899999999999997 777764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=335.24 Aligned_cols=266 Identities=21% Similarity=0.283 Sum_probs=199.6
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.+ +++.||+|+++... .......+.+|+.++++++||||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH-EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc-cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 357999999999999999999654 68899999986432 2223356778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++ +|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 83 e~~~~-~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 83 EYLDS-DLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred eCCCc-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 99975 9999986543 3478889999999999999999999 99999999999999999999999999997654443
Q ss_pred CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------------CCCCCCChhHHH
Q 037111 847 SNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------------SSLPGANMNEAI 912 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------------~~~~~~~~~~~~ 912 (964)
.......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||........ ...+.....+..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 33345568899999998865 5689999999999999999999999853221100 000000000000
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......................+..+++.+|+..||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000000000001122345778999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-37 Score=328.82 Aligned_cols=255 Identities=21% Similarity=0.345 Sum_probs=204.7
Q ss_pred hhcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
..+|++.+.||+|+||.||+|.++ .+..||+|+++... .......+.+|+.++++++||||+++++++..++..+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 356889999999999999999653 45689999987532 2334567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.++++|||.+....
T Consensus 83 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999997643 3588999999999999999999999 99999999999999999999999999876543
Q ss_pred CCCCC-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 844 PDSSN-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 844 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
..... .....++..|+|||.+.+..++.++|||||||++||+++ |+.||.... ..+....+.+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~-----------~~~~~~~~~~~~~~ 227 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS-----------GQDVIKAVEDGFRL 227 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC-----------HHHHHHHHHCCCCC
Confidence 22111 112234678999999999999999999999999999875 999985322 12223332222111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
+. ...++..+.+++.+||+++|++||+++++.+.|+.
T Consensus 228 ~~-----~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 228 PA-----PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred CC-----CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 11 12355668889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=341.57 Aligned_cols=243 Identities=21% Similarity=0.278 Sum_probs=199.0
Q ss_pred ceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 695 FCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
+.||+|+||.||+|+. .+|+.||+|+++... ........+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999965 478899999987532 12333456788999999999999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccc
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 852 (964)
+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 155 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccce
Confidence 999999654 3488999999999999999999999 99999999999999999999999999997644333334456
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHH
Q 037111 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDK 932 (964)
Q Consensus 853 ~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (964)
.|++.|+|||.+.+..++.++||||+||++|||++|+.||... ........+.......+ ...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----------~~~~~~~~~~~~~~~~p------~~~ 218 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----------DHEKLFELILMEEIRFP------RTL 218 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC-----------CHHHHHHHHHcCCCCCC------CCC
Confidence 7999999999999999999999999999999999999998521 12233333333322211 123
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 933 LKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 933 ~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
..++.+++.+||+.||++|| ++.++++
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 219 SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 45577888999999999999 7888864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=332.63 Aligned_cols=249 Identities=35% Similarity=0.554 Sum_probs=197.4
Q ss_pred ccceeecCCceeEEEEEeC-----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 693 ESFCIGRGGYGSVYKAELP-----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
..+.||.|.||.||+|.+. .+..|+||.++. .........+.+|++.+++++||||++++|++...+..++|||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 4578999999999999776 356799999964 3334446889999999999999999999999998888999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..|+.||++||+|||+. +++||||+++||+++.++.+||+|||++........
T Consensus 82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 99999999999887566799999999999999999999999 999999999999999999999999999987632222
Q ss_pred C--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 N--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 ~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. .........|+|||.+.+..++.++||||||+++|||++ |+.||.. ....+....+.+....+.
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~-----------~~~~~~~~~~~~~~~~~~- 226 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSD-----------YDNEEIIEKLKQGQRLPI- 226 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTT-----------SCHHHHHHHHHTTEETTS-
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-----------ccccccccccccccccee-
Confidence 1 223456778999999999889999999999999999999 6788542 233344444433322221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
...++..+.+++.+||+.||++||+++++++.|
T Consensus 227 ----~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 ----PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 123456688899999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=346.97 Aligned_cols=248 Identities=28% Similarity=0.500 Sum_probs=207.7
Q ss_pred ccccceeecCCceeEEEEEe-CCCC----eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 691 FDESFCIGRGGYGSVYKAEL-PSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
....++||+|+||+||+|.+ ++|+ +||||++....+ .....++++|+..|.+++|||+++++|+|.... +.+|
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~-~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS-PKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC-chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 55678999999999999954 4554 689999876544 344578999999999999999999999998876 8899
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
++||+.|+|.||++.+. ..+..+..+.|..|||+|+.|||.+ ++|||||.++|||+.+-..+||.|||+++...++
T Consensus 776 tq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 99999999999998754 4588899999999999999999998 9999999999999999999999999999998877
Q ss_pred CCCcccccc--ccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhh--ccCC
Q 037111 846 SSNWSELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMF--DARL 920 (964)
Q Consensus 846 ~~~~~~~~g--~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 920 (964)
...+....| .+.|||-|.+....|+.++|||||||++||++| |..|++.... +.+.+.+ ..++
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~------------~eI~dlle~geRL 919 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA------------EEIPDLLEKGERL 919 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH------------HHhhHHHhccccC
Confidence 666554444 568999999999999999999999999999998 8899753222 1222221 2334
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.| +.+..++..++.+||..|++.||+++++...+.
T Consensus 920 sqP------piCtiDVy~~mvkCwmid~~~rp~fkel~~~fs 955 (1177)
T KOG1025|consen 920 SQP------PICTIDVYMVMVKCWMIDADSRPTFKELAEEFS 955 (1177)
T ss_pred CCC------CCccHHHHHHHHHHhccCcccCccHHHHHHHHH
Confidence 433 467788999999999999999999999887664
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=334.78 Aligned_cols=262 Identities=23% Similarity=0.367 Sum_probs=200.8
Q ss_pred hcccccceeecCCceeEEEEEeCC-----------------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS-----------------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 751 (964)
++|++.+.||+|+||.||+|.+++ +..||+|.+... .......++.+|+.++++++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 578889999999999999997532 236999988643 23344567999999999999999999
Q ss_pred EEeeeecCceeEEEEEeccCCCHHHHhhhcCC-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 037111 752 FYGFCSHARHSFLVYEYLERGSLARILSSETA-----------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814 (964)
Q Consensus 752 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ii 814 (964)
+++++.+.+..++||||+++|+|.+++..... ..+++..+.+++.||+.|++|||+. +|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 99999999999999999999999999864321 2367788999999999999999999 999
Q ss_pred eccCCCCCeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh--CCC
Q 037111 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GQH 890 (964)
Q Consensus 815 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t--g~~ 890 (964)
||||||+||+++.++.+||+|||+++........ .....++..|+|||++.++.++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999765433221 122345778999999988889999999999999999997 456
Q ss_pred CCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 891 PKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 891 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
||..... ....+............. .......++..+.+++.+||..||++|||+.+|.+.|+.
T Consensus 241 p~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 241 PYGELTD--------EQVIENAGEFFRDQGRQV-YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCcCCH--------HHHHHHHHHHhhhccccc-cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 6542211 000011111111100000 000112344668899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=345.24 Aligned_cols=257 Identities=26% Similarity=0.414 Sum_probs=202.3
Q ss_pred hhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 760 (964)
.++|+..+.||+|+||.||+|++ .++..||||+++... .....+.+.+|+.+++.+ +||||++++++|.+.+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 45789999999999999999963 245689999986432 233346788999999999 8999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcC----------------------------------------------------------
Q 037111 761 HSFLVYEYLERGSLARILSSET---------------------------------------------------------- 782 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 782 (964)
..++||||+++|+|.+++....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 9999999999999999986422
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 783 ---------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 783 ---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
...+++..+.+++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 12477888999999999999999999 999999999999999999999999999986644322
Q ss_pred C--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 N--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 ~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. .....++..|+|||.+.+..++.++|||||||++|||++ |..||..... .....+.......+..
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~ 338 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-----------DSKFYKMIKEGYRMLS 338 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-----------hHHHHHHHHhCccCCC
Confidence 1 112334668999999999999999999999999999998 8888753211 1111111111111110
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+.++.+++.+||++||++||++++|++.|+.
T Consensus 339 ----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 339 ----PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ----CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 01123468889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=338.68 Aligned_cols=243 Identities=24% Similarity=0.345 Sum_probs=197.2
Q ss_pred eecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCH
Q 037111 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL 774 (964)
Q Consensus 697 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 774 (964)
||+|+||.||+|+.. +++.||+|++.... ........+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999765 57899999986432 2233456788899999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccc
Q 037111 775 ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG 854 (964)
Q Consensus 775 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g 854 (964)
.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.............|
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 155 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCG 155 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccC
Confidence 9999654 3488999999999999999999999 9999999999999999999999999999765433333445679
Q ss_pred ccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHH
Q 037111 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLK 934 (964)
Q Consensus 855 ~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (964)
++.|+|||.+.+..++.++||||+||++|||++|+.||... ...+....+.......+ .....
T Consensus 156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~-----------~~~~~~~~~~~~~~~~~------~~~~~ 218 (312)
T cd05585 156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----------NVNEMYRKILQEPLRFP------DGFDR 218 (312)
T ss_pred CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC-----------CHHHHHHHHHcCCCCCC------CcCCH
Confidence 99999999999999999999999999999999999998532 22334444443333221 12335
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 935 SIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 935 ~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
.+.+++.+||+.||++||++..+.+.|
T Consensus 219 ~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 219 DAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 577888999999999998654443333
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=335.54 Aligned_cols=246 Identities=23% Similarity=0.301 Sum_probs=202.3
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|..+ +++.||+|++..... .......+.+|+.++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999765 688999999864321 2233456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 9999999999996543 488899999999999999999999 9999999999999999999999999999765432
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||... ...+....+.......+
T Consensus 155 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~-----------~~~~~~~~i~~~~~~~~--- 218 (291)
T cd05612 155 --TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD-----------NPFGIYEKILAGKLEFP--- 218 (291)
T ss_pred --cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----------CHHHHHHHHHhCCcCCC---
Confidence 22356899999999999988999999999999999999999998532 12233344443333221
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPN-----MQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl~ 959 (964)
......+.+++.+||..||++||+ ++++++
T Consensus 219 ---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 219 ---RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ---ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 112345778889999999999995 777764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=340.41 Aligned_cols=246 Identities=22% Similarity=0.281 Sum_probs=203.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.... ........+.+|+.++++++||||+++++++.+++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 357999999999999999999765 68899999986432 1223346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 97 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EcCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 99999999999997543 478888999999999999999999 9999999999999999999999999999865433
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
. ....|++.|+|||.+.+..++.++|||||||++|||++|+.||... ...+....+.....+.+.
T Consensus 172 ~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~-----------~~~~~~~~i~~~~~~~p~- 236 (329)
T PTZ00263 172 T---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD-----------TPFRIYEKILAGRLKFPN- 236 (329)
T ss_pred c---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC-----------CHHHHHHHHhcCCcCCCC-
Confidence 2 2357899999999999999999999999999999999999998532 122334444444433221
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPN-----MQIVC 958 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl 958 (964)
.....+.+++.+||+.||++||+ +++++
T Consensus 237 -----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 237 -----WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred -----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 12245678889999999999997 56665
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=327.29 Aligned_cols=256 Identities=28% Similarity=0.470 Sum_probs=212.2
Q ss_pred HhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
...+|+..+.||+|+||.||+|..++++.||+|.+... .......+..|+.+++.++||||+++++++......++||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSD--DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEecccc--chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 44678999999999999999999888999999998643 2223467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||.+.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 999999999999876666789999999999999999999999 99999999999999999999999999998765443
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.......++..|+|||.+.+..++.++||||||+++|+|++ |+.||.... ..+....+......+
T Consensus 159 ~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~-----------~~~~~~~~~~~~~~~--- 224 (261)
T cd05148 159 YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN-----------NHEVYDQITAGYRMP--- 224 (261)
T ss_pred ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC-----------HHHHHHHHHhCCcCC---
Confidence 33334456778999999998889999999999999999998 888975322 223333332221111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....++..+.+++.+||..||++|||++++++.|++
T Consensus 225 --~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 225 --CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 112344568899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=325.57 Aligned_cols=254 Identities=22% Similarity=0.418 Sum_probs=208.5
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|...++..||+|.+... ....+.+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG---TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 81 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC---chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence 4679999999999999999998888889999987642 2235678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+........
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 82 YMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred cCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 99999999999876666688999999999999999999998 999999999999999999999999999987654322
Q ss_pred C-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 848 N-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 848 ~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
. .....++..|+|||++.+..++.++|||||||++|+|++ |+.||... ........+... .+.+.
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~-----------~~~~~~~~~~~~-~~~~~- 225 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGM-----------SNSDVMSALQRG-YRMPR- 225 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCC-----------CHHHHHHHHHcC-CCCCC-
Confidence 1 122345678999999988889999999999999999998 89997421 112222222222 11111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 226 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 226 ---MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ---CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 12244568889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=315.45 Aligned_cols=269 Identities=22% Similarity=0.311 Sum_probs=204.8
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc-eeeEEeeeecCc-----
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN-IVKFYGFCSHAR----- 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~----- 760 (964)
...|+..++||+|+||+||+|+. .+|+.||+|++.-....+.......+|+.+++.++|+| ||++++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 45577788899999999999965 47899999998754333333456789999999999999 999999998877
Q ss_pred -eeEEEEEeccCCCHHHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccC
Q 037111 761 -HSFLVYEYLERGSLARILSSETA--TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 761 -~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
..++|+||++. +|.+++..... ..++...++.++.||+.|++|||++ +|+||||||+||+++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 78999999976 99999987553 3577788999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccc-------------CCCC
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS-------------DSSL 903 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~-------------~~~~ 903 (964)
+|+...-+.......++|..|.|||++.+. .|+...||||+||+++||++++.-|....+.. ...+
T Consensus 166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 999777555556667889999999999876 68999999999999999999988875433311 0111
Q ss_pred CCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 904 PGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
++...-......+.....+............+..+++.+|+..+|.+|.|++.+++.
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 111000000000000000000000011111367889999999999999999998863
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=328.94 Aligned_cols=256 Identities=27% Similarity=0.466 Sum_probs=207.9
Q ss_pred hhcccccceeecCCceeEEEEEeCC------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|+..+.||+|+||.||+|.... ...||+|.+... ........+.+|+..+++++||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 3578889999999999999997542 247999988643 233445678999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC
Q 037111 762 SFLVYEYLERGSLARILSSETA--------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~ 827 (964)
.+++|||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence 9999999999999999975322 4578889999999999999999999 9999999999999999
Q ss_pred CCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCC
Q 037111 828 EYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 828 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~ 904 (964)
++.++|+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~-------- 231 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS-------- 231 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC--------
Confidence 99999999999976543322 1223456788999999988899999999999999999998 999975321
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..+....+.....++ ....++.++.+++.+||+.||++||++++|++.|++
T Consensus 232 ---~~~~~~~i~~~~~~~-----~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 232 ---NQEVIEMIRSRQLLP-----CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHHHHHHHHcCCcCC-----CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 223333333322221 123456778999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=321.44 Aligned_cols=261 Identities=28% Similarity=0.494 Sum_probs=199.1
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHh--CCCCCceeeEEeeeecCc----e
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALT--GVRHRNIVKFYGFCSHAR----H 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~--~l~h~niv~l~~~~~~~~----~ 761 (964)
....+..+++|+|.||.||+|.+. ++.||||++.. ..++.|.+|-++++ .++|+||++++++-.... .
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 345566778999999999999996 69999999853 34567777777765 468999999999987665 8
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEeccCCCCCeEECCCCceEEec
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC------RPPIVHRDVSSKNVLLDFEYEAHVSD 835 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~iiH~dlkp~Nill~~~~~~kl~D 835 (964)
+++|+||.+.|+|.+|++.+. ++|....+|+..+++||+|||+.. +++|+|||||.+|||+..|+++.|+|
T Consensus 283 ywLVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred eeEEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 899999999999999997654 899999999999999999999754 67899999999999999999999999
Q ss_pred cCcccccCCCCCC--ccccccccccccccccccCC-CC-----cchhHHHHHHHHHHHHhCCCCCCccccccCCCC----
Q 037111 836 FGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMK-VT-----EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL---- 903 (964)
Q Consensus 836 fg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~-~~-----~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~---- 903 (964)
||+|..+.+.... ....+||.+|||||++.+.. +. .+.||||+|.++|||+++...++. ........
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~-~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP-GPVPEYQLPFEA 438 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC-CCCCcccCchhH
Confidence 9999887755332 23468999999999987643 22 379999999999999997655432 11111111
Q ss_pred ---CCCChhHH----HHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 904 ---PGANMNEA----IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 904 ---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
.....++. +.+..++.++..|... ..+.-+.+.+..||+.||+.|.|+.=|-+.+
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h---~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKH---AGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcC---ccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 11112222 2233344444444433 3344566777899999999999998776654
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=343.43 Aligned_cols=257 Identities=26% Similarity=0.409 Sum_probs=202.1
Q ss_pred hhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 760 (964)
.++|++.+.||+|+||.||+|... ++..||+|+++... .......+.+|+.+++.+ +||||++++++|...+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 457999999999999999998642 33579999987533 233356788999999999 8999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcC----------------------------------------------------------
Q 037111 761 HSFLVYEYLERGSLARILSSET---------------------------------------------------------- 782 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 782 (964)
..++||||+++|+|.+++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999999999999985421
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC--cc
Q 037111 783 ----------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WS 850 (964)
Q Consensus 783 ----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~ 850 (964)
..++++..+.+++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++........ ..
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 12477888999999999999999999 9999999999999999999999999999765433211 11
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccch
Q 037111 851 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929 (964)
Q Consensus 851 ~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (964)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .............+.. .
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~-----------~~~~~~~~~~~~~~~~----~ 337 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV-----------NSKFYKMVKRGYQMSR----P 337 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc-----------cHHHHHHHHcccCccC----C
Confidence 2235668999999998899999999999999999997 9999853211 1111122222111110 0
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 930 EDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 930 ~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
...+.++.+++.+||+.||++||++.+|++.|+.
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1123568889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=336.73 Aligned_cols=243 Identities=21% Similarity=0.279 Sum_probs=197.9
Q ss_pred ceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 695 FCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
+.||+|+||.||+++. .+|+.||+|++.... ........+.+|+.+++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999965 468999999987532 12233456778999999999999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccc
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 852 (964)
+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.............
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 155 (323)
T cd05595 81 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccc
Confidence 9999886543 488999999999999999999999 99999999999999999999999999987644333333456
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHH
Q 037111 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDK 932 (964)
Q Consensus 853 ~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (964)
.|++.|+|||++.+..++.++|||||||++|||++|+.||... ........+.......+ ...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~-----------~~~~~~~~~~~~~~~~p------~~~ 218 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----------DHERLFELILMEEIRFP------RTL 218 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCC-----------CHHHHHHHHhcCCCCCC------CCC
Confidence 7899999999999999999999999999999999999998532 12233333333222211 123
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 933 LKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 933 ~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
..++.+++.+||+.||++|| ++.++++
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 219 SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 45577888899999999998 7887764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=323.09 Aligned_cols=251 Identities=24% Similarity=0.404 Sum_probs=204.1
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|+||.||+|+++++..||+|.+... ......+.+|+.++++++||||+++++++......++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG---AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC---CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 468888999999999999999888889999987632 22346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||.++........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 81 MENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred CCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 99999999997543 2488999999999999999999999 9999999999999999999999999998765433221
Q ss_pred -ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 849 -WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 849 -~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+....+.....+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-----------~~~~~~~i~~~~~~~~--- 222 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-----------NYEVVEMISRGFRLYR--- 222 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC-----------HHHHHHHHHCCCCCCC---
Confidence 122235568999999988889999999999999999999 888975321 2233333332221111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+.+++.+||+++|++||+++++++.|.
T Consensus 223 --~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 223 --PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred --CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0112346789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=314.21 Aligned_cols=256 Identities=25% Similarity=0.412 Sum_probs=197.6
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHH--HhCCCCCceeeEEeeeecC----ce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKA--LTGVRHRNIVKFYGFCSHA----RH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~----~~ 761 (964)
..+....+.||+|.||.||+|++. |+.||||+|...+. +...+|.++ -..++|+||+.+++.-..+ .+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE-----~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE-----RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecccch-----hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 346788899999999999999997 89999999975322 233445555 4556999999999987554 36
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEeccCCCCCeEECCCCceEEecc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE-----CRPPIVHRDVSSKNVLLDFEYEAHVSDF 836 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~iiH~dlkp~Nill~~~~~~kl~Df 836 (964)
+|+|++|.+.|||+||+.. ..++....++++..+|.||++||.. .++.|.|||||+.|||+.+++.+.|+|+
T Consensus 284 LwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 8999999999999999965 3488899999999999999999964 3789999999999999999999999999
Q ss_pred CcccccCCCCC----CccccccccccccccccccCC----C--CcchhHHHHHHHHHHHHhCC----------CCCCccc
Q 037111 837 GTAKLLKPDSS----NWSELAGTYGYVAPELAYTMK----V--TEKCDVYSFGVLALEVIKGQ----------HPKDLLS 896 (964)
Q Consensus 837 g~a~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~----~--~~~sDvwSlGvll~el~tg~----------~p~~~~~ 896 (964)
|+|........ .....+||-+|||||++.... | -..+||||||.++||++.+. .||...-
T Consensus 361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 99976654422 234678999999999986532 1 23699999999999998632 3433211
Q ss_pred cccCCCCCCCChhHHHHh-----hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 897 SLSDSSLPGANMNEAIDH-----MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+ .+... +.+.+ .+.+.+|..| ...+.+..+.++|..||..+|.-|.|+-.+.+.|.
T Consensus 441 p------~DPs~-eeMrkVVCv~~~RP~ipnrW---~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~ 501 (513)
T KOG2052|consen 441 P------SDPSF-EEMRKVVCVQKLRPNIPNRW---KSDPALRVMAKLMKECWYANPAARLTALRIKKTLA 501 (513)
T ss_pred C------CCCCH-HHHhcceeecccCCCCCccc---ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHH
Confidence 1 11112 22222 2344444444 34578889999999999999999999988888764
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=335.75 Aligned_cols=243 Identities=22% Similarity=0.285 Sum_probs=198.1
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
+.||+|+||.||+++.+ +++.||+|++.... ........+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999654 68999999987532 22334567889999999999999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccc
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 852 (964)
+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++............
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~ 155 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF 155 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccc
Confidence 999998654 3488999999999999999999999 99999999999999999999999999987644333333456
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHH
Q 037111 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDK 932 (964)
Q Consensus 853 ~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (964)
.|++.|+|||.+.+..++.++||||+||++|||++|+.||... ...+....+.......+ ...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~-----------~~~~~~~~~~~~~~~~p------~~~ 218 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----------DHEKLFELILMEDIKFP------RTL 218 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC-----------CHHHHHHHhccCCccCC------CCC
Confidence 7999999999999889999999999999999999999998532 12223333322222211 123
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 933 LKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 933 ~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
..++.+++.+||.+||++|| ++.++++
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 219 SADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 34577888899999999997 7888874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=323.00 Aligned_cols=259 Identities=22% Similarity=0.351 Sum_probs=210.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+.+ +++.||||.+.... ........+.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57899999999999999999754 78999999876432 23344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||+++|+|.+++... ....+++..+..++.|++.|++|||++ +++||||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999988642 234478889999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........+++.|+|||.+.+..++.++||||+|+++|||++|+.||.... .........+.....++.
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~- 228 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---------MNLFSLCQKIEQCDYPPL- 228 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc---------ccHHHHHHHHhcCCCCCC-
Confidence 4333334568889999999998889999999999999999999999974221 111222232222222221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
........+.+++.+||+.+|++||++.+|++.++.
T Consensus 229 ---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 229 ---PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred ---ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 122345668899999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=320.39 Aligned_cols=251 Identities=24% Similarity=0.396 Sum_probs=211.0
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|++|.||+|..+ +++.|++|.+............+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778889999999999999764 688999999875444455667899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++++|.+++.......+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+.........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence 9999999999876556789999999999999999999998 9999999999999999999999999999876655444
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....+++.|+|||+..+..++.++||||||+++|+|++|+.||.... ..+....+.....++.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~----- 221 (256)
T cd08529 158 ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN-----------QGALILKIIRGVFPPV----- 221 (256)
T ss_pred hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHcCCCCCC-----
Confidence 445568899999999999889999999999999999999999985322 1233333333332221
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||+.+|++||++.++++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 222 SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred ccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 1134466889999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=337.30 Aligned_cols=248 Identities=21% Similarity=0.278 Sum_probs=202.4
Q ss_pred HhhcccccceeecCCceeEEEEEeCC--CCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELPS--GDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
..++|++.+.||+|+||.||+|..+. +..||+|++.... ........+.+|+.+++.++||||+++++++.+++..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 34579999999999999999997543 3689999986432 22333467889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 108 lv~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 9999999999999996543 488999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+
T Consensus 183 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----------~~~~~~~i~~~~~~~p 248 (340)
T PTZ00426 183 TR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE-----------PLLIYQKILEGIIYFP 248 (340)
T ss_pred CC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC-----------HHHHHHHHhcCCCCCC
Confidence 32 234578999999999998889999999999999999999999985322 1223333433332221
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
......+.+++.+|++.||++|+ +++++++
T Consensus 249 ------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 249 ------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 11223467888899999999995 8888865
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=328.98 Aligned_cols=266 Identities=24% Similarity=0.331 Sum_probs=202.2
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|++.+.||+|+||.||+|+.+ +++.||+|++..........+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36889999999999999999775 67889999987654444445678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS- 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 846 (964)
|++++.+..+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 9998777655432 24588899999999999999999999 99999999999999999999999999998764332
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC----CCCCCChhHHHHhhh------
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS----SLPGANMNEAIDHMF------ 916 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~------ 916 (964)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||......... ...+...........
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 2233456899999999999888999999999999999999999998643221100 000000000000000
Q ss_pred ccCCCCCcc-----ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 DARLPPPWL-----EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+.... ..........+.+++.+|+++||++|||++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 0001123456889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=337.36 Aligned_cols=252 Identities=20% Similarity=0.290 Sum_probs=203.5
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+.. +++.||||++..... .......+..|+.+++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999765 588999999875322 2233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 9999999999996543 478899999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc--cCCCCCc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--ARLPPPW 924 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 924 (964)
......|++.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+.. .....+.
T Consensus 154 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----------~~~~~~~i~~~~~~~~~~~ 221 (333)
T cd05600 154 -YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST-----------PNETWENLKYWKETLQRPV 221 (333)
T ss_pred -ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC-----------HHHHHHHHHhccccccCCC
Confidence 2234578999999999999999999999999999999999999985322 1222222211 1111111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..........++.+++.+|+..+|++||+++++++
T Consensus 222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 11101233456788889999999999999999985
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=312.35 Aligned_cols=247 Identities=28% Similarity=0.451 Sum_probs=212.6
Q ss_pred ccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|+++.+||+|+||.||+|.+ .+|+.||||++.. ..+.+++..|+.+|.+.+.|+||++||.+-....+|+|||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV----~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV----DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc----cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 66778899999999999955 4799999999863 345688999999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 849 (964)
..|+..|.++.+. .++.++++..++...+.||+|||.. .-||||||+.|||++.+|.+|++|||.|..+.+.-...
T Consensus 111 GAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR 186 (502)
T KOG0574|consen 111 GAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR 186 (502)
T ss_pred CCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence 9999999997544 5599999999999999999999999 88999999999999999999999999998887776777
Q ss_pred cccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccch
Q 037111 850 SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929 (964)
Q Consensus 850 ~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (964)
.++.|||.|||||++..-.|..++||||+|+...||..|++||....+.. .++-.+-.|+.--..+
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR--------------AIFMIPT~PPPTF~KP 252 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR--------------AIFMIPTKPPPTFKKP 252 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc--------------eeEeccCCCCCCCCCh
Confidence 88999999999999999999999999999999999999999987554422 1222222222222334
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 930 EDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 930 ~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+....++.+++.+|+-+.|++|-|+.++++
T Consensus 253 E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 253 EEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred HhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 667778899999999999999999988875
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=329.04 Aligned_cols=255 Identities=22% Similarity=0.357 Sum_probs=196.6
Q ss_pred hcccccceeecCCceeEEEEEeC--CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC---CCCceeeEEeeeec-----
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP--SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV---RHRNIVKFYGFCSH----- 758 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 758 (964)
++|++.+.||+|+||.||+|+.. +++.||+|++............+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36889999999999999999753 467899999875443333334566677766655 69999999999852
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
....++||||+. ++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999996 5999999776666689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
++..... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... +.+..+.+.
T Consensus 157 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-----------~~~~~i~~~ 224 (290)
T cd07862 157 ARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-----------DQLGKILDV 224 (290)
T ss_pred eEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-----------HHHHHHHHH
Confidence 9765433 2233456899999999998888999999999999999999999998643221 111111100
Q ss_pred ---------------------CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 ---------------------RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 ---------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..++........+....+.+++.+|++.||++|||+.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 225 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000000111123455678999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=331.72 Aligned_cols=260 Identities=23% Similarity=0.329 Sum_probs=203.3
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||.||+++.+ ++..||+|.+... ........+.+|++++++++||||+++++++..++..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 57999999999999999999765 6788999988643 233345679999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.... .+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 158 (331)
T cd06649 84 HMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (331)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccc-
Confidence 999999999996543 4888999999999999999999852 69999999999999999999999999987654322
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC------C-------------------
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS------S------------------- 902 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~------~------------------- 902 (964)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||......... .
T Consensus 159 -~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
T cd06649 159 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPG 237 (331)
T ss_pred -cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccc
Confidence 23456899999999999999999999999999999999999998532210000 0
Q ss_pred ----------CCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 903 ----------LPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 903 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+.....+..+.+.....+.. .......++.+++.+||..||++|||++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 238 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKL----PNGVFTPDFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred ccccccccccccchhHHHHHHHHHhCCCcCC----CCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000011111111111110 01123456889999999999999999999975
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=334.59 Aligned_cols=243 Identities=25% Similarity=0.364 Sum_probs=198.2
Q ss_pred ceeecCCceeEEEEEe----CCCCeEEEEEecccc--CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 695 FCIGRGGYGSVYKAEL----PSGDTVAVKKLHSFT--GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+.||+|+||.||+++. .+++.||+|+++... ........+.+|+.+++.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999965 357889999987432 1223345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.... .+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (323)
T cd05584 82 LSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV 156 (323)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc
Confidence 99999999996543 477888899999999999999999 9999999999999999999999999998754443333
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||... ...+....+.......+
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~-----------~~~~~~~~~~~~~~~~~----- 220 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE-----------NRKKTIDKILKGKLNLP----- 220 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCC-----------CHHHHHHHHHcCCCCCC-----
Confidence 34557899999999999888999999999999999999999998532 22334444444433321
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
......+.+++.+||++||++|| ++.++++
T Consensus 221 -~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 221 -PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 12234577889999999999999 7777764
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=320.42 Aligned_cols=259 Identities=24% Similarity=0.376 Sum_probs=211.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||+|... +|+.||+|.++.... .....+.+.+|++++++++|++++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999776 789999998864322 2333567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||+++|+|.+++... ....+++.++..++.+++.|++|||+. +++||||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998642 334588999999999999999999999 999999999999999999999999999876654
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........+++.|+|||.+.+..++.++|||||||++|+|++|+.||.... ....+..+.......++.
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~- 228 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---------MNLYSLCKKIEKCDYPPL- 228 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---------ccHHHHHhhhhcCCCCCC-
Confidence 4333344568889999999998889999999999999999999999975322 112222333222222211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
........+.+++.+||+.+|++||++.+|++.|+.
T Consensus 229 ---~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 229 ---PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred ---ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 112344568889999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=363.76 Aligned_cols=465 Identities=29% Similarity=0.314 Sum_probs=285.1
Q ss_pred ceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCC
Q 037111 85 HLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDG 164 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~ 164 (964)
++..|+++.|-+-...-+.+.+.-+|+.||||+|+++ .+|..+..+.+|+.|.++.|.+...+-+++++.+|++|.|.+
T Consensus 22 ~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~ 100 (1081)
T KOG0618|consen 22 ALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKN 100 (1081)
T ss_pred HHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHhhCchhhhhhhcchhheecc
Confidence 3666677776664322233444445777777777776 677777777777777777777776665677777777777777
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCCh
Q 037111 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244 (964)
Q Consensus 165 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 244 (964)
|.+. ..|.++..+++|++|++++|++. .+|..+..++.++.+..++|......+ ... ++.++|..|.+.+.++
T Consensus 101 n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg----~~~-ik~~~l~~n~l~~~~~ 173 (1081)
T KOG0618|consen 101 NRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLG----QTS-IKKLDLRLNVLGGSFL 173 (1081)
T ss_pred chhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhc----ccc-chhhhhhhhhcccchh
Confidence 7777 66777777777777777777776 667777777777777777772221222 222 6777777777777666
Q ss_pred hhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCc
Q 037111 245 QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS 324 (964)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 324 (964)
..+..++. .|+|+.|.+. . ..+..+.+|+.|....|+++.. --.-++|+.|+.++|.++...+ -....+
T Consensus 174 ~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~--~p~p~n 242 (1081)
T KOG0618|consen 174 IDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLTTLDV--HPVPLN 242 (1081)
T ss_pred cchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceE----EecCcchheeeeccCcceeecc--cccccc
Confidence 66666655 6777777766 2 2355666677777777766521 1223566667777776663221 122356
Q ss_pred ceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecc
Q 037111 325 LQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAG 404 (964)
Q Consensus 325 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~ 404 (964)
|+++++++|++++. |+++..+.+|+.++..+|.|+.. +.......+|+.|++.+|.+.-. +....++..|+.|+|..
T Consensus 243 l~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l~~l-p~ri~~~~~L~~l~~~~nel~yi-p~~le~~~sL~tLdL~~ 319 (1081)
T KOG0618|consen 243 LQYLDISHNNLSNL-PEWIGACANLEALNANHNRLVAL-PLRISRITSLVSLSAAYNELEYI-PPFLEGLKSLRTLDLQS 319 (1081)
T ss_pred ceeeecchhhhhcc-hHHHHhcccceEecccchhHHhh-HHHHhhhhhHHHHHhhhhhhhhC-CCcccccceeeeeeehh
Confidence 66777777666643 36666667777777777766433 33333445666666666666532 33344456666666666
Q ss_pred cccCCCCCCCCccccc-CcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCcccccc
Q 037111 405 NNITGGIPPEIGNATQ-LHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSI 483 (964)
Q Consensus 405 n~i~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 483 (964)
|+|....+..+..+.. |..|+.+.|++.......=...+.|+.|+|.+|.+++..-+.+.+..+|+.|+|++|++....
T Consensus 320 N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fp 399 (1081)
T KOG0618|consen 320 NNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFP 399 (1081)
T ss_pred ccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCC
Confidence 6666444433333333 556666666665322112223456666666666666655556666666666666666665444
Q ss_pred CCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccc
Q 037111 484 PGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMH 563 (964)
Q Consensus 484 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 563 (964)
...+.++..|++|+||+|+++ .+|..+..+..|+.|...+|+|. ..| .+..++.|+.+|+|.|+|+...-..-...+
T Consensus 400 as~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p 476 (1081)
T KOG0618|consen 400 ASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSP 476 (1081)
T ss_pred HHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCc
Confidence 445566666666666666665 45566666666666666666665 455 566666666666666666643222222236
Q ss_pred cceEEEecCCc
Q 037111 564 GLLSIDISYNE 574 (964)
Q Consensus 564 ~L~~l~ls~N~ 574 (964)
+|++|||++|.
T Consensus 477 ~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 477 NLKYLDLSGNT 487 (1081)
T ss_pred ccceeeccCCc
Confidence 66666666666
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=338.03 Aligned_cols=240 Identities=26% Similarity=0.327 Sum_probs=197.3
Q ss_pred ceeecCCceeEEEEEe----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEecc
Q 037111 695 FCIGRGGYGSVYKAEL----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLE 770 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (964)
+.||+|+||.||+++. .+|+.||+|++............+..|++++++++||||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999864 367899999987543333344567789999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcc
Q 037111 771 RGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850 (964)
Q Consensus 771 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 850 (964)
+|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCcee
Confidence 99999999654 3488999999999999999999999 999999999999999999999999999986654433344
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchH
Q 037111 851 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE 930 (964)
Q Consensus 851 ~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (964)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||... ...+....+.......+ .
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~-----------~~~~~~~~i~~~~~~~p------~ 219 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK-----------DRKETMTMILKAKLGMP------Q 219 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC-----------CHHHHHHHHHcCCCCCC------C
Confidence 567899999999999888999999999999999999999998532 22233344433333211 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHH
Q 037111 931 DKLKSIIEVALSCVDANPERRPNMQI 956 (964)
Q Consensus 931 ~~~~~l~~li~~cl~~dp~~RPs~~e 956 (964)
.....+.+++.+||++||++||++.+
T Consensus 220 ~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 220 FLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 23345778889999999999999655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=320.63 Aligned_cols=253 Identities=24% Similarity=0.402 Sum_probs=205.5
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|+..+.||+|+||.||+|..+ .++.||+|++... .....++.+|++.+++++||||+++++++..+...++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 46888899999999999999654 5888999998642 2335678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.|+++|++|||+. +++||||||+||++++++.+|++|||.+........
T Consensus 83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 99999999999776656689999999999999999999998 999999999999999999999999999976654322
Q ss_pred Cc-cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 848 NW-SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 848 ~~-~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.. ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.. ....+....+... ..++
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~-----------~~~~~~~~~~~~~-~~~~-- 225 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-----------IDLSQVYELLEKG-YRME-- 225 (263)
T ss_pred eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC-----------CCHHHHHHHHHCC-CCCC--
Confidence 11 12234568999999998899999999999999999998 8888642 1222222222221 1111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.....+..+.+++.+||..+|++||++.++++.|+.
T Consensus 226 --~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 226 --RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred --CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 112344668889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=319.40 Aligned_cols=251 Identities=24% Similarity=0.411 Sum_probs=203.9
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
.+|+..+.||+|+||.||+|+.+++..||+|.+.... .....+.+|+.++++++||||+++++++......++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc---ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 4688889999999999999988777789999886422 2346789999999999999999999999998899999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++..... .+++..+..++.||+.|++|||+. +++|+||||+||+++.++.+|++|||.++........
T Consensus 81 ~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 81 MSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred CCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 999999999976443 589999999999999999999999 9999999999999999999999999998765443221
Q ss_pred -ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 849 -WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 849 -~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.....++..|+|||...+..++.++||||||+++|||++ |+.||.... ..+....+.....+..
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~--- 222 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN-----------NSETVEKVSQGLRLYR--- 222 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC-----------HHHHHHHHhcCCCCCC---
Confidence 112235568999999988889999999999999999998 998975322 1222333322222111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+.+++.+||+.+|++||++.++++.|+
T Consensus 223 --~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 --PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0123456888999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=324.75 Aligned_cols=255 Identities=27% Similarity=0.481 Sum_probs=206.7
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
++|.+.+.||+|+||.||+|... +++.||||.++... .......+.+|+++++.++||||+++++++......
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 46888899999999999999763 34789999987532 233457899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc
Q 037111 763 FLVYEYLERGSLARILSSET------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE 830 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~ 830 (964)
++||||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 99999999999999997542 23478889999999999999999999 9999999999999999999
Q ss_pred eEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCC
Q 037111 831 AHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGAN 907 (964)
Q Consensus 831 ~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~ 907 (964)
+|++|||.+........ ......+++.|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~----------- 229 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS----------- 229 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC-----------
Confidence 99999999976533221 1123345678999999999999999999999999999998 999975221
Q ss_pred hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 908 MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..+..+.+.....+.. ....+..+.+++.+||..||++||++.||++.|+.
T Consensus 230 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 230 NEEVIECITQGRLLQR-----PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHHHHHcCCcCCC-----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 2233333333333221 12344568889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=295.65 Aligned_cols=258 Identities=22% Similarity=0.361 Sum_probs=203.9
Q ss_pred hcccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----cee
Q 037111 689 NNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 762 (964)
++|.+.+.+|+|+|+.||.++ ..+++.||+|++.- ...+..+..++|++..++++||||++++++...+ ...
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c--~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILC--HSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeec--cchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 479999999999999999995 55788999999873 3456678899999999999999999999987543 358
Q ss_pred EEEEEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 763 FLVYEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
|++++|...|+|.+.+... ++..+++.+++.|+.+|++||++||+. .++++||||||.||++.+++.+++.|||.++
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 9999999999999999753 344589999999999999999999998 3359999999999999999999999999997
Q ss_pred ccCCCCCC---------ccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCCh
Q 037111 841 LLKPDSSN---------WSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 841 ~~~~~~~~---------~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~ 908 (964)
...-.-.. ...-..|..|.|||.+. +...++++|||||||++|+|+.|..||+....-.++..
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla----- 252 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA----- 252 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE-----
Confidence 65422111 11234688999999886 44578899999999999999999999975443221110
Q ss_pred hHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
-.+..+.+.-| .....++.+.+++.+|+++||.+||++.+++..+.
T Consensus 253 ----LAv~n~q~s~P----~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 253 ----LAVQNAQISIP----NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred ----EeeeccccccC----CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 00111111111 01125567899999999999999999999998764
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-36 Score=319.46 Aligned_cols=254 Identities=25% Similarity=0.437 Sum_probs=207.2
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|++|.||+|...+++.||+|.++... ...+++.+|+.++++++||||+++++++...+..++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT---MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc---ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 45688999999999999999988778889999986432 234678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++.......+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 99999999999776555689999999999999999999999 999999999999999999999999999987653322
Q ss_pred Cc-cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 848 NW-SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 848 ~~-~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.. .....+..|+|||.+.+..++.++||||||+++|||++ |+.||... ...+....+.. ..+.+
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-----------~~~~~~~~~~~-~~~~~-- 224 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGM-----------TNAEVLQQVDQ-GYRMP-- 224 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCC-----------CHHHHHHHHHc-CCCCC--
Confidence 11 11223457999999998899999999999999999999 99887421 12222222211 11111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.....+..+.+++.+|++.+|++||+++++++.|+.
T Consensus 225 --~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 225 --CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred --CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 112344668889999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=332.52 Aligned_cols=246 Identities=26% Similarity=0.360 Sum_probs=196.5
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHH---hCCCCCceeeEEeeeecCceeEEE
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKAL---TGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
|++.+.||+|+||.||+|... +++.||||+++... ......+.+..|+.++ +.++||||+++++++.+.+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999999999654 68999999987432 1222334566666554 567899999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|..++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999998854 3489999999999999999999999 9999999999999999999999999998754443
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........|++.|+|||.+.+..++.++|||||||++|||++|+.||... ...+....+.......+
T Consensus 155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~-----------~~~~~~~~i~~~~~~~p-- 221 (324)
T cd05589 155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD-----------DEEEVFDSIVNDEVRYP-- 221 (324)
T ss_pred CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC-----------CHHHHHHHHHhCCCCCC--
Confidence 33344567999999999999999999999999999999999999998532 22233333333322211
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
......+.+++.+||+.||++|| ++.++++
T Consensus 222 ----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 222 ----RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 12345577889999999999999 4666554
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=327.41 Aligned_cols=256 Identities=21% Similarity=0.343 Sum_probs=197.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|+.+ +++.||||++..... ......+.+|+.+++.++||||+++++++.++...++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 367999999999999999999765 688999999864332 222346778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 83 EYVH-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred ECCC-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 9996 58888886543 3478889999999999999999999 99999999999999999999999999997654333
Q ss_pred CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc---c----
Q 037111 847 SNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---A---- 918 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~---- 918 (964)
.......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||...... .+....+.. .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----------~~~~~~~~~~~~~~~~~ 227 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI----------QDQLERIFLVLGTPNED 227 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH----------HHHHHHHHHHhCCCChh
Confidence 33345568899999998865 45888999999999999999999998643221 111111100 0
Q ss_pred ---------CCCCC-c---cccchH------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 ---------RLPPP-W---LEVGVE------DKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 ---------~~~~~-~---~~~~~~------~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+. . ...... .....+.+++.+|++.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 228 TWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000 0 000000 01235678889999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=337.63 Aligned_cols=257 Identities=22% Similarity=0.384 Sum_probs=202.9
Q ss_pred hhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 760 (964)
.++|++.+.||+|+||.||+|+.. .+..||||++... ......+.+.+|+.+++++. ||||+++++++.+..
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT-ARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC-CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 457889999999999999999652 2346999998643 23334567899999999996 999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcC----------------------------------------------------------
Q 037111 761 HSFLVYEYLERGSLARILSSET---------------------------------------------------------- 782 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 782 (964)
..|+||||+++|+|.+++....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 9999999999999999986421
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC
Q 037111 783 ------------------------------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD 826 (964)
Q Consensus 783 ------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~ 826 (964)
...+++..+..++.|+++|++|||+. +|+||||||+||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEe
Confidence 12477888899999999999999999 999999999999999
Q ss_pred CCCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCC
Q 037111 827 FEYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSL 903 (964)
Q Consensus 827 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~ 903 (964)
.++.+||+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~------ 345 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV------ 345 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch------
Confidence 999999999999976543322 1123346788999999998899999999999999999997 8888753211
Q ss_pred CCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 904 PGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..............+ .....+.++.+++.+||+.||++||++.+|.++|+.
T Consensus 346 -----~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 346 -----DSTFYNKIKSGYRMA----KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred -----hHHHHHHHhcCCCCC----CCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 111111111111111 112345678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=335.81 Aligned_cols=248 Identities=23% Similarity=0.371 Sum_probs=195.5
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|+..+.||+|+||.||+|+.. +++.||||++.... .......+.+|+++++.++|+||+++++++.+.+..++|||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 45677889999999999999764 68999999986432 33345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+.. ...+..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 153 ~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 153 FMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred cCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 99999986532 245677889999999999999999 999999999999999999999999999987654433
Q ss_pred Ccccccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 848 NWSELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
......|+..|+|||.+.. ...+.++|||||||++|||++|+.||..... .........+.....+.
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~ 295 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--------GDWASLMCAICMSQPPE 295 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--------ccHHHHHHHHhccCCCC
Confidence 3345678999999998743 2345689999999999999999999862211 11112222211111111
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......++.+++.+||+.||++||++.|+++
T Consensus 296 -----~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 296 -----APATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred -----CCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11234456888999999999999999999986
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=328.59 Aligned_cols=250 Identities=25% Similarity=0.431 Sum_probs=207.4
Q ss_pred cccccceeecCCceeEEEEEeC---CCC--eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP---SGD--TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~---~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
.....++||+|-||.||+|.+. .|+ .||||.-+..+ ..+..+.|++|..+|+.++||||++++|+|.+ ...|+
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 4556778999999999999653 233 48889877533 44557899999999999999999999999976 57899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|||.++-|.|..|++.+.. .++......++.||..||+|||+. .+|||||.++|||+....-||++|||+++.+.+
T Consensus 468 vmEL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EEecccchhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 9999999999999986554 488899999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCcc-ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhh-ccCCC
Q 037111 845 DSSNWS-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMF-DARLP 921 (964)
Q Consensus 845 ~~~~~~-~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 921 (964)
..+... ...-+..|||||.+.-++++.+||||-|||.+||++. |..||..... .+.+.++- ++++|
T Consensus 544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN-----------sDVI~~iEnGeRlP 612 (974)
T KOG4257|consen 544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN-----------SDVIGHIENGERLP 612 (974)
T ss_pred cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc-----------cceEEEecCCCCCC
Confidence 754433 2334668999999999999999999999999999986 9999763322 22222222 23444
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.| +.|+..++.++.+||..+|.+||++.++...|+
T Consensus 613 ~P------~nCPp~LYslmskcWayeP~kRPrftei~~~ls 647 (974)
T KOG4257|consen 613 CP------PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILS 647 (974)
T ss_pred CC------CCCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence 33 467888999999999999999999999998774
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=320.11 Aligned_cols=254 Identities=26% Similarity=0.457 Sum_probs=205.6
Q ss_pred hcccccceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|+..+.||+|+||.||+|.++. ...||||.++... .......+.+|+..+++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 568899999999999999997642 4579999886432 33445678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++..... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.++++|||++.....
T Consensus 83 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLRENDG-KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 9999999999999976443 588999999999999999999998 999999999999999999999999999987752
Q ss_pred CCCCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 845 DSSNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 845 ~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
..... ....+++.|+|||.+.+..++.++||||||+++|||++ |..||.... ..+....+......
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~-----------~~~~~~~~~~~~~~ 227 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS-----------NQDVIKAVEDGYRL 227 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC-----------HHHHHHHHHcCCCC
Confidence 22211 12234678999999998899999999999999999998 998874221 12233333222111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
+. ...++..+.+++.+||+.+|++||++++|++.|+.
T Consensus 228 ~~-----~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 228 PP-----PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred CC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11 12345668899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=323.10 Aligned_cols=257 Identities=20% Similarity=0.370 Sum_probs=204.2
Q ss_pred HhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
..++|+..+.||+|+||.||+|..+ ++..||||++.... ......++.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4567999999999999999998653 34679999986422 2334567889999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceE
Q 037111 761 HSFLVYEYLERGSLARILSSET--------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH 832 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~k 832 (964)
..++||||+++|+|.+++.... ....++..+..++.|++.|++|||+. +++||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEE
Confidence 9999999999999999996532 12357788999999999999999998 999999999999999999999
Q ss_pred EeccCcccccCCCCCCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChh
Q 037111 833 VSDFGTAKLLKPDSSNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMN 909 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~ 909 (964)
++|||+++......... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||... ...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~-----------~~~ 228 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM-----------SNE 228 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC-----------CHH
Confidence 99999987654332211 12345678999999998889999999999999999999 67886421 222
Q ss_pred HHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 910 EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
+....+.....+.. ....+..+.+++.+||+.+|++||++.|+++.|++
T Consensus 229 ~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 229 QVLRFVMEGGLLDK-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHHHcCCcCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 33333322222211 11234568889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=311.95 Aligned_cols=265 Identities=24% Similarity=0.358 Sum_probs=204.2
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-----Ccee
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-----ARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~ 762 (964)
..|...+.||+|+||.|+.+.. .+|+.||||++...-......+...+|+..++.++|+||+.+++.+.. -...
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 3455578899999999999954 479999999998666666677888999999999999999999999865 3578
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+|+|+|+. +|...++.+. .++...+..+++|+++|+.|+|+. +|+|||+||.|++++.+..+||+|||+|+..
T Consensus 102 YiV~elMet-DL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 102 YLVFELMET-DLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYL 175 (359)
T ss_pred EEehhHHhh-HHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeec
Confidence 999999954 9999996544 388899999999999999999999 9999999999999999999999999999987
Q ss_pred CCC--CCCccccccccccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC----CCCCCChhHHHHhh
Q 037111 843 KPD--SSNWSELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS----SLPGANMNEAIDHM 915 (964)
Q Consensus 843 ~~~--~~~~~~~~g~~~y~aPE~~~-~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~ 915 (964)
... ....++.+.|..|.|||.+. ...|+.+.||||.||++.||++|+.-|......... ...+....+.+..+
T Consensus 176 ~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i 255 (359)
T KOG0660|consen 176 DKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKI 255 (359)
T ss_pred cccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHh
Confidence 642 33346678899999999875 467999999999999999999999887533321100 00011111111111
Q ss_pred ---------h-ccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 ---------F-DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 ---------~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. -+..++..............++++.+|+..||.+|+|++|.++
T Consensus 256 ~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 256 RSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred ccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1 1112221112222233345678888999999999999999875
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=309.35 Aligned_cols=254 Identities=22% Similarity=0.286 Sum_probs=213.4
Q ss_pred hhcccccceeecCCceeEEEEEeCC-CCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.+.|+..+.||+|.-|+||.++..+ +..+|+|++.+... .......+..|-++++.++||.++++|+.|+.++..|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 3467788899999999999998763 58899999975432 244456788899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC-
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP- 844 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~- 844 (964)
||||+||+|....+++....+++..++.++.+++-||+|||.. |||.|||||+|||+.++|++.++||.++.....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999998743210
Q ss_pred --------------------------------CCC-----------------------CccccccccccccccccccCCC
Q 037111 845 --------------------------------DSS-----------------------NWSELAGTYGYVAPELAYTMKV 869 (964)
Q Consensus 845 --------------------------------~~~-----------------------~~~~~~g~~~y~aPE~~~~~~~ 869 (964)
... .....+||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 000 0012468899999999999999
Q ss_pred CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCC
Q 037111 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPE 949 (964)
Q Consensus 870 ~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 949 (964)
+.++|+|+|||++|||+.|..||. +...++.+..++.....-+.. ........+||.+.+.+||.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFK-----------G~~~~~Tl~NIv~~~l~Fp~~----~~vs~~akDLIr~LLvKdP~ 377 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFK-----------GSNNKETLRNIVGQPLKFPEE----PEVSSAAKDLIRKLLVKDPS 377 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcC-----------CCCchhhHHHHhcCCCcCCCC----CcchhHHHHHHHHHhccChh
Confidence 999999999999999999999964 555667788887766654322 14445677888899999999
Q ss_pred CCCC----HHHHHH
Q 037111 950 RRPN----MQIVCK 959 (964)
Q Consensus 950 ~RPs----~~evl~ 959 (964)
+|.. ++||.+
T Consensus 378 kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 378 KRLGSKRGAAEIKR 391 (459)
T ss_pred hhhccccchHHhhc
Confidence 9998 677653
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=340.03 Aligned_cols=250 Identities=24% Similarity=0.351 Sum_probs=204.7
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||+||+|+.. +++.||||++..... .......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36889999999999999999765 789999999875322 2234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999765 4588999999999999999999998 99999999999999999999999999998665433
Q ss_pred -----------------------------CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 037111 847 -----------------------------SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSS 897 (964)
Q Consensus 847 -----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~ 897 (964)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~- 234 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT- 234 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC-
Confidence 12234568999999999999999999999999999999999999985322
Q ss_pred ccCCCCCCCChhHHHHhhhc--cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 037111 898 LSDSSLPGANMNEAIDHMFD--ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCK 959 (964)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-~~evl~ 959 (964)
..+....+.. .....+.. .....++.+++.+|+. ||++||+ ++++++
T Consensus 235 ----------~~~~~~~i~~~~~~~~~p~~----~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 235 ----------LQETYNKIINWKESLRFPPD----PPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred ----------HHHHHHHHhccCCcccCCCC----CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 2222333322 11111111 1134567888889997 9999999 999986
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=331.83 Aligned_cols=250 Identities=22% Similarity=0.322 Sum_probs=197.4
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|+.+ +++.||+|+++... ........+..|..++.++ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999764 68899999987532 2233345678899999888 699999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST 155 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccc
Confidence 9999998654 3589999999999999999999999 9999999999999999999999999998754333333445
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChh-HHHHhhhccCCCCCccccchH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN-EAIDHMFDARLPPPWLEVGVE 930 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 930 (964)
..|++.|+|||++.+..++.++||||+||++|||++|+.||+....... +..... .....+.......+ .
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p------~ 226 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN---PDQNTEDYLFQVILEKQIRIP------R 226 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccc---ccccchHHHHHHHHcCCCCCC------C
Confidence 6789999999999999999999999999999999999999974332111 111111 12222333322211 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC------HHHHH
Q 037111 931 DKLKSIIEVALSCVDANPERRPN------MQIVC 958 (964)
Q Consensus 931 ~~~~~l~~li~~cl~~dp~~RPs------~~evl 958 (964)
....++.+++.+|++.||++||+ +++++
T Consensus 227 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 227 SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 22345778888999999999997 56665
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=334.33 Aligned_cols=243 Identities=21% Similarity=0.280 Sum_probs=197.2
Q ss_pred ceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 695 FCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
+.||+|+||.||++.. .+++.||+|++.... ........+..|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999965 478899999987532 12233456788999999999999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
+|.+++... ..+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 155 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccc
Confidence 999998654 348899999999999999999997 6 9999999999999999999999999998754433333345
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||++.+..++.++|||||||++|||++|+.||... ...+....+.......+ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~-----------~~~~~~~~i~~~~~~~p------~~ 218 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----------DHEKLFELILMEEIRFP------RT 218 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCC-----------CHHHHHHHHhcCCCCCC------CC
Confidence 57999999999999999999999999999999999999998521 12233333332222211 12
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 932 KLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
...++.+++.+||+.||++|+ +++++++
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 219 LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 234577888899999999997 8888864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=322.36 Aligned_cols=256 Identities=23% Similarity=0.406 Sum_probs=204.3
Q ss_pred hhcccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.++|+..+.||+|+||.||+|.. .++..||+|.+.... .......+.+|+.++++++||||+++++++..+...
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 35688899999999999999964 356789999987432 334456788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC---------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC
Q 037111 763 FLVYEYLERGSLARILSSET---------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~ 827 (964)
|+||||+++|+|.+++.... ...+++.++..++.|++.|++|||++ +++||||||+||+++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC
Confidence 99999999999999985322 23478888999999999999999999 9999999999999999
Q ss_pred CCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCC
Q 037111 828 EYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 828 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~ 904 (964)
++.+|++|||+++....... ......++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~-------- 231 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS-------- 231 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--------
Confidence 99999999999976543321 1223345678999999988889999999999999999998 888874211
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..+..+.+......+. ...++.++.+++.+||++||++||++.+|.+.|++
T Consensus 232 ---~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 232 ---NQEVIEMVRKRQLLPC-----SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHHHHHHHHcCCcCCC-----CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1222222222222111 12234567888999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=318.27 Aligned_cols=252 Identities=23% Similarity=0.424 Sum_probs=205.6
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|..++++.||+|.+.... .....+.+|+.++++++||||+++++++. .+..++|||
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS---MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE 80 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC---CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence 35788999999999999999998889999999986432 23467889999999999999999999874 457899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 81 YMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred cCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 99999999999776666789999999999999999999998 999999999999999999999999999976653322
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
......++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+....+... .+.+.
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----------~~~~~~~~~~~-~~~~~- 224 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT-----------NPEVIQNLERG-YRMPR- 224 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC-----------hHHHHHHHHcC-CCCCC-
Confidence 1223345678999999988889999999999999999999 999975221 12222222221 11111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+.++.+++.+||+.+|++||+++++.+.|+
T Consensus 225 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 225 ---PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred ---CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 1223456888999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=331.10 Aligned_cols=246 Identities=23% Similarity=0.338 Sum_probs=193.9
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|+.+ +++.||+|+++... ........+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999764 67899999987532 2233445677888888776 799999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 155 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccc
Confidence 9999988654 3488999999999999999999999 9999999999999999999999999999764433333345
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChh-HHHHhhhccCCCCCccccchH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN-EAIDHMFDARLPPPWLEVGVE 930 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 930 (964)
..|++.|+|||++.+..++.++|||||||++|||++|+.||........ +..... .....+.......+ .
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~---~~~~~~~~~~~~i~~~~~~~p------~ 226 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN---PDQNTEDYLFQVILEKQIRIP------R 226 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCC---cccccHHHHHHHHhcCCCCCC------C
Confidence 6789999999999999999999999999999999999999964322111 111111 22222223222211 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCH
Q 037111 931 DKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 931 ~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
.....+.+++.+||+.||++||++
T Consensus 227 ~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 227 SLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCHHHHHHHHHHhcCCHHHcCCC
Confidence 233457788889999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=330.94 Aligned_cols=238 Identities=24% Similarity=0.364 Sum_probs=194.1
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|+.+ +++.||||++.... ........+..|..++... +||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999765 68899999986432 1223345677888888766 699999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++............
T Consensus 81 g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (320)
T cd05590 81 GDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST 155 (320)
T ss_pred chHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccc
Confidence 99999986543 488999999999999999999999 9999999999999999999999999998765433333445
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||.+.+..++.++||||+||++|||++|+.||... ...+....+.......+ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~-----------~~~~~~~~i~~~~~~~~------~~ 218 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE-----------NEDDLFEAILNDEVVYP------TW 218 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC-----------CHHHHHHHHhcCCCCCC------CC
Confidence 67999999999999989999999999999999999999998532 22334444444333221 11
Q ss_pred HHHHHHHHHHHccCCCCCCCCCH
Q 037111 932 KLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
...++.+++.+|++.||++||++
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 219 LSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCHHHHHHHHHHcccCHHHCCCC
Confidence 33457788889999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=342.14 Aligned_cols=251 Identities=23% Similarity=0.379 Sum_probs=204.5
Q ss_pred hcccccceeecCCceeEEEEEeCCC-CeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEee-eec------C
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSG-DTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGF-CSH------A 759 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------~ 759 (964)
.++++.++|.+|||+.||.|+...+ .+||+|++... ++.....+.+||++|+.++ |||||.+++. ... .
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 3577888999999999999976655 99999998753 5666788999999999997 9999999993 211 2
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
-++++.||||+||.|-|++..+-...+++.++++|++++++|+++||.. +++|||||||-+|||+..++..||||||.|
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 3678999999999999999876666699999999999999999999998 668999999999999999999999999999
Q ss_pred cccCCCCCCcc---------cccccccccccccc---ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCC
Q 037111 840 KLLKPDSSNWS---------ELAGTYGYVAPELA---YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGAN 907 (964)
Q Consensus 840 ~~~~~~~~~~~---------~~~g~~~y~aPE~~---~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~ 907 (964)
........... ...-|+.|+|||.+ .+.++++|+||||+||+||-++....||+.....
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--------- 264 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--------- 264 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---------
Confidence 75443321111 22468999999986 4677999999999999999999999999854331
Q ss_pred hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 908 MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
.++...+.-| ........+..||..||.+||++||++-+|++.+
T Consensus 265 ------aIlng~Y~~P----~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 265 ------AILNGNYSFP----PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred ------eEEeccccCC----CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 1222222211 1135666788899999999999999999998865
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=344.48 Aligned_cols=249 Identities=21% Similarity=0.256 Sum_probs=202.9
Q ss_pred cccccceeecCCceeEEEEEeC-C-CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-S-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.|...+.||+|+||.||+|... + ++.||+|.+... .......+..|+.+++.++||||+++++++..++..|+|||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 4889999999999999999543 3 577888876432 33334567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 768 YLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 768 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|+++|+|.+++... ...++++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999999988642 334588899999999999999999999 9999999999999999999999999999876543
Q ss_pred CC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 846 SS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 846 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+....+.....++.
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~-----------~~~~~~~~~~~~~~~~~ 291 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP-----------SQREIMQQVLYGKYDPF 291 (478)
T ss_pred cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-----------CHHHHHHHHHhCCCCCC
Confidence 22 223456899999999999999999999999999999999999997521 22334444433333221
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......++.+++.+||..||++||++++++.
T Consensus 292 -----~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 292 -----PCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -----CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1123356788899999999999999999864
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=319.99 Aligned_cols=259 Identities=24% Similarity=0.377 Sum_probs=209.3
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||+|.. .+++.||||.+.... .......++.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999975 578999999876432 23334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||+++++|.+++... ....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998642 234588999999999999999999999 999999999999999999999999999877654
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ........+.....++.
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~- 228 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---------NLYSLCKKIEQCDYPPL- 228 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc---------hHHHHhhhhhcCCCCCC-
Confidence 43333445688899999999988899999999999999999999999752211 11122222222222211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
........+.+++.+||+.+|++|||+.+|++.++.
T Consensus 229 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 229 ---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred ---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 112345568889999999999999999999988763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=315.92 Aligned_cols=249 Identities=24% Similarity=0.394 Sum_probs=217.7
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.-|+..+.||+|.|++|-.|++ -+|.+||||++.+...+......+.+|++.|+-++|||||++|++......+|+|+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 4577788899999999999954 379999999998887777788899999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceEEeccCcccccCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~ 846 (964)
.-.+|+|+||+-++.. .+.+....+++.||+.|+.|+|+. .+||||+||+||.+.+ -|-||+.|||++..+.++.
T Consensus 98 LGD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~ 173 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK 173 (864)
T ss_pred ecCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCcc
Confidence 9999999999976554 388899999999999999999999 8999999999998855 5899999999998877654
Q ss_pred CCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
...+.+|+..|-|||++.+..|+ +++||||+|||+|-+++|+.||+. .+..+.+..+++.++.-|
T Consensus 174 -kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqe-----------ANDSETLTmImDCKYtvP-- 239 (864)
T KOG4717|consen 174 -KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQE-----------ANDSETLTMIMDCKYTVP-- 239 (864)
T ss_pred -hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccc-----------ccchhhhhhhhcccccCc--
Confidence 45677999999999999999987 478999999999999999999763 333466777777766543
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....++.++|..|+..||.+|.+.++|+.
T Consensus 240 ----shvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 240 ----SHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ----hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 456677888999999999999999999874
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=345.00 Aligned_cols=254 Identities=24% Similarity=0.319 Sum_probs=206.8
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-----
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----- 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 760 (964)
..++|++.+.||+|+||+||+|+. .+++.||||++............+.+|+..+..++|+|++++++.+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 346899999999999999999964 47899999998755444555677889999999999999999988775432
Q ss_pred ---eeEEEEEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEec
Q 037111 761 ---HSFLVYEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSD 835 (964)
Q Consensus 761 ---~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~D 835 (964)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 368999999999999999653 234688999999999999999999999 999999999999999999999999
Q ss_pred cCcccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 836 FGTAKLLKPDS--SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 836 fg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+.+.
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~-----------~~~~~~~~ 255 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG-----------ENMEEVMH 255 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----------CCHHHHHH
Confidence 99998654332 222345789999999999999999999999999999999999999852 22234444
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......++. ......++.+++.+||+.||++||++.++++
T Consensus 256 ~~~~~~~~~~-----~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 256 KTLAGRYDPL-----PPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred HHhcCCCCCC-----CCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 4443333221 1223456888999999999999999999875
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=311.79 Aligned_cols=259 Identities=26% Similarity=0.369 Sum_probs=195.9
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-----eeE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-----HSF 763 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 763 (964)
.|+..+++|.|+||.||+|... +++.||||++-.... .-.+|+.+|+.++|||||++.-+|.... ...
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 5778899999999999999654 578999999753221 2236999999999999999999886532 346
Q ss_pred EEEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccCccc
Q 037111 764 LVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAK 840 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~a~ 840 (964)
+|||||+. +|.++++. .....++.-.++-++.||++|++|||+. +|+||||||.|+|+|.+ |.+||||||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999987 99999974 2345588888899999999999999998 99999999999999987 899999999999
Q ss_pred ccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCC----CCCCCChhHHHHhh
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS----SLPGANMNEAIDHM 915 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~ 915 (964)
...+..... ....+..|+|||.+.+. .|+.+.||||.||++.||+-|++-|...+..... ..-+....+.+..+
T Consensus 175 ~L~~~epni-SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 175 VLVKGEPNI-SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred eeccCCCce-eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 887766553 34567889999999875 5999999999999999999999887532221100 00000011111111
Q ss_pred -------hccCCC-CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 -------FDARLP-PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 -------~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+.+. .+|..........+.++++.+++..+|.+|.++.|++.
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 111222 22222234455667899999999999999999998864
|
|
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=322.68 Aligned_cols=247 Identities=23% Similarity=0.287 Sum_probs=196.5
Q ss_pred eecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCH
Q 037111 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL 774 (964)
Q Consensus 697 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 774 (964)
||+|+||+||++..+ +++.||+|++..... .......+..|+.+++.++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999654 688999999864322 222335677899999999999999999999999999999999999999
Q ss_pred HHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccc
Q 037111 775 ARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852 (964)
Q Consensus 775 ~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 852 (964)
.+++... ....+++..+..++.||+.|++|||+. +|+||||||+||+++.++.++|+|||.+.............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 9887542 334588999999999999999999999 99999999999999999999999999997665544434455
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHH
Q 037111 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDK 932 (964)
Q Consensus 853 ~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (964)
.|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ....+............ ....
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~------~~~~ 224 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-------VENKELKQRILNDSVTY------PDKF 224 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc-------hhHHHHHHhhcccCCCC------cccC
Confidence 7899999999999999999999999999999999999998632210 01112222222221111 1234
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 933 LKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 933 ~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
+..+.+++.+||+.||++|| +++++++
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 225 SPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 45678888999999999999 6677664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=334.51 Aligned_cols=257 Identities=17% Similarity=0.256 Sum_probs=197.2
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|+..+.||+|+||.||+|.. .+++.||+|+.. ...+.+|+.++++++||||+++++++......++|+|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e 163 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP 163 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence 5799999999999999999965 478899999743 2346789999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC-C
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD-S 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-~ 846 (964)
++. ++|.+++... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+..... .
T Consensus 164 ~~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 164 RYK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred cCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence 995 6999988654 3488999999999999999999999 9999999999999999999999999999754322 2
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCC------------------CCh
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG------------------ANM 908 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~------------------~~~ 908 (964)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||............. ...
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~ 317 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA 317 (391)
T ss_pred cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence 22334579999999999999999999999999999999999998864322111000000 000
Q ss_pred hHHHHhhh----ccCC-CC--CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 909 NEAIDHMF----DARL-PP--PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 909 ~~~~~~~~----~~~~-~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+ .... .+ ..........+.++.+++.+||+.||++|||++|+++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00111110 0000 00 0001112234567889999999999999999999975
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=328.03 Aligned_cols=242 Identities=26% Similarity=0.367 Sum_probs=192.0
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhC-CCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTG-VRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|+.. +++.||+|+++... ........+..|..++.. .+||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999764 57889999987532 122233445566666654 4899999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~ 155 (316)
T cd05592 81 GDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccc
Confidence 99999996543 488899999999999999999999 9999999999999999999999999999765443334445
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..||+.|+|||.+.+..++.++|||||||++|||++|+.||... ...+....+.......+ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~-----------~~~~~~~~i~~~~~~~~------~~ 218 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE-----------DEDELFDSILNDRPHFP------RW 218 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC-----------CHHHHHHHHHcCCCCCC------CC
Confidence 67999999999999989999999999999999999999998532 22233333332221111 12
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 037111 932 KLKSIIEVALSCVDANPERRPNMQ-IVC 958 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~~-evl 958 (964)
...++.+++.+||+.||++||++. ++.
T Consensus 219 ~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 219 ISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 334567888899999999999875 443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=329.78 Aligned_cols=199 Identities=25% Similarity=0.385 Sum_probs=173.6
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|++.+.||+|+||.||+|..+ ++..||+|.+.... .......+.+|++++++++||||++++++|.+++..++|||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 57999999999999999999765 67889999876432 33345678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.... .+++..+..++.|++.|++|||+.. +++||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~- 158 (333)
T cd06650 84 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (333)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc-
Confidence 999999999996543 4788899999999999999999742 79999999999999999999999999987653321
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 159 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred -cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2234688999999999988899999999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=316.80 Aligned_cols=251 Identities=26% Similarity=0.442 Sum_probs=203.8
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|++.+.||+|+||.||+|+.++...||+|++.... .....+.+|++++++++||||+++++++.. ...++||||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~ 81 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 81 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc---cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEc
Confidence 4689999999999999999988777789999986422 223578899999999999999999998754 568999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.......+++..+..++.|+++||+|+|+. +++||||||+||+++.++.++|+|||.++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~ 158 (262)
T cd05071 82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 158 (262)
T ss_pred CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence 9999999999765555688999999999999999999999 9999999999999999999999999999766543322
Q ss_pred -ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 849 -WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 849 -~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.....++..|+|||...+..++.++||||||+++|||+| |+.||.... ..+....+.... +.+
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~-----------~~~~~~~~~~~~-~~~--- 223 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----------NREVLDQVERGY-RMP--- 223 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----------hHHHHHHHhcCC-CCC---
Confidence 123345678999999988889999999999999999999 777864221 122223222211 111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+.+..+.+++.+|++++|++||++.+++++|+
T Consensus 224 -~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 224 -CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred -CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 11345567889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=330.42 Aligned_cols=243 Identities=23% Similarity=0.344 Sum_probs=197.0
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|+.+ +++.||+|++.... ........+..|.+++..+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999765 57899999986532 1233345677888888765 799999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++............
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT 155 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCccccc
Confidence 9999998654 3488899999999999999999999 9999999999999999999999999998765444333445
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||++.+..++.++||||+||++|||++|+.||... ...+....+.......+. .
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~-----------~~~~~~~~i~~~~~~~p~------~ 218 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD-----------NEDDLFESILHDDVLYPV------W 218 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC-----------CHHHHHHHHHcCCCCCCC------C
Confidence 67899999999999989999999999999999999999998532 223444444443332211 1
Q ss_pred HHHHHHHHHHHccCCCCCCCC-------CHHHHHH
Q 037111 932 KLKSIIEVALSCVDANPERRP-------NMQIVCK 959 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RP-------s~~evl~ 959 (964)
...++.+++.+|++.||++|| +++++++
T Consensus 219 ~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 219 LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 234577888999999999999 7777764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-36 Score=329.51 Aligned_cols=243 Identities=22% Similarity=0.333 Sum_probs=196.6
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCC-CceeeEEeeeecCceeEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRH-RNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 766 (964)
+|++.+.||+|+||.||+|+.+ +++.||||++.... ........+..|+.++..++| ++|+++++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999765 57789999987432 123345677889999998875 56889999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 9999999999996543 478899999999999999999999 99999999999999999999999999987543333
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.......|++.|+|||++.+..++.++||||+||++|||+||+.||... ...+....+.......+
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~-----------~~~~~~~~i~~~~~~~~--- 221 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE-----------DEDELFQSIMEHNVSYP--- 221 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC-----------CHHHHHHHHHcCCCCCC---
Confidence 3334567899999999999999999999999999999999999998532 22233344433332211
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
.....++.+++.+|+++||++|++.
T Consensus 222 ---~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 222 ---KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ---CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1233457788899999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=314.53 Aligned_cols=253 Identities=22% Similarity=0.337 Sum_probs=212.0
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|+||.||.++. .+++.|++|++............+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478899999999999999954 4688999999875544455567889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 157 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM 157 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccccc
Confidence 9999999999876556689999999999999999999998 9999999999999999999999999999876554433
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....+++.|+|||...+..++.++||||||+++|||++|+.||... ...+....+.....++.
T Consensus 158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~----- 221 (256)
T cd08221 158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT-----------NPLNLVVKIVQGNYTPV----- 221 (256)
T ss_pred ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC-----------CHHHHHHHHHcCCCCCC-----
Confidence 44567899999999998888999999999999999999999997521 22234444443333322
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
......++.+++.+||+.+|++||++.++++.+
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 222 VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 123455688899999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=316.17 Aligned_cols=253 Identities=27% Similarity=0.449 Sum_probs=205.4
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|++.+.||+|+||.||+|..+++..||+|.+..... ....+.+|+.++++++||+++++++++.. ...++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e 80 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM---SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTE 80 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC---CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEE
Confidence 457889999999999999999888888999999864322 23568899999999999999999998854 56899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++.......+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||.+........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 99999999999776555689999999999999999999999 999999999999999999999999999976654322
Q ss_pred C-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 848 N-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 848 ~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
. .....++..|+|||...+..++.++||||||+++|||++ |..||... ...+..+.+... .+.+.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~-----------~~~~~~~~~~~~-~~~~~- 224 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM-----------NNREVLEQVERG-YRMPC- 224 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC-----------CHHHHHHHHHcC-CCCCC-
Confidence 1 122345668999999988889999999999999999999 88887421 122233333221 11111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+..+.+++.+|+.++|++|||++++.++|+.
T Consensus 225 ---~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 ---PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 12344568899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=315.91 Aligned_cols=251 Identities=21% Similarity=0.331 Sum_probs=207.1
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|+||.||+++.+ +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 4788899999999999999665 68899999986432 233456788899999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.......+++..+..++.|++.|+.|||++ +++|+||||+||++++++.++++|||.+.........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 156 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY 156 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence 9999999998765556688999999999999999999999 9999999999999999999999999999766544433
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....+++.|+|||++.+..++.++||||||+++|+|++|+.||... ........+......+.
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~----- 220 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN-----------SWKNLILKVCQGSYKPL----- 220 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC-----------CHHHHHHHHhcCCCCCC-----
Confidence 34567889999999999888999999999999999999999998532 12222333322222211
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
.......+.+++.+||+.||++||++.+++..
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11233457888999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=327.45 Aligned_cols=252 Identities=23% Similarity=0.403 Sum_probs=199.3
Q ss_pred hcccccceeecCCceeEEEEEeC-CCC----eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.+|+..+.||+|+||.||+|++. +++ .||+|.++.. ......+++.+|+.+++.++||||++++|++... ..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 46899999999999999999754 333 3899998642 2334456788999999999999999999999765 578
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+|+||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccccc
Confidence 9999999999999997643 3478889999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
...... ....++..|+|||.+.+..++.++|||||||++|||++ |+.||+... ..+ +..+.....
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~-----------~~~-~~~~~~~~~ 228 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----------ASE-ISSILEKGE 228 (316)
T ss_pred CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-----------HHH-HHHHHhCCC
Confidence 443222 12234668999999999999999999999999999998 999975321 111 122221111
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+. ...+..++.+++.+||..+|++||++.+++..+.
T Consensus 229 ~~~~----~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 229 RLPQ----PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred CCCC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111 0123346788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=321.37 Aligned_cols=254 Identities=28% Similarity=0.464 Sum_probs=204.1
Q ss_pred hhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|.+.+.||+|+||.||++.. .++..||+|.+... .......+.+|++++++++||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 35788899999999999999964 23456899988642 23345678999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc
Q 037111 762 SFLVYEYLERGSLARILSSET-----------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE 830 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~ 830 (964)
.++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999999997532 23489999999999999999999999 9999999999999999999
Q ss_pred eEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCC
Q 037111 831 AHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGAN 907 (964)
Q Consensus 831 ~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~ 907 (964)
++|+|||.++........ .....+++.|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~----------- 227 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS----------- 227 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----------
Confidence 999999999765433211 122345678999999998889999999999999999998 888875222
Q ss_pred hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 908 MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+....+........ ....+.++.+++.+||++||.+|||+.+|.+.|+
T Consensus 228 ~~~~~~~i~~~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 228 NNEVIECITQGRVLQR-----PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred HHHHHHHHHcCCcCCC-----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 2233333333322211 1123456889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=322.78 Aligned_cols=253 Identities=23% Similarity=0.274 Sum_probs=201.8
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.|+..+.||+|+||.||++.. .+++.||+|++..... .......+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 478889999999999999975 4688999999864322 22223557789999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 99999999998765555689999999999999999999999 99999999999999999999999999997654322
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......|++.|+|||.+.+..++.++||||+||++|||++|+.||..... .....+....+......
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~------ 223 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE-------KVKREEVERRVKEDQEE------ 223 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch-------hhHHHHHHHHhhhcccc------
Confidence 22344689999999999988899999999999999999999999863211 00011111111111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
........+.+++.+||+.||++|| +++++++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 224 YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 1123445678899999999999999 7888754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=328.85 Aligned_cols=243 Identities=22% Similarity=0.338 Sum_probs=197.2
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (964)
+|++.+.||+|+||.||+|+.+ +++.||+|.+..... .......+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999765 578999999875321 222334567788887776 5899999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 9999999999986543 488899999999999999999999 99999999999999999999999999997654333
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.......|++.|+|||++.+..++.++|||||||++|||+||+.||... ...+....+.......+
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~-----------~~~~~~~~i~~~~~~~p--- 221 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----------DEDELFQSIMEHNVAYP--- 221 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCC-----------CHHHHHHHHHhCCCCCC---
Confidence 3344567899999999999999999999999999999999999998532 22333444443333222
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
.....++.+++.+|++.||++|++.
T Consensus 222 ---~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 222 ---KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ---CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1234567788899999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=315.78 Aligned_cols=251 Identities=25% Similarity=0.423 Sum_probs=202.2
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
.+|++.+.||+|+||.||+|..+++..+|+|.+.... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA---MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 3588889999999999999988877889999986422 2235688899999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++++|.+++..... .+++..+..++.|+++|++|||+. +++||||||+||+++.++.+|++|||.++........
T Consensus 81 ~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 81 MANGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred CCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 999999999975443 588999999999999999999999 9999999999999999999999999999765433211
Q ss_pred c-cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 849 W-SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 849 ~-~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
. ....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+....+... .....
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----------~~~~~~~~~~-~~~~~-- 222 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN-----------SEVVESVSAG-YRLYR-- 222 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH-----------HHHHHHHHcC-CcCCC--
Confidence 1 12223457999999998899999999999999999999 7888753221 1222222111 11110
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+.++.+++.+||+.+|++||++.++++.|.
T Consensus 223 --~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 223 --PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred --CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 1124556889999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=331.48 Aligned_cols=262 Identities=24% Similarity=0.408 Sum_probs=196.2
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----ceeE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RHSF 763 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 763 (964)
+|+..+.||+|+||.||+|..+ +++.||||++............+.+|+.++++++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4888999999999999999754 689999999875433334456788999999999999999999988543 3589
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+. ++|.+++.... .+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999995 69999986543 488999999999999999999999 99999999999999999999999999997543
Q ss_pred CCCC---Ccccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------CCCC------
Q 037111 844 PDSS---NWSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------SLPG------ 905 (964)
Q Consensus 844 ~~~~---~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------~~~~------ 905 (964)
.... ......|++.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..+.
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 2211 1234578999999999865 67899999999999999999999998543211000 0000
Q ss_pred ---CChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 906 ---ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 906 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........+ ....+.+. ..........+.+++.+||+.||++||+++|+++
T Consensus 235 i~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 235 VRNEKARRYLSSM-RKKQPVPF-SQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred hhhhhHHHHHHhh-cccCCCch-HHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000001111 11111110 0011122345778999999999999999999975
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=314.18 Aligned_cols=247 Identities=24% Similarity=0.414 Sum_probs=196.7
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGS 773 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 773 (964)
+.||+|+||.||+|+.+ +++.||+|.+... ........+.+|++++++++||||+++++++......++||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 35899999999999764 7889999987642 233445678999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc--cc
Q 037111 774 LARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW--SE 851 (964)
Q Consensus 774 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~--~~ 851 (964)
|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+|++|||.+.......... ..
T Consensus 80 L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 155 (252)
T cd05084 80 FLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155 (252)
T ss_pred HHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence 999996543 3488999999999999999999999 99999999999999999999999999987544321111 11
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE 930 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (964)
...+..|+|||.+.++.++.++||||||+++|||++ |..||..... ...... .....+.+. ..
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-----------~~~~~~-~~~~~~~~~----~~ 219 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-----------QQTREA-IEQGVRLPC----PE 219 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-----------HHHHHH-HHcCCCCCC----cc
Confidence 123457999999998889999999999999999998 8888753211 111111 111111111 12
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 931 DKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 931 ~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+..+.+++.+|+..+|++||++.+|.+.|+
T Consensus 220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 33456888999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=329.07 Aligned_cols=256 Identities=26% Similarity=0.413 Sum_probs=200.8
Q ss_pred hhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC-
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA- 759 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 759 (964)
.++|++.+.||+|+||.||+|... +++.||+|++.... .......+..|+.+++++ +||||++++++|...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 357999999999999999999532 35789999986432 233346678899999999 799999999988654
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC---------------------------------------------------------
Q 037111 760 RHSFLVYEYLERGSLARILSSET--------------------------------------------------------- 782 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~--------------------------------------------------------- 782 (964)
...++||||+++|+|.+++....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 57889999999999999986422
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC--cccccccccc
Q 037111 783 --ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGY 858 (964)
Q Consensus 783 --~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y 858 (964)
..++++..+.+++.||+.|++|||+. +|+||||||+||+++.++.++|+|||+++.+...... .....++..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 12578999999999999999999999 9999999999999999999999999999876433221 2233456789
Q ss_pred ccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHH
Q 037111 859 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSII 937 (964)
Q Consensus 859 ~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 937 (964)
+|||++.+..++.++|||||||++|||++ |..||..... .+............. .......++.
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~-----------~~~~~~~~~~~~~~~----~~~~~~~~~~ 306 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-----------DEEFCRRLKEGTRMR----APEYATPEIY 306 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc-----------cHHHHHHHhccCCCC----CCccCCHHHH
Confidence 99999999999999999999999999998 9999753211 111111111111111 0112345688
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 938 EVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 938 ~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+++.+||+.+|++||++.|+++.|+
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~ 331 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILG 331 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHH
Confidence 9999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=321.48 Aligned_cols=255 Identities=21% Similarity=0.350 Sum_probs=204.7
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+|+..+.||+|+||.||+|... ++..||+|++.... .......+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 45777889999999999999753 34689999987432 233346788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC
Q 037111 763 FLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE 828 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~ 828 (964)
++++||+++++|.+++.... ...+++..+.+++.|++.|++|+|++ +|+||||||+||+++++
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCC
Confidence 99999999999999985321 23478888999999999999999999 99999999999999999
Q ss_pred CceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCC
Q 037111 829 YEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPG 905 (964)
Q Consensus 829 ~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~ 905 (964)
+.+||+|||+++....... ......+++.|+|||.+.++.++.++||||||+++|||++ |..||..
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~----------- 229 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG----------- 229 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC-----------
Confidence 9999999999876543322 1223345778999999988889999999999999999998 7777642
Q ss_pred CChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+..+.+......+. ..+++..+.+++.+||+.+|++||++++|+..|+.
T Consensus 230 ~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 230 YSNQDVIEMIRNRQVLPC-----PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCHHHHHHHHHcCCcCCC-----CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 122334444433332211 12355668889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=327.34 Aligned_cols=243 Identities=25% Similarity=0.330 Sum_probs=196.6
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||+||+|+.+ +++.||||+++... ........+..|..+++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999765 57899999987532 1223345677888888877 699999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (318)
T cd05570 81 GDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST 155 (318)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccc
Confidence 99999986543 489999999999999999999999 9999999999999999999999999998754333333344
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+.......+ ..
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----------~~~~~~~i~~~~~~~~------~~ 218 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----------EDELFQSILEDEVRYP------RW 218 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----------HHHHHHHHHcCCCCCC------Cc
Confidence 568999999999999999999999999999999999999985322 2233333333222211 12
Q ss_pred HHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 037111 932 KLKSIIEVALSCVDANPERRPNM-----QIVCK 959 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~-----~evl~ 959 (964)
....+.+++.+||+.||++||++ .++++
T Consensus 219 ~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 219 LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 34567888999999999999999 77764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=327.93 Aligned_cols=246 Identities=24% Similarity=0.415 Sum_probs=205.1
Q ss_pred cccceeecCCceeEEEEEeC--CCC--eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 692 DESFCIGRGGYGSVYKAELP--SGD--TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
...+.||+|+||.|++|.|+ .|+ .||||.++...... ....|.+|+.+|.+++|||++++||+..+ ....||||
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 34567999999999999775 444 58999998644333 56899999999999999999999999987 77889999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
.++.|+|.+.+++.....+.......++.|||.|+.||.++ ++||||+.++|+++.....|||+|||+.+.+.....
T Consensus 191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 99999999999986667788899999999999999999999 999999999999999999999999999998876654
Q ss_pred Ccc---ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhh-ccCCCC
Q 037111 848 NWS---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMF-DARLPP 922 (964)
Q Consensus 848 ~~~---~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 922 (964)
.+. ...-...|+|||.+....|+.++|||+|||++|||+| |..||- +...-..++.+- .++++.
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~-----------G~~g~qIL~~iD~~erLpR 336 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWV-----------GCRGIQILKNIDAGERLPR 336 (1039)
T ss_pred ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCC-----------CCCHHHHHHhccccccCCC
Confidence 432 1123568999999999999999999999999999998 778864 222223333332 233433
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+.|++++++++..||..+|++|||+..+.+
T Consensus 337 ------Pk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 337 ------PKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred ------CCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 3578899999999999999999999999974
|
|
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=314.53 Aligned_cols=246 Identities=27% Similarity=0.403 Sum_probs=196.9
Q ss_pred eeecCCceeEEEEEe---CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 696 CIGRGGYGSVYKAEL---PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.||+|+||.||+|.+ +++..||+|+++.........+++..|+.+++.++||||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 589999999999964 357889999987544444556789999999999999999999999864 5678999999999
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc---
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW--- 849 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~--- 849 (964)
+|.+++.... .+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.++.........
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 81 PLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 9999996543 488999999999999999999999 99999999999999999999999999998765433211
Q ss_pred cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 850 SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 850 ~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
....+++.|+|||.+....++.++||||||+++|||++ |+.||.... ..+....+.....+ +.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----------~~~~~~~i~~~~~~-~~---- 219 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK-----------GNEVTQMIESGERM-EC---- 219 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHCCCCC-CC----
Confidence 12234578999999988889999999999999999998 999975321 12222222222111 11
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
...++.++.+++.+||+.||++||++++|++.|+.
T Consensus 220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 220 PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 11244567889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=313.58 Aligned_cols=252 Identities=24% Similarity=0.433 Sum_probs=203.7
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|++|.||+|..+.+..||+|.+.... .....+.+|+.++++++|||++++++++.. +..++||||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT---MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEF 81 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC---ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEc
Confidence 4688889999999999999988777789999875422 234568899999999999999999998854 568999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+.........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 9999999999765555688999999999999999999999 9999999999999999999999999999766433221
Q ss_pred -ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 849 -WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 849 -~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.....++..|+|||...+..++.++||||||+++|||++ |+.||.... ..+....+... ..++.
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----------~~~~~~~~~~~-~~~~~-- 224 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV-----------NREVLEQVERG-YRMPC-- 224 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHcC-CCCCC--
Confidence 123345678999999988889999999999999999999 888875221 12222322222 11111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+..+.+++.+||++||++||++++|+++|+.
T Consensus 225 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 --PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 12345668889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=320.59 Aligned_cols=247 Identities=22% Similarity=0.292 Sum_probs=196.6
Q ss_pred eecCCceeEEEEEeC-CCCeEEEEEeccccCc-hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCH
Q 037111 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE-TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL 774 (964)
Q Consensus 697 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 774 (964)
||+|+||.||+++.+ +|+.||+|++...... ......+..|++++++++||||+++++++.++...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999754 6899999998643221 12234556799999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccc
Q 037111 775 ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG 854 (964)
Q Consensus 775 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g 854 (964)
.+++.......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....... ......|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~ 156 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRAG 156 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccCC
Confidence 9998766666689999999999999999999999 99999999999999999999999999987664332 2234568
Q ss_pred ccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHH
Q 037111 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLK 934 (964)
Q Consensus 855 ~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (964)
++.|+|||++.+..++.++||||+||++|||++|+.||..... .....+..........+.. ......
T Consensus 157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~-----~~~~~~ 224 (277)
T cd05607 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE-------KVAKEELKRRTLEDEVKFE-----HQNFTE 224 (277)
T ss_pred CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcc-------hhhHHHHHHHhhccccccc-----cccCCH
Confidence 8999999999988899999999999999999999999853211 0111122222222222211 112345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 935 SIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 935 ~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
++.+++.+||+.||++||+++|+++
T Consensus 225 ~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 225 ESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred HHHHHHHHHhccCHhhCCCCccchh
Confidence 5788899999999999999977654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=293.58 Aligned_cols=255 Identities=22% Similarity=0.343 Sum_probs=205.9
Q ss_pred HHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCc------hhhHHHHHHHHHHHhCC-CCCceeeEEeeee
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGE------TTHQKEFLSEIKALTGV-RHRNIVKFYGFCS 757 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 757 (964)
.-.+.|+..+.+|.|..++|.++.+ ++|.++|+|++...... ..-.++-.+|+.+++++ .||+|+++.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 3456788899999999999999854 47889999998543211 11123455799999998 5999999999999
Q ss_pred cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccC
Q 037111 758 HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 758 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
.+..+++|+|.|+.|.|.||+.+. ..+++...++|+.|+.+|++|||.. .|||||+||+|||+|++.++||+|||
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccc
Confidence 999999999999999999999654 4488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCcccccccccccccccccc------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHH
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 911 (964)
+|+...++. .....+|||+|.|||.+.. .+|+..+|+||.||++|.++.|.+||.-..+ -..
T Consensus 169 Fa~~l~~Ge-kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ-----------mlM 236 (411)
T KOG0599|consen 169 FACQLEPGE-KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ-----------MLM 236 (411)
T ss_pred eeeccCCch-hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH-----------HHH
Confidence 999887654 4567899999999998863 3588899999999999999999999852111 122
Q ss_pred HHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+.-+..+++.-. ...+.+.....-+++.+|+..||.+|-|++|++.
T Consensus 237 LR~ImeGkyqF~--speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 237 LRMIMEGKYQFR--SPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHhcccccC--CcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 333444443311 1234455566778888999999999999999874
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=326.76 Aligned_cols=242 Identities=25% Similarity=0.334 Sum_probs=192.3
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhC-CCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTG-VRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|+.+ +|+.||+|.++.... .......+..|..++.. .+||+|+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999765 688999999875321 12233456677777765 4899999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++|+|||+++...........
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceec
Confidence 9999998654 3478899999999999999999999 9999999999999999999999999998754333333445
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..+.+.......+ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~-----------~~~~~~~~~~~~~~~~------~~ 218 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-----------EDELFESIRVDTPHYP------RW 218 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCC------CC
Confidence 678999999999999999999999999999999999999985321 2233333322221111 11
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 037111 932 KLKSIIEVALSCVDANPERRPNMQ-IVC 958 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~~-evl 958 (964)
...++.+++.+||+.||++||++. ++.
T Consensus 219 ~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 219 ITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 234577888899999999999984 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=350.27 Aligned_cols=257 Identities=24% Similarity=0.383 Sum_probs=200.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999764 689999999875322 2334567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhc---------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccC
Q 037111 767 EYLERGSLARILSSE---------TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 767 e~~~~gsL~~~l~~~---------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
||++||+|.+++... .....++..+.+++.||++||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998642 122356778889999999999999999 99999999999999999999999999
Q ss_pred cccccCCCC------------------CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 037111 838 TAKLLKPDS------------------SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899 (964)
Q Consensus 838 ~a~~~~~~~------------------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~ 899 (964)
+++...... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||.....
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-- 236 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-- 236 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch--
Confidence 997652111 001124689999999999999999999999999999999999999853211
Q ss_pred CCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHhc
Q 037111 900 DSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKLLS 962 (964)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-~~evl~~L~ 962 (964)
.+.... .....+.......+.+..+.+++.+|+++||++||+ ++++.+.|+
T Consensus 237 ---------~ki~~~---~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 237 ---------RKISYR---DVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred ---------hhhhhh---hhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 000000 000000000011234456788999999999999975 566666553
|
|
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=314.70 Aligned_cols=251 Identities=20% Similarity=0.357 Sum_probs=209.3
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|+||.||++.. .+|+.||+|++...........++.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 488899999999999999965 4688999999875433444556889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++++|.+++.......+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+.........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 157 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL 157 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence 9999999999766555688999999999999999999998 9999999999999999999999999999766544333
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....|++.|+|||+..+..++.++|||||||++|+|++|+.||... ...+....+.....++.
T Consensus 158 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~----- 221 (256)
T cd08218 158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----------NMKNLVLKIIRGSYPPV----- 221 (256)
T ss_pred hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-----------CHHHHHHHHhcCCCCCC-----
Confidence 33456888999999999888999999999999999999999997521 22333444443333321
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......++.+++.+||+.+|++||++++|++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 222 SSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred cccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1234456888999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=315.21 Aligned_cols=253 Identities=26% Similarity=0.500 Sum_probs=208.3
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|++.+.||+|+||.||+|..++++.||||.+.... ....++.+|+.++++++||||+++++++......++|||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT---MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc---cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 46799999999999999999988888899999986432 234678999999999999999999999999899999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+........
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 99999999999876656689999999999999999999999 999999999999999999999999999876653221
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC-CCCCc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR-LPPPW 924 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 924 (964)
......++..|+|||.+.+..++.++||||+|+++|||++ |+.||... ........+.... .+.+
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~-----------~~~~~~~~~~~~~~~~~~- 226 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM-----------TNREVLEQVERGYRMPRP- 226 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC-----------CHHHHHHHHHcCCCCCCC-
Confidence 1112234568999999998889999999999999999998 89887421 2223333332221 1111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
...+..+.+++.+|+..+|++||+++++.+.|+.
T Consensus 227 -----~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 -----PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -----CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1224568889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=329.56 Aligned_cols=252 Identities=21% Similarity=0.295 Sum_probs=197.8
Q ss_pred cccccceeecCCceeEEEEEe----CCCCeEEEEEecccc--CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCcee
Q 037111 690 NFDESFCIGRGGYGSVYKAEL----PSGDTVAVKKLHSFT--GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 762 (964)
+|++.+.||+|+||.||+++. .+++.||+|++.... ........+..|+.+++.+ +||+|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999865 367899999986432 1223345678899999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999999654 3488899999999999999999999 9999999999999999999999999999765
Q ss_pred CCCC-CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 843 KPDS-SNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 843 ~~~~-~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.... .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... .........+.....
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~~~~~~~~~~~ 228 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER-------NTQSEVSRRILKCDP 228 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC-------CCHHHHHHHHhcCCC
Confidence 4332 222345789999999998865 4788999999999999999999998632211 111122222222221
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
+.+ ......+.+++.+||+.||++|| +++++++
T Consensus 229 ~~~------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 229 PFP------SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCC------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 111 12334577888899999999999 6667654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=340.61 Aligned_cols=366 Identities=30% Similarity=0.464 Sum_probs=247.7
Q ss_pred CcCcceeEEeccCCcccc-CCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCE
Q 037111 81 SLFSHLSYLDLNENQLYG-NIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKN 159 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~ 159 (964)
+.++.++-.|+++|.|+| ..|..+..+++++.|-|...++. .+|++++.|.+|++|.+++|++.....+++.|+.|+.
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRLRS 82 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhhHH
Confidence 345678889999999995 79999999999999999999998 8999999999999999999999988888999999999
Q ss_pred EEcCCCCCCC-CCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 160 LALDGNHLDG-PIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 160 L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
+++..|++.. -||..+..|..|+.||||+|+++ ..|..+.+-+++-.|+|++|+|..++...|-++..|-.||||+|+
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch
Confidence 9999999953 47888888899999999999998 778888888888888888888886665667788888888888888
Q ss_pred cCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc-ccCCcccccCccccEEEeeCccCcccCCc
Q 037111 239 LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS-GHIPQEIGNFMNLNSLSVGGNQFTGFLPQ 317 (964)
Q Consensus 239 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 317 (964)
+. .+|+.+..+.+|++|.|++|.+...--..+..+++|++|.+++.+=+ ..+|..+..+.+|..+++|.|.+.
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp----- 235 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP----- 235 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-----
Confidence 87 66777788888888888888776433334445566666666654432 234444444444444444444443
Q ss_pred ccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCcc
Q 037111 318 NICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQL 397 (964)
Q Consensus 318 ~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L 397 (964)
.+|+.+-++.+|++|+|++|+|+..
T Consensus 236 --------------------~vPecly~l~~LrrLNLS~N~iteL----------------------------------- 260 (1255)
T KOG0444|consen 236 --------------------IVPECLYKLRNLRRLNLSGNKITEL----------------------------------- 260 (1255)
T ss_pred --------------------cchHHHhhhhhhheeccCcCceeee-----------------------------------
Confidence 2333333444444444444333321
Q ss_pred ceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeeccccccc-CCCchhhhccCCCCceeccc
Q 037111 398 GILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS-GGIPPELGLLTDLGYLDLSA 476 (964)
Q Consensus 398 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~ 476 (964)
.-..+...+|++|+||+|+++ ..|..++++++|+.|.+.+|+++ .-+|..++.
T Consensus 261 --------------~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGK----------- 314 (1255)
T KOG0444|consen 261 --------------NMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGK----------- 314 (1255)
T ss_pred --------------eccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhh-----------
Confidence 011122345666666666665 56666666666666666666665 224444444
Q ss_pred CccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCc
Q 037111 477 NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNN 550 (964)
Q Consensus 477 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 550 (964)
+.+|+.+..++|.+. ..|..++.+..|+.|.|++|++. .+|+.+.-|+.|+.|||..|+
T Consensus 315 -------------L~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 315 -------------LIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred -------------hhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 444444444444442 44555555555555555555554 455555555555555555553
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=328.71 Aligned_cols=239 Identities=25% Similarity=0.319 Sum_probs=192.0
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHH-HHhCCCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIK-ALTGVRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||+||+|+.+ +|+.||+|++..... .......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999764 789999999864321 1222344555554 46789999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++............
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST 155 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccc
Confidence 9999999654 3488899999999999999999999 9999999999999999999999999998764433333445
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||++.+..++.++|||||||++|||++|+.||... ...+....+.......+ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~-----------~~~~~~~~i~~~~~~~~------~~ 218 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----------DTAEMYDNILNKPLRLK------PN 218 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC-----------CHHHHHHHHHcCCCCCC------CC
Confidence 67899999999999999999999999999999999999997532 22333444443332211 12
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHH
Q 037111 932 KLKSIIEVALSCVDANPERRPNMQ 955 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~~ 955 (964)
....+.+++.+|++.||++||+++
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 219 ISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCHHHHHHHHHHhhcCHHhCCCCC
Confidence 245577888999999999999984
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=319.79 Aligned_cols=253 Identities=27% Similarity=0.468 Sum_probs=204.2
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+|...+.||+|+||.||+|... ++..|++|.+... .....+.+.+|+..+++++||||+++++++......
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 82 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc--cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence 46888899999999999999642 3456889987532 233346788999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC
Q 037111 763 FLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE 828 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~ 828 (964)
++||||+++++|.+++.... ...+++..++.++.||+.|++|||++ +++||||||+||+++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 99999999999999996532 23478999999999999999999999 99999999999999999
Q ss_pred CceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCC
Q 037111 829 YEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPG 905 (964)
Q Consensus 829 ~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~ 905 (964)
+.++|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--------- 230 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS--------- 230 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---------
Confidence 9999999999976544321 1223446788999999999899999999999999999999 999975322
Q ss_pred CChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+..+.+.....+.. ....+..+.+++.+||+.+|++||++++|+++|+
T Consensus 231 --~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 231 --NTEVIECITQGRVLER-----PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred --HHHHHHHHhCCCCCCC-----CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 1223333333322211 1224456889999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=324.99 Aligned_cols=242 Identities=25% Similarity=0.342 Sum_probs=191.9
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhC-CCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTG-VRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||+||+|+.. +++.||||+++.... .......+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999765 578999999875321 12233456667777765 5899999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++............
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT 155 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceee
Confidence 9999999653 3478899999999999999999999 9999999999999999999999999998754333333345
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||++.+..++.++||||+||++|||++|+.||.... ..+....+.......+ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----------~~~~~~~i~~~~~~~~------~~ 218 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-----------EEELFQSIRMDNPCYP------RW 218 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCC------cc
Confidence 678999999999999899999999999999999999999985321 2223333222211111 11
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 037111 932 KLKSIIEVALSCVDANPERRPNMQ-IVC 958 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~~-evl 958 (964)
...++.+++.+||+.||++||++. ++.
T Consensus 219 ~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 219 LTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 234577888899999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=312.51 Aligned_cols=251 Identities=25% Similarity=0.393 Sum_probs=206.6
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-CceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-ARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 767 (964)
+|+..+.||+|++|.||++..+ +++.||+|++..........+.+.+|+.++++++|||++++++.+.. +...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4888999999999999999654 57889999987544444455678899999999999999999998864 446899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++.......+++.++..++.+++.|++|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 99999999999875556689999999999999999999999 999999999999999999999999999987654433
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......+++.|+|||...+..++.++||||+|+++|+|++|+.||+.. ........+.....++.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~-----------~~~~~~~~~~~~~~~~~---- 222 (257)
T cd08223 158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK-----------DMNSLVYRIIEGKLPPM---- 222 (257)
T ss_pred ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-----------CHHHHHHHHHhcCCCCC----
Confidence 344556889999999999999999999999999999999999997521 12223333333333221
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||+++|++||++.++++
T Consensus 223 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 223 -PKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -ccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1234456889999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=316.78 Aligned_cols=254 Identities=25% Similarity=0.380 Sum_probs=201.6
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|++.+.||+|+||.||+|+. .+++.||+|++.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP--GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc--cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 4799999999999999999975 468899999986432 2234567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++... ..+++..+..++.|++.|++|||+. +|+|||++|+||+++.++.++|+|||++........
T Consensus 87 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 87 YCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 99999999998654 3478999999999999999999999 999999999999999999999999999986654433
Q ss_pred Cccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 NWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
......+++.|+|||.+. ...++.++|||||||++|||++|+.||....... ....+......++.
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~-----------~~~~~~~~~~~~~~ 230 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-----------ALFLMSKSNFQPPK 230 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh-----------hheeeecCCCCCCC
Confidence 334456888999999874 3457889999999999999999999975322111 01111111111111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
. .........+.+++.+||..+|++||+++++++.|
T Consensus 231 ~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 L-KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred C-ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0 01122345688899999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=330.04 Aligned_cols=200 Identities=26% Similarity=0.372 Sum_probs=173.5
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||+||+|+.. +++.||+|++..... .......+.+|+.++.+++||+|+++++++.+....|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36889999999999999999654 688999999864321 2233456888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999654 3488999999999999999999999 99999999999999999999999999987543211
Q ss_pred C-----------------------------------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 037111 847 S-----------------------------------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891 (964)
Q Consensus 847 ~-----------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p 891 (964)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0 01234689999999999999999999999999999999999999
Q ss_pred CC
Q 037111 892 KD 893 (964)
Q Consensus 892 ~~ 893 (964)
|.
T Consensus 236 f~ 237 (363)
T cd05628 236 FC 237 (363)
T ss_pred CC
Confidence 85
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=324.83 Aligned_cols=265 Identities=19% Similarity=0.295 Sum_probs=198.7
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||.||+|+.+ +++.||+|++..... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 57899999999999999999765 678899999864332 2223467789999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++ +|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 85 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 85 YLDK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 9975 8988886543 3478889999999999999999999 999999999999999999999999999976544433
Q ss_pred Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------------CCCCCCChhHHHH
Q 037111 848 NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------------SSLPGANMNEAID 913 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------------~~~~~~~~~~~~~ 913 (964)
......+++.|+|||.+.+ ..++.++||||+||++|||+||+.||........ ..++.........
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 3344567899999998865 4588999999999999999999999854322100 0000000000000
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+............++.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000000000011123456778999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=315.64 Aligned_cols=253 Identities=24% Similarity=0.370 Sum_probs=198.2
Q ss_pred cccceeecCCceeEEEEEeCCCC---eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------cee
Q 037111 692 DESFCIGRGGYGSVYKAELPSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------RHS 762 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 762 (964)
.+.+.||+|+||.||+|+..+.. .||+|.++...........+..|+.+++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 45678999999999999765432 589998875444455567889999999999999999999987432 256
Q ss_pred EEEEEeccCCCHHHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 763 FLVYEYLERGSLARILSSE----TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
++||||+++|+|.+++... ....+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999999988432 223478999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 839 AKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 839 a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
++........ .....+++.|+|||...+..++.++||||||+++|||++ |+.||... ...+..+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----------~~~~~~~~~ 227 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV-----------ENSEIYDYL 227 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC-----------CHHHHHHHH
Confidence 9876543221 122345678999999999999999999999999999999 78887421 112222322
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
......+. ....+..+.+++.+||++||++|||+.++++.|+.
T Consensus 228 ~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 228 RQGNRLKQ-----PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred HcCCCCCC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 22221111 11234557889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=334.50 Aligned_cols=252 Identities=23% Similarity=0.311 Sum_probs=198.5
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||+||+|+.. +++.||||++.... ........+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36889999999999999999764 68899999986432 12233456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 9999999999996543 488999999999999999999999 99999999999999999999999999987543211
Q ss_pred C--------------------------------------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhC
Q 037111 847 S--------------------------------------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG 888 (964)
Q Consensus 847 ~--------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg 888 (964)
. ......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 0 00123589999999999999999999999999999999999
Q ss_pred CCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCC---HHHHHH
Q 037111 889 QHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN---MQIVCK 959 (964)
Q Consensus 889 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs---~~evl~ 959 (964)
+.||.... ..+....+........... .......+.+++.+|+. +|.+|++ ++++++
T Consensus 236 ~~Pf~~~~-----------~~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 236 YPPFCSDN-----------PQETYRKIINWKETLQFPD--EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCC-----------HHHHHHHHHcCCCccCCCC--CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99985322 1222333322211100000 01123456677788886 9999998 877764
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=333.64 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=195.3
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.|+..+.||+|+||+||+|+. .+++.||+|++.... ........+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 588899999999999999965 468899999986532 223345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 999999999996543 478889999999999999999999 999999999999999999999999999754311000
Q ss_pred -----------------------------------------------CccccccccccccccccccCCCCcchhHHHHHH
Q 037111 848 -----------------------------------------------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGV 880 (964)
Q Consensus 848 -----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGv 880 (964)
......||+.|+|||.+.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 011346899999999999889999999999999
Q ss_pred HHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc--cCCCCCccccchHHHHHHHHHHHHH--ccCCCCCCCCCHHH
Q 037111 881 LALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--ARLPPPWLEVGVEDKLKSIIEVALS--CVDANPERRPNMQI 956 (964)
Q Consensus 881 ll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dp~~RPs~~e 956 (964)
++|||++|+.||.... ..+....+.. .....+.. .....++.+++.+ |+.++|..||++++
T Consensus 237 il~elltG~~Pf~~~~-----------~~~~~~~i~~~~~~~~~~~~----~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 237 ILFEMLVGQPPFLAPT-----------PTETQLKVINWENTLHIPPQ----VKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred HHHHHHhCCCCCcCCC-----------HHHHHHHHHccccccCCCCC----CCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 9999999999985322 1122222221 11111100 1122345566666 55667777999999
Q ss_pred HHH
Q 037111 957 VCK 959 (964)
Q Consensus 957 vl~ 959 (964)
+++
T Consensus 302 ~l~ 304 (381)
T cd05626 302 IKA 304 (381)
T ss_pred Hhc
Confidence 975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=320.46 Aligned_cols=258 Identities=24% Similarity=0.407 Sum_probs=205.3
Q ss_pred HhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (964)
..++|+..+.||+|+||.||+|... ++..||+|+++... .....+.+.+|+.+++++ +||||+++++++...
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 3467999999999999999999641 34579999886432 233456789999999999 799999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
+..++||||+++|+|.+++.......+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++++|||.+
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence 9999999999999999999765544589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 840 KLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 840 ~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
+........ .....+++.|+|||.+.+..++.++||||+||++|||++ |..||..... .+...+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~-----------~~~~~~~~ 257 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV-----------DSKFYKLI 257 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-----------hHHHHHHH
Confidence 765433211 112345678999999999899999999999999999998 9999753211 12222222
Q ss_pred ccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 917 DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+... ......++.+++.+|++++|++||++.++++.|+.
T Consensus 258 ~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 258 KEGYRMAQ----PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred HcCCcCCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 22211110 11223468889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=315.75 Aligned_cols=254 Identities=24% Similarity=0.392 Sum_probs=202.1
Q ss_pred ccccceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce-----
Q 037111 691 FDESFCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH----- 761 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 761 (964)
|++.+.||+|+||.||+|.... +..||+|+++...........+.+|+..++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999997642 3679999987544444445688999999999999999999998866544
Q ss_pred -eEEEEEeccCCCHHHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEecc
Q 037111 762 -SFLVYEYLERGSLARILSSE----TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDF 836 (964)
Q Consensus 762 -~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df 836 (964)
.++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 79999999999999998543 223588999999999999999999998 9999999999999999999999999
Q ss_pred CcccccCCCCCCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHH
Q 037111 837 GTAKLLKPDSSNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 837 g~a~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
|.++......... ....++..|+|||.+.+..++.++||||||+++|||++ |..||.... ..+..+
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~-----------~~~~~~ 226 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE-----------NHEIYD 226 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHH
Confidence 9998765443221 12234678999999988889999999999999999999 888874321 223333
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.+........ ...+...+.+++.+||+.||++||++.+|++.|+.
T Consensus 227 ~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 227 YLRHGNRLKQ-----PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HHHcCCCCCC-----CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 3333222211 12345568889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=357.52 Aligned_cols=485 Identities=29% Similarity=0.330 Sum_probs=402.1
Q ss_pred EeccCCccccCCCccccCCCCcCeeecccCCccCcCCc-ccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCC
Q 037111 89 LDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS-EIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHL 167 (964)
Q Consensus 89 L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l 167 (964)
+|++..+++ .||..+..-..+..|+++.|.+- ..|- .+..-..|+.|||++|++...+-.+..+.+|+.|+++.|.+
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccccCCchhhhHHHHhhcccchhhH
Confidence 566667776 68887777667999999999886 3333 33445559999999999998777899999999999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhh
Q 037111 168 DGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI 247 (964)
Q Consensus 168 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 247 (964)
. ..|.+.+++.+|++|.|.+|++. ..|.++..+.+|++|+++.|++. .+|..+..++.++.+..++|..... +
T Consensus 81 ~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----l 153 (1081)
T KOG0618|consen 81 R-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQR----L 153 (1081)
T ss_pred h-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhh----h
Confidence 8 67899999999999999999998 88999999999999999999998 6888999999999999999933312 3
Q ss_pred hcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceE
Q 037111 248 GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQY 327 (964)
Q Consensus 248 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~ 327 (964)
+... .+.+++..|.+.+.++..+..+.. .|+|++|.+. . ..+..+.+|+.|....|++.... ....+++.
T Consensus 154 g~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~ 223 (1081)
T KOG0618|consen 154 GQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSELE----ISGPSLTA 223 (1081)
T ss_pred cccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceEE----ecCcchhe
Confidence 3333 899999999999988888887776 7999999997 2 45778899999999999988542 23578999
Q ss_pred EEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeeccccc
Q 037111 328 FSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNI 407 (964)
Q Consensus 328 L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i 407 (964)
|+.++|.+....+... -.+|+++++++|++++.+ +....+.+|+.++..+|+++ ..+.......+|+.|....|.+
T Consensus 224 L~a~~n~l~~~~~~p~--p~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel 299 (1081)
T KOG0618|consen 224 LYADHNPLTTLDVHPV--PLNLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNEL 299 (1081)
T ss_pred eeeccCcceeeccccc--cccceeeecchhhhhcch-HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhh
Confidence 9999999885433222 257999999999999887 88899999999999999994 5666677788999999999999
Q ss_pred CCCCCCCCcccccCcEEeccCCcccccCCccccccC-CcceeecccccccCCCchhhhccCCCCceecccCccccccCCC
Q 037111 408 TGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLT-SLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGN 486 (964)
Q Consensus 408 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 486 (964)
. -+|+....++.|+.|||..|+|....+..|.-+. +|+.|+.+.|.+.....-.=...+.|+.|++.+|.+++..-..
T Consensus 300 ~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~ 378 (1081)
T KOG0618|consen 300 E-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPV 378 (1081)
T ss_pred h-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhh
Confidence 8 6677888899999999999999754444444443 4888888989887433222234678999999999999888778
Q ss_pred cccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccce
Q 037111 487 MGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLL 566 (964)
Q Consensus 487 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 566 (964)
+.++.+|+.|+|++|+|.......+.++..|++|+||+|+++ .+|..+.++..|++|...+|+|. ..| ++..++.|+
T Consensus 379 l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~ 455 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLK 455 (1081)
T ss_pred hccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcce
Confidence 999999999999999997656677899999999999999999 89999999999999999999998 566 899999999
Q ss_pred EEEecCCccccc-CCCCccCCCCCcccccCCCCcc
Q 037111 567 SIDISYNELDGP-IPSIEAFRHAPVEALQGNKGLC 600 (964)
Q Consensus 567 ~l~ls~N~l~~~-~~~~~~~~~~~~~~~~~n~~~c 600 (964)
.+|+|.|+|+-. +|.....+++...-+.||.+.-
T Consensus 456 ~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~ 490 (1081)
T KOG0618|consen 456 VLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLV 490 (1081)
T ss_pred EEecccchhhhhhhhhhCCCcccceeeccCCcccc
Confidence 999999999863 4443333566667789999743
|
|
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=318.21 Aligned_cols=257 Identities=21% Similarity=0.382 Sum_probs=203.4
Q ss_pred HhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
..++|++.+.||+|+||.||+|..+ .+..||+|.+.... .......+.+|+..++.++||||+++++++.+..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4568999999999999999999643 24579999876432 2233456888999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceE
Q 037111 761 HSFLVYEYLERGSLARILSSET--------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH 832 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~k 832 (964)
..++||||+++|+|.+++.... ....++..+..++.|++.|++|||++ +|+||||||+||+++.++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEE
Confidence 9999999999999999997532 23356778889999999999999999 999999999999999999999
Q ss_pred EeccCcccccCCCCCCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChh
Q 037111 833 VSDFGTAKLLKPDSSNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMN 909 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~ 909 (964)
++|||+++......... ....++..|+|||.+.++.++.++|||||||++|||++ |+.||.. ....
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~-----------~~~~ 228 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG-----------LSNE 228 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCC-----------CCHH
Confidence 99999997654332211 12245678999999998889999999999999999998 7778642 1222
Q ss_pred HHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 910 EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
+....+........ ....+..+.+++.+|++.||++||++.++++.|+.
T Consensus 229 ~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 229 QVLKFVMDGGYLDQ-----PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred HHHHHHHcCCCCCC-----CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 33333333222211 11234568899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=331.74 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=201.9
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
..++|+..+.||+|+||.||+|+.+ +++.||+|++.... ........+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4568999999999999999999764 68899999986432 222334557789999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999998643 377888899999999999999999 999999999999999999999999999976643
Q ss_pred CCC-CccccccccccccccccccC----CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 845 DSS-NWSELAGTYGYVAPELAYTM----KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 845 ~~~-~~~~~~g~~~y~aPE~~~~~----~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
... ......|++.|+|||.+.+. .++.++|||||||++|||++|+.||.... .......+....
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----------~~~~~~~i~~~~ 263 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----------LVGTYSKIMDHK 263 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC-----------HHHHHHHHHcCC
Confidence 322 22345799999999998653 37889999999999999999999985322 123333333322
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPER--RPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPs~~evl~ 959 (964)
....... .......+.+++.+|+..+|++ ||+++++++
T Consensus 264 ~~~~~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 264 NSLTFPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CcCCCCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 1111000 1123456778888999999988 999999865
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=311.11 Aligned_cols=250 Identities=27% Similarity=0.450 Sum_probs=206.2
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|... |+.||+|.+..... ..+.+.+|+.++++++|+||+++++++.+....++|||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 357888999999999999999875 88999999865322 45778999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++.......+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~ 157 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD 157 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence 99999999999876655689999999999999999999999 999999999999999999999999999986632221
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
....+..|+|||.+.++.++.++||||||+++|||++ |+.||.... ..+....... ..+..
T Consensus 158 ---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----------~~~~~~~~~~-~~~~~--- 219 (256)
T cd05039 158 ---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----------LKDVVPHVEK-GYRME--- 219 (256)
T ss_pred ---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-----------HHHHHHHHhc-CCCCC---
Confidence 2334567999999988889999999999999999997 999875221 1222222211 11111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.....+..+.+++.+||..+|++||++.++++.|+.
T Consensus 220 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 220 -APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred -CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 112234668889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=320.92 Aligned_cols=252 Identities=23% Similarity=0.341 Sum_probs=212.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 764 (964)
...|+..+.||+|.||.||+++.+ +|+.||+|.+.+... .......+.+|+.+|+++. |||||.++++|++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 346888899999999999999776 499999999976533 2234578899999999998 9999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC----CceEEeccCccc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE----YEAHVSDFGTAK 840 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~ 840 (964)
|||++.||.|.+.+... .+++..+..++.|++.|+.|||+. +|+|||+||+|+|+... +.+|++|||+|.
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 99999999999999766 289999999999999999999998 99999999999999654 479999999999
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
...+ .......+||+.|+|||++...+|+..+||||+||++|.|++|..||..... .+....+....+
T Consensus 188 ~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~-----------~~~~~~i~~~~~ 255 (382)
T KOG0032|consen 188 FIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETE-----------FEIFLAILRGDF 255 (382)
T ss_pred EccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCCh-----------hHHHHHHHcCCC
Confidence 8887 5667788999999999999999999999999999999999999999864332 233334444433
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.- ....+.......-+++..|+..||.+|+|+.++++
T Consensus 256 ~f--~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 256 DF--TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CC--CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 21 11223444556677888999999999999999986
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=315.32 Aligned_cols=256 Identities=21% Similarity=0.355 Sum_probs=205.1
Q ss_pred hhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|++.+.||+|+||.||+|..+ ++..||+|.+.... .......+.+|+.+++.++||||+++++++.....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 357889999999999999999654 24689999986432 33345678899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 762 SFLVYEYLERGSLARILSSET--------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
.++||||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEE
Confidence 999999999999999996532 22367889999999999999999998 9999999999999999999999
Q ss_pred eccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhH
Q 037111 834 SDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+|||.++....... ......++..|+|||.+.++.++.++|||||||++||+++ |..||.. ....+
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~-----------~~~~~ 229 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQG-----------LSNEE 229 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCcc-----------CCHHH
Confidence 99999976544322 1223446788999999988889999999999999999998 8888742 12223
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+.....+.. ....+.++.+++.+||+.+|++|||+.++++.|+.
T Consensus 230 ~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 230 VLKFVIDGGHLDL-----PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHHHhcCCCCCC-----CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 3333332222111 11235668899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=315.04 Aligned_cols=252 Identities=23% Similarity=0.360 Sum_probs=197.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCC----eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|++.+.||+|+||+||+|.+. +++ +|++|.+... .......++..|+..+++++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccE
Confidence 46888899999999999999764 444 4777776532 222334678888889999999999999999864 5578
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+++||+++|+|.+++.... ..+++..+..++.||+.|++|||+. +++||||||+||+++.++.+|++|||.++...
T Consensus 85 ~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 9999999999999997543 3488999999999999999999998 99999999999999999999999999998664
Q ss_pred CCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.... ......++..|+|||.+.++.++.++||||||+++|||++ |+.||.... ..+..+.+.....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-----------~~~~~~~~~~~~~ 229 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR-----------PHEVPDLLEKGER 229 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC-----------HHHHHHHHHCCCc
Confidence 4322 1233456778999999998899999999999999999998 998975321 1111111211121
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
++. ...+..++.+++.+||..+|++||++.|+++.|.
T Consensus 230 ~~~-----~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~ 266 (279)
T cd05111 230 LAQ-----PQICTIDVYMVMVKCWMIDENVRPTFKELANEFT 266 (279)
T ss_pred CCC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111 0123345778899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=319.18 Aligned_cols=265 Identities=26% Similarity=0.399 Sum_probs=200.3
Q ss_pred hcccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--Cce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH--ARH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 761 (964)
..|++.+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 3688889999999999999964 35789999998643 33445678999999999999999999998754 346
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccc
Confidence 899999999999999996543 3488999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC----CCCCCChhHHHHh
Q 037111 842 LKPDSSNW---SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS----SLPGANMNEAIDH 914 (964)
Q Consensus 842 ~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~ 914 (964)
........ ....++..|+|||...+..++.++|||||||++|||++|..|+......... ..........+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 65432211 1122345699999999888999999999999999999987765322211000 0000001111111
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
........+ .....+..+.+++.+||..+|++|||+++|++.|+.
T Consensus 238 ~~~~~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 238 LLKNNGRLP----APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred HHhcCCcCC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 121111111 112344568899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=309.13 Aligned_cols=247 Identities=24% Similarity=0.390 Sum_probs=198.7
Q ss_pred eeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCHH
Q 037111 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLA 775 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 775 (964)
.||+|+||.||+|..++++.||+|.+.... .......+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 689999999999988888999999986432 2333457889999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc-ccccc
Q 037111 776 RILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW-SELAG 854 (964)
Q Consensus 776 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~g 854 (964)
+++.... ..+++..+..++.|++.|+.|+|++ +++||||+|+||+++.++.+|++|||++.......... ....+
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 9986543 3478999999999999999999999 99999999999999999999999999997544332211 12234
Q ss_pred ccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHH
Q 037111 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKL 933 (964)
Q Consensus 855 ~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (964)
++.|+|||++.+..++.++||||||+++|++++ |..||.... .......+... .... .....+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~-----------~~~~~~~~~~~-~~~~----~~~~~~ 220 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMT-----------NQQAREQVEKG-YRMS----CPQKCP 220 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC-----------HHHHHHHHHcC-CCCC----CCCCCC
Confidence 567999999998889999999999999999998 888975221 11222222111 1111 011234
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 934 KSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 934 ~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..+.+++.+|++.+|++||++.++++.|.+
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 250 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELAA 250 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhcC
Confidence 568889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=327.85 Aligned_cols=241 Identities=24% Similarity=0.295 Sum_probs=191.0
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHH-HHhCCCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIK-ALTGVRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||+||+|+.+ +++.||+|++..... .......+..|.. +++.++||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999765 577899999864321 1122234444444 56788999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++.... .+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~ 155 (325)
T cd05602 81 GELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTST 155 (325)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccc
Confidence 99999996543 477888889999999999999999 9999999999999999999999999999765433333445
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||++.+..++.++||||+||++|||++|+.||... ...+....+.......+ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----------~~~~~~~~i~~~~~~~~------~~ 218 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----------NTAEMYDNILNKPLQLK------PN 218 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCC-----------CHHHHHHHHHhCCcCCC------CC
Confidence 67999999999999999999999999999999999999998522 12233334333322211 12
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHH
Q 037111 932 KLKSIIEVALSCVDANPERRPNMQIV 957 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~~ev 957 (964)
....+.+++.+|++.||.+||++.+.
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 219 ITNSARHLLEGLLQKDRTKRLGAKDD 244 (325)
T ss_pred CCHHHHHHHHHHcccCHHHCCCCCCC
Confidence 33457788889999999999998643
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=325.43 Aligned_cols=245 Identities=21% Similarity=0.300 Sum_probs=193.8
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|+.+ +++.||+|+++.... .......+..|+.++.++ +||+|+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999764 678899999875322 233445688899998888 699999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++............
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST 155 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceec
Confidence 9999988654 3489999999999999999999999 9999999999999999999999999999754333333445
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||++.+..++.++|||||||++|||++|+.||+........ .........+.......+ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~p------~~ 225 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM----NTEDYLFQVILEKPIRIP------RF 225 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc----ccHHHHHHHHHhCCCCCC------CC
Confidence 67999999999999999999999999999999999999999643221110 111122222222222211 11
Q ss_pred HHHHHHHHHHHccCCCCCCCCCH
Q 037111 932 KLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
....+.+++.+|++.||++|+++
T Consensus 226 ~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 226 LSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCHHHHHHHHHHhccCHHHcCCC
Confidence 23456788889999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=338.07 Aligned_cols=371 Identities=27% Similarity=0.401 Sum_probs=279.1
Q ss_pred CCCCCEEEcCCCCCC-CCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCcccccee
Q 037111 154 LSSLKNLALDGNHLD-GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232 (964)
Q Consensus 154 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 232 (964)
|+-.+-.|+++|.|+ +..|.....|+++++|.|...++. .+|+.++.|.+|++|.+++|++. .+...++.++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 344455677777777 456777777777777777777776 66777777777777777777776 345566677777777
Q ss_pred eccccccC-CCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccC
Q 037111 233 ELSNNQLS-GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQF 311 (964)
Q Consensus 233 ~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 311 (964)
++..|++. .-+|..+..+..|+.||||+|+++ .+|..+...+++-.|+||+|+|..+....|.++..|-.|+||+|++
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh
Confidence 77777764 235566667777777777777777 6677777777777777777777633334455666666666666666
Q ss_pred cccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccc
Q 037111 312 TGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNW 391 (964)
Q Consensus 312 ~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~ 391 (964)
.. +|+.++.+..|++|.|++|.+.......+..+++|++|.+++.+=+
T Consensus 163 e~-------------------------LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT------- 210 (1255)
T KOG0444|consen 163 EM-------------------------LPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT------- 210 (1255)
T ss_pred hh-------------------------cCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch-------
Confidence 53 2333444555555555555554333333333344444444443211
Q ss_pred cCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCc
Q 037111 392 WNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGY 471 (964)
Q Consensus 392 ~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 471 (964)
...+|..+..+.+|..+|||.|.+. .+|..+.++++|+.|+|++|+|+ .+....+...+|+.
T Consensus 211 ----------------l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEt 272 (1255)
T KOG0444|consen 211 ----------------LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLET 272 (1255)
T ss_pred ----------------hhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhh
Confidence 1257888999999999999999997 89999999999999999999998 55667778889999
Q ss_pred eecccCccccccCCCcccccccceecCCccccCc-cchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCc
Q 037111 472 LDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ-EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNN 550 (964)
Q Consensus 472 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 550 (964)
|+||.|+++ ..|.++..+++|+.|.+.+|+++- -+|..+++|.+|+.+..++|.+. ..|+.++.+.+|+.|.|++|+
T Consensus 273 LNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~Nr 350 (1255)
T KOG0444|consen 273 LNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNR 350 (1255)
T ss_pred hccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccc
Confidence 999999997 799999999999999999999974 37999999999999999999998 899999999999999999999
Q ss_pred CCCcccccccccccceEEEecCCcccccCC
Q 037111 551 LSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 551 l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
|- .+|+++.-++.|..||+..|+=---+|
T Consensus 351 Li-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 351 LI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred ee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 97 689999999999999999997544333
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=324.37 Aligned_cols=243 Identities=22% Similarity=0.341 Sum_probs=196.4
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 766 (964)
+|+..+.||+|+||+||+|..+ +|+.||+|++..... .......+..|..+++.+. |++|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999754 688999999874321 2233456778888888775 678889999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 9999999999986543 488999999999999999999999 99999999999999999999999999987654333
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||... ........+.......+
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~-----------~~~~~~~~i~~~~~~~p--- 221 (323)
T cd05615 156 VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE-----------DEDELFQSIMEHNVSYP--- 221 (323)
T ss_pred ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC-----------CHHHHHHHHHhCCCCCC---
Confidence 3334556899999999999989999999999999999999999998532 12233344433332211
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
.....++.+++.+|++.+|++|++.
T Consensus 222 ---~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 222 ---KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1233457788899999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=316.00 Aligned_cols=254 Identities=25% Similarity=0.447 Sum_probs=202.6
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+|...+.||+|+||.||++..+ ++..||+|.+... .......+.+|++.++.++||||+++++++......
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL 82 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence 46788899999999999999532 3567899987642 334456899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCC-------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 763 FLVYEYLERGSLARILSSETA-------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCC
Confidence 999999999999999975432 3478899999999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCC
Q 037111 830 EAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGA 906 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~ 906 (964)
.+||+|||++......... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------- 230 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--------- 230 (280)
T ss_pred CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH---------
Confidence 9999999999755432211 122335678999999998899999999999999999998 8888743211
Q ss_pred ChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 907 NMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.+............ ....++..+.+++.+||+.||++||++++|++.|++
T Consensus 231 --~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 231 --TEAIECITQGRELE-----RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred --HHHHHHHHcCccCC-----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 12222222221111 011334567889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=326.02 Aligned_cols=239 Identities=24% Similarity=0.332 Sum_probs=191.0
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHH-HHhCCCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIK-ALTGVRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|+.. +++.||+|++..... .......+.+|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999764 688999999864321 2222344555554 57889999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST 155 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccc
Confidence 9999988653 3478888999999999999999999 9999999999999999999999999998764333333345
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||.+.+..++.++|||||||++|||++|+.||... ......+.+.......+ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----------~~~~~~~~i~~~~~~~~------~~ 218 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----------DVSQMYDNILHKPLQLP------GG 218 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC-----------CHHHHHHHHhcCCCCCC------CC
Confidence 57899999999999989999999999999999999999998532 22333444444333221 12
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHH
Q 037111 932 KLKSIIEVALSCVDANPERRPNMQ 955 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~~ 955 (964)
....+.+++.+|++.||++||++.
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 219 KTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCHHHHHHHHHHccCCHhhcCCCC
Confidence 234577888999999999999763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-35 Score=310.68 Aligned_cols=249 Identities=25% Similarity=0.406 Sum_probs=201.8
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee-cCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS-HARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~ 766 (964)
..+|+..+.||+|+||.||+|..+ |..||+|.++.. ...+.+.+|+.++++++|+|++++++++. .+...++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 357889999999999999999775 788999987532 22457889999999999999999999764 456789999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.......+++..+..++.|++.|++|||++ +++||||||+||+++.++.+|++|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156 (256)
T ss_pred ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence 999999999999876655688999999999999999999999 99999999999999999999999999987544322
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
....++..|+|||++.+..++.++||||||+++|||++ |+.||... ...+....+.. ..++.
T Consensus 157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----------~~~~~~~~~~~-~~~~~-- 219 (256)
T cd05082 157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----------PLKDVVPRVEK-GYKMD-- 219 (256)
T ss_pred ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----------CHHHHHHHHhc-CCCCC--
Confidence 22344568999999998889999999999999999998 88887421 12222222211 11111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....++..+.+++.+||+.+|++|||+.++++.|+.
T Consensus 220 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 220 --APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred --CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 112345668889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=317.58 Aligned_cols=253 Identities=26% Similarity=0.426 Sum_probs=200.3
Q ss_pred cccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
+|+..+.||+|+||.||+|... ....||+|.+.... .......+.+|+.+++.++||||+++++++..++..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 4778899999999999999653 23468888876432 2334567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhc----------------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCC
Q 037111 764 LVYEYLERGSLARILSSE----------------------TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSK 821 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~----------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~ 821 (964)
+||||+.+|+|.+++... ....+++..+..++.|++.|++|||+. +++||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhh
Confidence 999999999999998642 123478899999999999999999999 9999999999
Q ss_pred CeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccc
Q 037111 822 NVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSL 898 (964)
Q Consensus 822 Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~ 898 (964)
||++++++.+||+|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--- 233 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--- 233 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC---
Confidence 999999999999999999765433221 122345678999999988889999999999999999998 99887421
Q ss_pred cCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 899 SDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+... ........+ .......++.+++.+||+++|++||+++++++.|+
T Consensus 234 --------~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~ 284 (290)
T cd05045 234 --------APERLFN-LLKTGYRME----RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELE 284 (290)
T ss_pred --------CHHHHHH-HHhCCCCCC----CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 1122222 222211111 11234456889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=320.50 Aligned_cols=257 Identities=23% Similarity=0.384 Sum_probs=204.5
Q ss_pred HhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (964)
..++|+..+.||+|+||.||+|... ....||+|.+.... .......+.+|+.+++++ +||||+++++++..+
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 4457889999999999999999754 23578999887532 233446788999999999 799999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhc--------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE
Q 037111 760 RHSFLVYEYLERGSLARILSSE--------------TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL 825 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill 825 (964)
+..++||||+++|+|.+++... ....+++..+.+++.|++.|++|||+. +|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEE
Confidence 9999999999999999999642 234688999999999999999999998 99999999999999
Q ss_pred CCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCC
Q 037111 826 DFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSS 902 (964)
Q Consensus 826 ~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~ 902 (964)
+.++.+|++|||.++........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~-------- 237 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG-------- 237 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCC--------
Confidence 99999999999999876543221 122234678999999988889999999999999999997 8888642
Q ss_pred CCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 903 LPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+....+....... ........+.+++.+||+.+|++|||+.++++.|+.
T Consensus 238 ---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 238 ---IPVEELFKLLKEGYRME-----KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred ---CCHHHHHHHHHcCCcCC-----CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 11222222222221111 112334568889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=317.09 Aligned_cols=256 Identities=24% Similarity=0.418 Sum_probs=205.3
Q ss_pred hhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|+..+.||+|+||.||+|..+ ++..||+|++... .......++.+|+.++++++||||+++++++.++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC-cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 467899999999999999999753 4678999998643 233445678899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcC--------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCC
Q 037111 762 SFLVYEYLERGSLARILSSET--------------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSK 821 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~ 821 (964)
.++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHh
Confidence 999999999999999996422 12467888999999999999999999 9999999999
Q ss_pred CeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccc
Q 037111 822 NVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSL 898 (964)
Q Consensus 822 Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~ 898 (964)
||+++.++.++++|||.+......... ......++.|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~--- 236 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM--- 236 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---
Confidence 999999999999999998765433211 122234667999999998899999999999999999997 77786421
Q ss_pred cCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 899 SDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
...+....+......+. ....+.++.+++.+||+.||++||++.|+++.|+.
T Consensus 237 --------~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 237 --------AHEEVIYYVRDGNVLSC-----PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --------CHHHHHHHHhcCCCCCC-----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 22233333333333211 11234568889999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=330.23 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=199.3
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
...++|+..+.||+|+||.||+|+.+ +++.||+|.+.... ........+.+|+.+++.++||||+++++++.++...|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999765 57889999986422 22233456788999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|....
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 999999999999999643 378889999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CccccccccccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 844 PDSS-NWSELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 844 ~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
.... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||.... ..+....+...
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~-----------~~~~~~~i~~~ 262 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-----------LVGTYSKIMDH 262 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhC
Confidence 3322 223567999999999987543 7889999999999999999999985321 22333333332
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPER--RPNMQIVCK 959 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPs~~evl~ 959 (964)
........ .......+.+++..|+..++.+ ||++.|+++
T Consensus 263 ~~~~~~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 263 KNSLNFPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred CcccCCCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 21111100 1123345667777888755544 889999875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=324.49 Aligned_cols=245 Identities=28% Similarity=0.397 Sum_probs=200.7
Q ss_pred eeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCH
Q 037111 696 CIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL 774 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 774 (964)
+||+|.||+||-|+.. +..++|||.+.... ....+.+.+||..-++++|.|||+++|.+.+++..-+.||-++||+|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 7999999999999765 45678999987533 33346788999999999999999999999999999999999999999
Q ss_pred HHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceEEeccCcccccCCCCCCcccc
Q 037111 775 ARILSS-ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAHVSDFGTAKLLKPDSSNWSEL 852 (964)
Q Consensus 775 ~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~ 852 (964)
.+.++. .+...-.+.++-.+.+||++||.|||+. .|||||||-+||+++. .|.+||+|||.++....-.....++
T Consensus 660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF 736 (1226)
T KOG4279|consen 660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF 736 (1226)
T ss_pred HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence 999975 3333347788889999999999999999 9999999999999964 6899999999998877666666788
Q ss_pred ccccccccccccccC--CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchH
Q 037111 853 AGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE 930 (964)
Q Consensus 853 ~g~~~y~aPE~~~~~--~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (964)
.||..|||||++..+ +|..++|||||||++.||.||++||........ .+-++=-.+..|+ .++
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA----------AMFkVGmyKvHP~----iPe 802 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA----------AMFKVGMYKVHPP----IPE 802 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH----------hhhhhcceecCCC----CcH
Confidence 999999999999754 488999999999999999999999865443221 1111100111121 235
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 931 DKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 931 ~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+...+...++.+|+.+||..||+++++++
T Consensus 803 elsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 66677888999999999999999999875
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=318.52 Aligned_cols=254 Identities=30% Similarity=0.496 Sum_probs=202.9
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|+.++.||+|+||+||+++.+ +++.||+|.+...............|+..+++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 678899999999999999766 4568999999865544444445566999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 849 (964)
++++|.+++.. ...+++..+..++.|+++||++||+. +++||||||+||+++.++.++|+|||.+..........
T Consensus 81 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~ 155 (260)
T PF00069_consen 81 PGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENF 155 (260)
T ss_dssp TTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEB
T ss_pred ccccccccccc--cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 99999999973 33478999999999999999999999 99999999999999999999999999997653333444
Q ss_pred cccccccccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 850 SELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 850 ~~~~g~~~y~aPE~~~-~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
....+++.|+|||.+. +..++.++||||+|+++|+|++|..||..... ........+......+... ..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~--~~ 225 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--------DDQLEIIEKILKRPLPSSS--QQ 225 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--------HHHHHHHHHHHHTHHHHHT--TS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc--------hhhhhhhhhcccccccccc--cc
Confidence 5667899999999998 78899999999999999999999999864310 1111222222211111000 00
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||+.||++||++.++++
T Consensus 226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 226 SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0111267889999999999999999999975
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-35 Score=317.96 Aligned_cols=253 Identities=23% Similarity=0.378 Sum_probs=198.5
Q ss_pred hcccccceeecCCceeEEEEEeCC-CC--eEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS-GD--TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (964)
++|++.+.||+|+||.||+|..++ +. .+++|.++... .....+.+.+|+.+++++ +||||+++++++......++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 578999999999999999997653 33 47888876422 233356788999999999 79999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc
Q 037111 765 VYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE 830 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~ 830 (964)
||||+++|+|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCe
Confidence 999999999999996532 12478899999999999999999998 9999999999999999999
Q ss_pred eEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChh
Q 037111 831 AHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMN 909 (964)
Q Consensus 831 ~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~ 909 (964)
+||+|||++........ ......+..|+|||.+.+..++.++|||||||++|||++ |+.||.... ..
T Consensus 158 ~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~-----------~~ 225 (297)
T cd05089 158 SKIADFGLSRGEEVYVK-KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT-----------CA 225 (297)
T ss_pred EEECCcCCCccccceec-cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----------HH
Confidence 99999999864321111 111223457999999998889999999999999999997 999975321 22
Q ss_pred HHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 910 EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+......... .++. .......+.+++.+||..+|.+||+++++++.|+
T Consensus 226 ~~~~~~~~~~-~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 226 ELYEKLPQGY-RMEK----PRNCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHHHhcCC-CCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2233322211 1110 1123456788999999999999999999988874
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=327.36 Aligned_cols=240 Identities=24% Similarity=0.321 Sum_probs=191.8
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHH-HHhCCCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIK-ALTGVRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|+.+ +|+.||+|++..... .......+..|.. +++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999654 689999999864321 2223345555655 46789999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT 155 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccc
Confidence 9999988643 3588999999999999999999999 9999999999999999999999999998754433333345
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..|++.|+|||.+.+..++.++|||||||++|||++|+.||... ...+....+.......+ ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~-----------~~~~~~~~~~~~~~~~~------~~ 218 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR-----------DVAEMYDNILHKPLVLR------PG 218 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC-----------CHHHHHHHHHcCCccCC------CC
Confidence 67999999999999999999999999999999999999998532 12233344433332211 11
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHH
Q 037111 932 KLKSIIEVALSCVDANPERRPNMQI 956 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~~e 956 (964)
....+.+++.+|+..+|++||++++
T Consensus 219 ~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 219 ASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred CCHHHHHHHHHHhccCHHhcCCCCC
Confidence 3345778888999999999998853
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=312.14 Aligned_cols=254 Identities=26% Similarity=0.441 Sum_probs=203.4
Q ss_pred hcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
.+|++.+.||+|+||.||+|... ++..||+|.++... .....+.+..|+.++++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46888999999999999999753 23379999886432 23345688999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+.....
T Consensus 83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 83 VTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999997643 3478999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 DSSNW---SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
..... ....++..|+|||.+.+..++.++||||||+++||+++ |+.||..... .+....+.+...
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~-----------~~~~~~~~~~~~ 227 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN-----------QDVIKAIEEGYR 227 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH-----------HHHHHHHhCCCc
Confidence 32211 11223568999999998889999999999999999886 9999753221 122222222211
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.+. ....+..+.+++.+|++.+|++||++.++++.|..
T Consensus 228 ~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 228 LPA-----PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred CCC-----CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 111 12334567889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=328.35 Aligned_cols=257 Identities=26% Similarity=0.403 Sum_probs=201.8
Q ss_pred HhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 759 (964)
..++|.+.+.||+|+||.||+|++. .++.||+|+++... .....+.+.+|+.++.++. ||||+++++++...
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 3456888899999999999999753 34679999997532 2233457889999999997 99999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCC--------------------------------------------------------
Q 037111 760 RHSFLVYEYLERGSLARILSSETA-------------------------------------------------------- 783 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 783 (964)
+..++||||+++|+|.++++....
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 999999999999999999965321
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCe
Q 037111 784 ----------------------------------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNV 823 (964)
Q Consensus 784 ----------------------------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Ni 823 (964)
..+++..+..++.|++.|++|||+. +++||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceE
Confidence 2356778889999999999999998 999999999999
Q ss_pred EECCCCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccC
Q 037111 824 LLDFEYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSD 900 (964)
Q Consensus 824 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~ 900 (964)
++++++.+|++|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~---- 346 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP---- 346 (401)
T ss_pred EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC----
Confidence 999999999999999976532221 1123356788999999998889999999999999999998 888875321
Q ss_pred CCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 901 SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+...........++. ......++.+++.+||+.+|++||++++|++.|+
T Consensus 347 -------~~~~~~~~~~~~~~~~~----p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~ 397 (401)
T cd05107 347 -------MNEQFYNAIKRGYRMAK----PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVG 397 (401)
T ss_pred -------chHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11212222221111110 1123456888999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=313.96 Aligned_cols=256 Identities=23% Similarity=0.354 Sum_probs=201.7
Q ss_pred HhhcccccceeecCCceeEEEEEeCC------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELPS------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
..++|++.+.||+|+||.||+|.... +..||+|.+... ........+..|+.++++++|+||+++++++.+..
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 34679999999999999999997653 567889987542 23334467899999999999999999999999988
Q ss_pred eeEEEEEeccCCCHHHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceE
Q 037111 761 HSFLVYEYLERGSLARILSSETA-----TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAH 832 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~k 832 (964)
..++||||+++|+|.+++..... ..+++..+.+++.||+.|++|||+. +++||||||+||+++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceE
Confidence 99999999999999999976432 2588999999999999999999999 999999999999998754 599
Q ss_pred EeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChh
Q 037111 833 VSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMN 909 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~ 909 (964)
++|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||.... ..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~-----------~~ 228 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT-----------NQ 228 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-----------HH
Confidence 9999999866332211 112233568999999998899999999999999999997 988975321 12
Q ss_pred HHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 910 EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+....+... .+... ....+..+.+++.+|++.+|++||++.+|++.|+
T Consensus 229 ~~~~~~~~~-~~~~~----~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 229 EVMEFVTGG-GRLDP----PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHHcC-CcCCC----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 222222111 11111 1223456888999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=316.50 Aligned_cols=249 Identities=25% Similarity=0.418 Sum_probs=202.2
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.+++.++||||+++++++..+...++|||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence 4788999999999999999975 4688999998864322 234678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++... .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+........
T Consensus 98 ~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 98 YLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred ccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 99999999998543 378889999999999999999999 999999999999999999999999999886654433
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......+++.|+|||.+.+..++.++|||||||++|+|++|+.||..... ............+.. .
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~-----------~~~~~~~~~~~~~~~---~ 237 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-----------LRALYLIATNGTPEL---Q 237 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH-----------HHhHHHHhcCCCCCC---C
Confidence 33445788999999999988899999999999999999999999853221 111111111111110 0
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||.++|++||++.++++
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 11234456788999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=317.22 Aligned_cols=254 Identities=24% Similarity=0.365 Sum_probs=194.4
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC---CCCceeeEEeeeec-----Cc
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV---RHRNIVKFYGFCSH-----AR 760 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~ 760 (964)
+|++.+.||+|+||+||+|+.+ +++.||+|.++...........+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888899999999999999665 688999999875432222233455677666554 79999999998864 34
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+++ +|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccc
Confidence 58999999985 999998776556689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc---
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--- 917 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 917 (964)
...... ......+++.|+|||++.+..++.++||||+||++|||++|+.||...... +...++..
T Consensus 157 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-----------~~~~~~~~~~~ 224 (288)
T cd07863 157 IYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-----------DQLGKIFDLIG 224 (288)
T ss_pred cccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-----------HHHHHHHHHhC
Confidence 664332 223456789999999999889999999999999999999999998532211 11111100
Q ss_pred ---------------cCC---CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ---------------ARL---PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ---------------~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
... .+.............+.+++.+|+++||++|||+.|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 225 LPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 000001111233456788999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=309.22 Aligned_cols=246 Identities=26% Similarity=0.385 Sum_probs=194.0
Q ss_pred eeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 696 CIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.||+|+||.||+|.+. .+..||+|++.... .....+.+.+|+.++++++||||+++++++.. ...++||||+++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCC
Confidence 3899999999999653 34569999886432 23345678999999999999999999999864 5789999999999
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcc--
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS-- 850 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-- 850 (964)
+|.+++.... ..+++..+.+++.|++.|++|||++ +++||||||+||+++.++.+|++|||++...........
T Consensus 80 ~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 80 PLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 9999986433 3589999999999999999999999 999999999999999999999999999976543322211
Q ss_pred -ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 851 -ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 851 -~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
...+++.|+|||.+.+..++.++||||||+++||+++ |+.||.... ..+....+.....+ + .
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----------~~~~~~~~~~~~~~-~----~ 219 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK-----------GPEVMSFIEQGKRL-D----C 219 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC-----------HHHHHHHHHCCCCC-C----C
Confidence 1223568999999988889999999999999999996 999975322 12222222222111 1 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
...++.++.+++.+||..+|++||++.+|.+.|+.
T Consensus 220 ~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 12334667889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=316.51 Aligned_cols=265 Identities=22% Similarity=0.311 Sum_probs=199.6
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|++|.||+|+.+ +++.||+|++............+.+|+.++++++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999764 688999999865443344456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 769 LERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
++ ++|.+++.... ...+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 58999886533 25688999999999999999999999 999999999999999999999999999976554333
Q ss_pred CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------------CCCCCCChhHHHH
Q 037111 848 NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------------SSLPGANMNEAID 913 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------------~~~~~~~~~~~~~ 913 (964)
......+++.|+|||.+.+. .++.++||||||+++|||+||+.||........ ..++.........
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 33334578899999988654 478899999999999999999999863321100 0000000000000
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.... ................++.+++.+||..||++|||+.+|++
T Consensus 237 ~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 237 NTFP-KWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhcc-ccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 00000000011123456778999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=328.24 Aligned_cols=253 Identities=23% Similarity=0.291 Sum_probs=201.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||+||+|+.+ +++.||+|+++.... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36889999999999999999654 688999999875322 2334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999997652 3588999999999999999999999 99999999999999999999999999998765443
Q ss_pred CC-ccccccccccccccccc------cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 847 SN-WSELAGTYGYVAPELAY------TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 847 ~~-~~~~~g~~~y~aPE~~~------~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
.. .....|++.|+|||++. ...++.++|||||||++|||++|+.||.... ..+....+....
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----------~~~~~~~i~~~~ 225 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT-----------SAKTYNNIMNFQ 225 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC-----------HHHHHHHHHcCC
Confidence 22 23346899999999986 4567899999999999999999999985322 122233332211
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...... ........+.+++.+|+. +|++||+++++++
T Consensus 226 ~~~~~~--~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 226 RFLKFP--EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CccCCC--CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 110000 011233457778889997 9999999999874
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=318.45 Aligned_cols=256 Identities=24% Similarity=0.390 Sum_probs=203.9
Q ss_pred HhhcccccceeecCCceeEEEEEe--------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeee
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL--------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCS 757 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 757 (964)
..++|++.+.||+|+||.||+|+. .++..||+|.+.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 356788999999999999999963 134579999886432 234456788999999999 7999999999999
Q ss_pred cCceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCe
Q 037111 758 HARHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNV 823 (964)
Q Consensus 758 ~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Ni 823 (964)
.....++||||+++|+|.+++.... ...+++..+..++.||++|++|||++ +++||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 9999999999999999999997532 23477888999999999999999999 999999999999
Q ss_pred EECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccC
Q 037111 824 LLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSD 900 (964)
Q Consensus 824 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~ 900 (964)
+++.++.+||+|||.++........ .....+++.|+|||++.+..++.++||||||+++|||++ |..||..
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~------ 242 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------ 242 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCccc------
Confidence 9999999999999999876543222 122345678999999998889999999999999999998 7777632
Q ss_pred CCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 901 SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+....+....... ....+...+.+++.+||+++|++||++.+|++.|+
T Consensus 243 -----~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~ 294 (304)
T cd05101 243 -----IPVEELFKLLKEGHRMD-----KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLD 294 (304)
T ss_pred -----CCHHHHHHHHHcCCcCC-----CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 22223333332221111 11234566888999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=316.82 Aligned_cols=262 Identities=23% Similarity=0.365 Sum_probs=199.7
Q ss_pred ccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeE
Q 037111 691 FDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSF 763 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 763 (964)
|+..+.||+|+||+||++.+ .+++.||+|.+.... .......+.+|++++++++||||+++++++... ...+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 37889999999999988643 357789999986432 223456788999999999999999999988653 4689
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||+++...
T Consensus 85 lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 85 LIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccC
Confidence 999999999999999653 389999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCC---CCCChhHHHHhhhc
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL---PGANMNEAIDHMFD 917 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~ 917 (964)
..... .....++..|+|||.+.+..++.++||||||+++|||+||+.|+........... ..............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence 43221 1122355679999999888899999999999999999999999764322110000 00000011111111
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.....+ .....+..+.+++.+||+++|++||++++|++.|+.
T Consensus 239 ~~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~ 280 (283)
T cd05080 239 RGMRLP----CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE 280 (283)
T ss_pred cCCCCC----CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 111111 112345678899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=311.81 Aligned_cols=248 Identities=27% Similarity=0.398 Sum_probs=189.6
Q ss_pred eeecCCceeEEEEEeCC---CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 696 CIGRGGYGSVYKAELPS---GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.||+|+||.||+|...+ +..+|+|.+..... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 58999999999997543 45789998864332 333457889999999999999999999999999999999999999
Q ss_pred CHHHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC-
Q 037111 773 SLARILSSET---ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN- 848 (964)
Q Consensus 773 sL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~- 848 (964)
+|.+++.... ....++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997532 22456778889999999999999999 9999999999999999999999999999754433221
Q ss_pred -ccccccccccccccccccC-------CCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhh---
Q 037111 849 -WSELAGTYGYVAPELAYTM-------KVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMF--- 916 (964)
Q Consensus 849 -~~~~~g~~~y~aPE~~~~~-------~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 916 (964)
.....+++.|+|||++.+. .++.++||||||+++|||++ |+.||..... .+......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-----------~~~~~~~~~~~ 226 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD-----------EQVLTYTVREQ 226 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh-----------HHHHHHHhhcc
Confidence 1234567889999988642 35789999999999999996 9999853221 11111111
Q ss_pred ccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 917 DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+.+.+... ......+.+++..|| .+|++|||+++|++.|+
T Consensus 227 ~~~~~~~~~~---~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 QLKLPKPRLK---LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCCCCCCccC---CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1112211111 122344667888999 68999999999999886
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=332.50 Aligned_cols=252 Identities=20% Similarity=0.267 Sum_probs=195.5
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||+|+. .+++.||||++.... ........+.+|++++++++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688899999999999999965 478899999986432 12333467888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999654 3488889999999999999999999 99999999999999999999999999986432110
Q ss_pred C-----------------------------------------------CccccccccccccccccccCCCCcchhHHHHH
Q 037111 847 S-----------------------------------------------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFG 879 (964)
Q Consensus 847 ~-----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlG 879 (964)
. ......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0 00023689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCC---CCHHH
Q 037111 880 VLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERR---PNMQI 956 (964)
Q Consensus 880 vll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---Ps~~e 956 (964)
|++|||++|+.||.... ..+....+.......... .......++.+++.+|+. +|.+| +++.+
T Consensus 236 vil~elltG~~Pf~~~~-----------~~~~~~~i~~~~~~~~~p--~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~ 301 (377)
T cd05629 236 AIMFECLIGWPPFCSEN-----------SHETYRKIINWRETLYFP--DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHE 301 (377)
T ss_pred hhhhhhhcCCCCCCCCC-----------HHHHHHHHHccCCccCCC--CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence 99999999999985322 112222222211111000 011223456778889997 66665 58888
Q ss_pred HHH
Q 037111 957 VCK 959 (964)
Q Consensus 957 vl~ 959 (964)
+++
T Consensus 302 ~l~ 304 (377)
T cd05629 302 IKS 304 (377)
T ss_pred Hhc
Confidence 775
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=319.50 Aligned_cols=245 Identities=25% Similarity=0.430 Sum_probs=199.7
Q ss_pred ccccceeecCCceeEEEEEe-CCCCeEEEEEeccc-cCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSF-TGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
|+..+-||.|+||.||.|+. .+.+.||||++... ....+...++..|+..+++++|||++.+.|||..+...|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 55567799999999999965 46788999998643 22344557899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
|-| +-.|.+.... .++.+..+..|..+.++||+|||++ +.||||||+.|||+++.|.||++|||.|..+.+..
T Consensus 108 ClG-SAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn-- 180 (948)
T KOG0577|consen 108 CLG-SASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN-- 180 (948)
T ss_pred Hhc-cHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCchh--
Confidence 965 8888876543 4588889999999999999999999 99999999999999999999999999998876553
Q ss_pred ccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 849 WSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.++|||.|||||++. .+.|+-++||||+|++-.|+...++|...... -..+..+....-| ..
T Consensus 181 --sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-----------MSALYHIAQNesP-tL- 245 (948)
T KOG0577|consen 181 --SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----------MSALYHIAQNESP-TL- 245 (948)
T ss_pred --cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-----------HHHHHHHHhcCCC-CC-
Confidence 468999999999986 46799999999999999999999999532221 1222333222111 11
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+....+..++..|+.+-|++|||..++++
T Consensus 246 --qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 246 --QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred --CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 12355566778888999999999999998875
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=309.47 Aligned_cols=252 Identities=22% Similarity=0.334 Sum_probs=202.2
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCc---hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGE---TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|+..+.||+|++|.||+|.. .++++||+|.+...... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688999999999999999965 46899999998643221 2234568889999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.++....
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 999999999999996543 478888999999999999999999 999999999999999999999999999876543
Q ss_pred CCCCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 845 DSSNW---SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 845 ~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
..... ....++..|+|||.+.+..++.++||||+|+++|||++|+.||..... .............
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----------~~~~~~~~~~~~~ 225 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA-----------MAAIFKIATQPTN 225 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch-----------HHHHHHHhccCCC
Confidence 22111 234577899999999998899999999999999999999999853211 1111222111111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
+. ........+.+++.+||..+|++||++.++++.
T Consensus 226 ~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 PQ----LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CC----CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11 112344567888999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=309.19 Aligned_cols=246 Identities=29% Similarity=0.412 Sum_probs=195.7
Q ss_pred ceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEecc
Q 037111 695 FCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLE 770 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (964)
+.||+|+||.||+|.+.. +..||+|.+...... ...+++.+|+.+++.++||||+++++++. ....++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 369999999999996532 268999998754332 34567899999999999999999999876 456899999999
Q ss_pred CCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcc
Q 037111 771 RGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850 (964)
Q Consensus 771 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 850 (964)
+|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++..........
T Consensus 79 ~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 79 LGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 999999997654 588999999999999999999999 999999999999999999999999999986654432221
Q ss_pred ---ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 851 ---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 851 ---~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+....+.... +.+
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~-----------~~~~~~~~~~~~-~~~--- 218 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK-----------GAEVIAMLESGE-RLP--- 218 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC-----------HHHHHHHHHcCC-cCC---
Confidence 1123467999999998889999999999999999998 999975322 112222221111 111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....++..+.+++.+||..+|++||++.++++.|++
T Consensus 219 -~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 219 -RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred -CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 112334568899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=318.45 Aligned_cols=255 Identities=23% Similarity=0.388 Sum_probs=201.8
Q ss_pred hhcccccceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
.++|.+.+.||+|+||.||+|+.. +...||+|.+.... ......++..|+.+++.+ +||||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 367999999999999999999652 23469999987432 233456788899999999 79999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 759 ARHSFLVYEYLERGSLARILSSETA--------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
.+..++||||+++|+|.+++..... ..+++..+.+++.|++.|++|||++ +++||||||+||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 172 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 172 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheE
Confidence 9999999999999999999975421 3478899999999999999999998 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCCCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSSNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
++.++.+|++|||.++......... ....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~------ 246 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------ 246 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC------
Confidence 9999999999999987654322111 12234568999999998889999999999999999998 78886421
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+....+.... ..+ .......++.+++.+||+.+|++||++.+|++.|.
T Consensus 247 -----~~~~~~~~~~~~~-~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~ 297 (307)
T cd05098 247 -----PVEELFKLLKEGH-RMD----KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 297 (307)
T ss_pred -----CHHHHHHHHHcCC-CCC----CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 1222222222211 111 11234456788899999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=331.75 Aligned_cols=249 Identities=21% Similarity=0.274 Sum_probs=193.3
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.|+..+.||+|+||+||+|+. .+++.||+|++..... .......+.+|+.++++++||||+++++++.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999965 4688999999864321 23334678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS- 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 846 (964)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 999999999996543 478888999999999999999999 99999999999999999999999999975321100
Q ss_pred ----------------------------------------------CCccccccccccccccccccCCCCcchhHHHHHH
Q 037111 847 ----------------------------------------------SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGV 880 (964)
Q Consensus 847 ----------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGv 880 (964)
.......||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 0011246899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc--cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCC---HH
Q 037111 881 LALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN---MQ 955 (964)
Q Consensus 881 ll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs---~~ 955 (964)
++|||++|+.||.... ..+....+.. .....+.. .....+..+++.+|+ .+|++|++ ++
T Consensus 237 il~elltG~~Pf~~~~-----------~~~~~~~i~~~~~~~~~p~~----~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 237 ILYEMLVGQPPFLAQT-----------PLETQMKVINWQTSLHIPPQ----AKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred HHHHHHhCCCCCCCCC-----------HHHHHHHHHccCCCcCCCCc----ccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 9999999999985322 1122222222 11111111 112234556666665 59999997 77
Q ss_pred HHHH
Q 037111 956 IVCK 959 (964)
Q Consensus 956 evl~ 959 (964)
++++
T Consensus 301 ei~~ 304 (382)
T cd05625 301 EIKA 304 (382)
T ss_pred HHhc
Confidence 7653
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=315.45 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=200.8
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc-hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE-TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.|+..+.||+|+||.||++... +++.||+|.+...... ......+..|+.++++++|++++++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677889999999999999654 6889999998643222 2223557789999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 99999999999765556689999999999999999999998 99999999999999999999999999987654332
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... ...+........ .+..
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~--------~~~~~~~~~~~~-~~~~---- 223 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK--------IKREEVERLVKE-VQEE---- 223 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc--------chHHHHHhhhhh-hhhh----
Confidence 223347899999999999999999999999999999999999998642210 001111111111 0100
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPN-----MQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl~ 959 (964)
........+.+++.+||+.||++||| ++|+++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 224 YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 11123345778889999999999999 778765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=309.26 Aligned_cols=252 Identities=23% Similarity=0.424 Sum_probs=204.5
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|...++..||+|.+... ......+.+|+.++++++|+||+++++++.+ ...++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 3578899999999999999998877888999987632 2234678899999999999999999999987 77899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||.+........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 99999999999876556688999999999999999999998 999999999999999999999999999976543322
Q ss_pred C-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 848 N-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 848 ~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
. .....++..|+|||++....++.++|||||||++|++++ |+.||.... .......+.. ..+.+
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-----------~~~~~~~~~~-~~~~~-- 223 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-----------NPEVIRALER-GYRMP-- 223 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC-----------HHHHHHHHhC-CCCCC--
Confidence 1 122345678999999998889999999999999999999 888875221 1122222211 11111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.....+..+.+++.+||+++|++||++.++.+.|+
T Consensus 224 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 224 --RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred --CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 11234456888999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=314.43 Aligned_cols=256 Identities=22% Similarity=0.360 Sum_probs=204.9
Q ss_pred HhhcccccceeecCCceeEEEEEeCC-----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-Cc
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELPS-----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-AR 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 760 (964)
..++|+..+.||+|+||.||+|...+ +..|++|++... ........+.+|+.++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 34678999999999999999998765 678999987642 344446778899999999999999999998766 46
Q ss_pred eeEEEEEeccCCCHHHHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 761 HSFLVYEYLERGSLARILSSETA------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
..++++||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEEC
Confidence 78999999999999999965422 4588999999999999999999999 99999999999999999999999
Q ss_pred ccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHH
Q 037111 835 DFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEA 911 (964)
Q Consensus 835 Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 911 (964)
|||+++.+...... .....++..|+|||++.+..++.++||||||+++||+++ |+.||..... .+.
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----------~~~ 228 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-----------FEM 228 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-----------HHH
Confidence 99999866443221 122345678999999998889999999999999999999 9999753221 122
Q ss_pred HHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+... ..... ...++..+.+++.+||..||++|||+.+|++.|+
T Consensus 229 ~~~~~~~-~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 229 AAYLKDG-YRLAQ----PINCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred HHHHHcC-CCCCC----CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 2222221 11111 1123456888999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=309.56 Aligned_cols=249 Identities=27% Similarity=0.443 Sum_probs=204.1
Q ss_pred hcccccceeecCCceeEEEEEeCC-CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||.||+|...+ ++.||+|.+.... ...++.+|++++++++||||+++++++..+...|+++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 578899999999999999998764 7899999986432 15789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 79 ~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 79 YCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred cCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 999999999996543 4589999999999999999999999 999999999999999999999999999987655443
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||...... +....+.. ...+. ..
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~-----------~~~~~~~~-~~~~~--~~ 220 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM-----------RAIFMIPN-KPPPT--LS 220 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh-----------hhhhhhcc-CCCCC--CC
Confidence 334456788999999999889999999999999999999999998643221 11111111 11111 01
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||+.+|++||++.+|++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 221 DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 12234456888999999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=332.93 Aligned_cols=249 Identities=21% Similarity=0.279 Sum_probs=194.7
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
+|++.+.||+|+||.||+|+.+ +++.||||++..... .......+.+|++++++++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6889999999999999999654 688999999864321 22234668899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS- 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 846 (964)
|+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|..+....
T Consensus 82 ~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 82 YIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 999999999996543 478888899999999999999999 99999999999999999999999999975321000
Q ss_pred ------------------------------------------CCccccccccccccccccccCCCCcchhHHHHHHHHHH
Q 037111 847 ------------------------------------------SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALE 884 (964)
Q Consensus 847 ------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~e 884 (964)
.......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 00112468999999999999999999999999999999
Q ss_pred HHhCCCCCCccccccCCCCCCCChhHHHHhhhcc--CCCCCccccchHHHHHHHHHHHHHccCCCCCCCC---CHHHHHH
Q 037111 885 VIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA--RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP---NMQIVCK 959 (964)
Q Consensus 885 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP---s~~evl~ 959 (964)
|++|+.||..... .+....+... ....+. .......+.+++.+|+ .+|++|+ ++.++++
T Consensus 237 ll~G~~Pf~~~~~-----------~~~~~~i~~~~~~~~~~~----~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 237 MLVGQPPFLADTP-----------AETQLKVINWETTLHIPS----QAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred hhhCCCCCCCCCH-----------HHHHHHHhccCccccCCC----CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999999863221 1222222211 111111 1122344566677766 5999999 8888764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=312.48 Aligned_cols=252 Identities=24% Similarity=0.403 Sum_probs=199.2
Q ss_pred hcccccceeecCCceeEEEEEeC-CCC----eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||+||+|++. +++ .||+|++... .......++.+|+.+++.++||||+++++++... ..+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 57888999999999999999753 444 4899988643 2334456788999999999999999999999754 578
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+++||+++|+|.+++.... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999996543 3588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
...... ....+++.|+|||...+..++.++|||||||++|||++ |..||+.... ......+.....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----------~~~~~~~~~~~~ 229 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-----------REIPDLLEKGER 229 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----------HHHHHHHHCCCc
Confidence 433221 12234678999999998899999999999999999998 8888753211 111111111111
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
++. ......++.+++.+||+.||++||++.++++.|+
T Consensus 230 ~~~-----~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 230 LPQ-----PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred CCC-----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 1224456888999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=308.91 Aligned_cols=248 Identities=29% Similarity=0.475 Sum_probs=203.5
Q ss_pred ceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEecc
Q 037111 695 FCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLE 770 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (964)
+.||+|+||.||+|.... +..||+|.+....... ..+.+.+|+..++.++|+||+++++++......++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 368999999999997653 7889999987543322 46788999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 771 RGSLARILSSET-------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 771 ~gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+++|.+++.... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccccc
Confidence 999999997642 35689999999999999999999998 99999999999999999999999999998776
Q ss_pred CCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDS--SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
... .......+++.|+|||.+....++.++||||+|+++|||++ |..||... ...+..+.+.....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----------~~~~~~~~~~~~~~ 225 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL-----------SNEEVLEYLRKGYR 225 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC-----------CHHHHHHHHHcCCC
Confidence 543 22234457889999999988889999999999999999999 68887533 12233333332211
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.. .....+.++.+++.+||+.+|++||++.++++.|+
T Consensus 226 ~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 LP-----KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CC-----CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11 11233567889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=319.32 Aligned_cols=266 Identities=18% Similarity=0.268 Sum_probs=198.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.+ +++.||+|.+..... ......+.+|+..++.++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc-cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 457999999999999999999765 678999999864322 223346778999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++ ++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 84 e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 84 EYLD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred eccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 9997 59999886543 3478899999999999999999999 99999999999999999999999999997654433
Q ss_pred CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------CCC-CCChhHHHHh--h
Q 037111 847 SNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------SLP-GANMNEAIDH--M 915 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------~~~-~~~~~~~~~~--~ 915 (964)
.......+++.|+|||.+.+. .++.++|||||||++|||++|+.||......... ..+ .......... .
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccc
Confidence 333345678899999988653 4788999999999999999999998643211000 000 0000000000 0
Q ss_pred hccCCC---CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 FDARLP---PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 ~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+ ..............+.+++.+|++.||.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000 00000011123345778999999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=317.96 Aligned_cols=255 Identities=23% Similarity=0.401 Sum_probs=199.1
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCC--eEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCcee
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGD--TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 762 (964)
.+++|++.+.||+|+||.||+|..+ ++. .+|+|.++.. ........+.+|+.++.++ +||||+++++++..++..
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 3567899999999999999999764 454 4577776532 2334456788999999999 899999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC
Q 037111 763 FLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE 828 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~ 828 (964)
|+||||+++|+|.+++.... ...+++.+++.++.|++.|++|||++ +++||||||+||+++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 99999999999999997532 23478899999999999999999999 99999999999999999
Q ss_pred CceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCC
Q 037111 829 YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGAN 907 (964)
Q Consensus 829 ~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~ 907 (964)
+.+||+|||++........ .....++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 161 ~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~----------- 228 (303)
T cd05088 161 YVAKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT----------- 228 (303)
T ss_pred CcEEeCccccCcccchhhh-cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC-----------
Confidence 9999999999864321111 111234567999999988889999999999999999998 999975221
Q ss_pred hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 908 MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+........ ...+ ........+.+++.+||+.+|++||++++++..|+
T Consensus 229 ~~~~~~~~~~~-~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 229 CAELYEKLPQG-YRLE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred hHHHHHHHhcC-CcCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11222222111 1111 01123446788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=309.80 Aligned_cols=254 Identities=28% Similarity=0.483 Sum_probs=203.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCC---eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|+..+.||+|+||.||+|..+ +++ .||+|.+.... .....+.+..|++++++++|||++++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 46888899999999999999765 233 68999886432 23345678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999996543 4588999999999999999999999 999999999999999999999999999976643
Q ss_pred CCCCc-c--ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 DSSNW-S--ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~~~~~-~--~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
..... . ....++.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....+....
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~-----------~~~~~~~i~~~~- 227 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS-----------NHEVMKAINDGF- 227 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC-----------HHHHHHHHhcCC-
Confidence 32211 1 1123457999999988889999999999999999997 999975221 122333332221
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..+. ..+.+..+.+++.+||..+|++||++.+|++.|+.
T Consensus 228 ~~~~----~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 228 RLPA----PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCCC----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 1111 12345668899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=315.65 Aligned_cols=259 Identities=24% Similarity=0.374 Sum_probs=203.0
Q ss_pred hhcccccceeecCCceeEEEEEeCC-----------------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS-----------------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 750 (964)
..+|++.+.||+|+||.||+|+.++ +..||+|.+.... .......+.+|++++++++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 3578999999999999999986542 2458999886432 234457889999999999999999
Q ss_pred eEEeeeecCceeEEEEEeccCCCHHHHhhhcC---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCC
Q 037111 751 KFYGFCSHARHSFLVYEYLERGSLARILSSET---------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSK 821 (964)
Q Consensus 751 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~ 821 (964)
++++++..+...++||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~ 159 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATR 159 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchh
Confidence 99999999999999999999999999997543 12588999999999999999999999 9999999999
Q ss_pred CeEECCCCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCcccc
Q 037111 822 NVLLDFEYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GQHPKDLLSS 897 (964)
Q Consensus 822 Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t--g~~p~~~~~~ 897 (964)
||+++.++.++++|||.++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~- 238 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT- 238 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC-
Confidence 99999999999999999976543321 1223446778999999988889999999999999999998 666764221
Q ss_pred ccCCCCCCCChhHHHHhhhcc---CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 898 LSDSSLPGANMNEAIDHMFDA---RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
........... ..... ........+.++.+++.+||+.||++||++++|++.|+
T Consensus 239 ----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 239 ----------DQQVIENAGHFFRDDGRQI-YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred ----------hHHHHHHHHhccccccccc-cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 11222221111 00000 00011223457889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=313.38 Aligned_cols=252 Identities=25% Similarity=0.390 Sum_probs=199.8
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC-----
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA----- 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----- 759 (964)
+.+.|+..+.||+|+||.||+|..+ +++.||+|++.... .....+..|+.+++++ +||||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 4567888899999999999999754 67889999986432 2345778899999988 699999999998653
Q ss_pred -ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 760 -RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 760 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
...++||||+++|+|.+++.......+++..+..++.|++.|++|||++ +|+||||+|+||++++++.++|+|||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCC
Confidence 4689999999999999999875556689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
+..............|++.|+|||++. +..++.++||||+||++|||++|+.||..... .....
T Consensus 158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~-----------~~~~~ 226 (272)
T cd06637 158 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-----------MRALF 226 (272)
T ss_pred ceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH-----------HHHHH
Confidence 986554333344567889999999986 34588899999999999999999999853221 01111
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.. .....+..+.+++.+||..+|++||+++++++
T Consensus 227 ~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 227 LIPRNPAPRL----KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHhcCCCCCC----CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 1111111100 11123456788999999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=345.71 Aligned_cols=257 Identities=20% Similarity=0.349 Sum_probs=201.0
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--Ccee
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH--ARHS 762 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 762 (964)
...++|++.+.||+|+||+||+|... ++..||+|.+............+..|+.++++++|||||+++++|.+ ...+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 45678999999999999999999765 56788999887544445556788999999999999999999998854 3578
Q ss_pred EEEEEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCC----CCCeEeccCCCCCeEECCC--------
Q 037111 763 FLVYEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHEC----RPPIVHRDVSSKNVLLDFE-------- 828 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~----~~~iiH~dlkp~Nill~~~-------- 828 (964)
|+||||+++|+|.+++... ....+++..++.|+.||+.||+|||+.. ..+||||||||+|||++.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999999999752 2345899999999999999999999852 1259999999999999642
Q ss_pred ---------CceEEeccCcccccCCCCCCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 037111 829 ---------YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDLLSS 897 (964)
Q Consensus 829 ---------~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~~~~ 897 (964)
+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~- 247 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN- 247 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-
Confidence 348999999998664332 2234578999999999864 458899999999999999999999985321
Q ss_pred ccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 898 LSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+..+......+. .....++.+++..||..+|++||++.+++.
T Consensus 248 ---------~~~qli~~lk~~p~lpi------~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 ---------NFSQLISELKRGPDLPI------KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred ---------cHHHHHHHHhcCCCCCc------CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 11222222222111110 122456788999999999999999999873
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=312.85 Aligned_cols=250 Identities=23% Similarity=0.325 Sum_probs=198.3
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... ......++.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 578889999999999999965 578899999986432 233456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--
Confidence 9999997652 367888899999999999999999 99999999999999999999999999997654332
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....+++.|+|||++.+..++.++||||||+++|+|++|+.||.......... ...+....+.....+ .. .
T Consensus 150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~-~~---~ 221 (279)
T cd06619 150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL----MPLQLLQCIVDEDPP-VL---P 221 (279)
T ss_pred ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc----chHHHHHHHhccCCC-CC---C
Confidence 234578899999999999899999999999999999999999986433211111 111112222111111 10 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......++.+++.+|++.+|++||+++++++
T Consensus 222 ~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 222 VGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred CCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1123345788899999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=317.89 Aligned_cols=256 Identities=23% Similarity=0.400 Sum_probs=202.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeee
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCS 757 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 757 (964)
..++|.+.+.||+|+||.||+|+.. ....||+|.++... .......+..|+.+++++ +||||+++++++.
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 3467889999999999999999642 24568999886432 234456788999999999 6999999999999
Q ss_pred cCceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCe
Q 037111 758 HARHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNV 823 (964)
Q Consensus 758 ~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Ni 823 (964)
+.+..++||||+++|+|.+++.... ...+++..+.+++.|++.|++|||++ +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence 9999999999999999999996532 23478899999999999999999998 999999999999
Q ss_pred EECCCCceEEeccCcccccCCCCCCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccC
Q 037111 824 LLDFEYEAHVSDFGTAKLLKPDSSNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSD 900 (964)
Q Consensus 824 ll~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~ 900 (964)
+++.++.+|++|||.++......... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~----- 240 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI----- 240 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC-----
Confidence 99999999999999998665332211 12234467999999998889999999999999999999 88886421
Q ss_pred CCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 901 SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+....+....... ....++.++.+++.+||+.+|++||++.++++.|.
T Consensus 241 ------~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 291 (314)
T cd05099 241 ------PVEELFKLLREGHRMD-----KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALD 291 (314)
T ss_pred ------CHHHHHHHHHcCCCCC-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1222233222221111 11233456778999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=316.38 Aligned_cols=261 Identities=23% Similarity=0.371 Sum_probs=199.3
Q ss_pred hcccccceeecCCceeEEEEEeCC---------------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS---------------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 753 (964)
++|++.+.||+|+||.||+++.+. ...||+|++... ........+.+|++++++++|||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 578999999999999999986532 124899998643 2333456789999999999999999999
Q ss_pred eeeecCceeEEEEEeccCCCHHHHhhhcC----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCe
Q 037111 754 GFCSHARHSFLVYEYLERGSLARILSSET----------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNV 823 (964)
Q Consensus 754 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Ni 823 (964)
+++......++||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 99999999999999999999999996432 12367889999999999999999999 999999999999
Q ss_pred EECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCcccccc
Q 037111 824 LLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GQHPKDLLSSLS 899 (964)
Q Consensus 824 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t--g~~p~~~~~~~~ 899 (964)
+++.++.+|++|||++......... .....+++.|+|||...++.++.++|||||||++|+|++ |..||.....
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~-- 238 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD-- 238 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh--
Confidence 9999999999999999765433211 122345678999999998889999999999999999998 5566543211
Q ss_pred CCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 900 DSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
........+.......... .......+..+.+++.+||..||++||++++|++.|+
T Consensus 239 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 239 ------EQVIENTGEFFRNQGRQIY-LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ------HHHHHHHHHhhhhcccccc-CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0000111111111000000 0011123456889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=307.77 Aligned_cols=248 Identities=26% Similarity=0.435 Sum_probs=201.5
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
.+|++.+.||+|+||.||+|.. +++.||+|.+... .....+.+|+.++++++|||++++++++... ..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD----VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc----chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence 5689999999999999999975 5788999998632 2235788999999999999999999998764 47999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.......+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-- 154 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV-- 154 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC--
Confidence 9999999999876656689999999999999999999998 99999999999999999999999999987543221
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....+..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+....+... ..++.
T Consensus 155 -~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----------~~~~~~~~~~~-~~~~~--- 218 (254)
T cd05083 155 -DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-----------LKEVKECVEKG-YRMEP--- 218 (254)
T ss_pred -CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC-----------HHHHHHHHhCC-CCCCC---
Confidence 12234568999999988889999999999999999997 888875321 12222222221 11111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~~ 964 (964)
....+..+.+++.+||+.+|++||+++++++.|+.|
T Consensus 219 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 254 (254)
T cd05083 219 -PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEKE 254 (254)
T ss_pred -CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHccC
Confidence 123445678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=328.03 Aligned_cols=264 Identities=22% Similarity=0.335 Sum_probs=198.7
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-----eeE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-----HSF 763 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 763 (964)
+|+..+.||+|+||.||+|.. .+++.||||++..........+.+.+|+.+++.++||||+++++++.... ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999975 47899999998654334444567889999999999999999999998776 789
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+. ++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999997 5888887543 3588999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCC-CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------CCCCC-Ch----h
Q 037111 844 PDSS-NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------SLPGA-NM----N 909 (964)
Q Consensus 844 ~~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------~~~~~-~~----~ 909 (964)
.... ......+++.|+|||.+.+. .++.++||||+||++|||++|+.||......... ..+.. .. .
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 3322 22344678899999998774 4789999999999999999999998643221000 00000 00 0
Q ss_pred HHHHhhhccCCCCCccc---cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 910 EAIDHMFDARLPPPWLE---VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+......++... ........++.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00011111111111000 001122456788999999999999999999985
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=314.28 Aligned_cols=262 Identities=24% Similarity=0.368 Sum_probs=206.6
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|... +++.||+|++... ........+.+|+++++.++||||+++++++......++||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIG-AKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEec-CcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 357888999999999999999654 6888999987643 23344578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ..+++..+..++.+++.|+.|||+.+ +++||||+|+||+++.++.++|+|||++.......
T Consensus 83 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 83 EFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred ecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 999999999998654 34889999999999999999999732 89999999999999999999999999986543222
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.....|+..|+|||++.+..++.++|||||||++|+|++|+.||.................+....+.....+..
T Consensus 159 --~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 233 (284)
T cd06620 159 --ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL--- 233 (284)
T ss_pred --cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCC---
Confidence 123468899999999988889999999999999999999999987543322111111111122233322221111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
.....+.++.+++.+||++||++||++.||++.
T Consensus 234 -~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 234 -PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred -CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 112345678899999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-35 Score=326.75 Aligned_cols=257 Identities=21% Similarity=0.312 Sum_probs=199.6
Q ss_pred HHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 684 IIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 684 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.....++|++.+.||+|+||.||+|+.+ +++.||+|.+.... ........+.+|+.+++.++||||+++++++.++..
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 3445678999999999999999999765 67889999986422 222334567889999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence 99999999999999998643 378888899999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CccccccccccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 842 LKPDSS-NWSELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 842 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
...... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||.... .......+.
T Consensus 192 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-----------~~~~~~~i~ 260 (371)
T cd05622 192 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----------LVGTYSKIM 260 (371)
T ss_pred cCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC-----------HHHHHHHHH
Confidence 654322 223557999999999987543 7889999999999999999999986322 122333333
Q ss_pred ccCCCCCccccchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 037111 917 DARLPPPWLEVGVEDKLKSIIEVALSCVDANPER--RPNMQIVCK 959 (964)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPs~~evl~ 959 (964)
......... ........+.+++.+|+..++.+ ||+++++++
T Consensus 261 ~~~~~~~~~--~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 261 NHKNSLTFP--DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 303 (371)
T ss_pred cCCCcccCC--CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence 221111100 11123445677888999744433 778888876
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=307.68 Aligned_cols=248 Identities=25% Similarity=0.398 Sum_probs=199.4
Q ss_pred ceeecCCceeEEEEEeCC--C--CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEecc
Q 037111 695 FCIGRGGYGSVYKAELPS--G--DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLE 770 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (964)
+.||+|++|.||+|.+.+ + ..||+|.+...... ...+.+..|+..+++++||||+++++++.. ...++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 368999999999997643 2 26899998754332 456789999999999999999999999988 88999999999
Q ss_pred CCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC--
Q 037111 771 RGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN-- 848 (964)
Q Consensus 771 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-- 848 (964)
+|+|.+++.......+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+|++|||++.........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 99999999765435689999999999999999999999 9999999999999999999999999999876543221
Q ss_pred -ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 849 -WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 849 -~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..+....+.......+
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----------~~~~~~~~~~~~~~~~--- 221 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS-----------GSQILKKIDKEGERLE--- 221 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHhcCCcCC---
Confidence 112346778999999998889999999999999999998 999975221 1222222221111111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.....+..+.+++.+||+.+|++||++.++++.|.
T Consensus 222 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 -RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 11234466889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=310.21 Aligned_cols=253 Identities=28% Similarity=0.510 Sum_probs=202.3
Q ss_pred hcccccceeecCCceeEEEEEeC-CC---CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SG---DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
..|+..+.||+|+||.||+|..+ ++ ..||||.+.... ......+|..|+..+++++||||+++++++.++...++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 45788999999999999999764 23 359999986432 34445789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.....
T Consensus 83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 83 ITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 999999999999997543 3588999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCC--cc-ccc--cccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 845 DSSN--WS-ELA--GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 845 ~~~~--~~-~~~--g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
.... .. ... .+..|+|||.+.+..++.++|||||||++|||++ |..||.... ..+....+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~-----------~~~~~~~i~~~ 227 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-----------NQDVINAIEQD 227 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC-----------HHHHHHHHHcC
Confidence 3221 11 111 2457999999998899999999999999999986 999975322 11222222111
Q ss_pred -CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 919 -RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 919 -~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
+.+.+ .+++..+.+++.+||..+|++||++++|+..|++
T Consensus 228 ~~~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 228 YRLPPP------MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred CcCCCc------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 11211 2344567889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=307.09 Aligned_cols=253 Identities=27% Similarity=0.429 Sum_probs=205.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.+....+++||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP--GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc--hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence 57889999999999999999764 57889999986432 2245788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 156 (262)
T cd06613 81 YCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA 156 (262)
T ss_pred CCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence 999999999986542 3488999999999999999999998 999999999999999999999999999976654433
Q ss_pred CccccccccccccccccccC---CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 NWSELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~---~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
......++..|+|||.+.+. .++.++||||||+++|||++|+.||..... .+..........+++.
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~-----------~~~~~~~~~~~~~~~~ 225 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP-----------MRALFLISKSNFPPPK 225 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhccCCCcc
Confidence 33445688899999998876 789999999999999999999999753221 1112222122112111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ........++.+++.+||..+|++||++.+|++
T Consensus 226 ~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 L-KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred c-cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1 112344567889999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=311.67 Aligned_cols=249 Identities=27% Similarity=0.440 Sum_probs=204.3
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||.|++|.||+|... +++.||+|.+.... .......+.+|+.+++.++||||+++++++.++...++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 36888899999999999999765 68899999986432 23345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++... ++++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.++.......
T Consensus 80 ~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 80 YCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred eeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence 99999999999654 589999999999999999999999 999999999999999999999999999987765533
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......+++.|+|||.+.+..++.++||||||+++|+|+||+.||..... .+....+... .++.....
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----------~~~~~~~~~~-~~~~~~~~ 221 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-----------MRVLFLIPKN-NPPSLEGN 221 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-----------HHHHHHhhhc-CCCCCccc
Confidence 34455788899999999988899999999999999999999999853221 1111111111 11111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+.+++.+||..+|++||+++++++
T Consensus 222 ---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 222 ---KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ---ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 14456788999999999999999999975
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=312.97 Aligned_cols=252 Identities=21% Similarity=0.266 Sum_probs=199.2
Q ss_pred ccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
|+..+.||+|+||+||+|.. .+++.||+|.+..... .......+.+|++++++++|++|+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 66778899999999999965 4688999999864322 222335578899999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~ 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-S 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-c
Confidence 9999999998765555699999999999999999999999 99999999999999999999999999987654322 2
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....|+..|+|||++.+..++.++|+||+|+++|||++|+.||...... ................ .
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~-------~~~~~~~~~~~~~~~~------~ 224 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK-------VKREEVDRRVLETEEV------Y 224 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHhhhccccc------c
Confidence 23457899999999999889999999999999999999999998532110 0001111111111111 1
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPN-----MQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl~ 959 (964)
.......+.+++.+|++.||++||+ ++++++
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 225 SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 1223345778889999999999999 566654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=314.33 Aligned_cols=264 Identities=23% Similarity=0.377 Sum_probs=202.7
Q ss_pred cccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--cee
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHS 762 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 762 (964)
.|++.+.||+|+||.||+++. .++..||+|.++... .......+.+|+.++++++|||++++++++... ...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 478889999999999999964 357889999986432 333456789999999999999999999998775 568
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++||||+++++|.+++.+.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999999996543 3488999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC----CCCCCChhHHHHhh
Q 037111 843 KPDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS----SLPGANMNEAIDHM 915 (964)
Q Consensus 843 ~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~ 915 (964)
...... .....++..|+|||.+.+..++.++||||||+++|||++++.|.......... ..............
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL 239 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence 543221 12345667899999998888999999999999999999987764321110000 00011111122222
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
......+. ....+..+.+++.+||+.+|++||+++++++.|+.
T Consensus 240 ~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 240 EEGKRLPR-----PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred HcCccCCC-----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 11111111 12345678899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=322.85 Aligned_cols=264 Identities=22% Similarity=0.334 Sum_probs=197.8
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-----
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----- 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 760 (964)
..++|+..+.||+|+||.||+|.. .+|+.||||++............+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999965 46889999998754444455567889999999999999999999986543
Q ss_pred -eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 761 -HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 761 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 57999999976 67766632 377888999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------CCCCCCChh---
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------SSLPGANMN--- 909 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------~~~~~~~~~--- 909 (964)
+..... .......|++.|+|||.+.+..++.++||||+||++|+|++|+.||........ ...+.....
T Consensus 171 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 171 RTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred cccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 754332 222345689999999999999999999999999999999999999864322100 000000000
Q ss_pred -HHHHhhhc--cCCCC--------Cc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 910 -EAIDHMFD--ARLPP--------PW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 910 -~~~~~~~~--~~~~~--------~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........ ...+. .+ ...........+.+++.+||..||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 00000 00 00001112345788999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=315.05 Aligned_cols=249 Identities=24% Similarity=0.422 Sum_probs=202.4
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++||||+++++++..++..++|||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence 5799999999999999999975 478999999986432 2234668899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++++|||.+........
T Consensus 97 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 97 YLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred ccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 99999999998543 378889999999999999999999 999999999999999999999999999977654443
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......+++.|+|||.+.+..++.++|||||||++|+|++|+.||........ .........+.. .
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-----------~~~~~~~~~~~~---~ 236 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----------LYLIATNGTPEL---Q 236 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-----------eeeeccCCCCCC---C
Confidence 33445688899999999998899999999999999999999999854322110 000000011100 0
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||..+|++||+++++++
T Consensus 237 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 237 NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11223455778889999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=310.60 Aligned_cols=252 Identities=25% Similarity=0.390 Sum_probs=199.9
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||.||+|+. .+++.||+|.++... ......+.+|+.+++.++||||+++++++..++..++|||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 4688888999999999999965 468899999986432 2234567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++.... .+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+........
T Consensus 87 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 87 FCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred ccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 999999999986543 488999999999999999999999 999999999999999999999999999876654433
Q ss_pred Cccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 NWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
......|++.|+|||.+. ...++.++||||+||++|+|++|+.||...... ............++.
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-----------~~~~~~~~~~~~~~~ 230 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-----------RALFLMTKSNFQPPK 230 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch-----------hhHHhhhccCCCCCc
Confidence 334557899999999874 455888999999999999999999997432210 111111111111111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. .....+..+.+++.+|+..+|++||+++++++
T Consensus 231 ~~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 231 LK-DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cc-ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 11 01123345788999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=311.82 Aligned_cols=251 Identities=22% Similarity=0.353 Sum_probs=201.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
+.|++.+.||+|+||.||+|+.. +++.||+|.+... .....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 46888999999999999999765 5889999998642 33445678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|..++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+........
T Consensus 90 ~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 90 FCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred cCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence 999999998875433 3488999999999999999999998 999999999999999999999999999876543333
Q ss_pred Cccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 848 NWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
......+++.|+|||.+. ...++.++|||||||++|||++|+.||..... .+....+.....+.
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----------~~~~~~~~~~~~~~ 234 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----------MRVLLKIAKSEPPT 234 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----------HHHHHHHhcCCCcc
Confidence 334556888999999985 34578899999999999999999999753221 12222222221111
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ........++.+++.+||+.+|++||++.++++
T Consensus 235 ~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 235 L---SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred C---CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0 111234456788999999999999999999975
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=318.75 Aligned_cols=199 Identities=22% Similarity=0.312 Sum_probs=167.3
Q ss_pred ccceeecC--CceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 693 ESFCIGRG--GYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 693 ~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
+.++||+| +||+||++.. ++|+.||+|++............+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45679999 6889999965 57899999998754333444567788999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC-
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN- 848 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~- 848 (964)
++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.++++||+.+.........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999999765555689999999999999999999999 9999999999999999999999999865433221111
Q ss_pred ------cccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 849 ------WSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 849 ------~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 112346678999999876 4588999999999999999999999864
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=314.23 Aligned_cols=256 Identities=25% Similarity=0.412 Sum_probs=199.5
Q ss_pred hcccccceeecCCceeEEEEEeC-----------------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-----------------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 751 (964)
++|++.+.||+|+||.||++... ++..||+|++... ........+.+|+.+++.++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999998532 2346899988643 23334567899999999999999999
Q ss_pred EEeeeecCceeEEEEEeccCCCHHHHhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCC
Q 037111 752 FYGFCSHARHSFLVYEYLERGSLARILSSETA---------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKN 822 (964)
Q Consensus 752 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~N 822 (964)
+++++...+..++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 99999999999999999999999999975321 2367788999999999999999999 99999999999
Q ss_pred eEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCccccc
Q 037111 823 VLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GQHPKDLLSSL 898 (964)
Q Consensus 823 ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t--g~~p~~~~~~~ 898 (964)
|+++.++.++++|||+++.+...... .....+++.|+|||...++.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 99999999999999999765433211 112234678999999888889999999999999999998 66776532211
Q ss_pred cCCCCCCCChhHHHHhhhc-----cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 899 SDSSLPGANMNEAIDHMFD-----ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
. .......... ...+.+ ..++..+.+++.+||+.||++||++.+|++.|+
T Consensus 241 ~--------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 Q--------VIENTGEFFRDQGRQVYLPKP------ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred H--------HHHHHHHHHhhccccccCCCC------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 0011111111 111111 123466889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=307.85 Aligned_cols=247 Identities=27% Similarity=0.411 Sum_probs=191.4
Q ss_pred ceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee-cCceeEEEEEec
Q 037111 695 FCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS-HARHSFLVYEYL 769 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 769 (964)
+.||+|+||.||+|... ++..||+|++... ........+.+|+.+++.++||||+++++++. .++..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 35899999999999753 2357999987532 23334567889999999999999999999775 455689999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC--
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS-- 847 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 847 (964)
.+|+|.+++.... ...++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.......
T Consensus 80 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 80 KHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 9999999997543 2367778889999999999999998 999999999999999999999999999975543211
Q ss_pred --CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCC-CCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 --NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ-HPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 --~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
......+++.|+|||.+.+..++.++||||||+++|||++|+ .||.. ....+..........++.
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~- 223 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----------VDSFDITVYLLQGRRLLQ- 223 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCC-----------CCHHHHHHHHhcCCCCCC-
Confidence 112334567899999998888999999999999999999965 44431 122233333333222211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+..+.+++.+||+.+|++||++.+|++.|+
T Consensus 224 ----~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 224 ----PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred ----CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1123456888999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=313.01 Aligned_cols=249 Identities=25% Similarity=0.426 Sum_probs=202.7
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|+..+.||.|++|.||+|.. .+++.||+|.+.... ......+.+|+..++.++||||+++++++..++..++|+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 96 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK--QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME 96 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc--CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence 4689999999999999999964 578999999986432 2334678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++... .+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 97 YLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred ecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 99999999998543 488999999999999999999999 999999999999999999999999999886655443
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......+++.|+|||.+.+..++.++|||||||++|+|++|+.||..... ......+.....+.. .
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~-----------~~~~~~~~~~~~~~~---~ 236 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----------LRALYLIATNGTPEL---Q 236 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhcCCccc---C
Confidence 33445688899999999988899999999999999999999999853221 111111111111110 0
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||..||++||++.++++
T Consensus 237 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 237 NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 11233456778889999999999999999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=309.21 Aligned_cols=248 Identities=26% Similarity=0.381 Sum_probs=188.6
Q ss_pred eeecCCceeEEEEEeCC---CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 696 CIGRGGYGSVYKAELPS---GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.||+|+||.||+|.... ...+|+|.+... ........+.+|+..++.++||||+++++++......++||||+++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999996543 346888876532 23344567889999999999999999999999999999999999999
Q ss_pred CHHHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC-
Q 037111 773 SLARILSSETA---TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN- 848 (964)
Q Consensus 773 sL~~~l~~~~~---~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~- 848 (964)
+|.+++..... ...++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 99999976432 2346778889999999999999999 9999999999999999999999999998754333211
Q ss_pred -cccccccccccccccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-
Q 037111 849 -WSELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA- 918 (964)
Q Consensus 849 -~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 918 (964)
.....+++.|+|||+... ..++.++|||||||++|||++ |..||.... ..+........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----------~~~~~~~~~~~~ 226 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS-----------DEQVLKQVVREQ 226 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC-----------HHHHHHHHhhcc
Confidence 123345678999998643 456789999999999999999 777864321 11222222111
Q ss_pred --CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 919 --RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 919 --~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+.+.. .......+.+++..|| .||++||++++|++.|.
T Consensus 227 ~~~~~~~~~---~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 227 DIKLPKPQL---DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CccCCCCcc---cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 2222211 1234455667778898 59999999999999885
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=322.11 Aligned_cols=194 Identities=23% Similarity=0.375 Sum_probs=171.6
Q ss_pred cccccceeecCCceeEEEE-EeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-C-----CceeeEEeeeecCcee
Q 037111 690 NFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-H-----RNIVKFYGFCSHARHS 762 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~ 762 (964)
+|++.+.||+|+||.|.+| +.++++.||||+++.. ..-..+...|+.++..++ | -|+|+++++|...++.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 8999999999999999999 5567999999999753 233455667899988886 4 4799999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC--ceEEeccCccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY--EAHVSDFGTAK 840 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg~a~ 840 (964)
|+|+|.+.. +|+++++.+...+++...++.++.||+.||..||+. +|||+||||+|||+...+ .+||+|||.|+
T Consensus 264 ciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 264 CIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccc
Confidence 999999966 999999999888999999999999999999999999 999999999999997654 69999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKD 893 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~ 893 (964)
.....-. ....+..|+|||++.+.+|+.+.||||||||++||++|.+-|.
T Consensus 340 ~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 340 FESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred ccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence 7654432 5567788999999999999999999999999999999976653
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=307.90 Aligned_cols=256 Identities=26% Similarity=0.416 Sum_probs=205.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||.|+||+||+|... ++..||+|++....... ....+.+|+..++.++|+||+++++.+..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 46889999999999999999754 67889999986433222 56788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 768 YLERGSLARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
|+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 9999999999976433 5689999999999999999999999 99999999999999999999999999987665443
Q ss_pred CC----ccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 847 SN----WSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 847 ~~----~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.. .....|+..|+|||.+... .++.++|||||||++|+|++|+.||...... +...+......+
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-----------~~~~~~~~~~~~ 225 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-----------KVLMLTLQNDPP 225 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-----------hhHHHHhcCCCC
Confidence 22 1234688899999998876 7899999999999999999999998643221 112222111111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...........+..+.+++.+||..||++||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 10000111244567889999999999999999999975
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=306.11 Aligned_cols=250 Identities=21% Similarity=0.376 Sum_probs=204.9
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|+||.||++.. .+++.||+|.+............+..|+.++++++||||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 478899999999999999965 4688999999875444445567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccCcccccCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~ 847 (964)
+++++|.+++.......+++..+.+++.++++|++|||++ +++||||+|+||+++.++ .+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 9999999999876556689999999999999999999999 999999999999998654 689999999986654322
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ..............+.
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~---- 221 (256)
T cd08220 158 -AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN-----------LPALVLKIMSGTFAPI---- 221 (256)
T ss_pred -ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc-----------hHHHHHHHHhcCCCCC----
Confidence 223567889999999998889999999999999999999999975321 1222333322222211
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......++.+++.+||+++|++|||+.|++.
T Consensus 222 -~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 222 -SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -CCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1123456888999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=304.80 Aligned_cols=248 Identities=26% Similarity=0.410 Sum_probs=198.7
Q ss_pred ceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCH
Q 037111 695 FCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL 774 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 774 (964)
+.||+|+||.||+|...+++.||+|++...... .....+.+|+.++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 368999999999998777999999988754332 3456889999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcc--cc
Q 037111 775 ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS--EL 852 (964)
Q Consensus 775 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~--~~ 852 (964)
.+++.... ..+++..+..++.+++.|++|||++ +++||||+|+||+++.++.++++|||.+........... ..
T Consensus 80 ~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 80 LTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 99996543 3578899999999999999999999 999999999999999999999999999976542221111 12
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 853 ~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..+..|+|||.+.++.++.++||||||+++|||+| |..||..... ......+ ......+ ....
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-----------~~~~~~~-~~~~~~~----~~~~ 219 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-----------QQTRERI-ESGYRMP----APQL 219 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-----------HHHHHHH-hcCCCCC----CCcc
Confidence 23567999999988889999999999999999999 7888643221 1111111 1111111 1123
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 932 KLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.+..+.+++.+||..+|++||++.|+++.|.+
T Consensus 220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 44568889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=315.12 Aligned_cols=265 Identities=22% Similarity=0.321 Sum_probs=197.9
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|+||.||+|+.+ +|+.||+|+++...........+.+|+.++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999764 688999999865433333345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++ +|.+++.... ..+++..+..++.||++|++|||++ +++||||||+||+++.++.+||+|||.++........
T Consensus 81 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 155 (284)
T cd07839 81 CDQ-DLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC 155 (284)
T ss_pred CCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC
Confidence 974 8888876543 3489999999999999999999999 9999999999999999999999999999866544333
Q ss_pred ccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCC------CCCCChh--HHHHhhhccC
Q 037111 849 WSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS------LPGANMN--EAIDHMFDAR 919 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~ 919 (964)
.....+++.|+|||.+.+.. ++.++|||||||++|||+||+.|+.......... ....... ..........
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07839 156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK 235 (284)
T ss_pred cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccc
Confidence 34456788999999987644 7899999999999999999999864222110000 0000000 0000000000
Q ss_pred CCCCcc-----ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWL-----EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+... .........++.+++.+||+.||++|||++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000 0011123456778999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=306.05 Aligned_cols=251 Identities=24% Similarity=0.422 Sum_probs=202.1
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
.+|+..+.||+|+||.||+|.+.+++.+|+|.+.... .....+.+|++++++++||+++++++++......++||||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA---MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC---CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 4688889999999999999988778899999886432 2245788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 81 MEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred CCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 99999999996543 3478899999999999999999999 9999999999999999999999999998765433211
Q ss_pred -ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 849 -WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 849 -~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.....++.+|+|||.+.++.++.++||||||+++|||++ |+.||.... ..+....+........
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~--- 222 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-----------NSEVVETINAGFRLYK--- 222 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-----------HHHHHHHHhCCCCCCC---
Confidence 112234678999999998889999999999999999998 899875321 1222322221111100
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+..+.+++.+||+.+|++||++.+|++.|.
T Consensus 223 --~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 223 --PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred --CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 0112356888999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=314.38 Aligned_cols=261 Identities=23% Similarity=0.319 Sum_probs=201.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|++.+.||+|+||.||++... ++..||+|.+... ........+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE-IKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 36889999999999999999654 6788899987642 233345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++... ..+++..+..++.|+++|++|||+.. +++||||||+||+++.++.+|++|||.+.......
T Consensus 80 y~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 80 HMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 154 (308)
T ss_pred ccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence 99999999999754 44888999999999999999999732 89999999999999999999999999987553322
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC--------CCCC--------------
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS--------SLPG-------------- 905 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~--------~~~~-------------- 905 (964)
.....+++.|+|||.+.+..++.++||||||+++|+|++|+.||......... ....
T Consensus 155 -~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (308)
T cd06615 155 -ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDS 233 (308)
T ss_pred -cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCc
Confidence 23456889999999998888999999999999999999999998532211000 0000
Q ss_pred ---CChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 906 ---ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 906 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
....+..+.......+ . ........++.+++.+||..+|++||++++|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 234 PRPMAIFELLDYIVNEPPP-K---LPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred cchhhHHHHHHHHhcCCCc-c---CcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000111111111111 0 0011234568899999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=311.39 Aligned_cols=265 Identities=23% Similarity=0.383 Sum_probs=201.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||.||+|+.+ +++.||+|++..........+.+.+|+.++++++|||++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888999999999999999775 68899999986543333334568899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|++++++..+.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99998888877543 3488999999999999999999998 999999999999999999999999999987655443
Q ss_pred Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCC----CCCChhHHHHhhh------
Q 037111 848 NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL----PGANMNEAIDHMF------ 916 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~------ 916 (964)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........... ...... ......
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 234 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIP-RHQQIFSTNQFF 234 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh-HHhhhccccccc
Confidence 3344567889999999876 4578999999999999999999999863322100000 000000 000000
Q ss_pred c-cCCCCCcc----ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 D-ARLPPPWL----EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~-~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ...+.+.. ..........+.+++.+||+++|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0 00111000 0001123456889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=314.41 Aligned_cols=262 Identities=25% Similarity=0.405 Sum_probs=203.2
Q ss_pred ccHHHHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeee
Q 037111 679 LVYEEIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFC 756 (964)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 756 (964)
..++.+..+.++|++.+.||+|+||.||+|..+ +++.||+|.+.... .....+.+|+.+++++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 344556667889999999999999999999654 67899999875321 2235677899999998 699999999987
Q ss_pred e-----cCceeEEEEEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 757 S-----HARHSFLVYEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 757 ~-----~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
. .++..++||||+++|+|.+++... ....+++..+..++.|+++|+.|||+. +++||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 3 345789999999999999988642 234578899999999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCCCCCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC
Q 037111 830 EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~ 904 (964)
.++++|||++..............|++.|+|||++. +..++.++||||+||++|||++|+.||......
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~------ 235 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM------ 235 (286)
T ss_pred CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh------
Confidence 999999999987654433334456899999999875 345788999999999999999999998533211
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
.......... ++.. .........+.+++.+||+.||++||++.|+++.
T Consensus 236 -----~~~~~~~~~~-~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 236 -----RALFKIPRNP-PPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred -----HHHhhccccC-CCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 1111111111 1110 0111223458889999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=306.52 Aligned_cols=240 Identities=23% Similarity=0.381 Sum_probs=187.0
Q ss_pred ceeecCCceeEEEEEeCC-------------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 695 FCIGRGGYGSVYKAELPS-------------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
+.||+|+||.||+|...+ ...||+|.+... .......+.+|+.+++.++||||+++++++..+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS--HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh--hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 358999999999997532 225888886542 23344578889999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc-------eEEe
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE-------AHVS 834 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~-------~kl~ 834 (964)
.++||||+++|+|..++.... ..+++..+.+++.||++|++|||+. +|+||||||+||+++.++. ++++
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred CEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 999999999999999986543 3488999999999999999999999 9999999999999987664 8999
Q ss_pred ccCcccccCCCCCCccccccccccccccccc-cCCCCcchhHHHHHHHHHHHH-hCCCCCCccccccCCCCCCCChhHHH
Q 037111 835 DFGTAKLLKPDSSNWSELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 835 Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~sDvwSlGvll~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|+.||..... .+ .
T Consensus 155 d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----------~~-~ 218 (262)
T cd05077 155 DPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-----------AE-K 218 (262)
T ss_pred CCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-----------hH-H
Confidence 99998755322 2345778899999886 466899999999999999998 57777642111 01 1
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
........... .....++.+++.+||+.||++||++.++++.+.
T Consensus 219 ~~~~~~~~~~~------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 219 ERFYEGQCMLV------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHHhcCccCC------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 11111111110 112346788999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=322.84 Aligned_cols=199 Identities=24% Similarity=0.355 Sum_probs=170.5
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------ 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 759 (964)
..++|+..+.||+|+||.||+|... .++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999654 688999999875444444556788999999999999999999987543
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
...|+||||+++ +|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 357999999975 78777742 377889999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
+...... ......+++.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 174 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 174 RTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred cccCCCC-cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 7654332 22345689999999999999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=318.45 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=194.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||+||+++.+ +++.||+|++.... ........+.+|+.++..++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46889999999999999999764 68899999986422 22233456888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999653 23488899999999999999999999 99999999999999999999999999987655433
Q ss_pred CC-cccccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC-
Q 037111 847 SN-WSELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR- 919 (964)
Q Consensus 847 ~~-~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 919 (964)
.. .....|++.|+|||++.. ..++.++||||+||++|||++|+.||.... ..+....+....
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~-----------~~~~~~~i~~~~~ 225 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES-----------LVETYGKIMNHKE 225 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC-----------HHHHHHHHHcCCC
Confidence 22 223468999999999863 457889999999999999999999985321 122222222211
Q ss_pred -CCCCccccchHHHHHHHHHHHHHccCCCC--CCCCCHHHHHH
Q 037111 920 -LPPPWLEVGVEDKLKSIIEVALSCVDANP--ERRPNMQIVCK 959 (964)
Q Consensus 920 -~~~~~~~~~~~~~~~~l~~li~~cl~~dp--~~RPs~~evl~ 959 (964)
.+.+. ........+.+++.+|+..++ ..||+++++++
T Consensus 226 ~~~~~~---~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 226 HFQFPP---DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred cccCCC---ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 11110 011233456667777765433 34788888875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=326.10 Aligned_cols=247 Identities=23% Similarity=0.351 Sum_probs=194.2
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||+|+.+ +++.||+|++.... ........+.+|+.++..++||+|+++++++.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999664 68899999986432 12333467888999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999999654 3488899999999999999999999 99999999999999999999999999987543211
Q ss_pred C-----------------------------------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 037111 847 S-----------------------------------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891 (964)
Q Consensus 847 ~-----------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p 891 (964)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0 01134689999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCChhHHHHhhhccC----CCCCccccchHHHHHHHHHHHHHccCCCCCCCCC---HHHHH
Q 037111 892 KDLLSSLSDSSLPGANMNEAIDHMFDAR----LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN---MQIVC 958 (964)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs---~~evl 958 (964)
|.... ..+....+.... +++. .....++.+++.+|+ .||++|++ +++++
T Consensus 236 f~~~~-----------~~~~~~~i~~~~~~~~~p~~------~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 291 (360)
T cd05627 236 FCSET-----------PQETYRKVMNWKETLVFPPE------VPISEKAKDLILRFC-TDSENRIGSNGVEEIK 291 (360)
T ss_pred CCCCC-----------HHHHHHHHHcCCCceecCCC------CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHh
Confidence 85322 122333332211 1211 012234556666766 59999996 45544
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=322.40 Aligned_cols=264 Identities=20% Similarity=0.298 Sum_probs=198.2
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------ 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 759 (964)
..++|+..+.||+|+||.||++... .++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999654 688999999875444445556788999999999999999999988643
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
...++||||+++ ++.+++.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCccc
Confidence 357999999976 77777642 378889999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------CCCCCC----h
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------SLPGAN----M 908 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------~~~~~~----~ 908 (964)
+...... ......|++.|+|||.+.+..++.++|||||||++|||++|+.||......... ..+... .
T Consensus 167 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 167 RTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred ccCCCcc-ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 7654332 223457899999999999999999999999999999999999998643211000 000000 0
Q ss_pred hHHHHhhhccCC-------CC-------CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 909 NEAIDHMFDARL-------PP-------PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 909 ~~~~~~~~~~~~-------~~-------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
............ +. +............+.+++.+|+..||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 000000000000 00 0000011112346788999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=310.59 Aligned_cols=252 Identities=23% Similarity=0.375 Sum_probs=203.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|... ++..||+|.+... .......+.+|+.++++++||||+++++++..+...++||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 356889999999999999999764 6889999998632 3344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++++|.+++.... ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++++|||.+.......
T Consensus 82 e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 82 EFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 9999999999986543 3588999999999999999999999 99999999999999999999999999987655443
Q ss_pred CCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 847 SNWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.......+++.|+|||.+. +..++.++||||||+++|||++|+.||..... .+....+.....+
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~ 226 (280)
T cd06611 158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----------MRVLLKILKSEPP 226 (280)
T ss_pred cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-----------HHHHHHHhcCCCC
Confidence 3334556889999999875 34577899999999999999999999753221 1222333222111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. .........+.+++.+||+.+|++||++.+|++
T Consensus 227 ~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 227 TL---DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred Cc---CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 10 011223456788899999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=320.05 Aligned_cols=255 Identities=24% Similarity=0.406 Sum_probs=197.8
Q ss_pred hhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC-
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA- 759 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 759 (964)
.++|++.+.||+|+||.||+|.. .+++.||||+++... .......+.+|+.++.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 35799999999999999999963 357789999986432 233346788999999999 689999999988654
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC---------------------------------------------------------
Q 037111 760 RHSFLVYEYLERGSLARILSSET--------------------------------------------------------- 782 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~--------------------------------------------------------- 782 (964)
...++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 46789999999999999986421
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC--cccc
Q 037111 783 --------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSEL 852 (964)
Q Consensus 783 --------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~ 852 (964)
...+++..+..++.||++|++|||++ +|+||||||+||+++.++.+|++|||++......... ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 12367888899999999999999999 9999999999999999999999999999765433221 1223
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC-CCCCccccchH
Q 037111 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR-LPPPWLEVGVE 930 (964)
Q Consensus 853 ~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 930 (964)
.+++.|+|||.+.+..++.++||||||+++|||++ |..||..... .......+.... .+.+.
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~~------ 305 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----------DEEFCRRLKEGTRMRAPD------ 305 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc----------cHHHHHHHhccCCCCCCC------
Confidence 45678999999988889999999999999999997 8888753211 011111111111 11110
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 931 DKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 931 ~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....++.+++.+||+.+|++||++.+|++.|+
T Consensus 306 ~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~ 337 (343)
T cd05103 306 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 337 (343)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 12245788999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=313.05 Aligned_cols=247 Identities=26% Similarity=0.433 Sum_probs=200.4
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
.|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+|+.++++++||||+++++++..+...++||||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 4667788999999999999654 578899998764322 33456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++++|.+++.. ..+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++++|||++.........
T Consensus 84 ~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06642 84 LGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred cCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcchh
Confidence 999999999854 3478899999999999999999998 9999999999999999999999999999766544333
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....++..|+|||++.+..++.++||||||+++|||++|+.|+...... .....+ ....++. .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----------~~~~~~-~~~~~~~----~ 221 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM-----------RVLFLI-PKNSPPT----L 221 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh-----------hHHhhh-hcCCCCC----C
Confidence 33456788999999999988999999999999999999999997532210 111111 1111111 1
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||+.+|++||++.+|++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 222 EGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1234456888999999999999999999986
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=323.48 Aligned_cols=242 Identities=23% Similarity=0.277 Sum_probs=188.5
Q ss_pred eecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCC---CCCceeeEEeeeecCceeEEEEEeccC
Q 037111 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGV---RHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 697 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
||+|+||+||+|+.+ +++.||||++..... .......+..|..++... +||+|+++++++.+....|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999764 689999999864221 122234455666666554 699999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.+++... ..+++..+..++.||++|++|||++ +|+||||||+||+++.++.+||+|||++............
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~ 155 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNT 155 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccC
Confidence 9999998654 3488999999999999999999999 9999999999999999999999999999765443333445
Q ss_pred cccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchH
Q 037111 852 LAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE 930 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (964)
..||+.|+|||.+.+. .++.++||||+||++|||++|+.||... ...+....+.......+. .
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~-----------~~~~~~~~i~~~~~~~~~-----~ 219 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-----------DTQQMYRNIAFGKVRFPK-----N 219 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC-----------CHHHHHHHHHcCCCCCCC-----c
Confidence 6799999999998754 4889999999999999999999998532 122333333333222211 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC----HHHHHH
Q 037111 931 DKLKSIIEVALSCVDANPERRPN----MQIVCK 959 (964)
Q Consensus 931 ~~~~~l~~li~~cl~~dp~~RPs----~~evl~ 959 (964)
.....+.+++.+||++||++||+ +.++++
T Consensus 220 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 220 VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 12345678888999999999994 555543
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=305.32 Aligned_cols=251 Identities=24% Similarity=0.383 Sum_probs=205.2
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--CceeEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH--ARHSFLVY 766 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 766 (964)
+|+..+.||.|+||.||+|.. .+++.||+|.+..........+.+..|+.++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478889999999999999964 468899999987544445556778899999999999999999998754 45689999
Q ss_pred EeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHh-----hCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 767 EYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMH-----HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 767 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
||+++++|.+++... ....+++..++.++.|++.|++||| +. +++||||+|+||+++.++.+|++|||.+
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999653 2456889999999999999999999 66 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..............+++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+..+.+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~ 226 (265)
T cd08217 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-----------QLQLASKIKEGK 226 (265)
T ss_pred ccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-----------HHHHHHHHhcCC
Confidence 877654433445578999999999998889999999999999999999999986322 122223332222
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+. ........+.+++.+|+..+|++||++.+|++
T Consensus 227 ~~~-----~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 227 FRR-----IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred CCC-----CccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 221 11234466888999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=308.74 Aligned_cols=239 Identities=23% Similarity=0.387 Sum_probs=185.2
Q ss_pred eeecCCceeEEEEEeCC-------------------------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCcee
Q 037111 696 CIGRGGYGSVYKAELPS-------------------------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 750 (964)
.||+|+||.||+|.... ...||+|.+... ......++.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHHHHHHHHHHHHHHhcCCCCCee
Confidence 59999999999996421 135888887532 223345788899999999999999
Q ss_pred eEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-
Q 037111 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY- 829 (964)
Q Consensus 751 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~- 829 (964)
++++++.+....++||||+++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||+++..+
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGL 155 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCc
Confidence 99999999999999999999999999986533 3588899999999999999999998 999999999999997654
Q ss_pred ------ceEEeccCcccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHH-hCCCCCCccccccCC
Q 037111 830 ------EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDS 901 (964)
Q Consensus 830 ------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~-tg~~p~~~~~~~~~~ 901 (964)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||.....
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---- 227 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP---- 227 (274)
T ss_pred ccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh----
Confidence 3899999988644322 12356788999998865 56899999999999999995 68888753221
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+. ..........+ .....++.+++.+||+.+|++||++++|++.|+
T Consensus 228 -------~~~-~~~~~~~~~~~------~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 228 -------SEK-ERFYEKKHRLP------EPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred -------HHH-HHHHHhccCCC------CCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 111 11111111111 011235788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=306.07 Aligned_cols=254 Identities=25% Similarity=0.350 Sum_probs=197.4
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+++.+.....||+|+||.||+|... ++..||+|.+... .....+.+.+|+.++++++|+||+++++++..++..++|
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER--DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC--CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 4556666778999999999999754 6778999987643 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceEEeccCcccccC
Q 037111 766 YEYLERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAHVSDFGTAKLLK 843 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~ 843 (964)
+||+++++|.+++.... ....++..+..++.||+.|++|||+. +|+||||||+||+++. ++.++|+|||.+....
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 99999999999997542 21237788889999999999999998 9999999999999987 6799999999987654
Q ss_pred CCCCCccccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
..........+++.|+|||++.+.. ++.++||||||+++|+|++|+.||....... ........... .
T Consensus 161 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~-~ 230 (268)
T cd06624 161 GINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ---------AAMFKVGMFKI-H 230 (268)
T ss_pred cCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh---------hhHhhhhhhcc-C
Confidence 4333333446789999999986543 7889999999999999999999975322100 00000000011 1
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+. .......++.+++.+||+.+|++||++.++++
T Consensus 231 ~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 231 PE----IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CC----CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 11 11223455778889999999999999999875
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=309.94 Aligned_cols=252 Identities=23% Similarity=0.401 Sum_probs=204.5
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 767 (964)
..|++.++||+||.+.||++...+.+.||+|++.....+.....-|..|+..+.+++ |.+|+++++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 468899999999999999999888899999998877777777888999999999995 9999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|=+. +|..++.........| .++.++.|++.|+.++|.+ ||||.||||.|+++- .|.+||+|||.|..+..+..
T Consensus 441 ~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 441 CGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred cccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccCcccc
Confidence 8754 9999998766654545 7788999999999999999 999999999999995 68999999999998877654
Q ss_pred C--ccccccccccccccccccCC-----------CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 848 N--WSELAGTYGYVAPELAYTMK-----------VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 848 ~--~~~~~g~~~y~aPE~~~~~~-----------~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
. ....+||+.||+||.+.... .+.++||||+|||+|+|+.|+.||..... ....+..
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n----------~~aKl~a 584 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN----------QIAKLHA 584 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH----------HHHHHHh
Confidence 3 34568999999999987443 45789999999999999999999863221 1122333
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+.++.-..+..... ...++++++..|+..||.+||++.++++
T Consensus 585 I~~P~~~Iefp~~~---~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 585 ITDPNHEIEFPDIP---ENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred hcCCCccccccCCC---CchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 33331111110000 1122889999999999999999999975
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=306.69 Aligned_cols=251 Identities=21% Similarity=0.367 Sum_probs=205.5
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|+||.||+|..+ +|..||+|.+............+.+|+.++++++|+||+++++++......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999765 578899999865433334456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccCcccccCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~ 847 (964)
+++++|.+++.......+++..+..++.|+++|++|||+. +++|+||+|+||++++++ .+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 9999999999776655689999999999999999999999 999999999999999886 469999999987654433
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......|++.|+|||...+..++.++||||||+++|||++|+.||... ...+..........++.
T Consensus 158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~---- 222 (257)
T cd08225 158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-----------NLHQLVLKICQGYFAPI---- 222 (257)
T ss_pred cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----------cHHHHHHHHhcccCCCC----
Confidence 334456889999999998888999999999999999999999997521 12223333333322211
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||..+|++||++.++++
T Consensus 223 -~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 -SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1123346888899999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=312.17 Aligned_cols=266 Identities=25% Similarity=0.402 Sum_probs=205.6
Q ss_pred hcccccceeecCCceeEEEEEeC-----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--Cce
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH--ARH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~ 761 (964)
..|+..+.||+|+||.||+|++. ++..||||.+...... .....+.+|+..++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 35777889999999999999753 4678999998754332 346789999999999999999999999887 557
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+..
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCcc-ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 8999999999999999976443 489999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC---CCCCCChhHHHHhh
Q 037111 842 LKPDSSNW---SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS---SLPGANMNEAIDHM 915 (964)
Q Consensus 842 ~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~ 915 (964)
........ ....++..|+|||...+..++.++||||||+++|||++|+.|+......... ............+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence 65332211 1223456799999998889999999999999999999999997543221100 00000111222222
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.......+ ....++.++.+++.+||+.+|++||++.||+++|+.
T Consensus 239 ~~~~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 239 LKEGERLP----RPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred HHcCCcCC----CCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 22211111 112344678899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=306.51 Aligned_cols=246 Identities=23% Similarity=0.419 Sum_probs=192.3
Q ss_pred eeecCCceeEEEEEeCC-CC--eEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEEeccC
Q 037111 696 CIGRGGYGSVYKAELPS-GD--TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
.||+|+||.||+|..++ +. .+|+|.++.. ........+.+|+.++.++ +||||+++++++......++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 58999999999997753 43 4688887632 2333446788999999999 799999999999999999999999999
Q ss_pred CCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccC
Q 037111 772 GSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 772 gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
|+|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 99999996532 12478899999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
++....... .......+..|+|||++....++.++|||||||++|||++ |+.||.... ..+....+.
T Consensus 158 l~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-----------~~~~~~~~~ 225 (270)
T cd05047 158 LSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----------CAELYEKLP 225 (270)
T ss_pred Cccccchhh-hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC-----------HHHHHHHHh
Confidence 985322111 1111223567999999988889999999999999999997 999975321 122222221
Q ss_pred ccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 917 DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.. ...+ .......++.+++.+||+.+|.+||++.+++..|+
T Consensus 226 ~~-~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 266 (270)
T cd05047 226 QG-YRLE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 266 (270)
T ss_pred CC-CCCC----CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 11 1111 01123456889999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=329.30 Aligned_cols=261 Identities=22% Similarity=0.280 Sum_probs=189.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-------
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------- 759 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 759 (964)
..+|+..+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 357999999999999999999764 68899999885321 2334799999999999999999886432
Q ss_pred -ceeEEEEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEec
Q 037111 760 -RHSFLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSD 835 (964)
Q Consensus 760 -~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~D 835 (964)
...++||||+++ ++.+++.. .....+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 246799999985 78777753 2345688999999999999999999999 999999999999999765 699999
Q ss_pred cCcccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhH
Q 037111 836 FGTAKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNE 910 (964)
Q Consensus 836 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~ 910 (964)
||+|+....... .....|++.|+|||++.+. .++.++||||+||++|||++|+.||.......... .-+....+
T Consensus 215 FGla~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~ 293 (440)
T PTZ00036 215 FGSAKNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED 293 (440)
T ss_pred cccchhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 999986653322 2345689999999998764 68999999999999999999999986322110000 00000000
Q ss_pred HHHhh----hccCCCC----CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 911 AIDHM----FDARLPP----PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 911 ~~~~~----~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+ ....++. ..........+.++.+++.+||..||++|||+.|+++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00000 0000110 0000001123356889999999999999999999874
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=313.42 Aligned_cols=252 Identities=22% Similarity=0.294 Sum_probs=204.6
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc-hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE-TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
+|+..+.||+|+||.||+|... +++.||+|.+...... ....+.+..|++.++.++||||+++++.+.+.+..++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 6888999999999999999765 5899999998754322 2345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+.+++|.+++.......+++..+..++.|+++|++|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 99999999999766556789999999999999999999999 999999999999999999999999999865432211
Q ss_pred -----------------------------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 037111 848 -----------------------------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSL 898 (964)
Q Consensus 848 -----------------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~ 898 (964)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~-- 236 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN-- 236 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc--
Confidence 1112357889999999998889999999999999999999999975322
Q ss_pred cCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCC----HHHHHH
Q 037111 899 SDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN----MQIVCK 959 (964)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs----~~evl~ 959 (964)
..+....+.......+. .......+.+++.+||..||++||+ ++++++
T Consensus 237 ---------~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 ---------RDETFSNILKKEVTFPG----SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred ---------hHHHHHHHhcCCccCCC----ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 12333333332222111 1124567889999999999999999 776664
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=309.65 Aligned_cols=258 Identities=24% Similarity=0.403 Sum_probs=203.1
Q ss_pred HHHHHHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 681 YEEIIRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 681 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
..+.....+.|+..+.||+|+||.||+|.. .+++.||+|.+... .....++..|+.+++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 344445667899999999999999999976 46889999987542 23345678899999888 69999999999853
Q ss_pred ------CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceE
Q 037111 759 ------ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH 832 (964)
Q Consensus 759 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~k 832 (964)
....++||||+++|+|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 45789999999999999999876656688888999999999999999999 999999999999999999999
Q ss_pred EeccCcccccCCCCCCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCC
Q 037111 833 VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGAN 907 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~ 907 (964)
|+|||.+..............|++.|+|||.+. +..++.++|||||||++|||++|+.||......
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~--------- 232 (282)
T cd06636 162 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM--------- 232 (282)
T ss_pred EeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH---------
Confidence 999999876543333334456889999999876 345788999999999999999999998532211
Q ss_pred hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+....+. ...++. ......+..+.+++.+||+.||++||++.|+++
T Consensus 233 --~~~~~~~-~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 233 --RALFLIP-RNPPPK---LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred --hhhhhHh-hCCCCC---CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 1111111 111111 111234556889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=306.86 Aligned_cols=249 Identities=21% Similarity=0.333 Sum_probs=198.0
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|++.+.||+|+||.||+|... ++..|++|.+... .......+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 677788999999999999765 4677888887532 2334567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 849 (964)
++|+|.+++... ..++++..+..++.|+++||+|||+. +++||||||+||+++.++.+|++|||++..........
T Consensus 85 ~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~ 160 (282)
T cd06643 85 AGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 160 (282)
T ss_pred CCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccccc
Confidence 999999988643 24589999999999999999999999 99999999999999999999999999987654433333
Q ss_pred cccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 850 SELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 850 ~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
....+++.|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+.....+...
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~~ 229 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN-----------PMRVLLKIAKSEPPTLA 229 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC-----------HHHHHHHHhhcCCCCCC
Confidence 4456889999999974 4557889999999999999999999975322 11222222222111110
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......++.+++.+||+.+|++||++.++++
T Consensus 230 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 230 ---QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11223456788899999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=304.90 Aligned_cols=249 Identities=27% Similarity=0.431 Sum_probs=199.4
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCch-------hhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGET-------THQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
+|.+...||+|++|.||+|.. .+++.||+|.+....... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 467788999999999999965 468899999886432211 123568889999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999999654 3478889999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCC------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 842 LKPDSS------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 842 ~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
...... ......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||..... ...+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~ 224 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ-----------LQAIFKI 224 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH-----------HHHHHHH
Confidence 653211 11223578899999999988899999999999999999999999863211 1222222
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+. ........+.+++.+||++||++||++.+|++
T Consensus 225 ~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 225 GENASPE-----IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred hccCCCc-----CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1111111 11234456788889999999999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=305.69 Aligned_cols=247 Identities=26% Similarity=0.422 Sum_probs=202.7
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
.|+..+.||+|+||.||+|..+ +++.||+|.+.... .......+.+|+.++++++||||+++++++.++...++||||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 5777888999999999999764 58899999886432 233456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.. .++++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+.........
T Consensus 84 ~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06640 84 LGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCccc
Confidence 999999999864 3478889999999999999999998 9999999999999999999999999999766544333
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ......+ ....++ ..
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-----------~~~~~~~-~~~~~~----~~ 221 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP-----------MRVLFLI-PKNNPP----TL 221 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcCh-----------HhHhhhh-hcCCCC----CC
Confidence 3345678899999999988899999999999999999999999753221 1111111 111111 12
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+..+.+++.+||+.+|++||++.++++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 222 TGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred chhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 3356677889999999999999999999975
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=312.64 Aligned_cols=266 Identities=21% Similarity=0.313 Sum_probs=196.5
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|++|.||+|..+ +++.||+|.+..... ......+.+|+.++++++||||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE-EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc-cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 367999999999999999999765 688999999864322 222345678999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++ +|.+++..... .+++..+..++.|+++||.|||+. +++||||||+||+++.++.+|++|||.++......
T Consensus 83 e~~~~-~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 83 EYLDT-DLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred ecCCC-CHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 99985 99999875443 588999999999999999999999 99999999999999999999999999987543322
Q ss_pred CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-----CCCCCChhHHHHhh-----
Q 037111 847 SNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-----SLPGANMNEAIDHM----- 915 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~----- 915 (964)
.......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......... ........+.....
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 22223356788999998875 45889999999999999999999998543210000 00000000000000
Q ss_pred -hccCC---CCCccccchHHH--HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 -FDARL---PPPWLEVGVEDK--LKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 -~~~~~---~~~~~~~~~~~~--~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..... .+.......... ..++.+++.+|++++|++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000 000000000011 145678999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=310.35 Aligned_cols=266 Identities=22% Similarity=0.340 Sum_probs=200.1
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||.|++|.||+|+.+ +++.||||++............+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999764 688999999865433333446788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+. ++|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||.+.........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence 96 5899999776666789999999999999999999999 9999999999999999999999999998766544333
Q ss_pred ccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------CCCCCChhHHHHhh--hcc
Q 037111 849 WSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------SLPGANMNEAIDHM--FDA 918 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------~~~~~~~~~~~~~~--~~~ 918 (964)
.....+++.|+|||.+.+.. ++.++||||||+++|||+||+.||......... ..+........... ...
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07860 157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP 236 (284)
T ss_pred cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHh
Confidence 33445688999999887644 588999999999999999999998532211000 00000000000000 000
Q ss_pred CCC---CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 RLP---PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 ~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+ .............++.+++.+||+.||++||+++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 237 SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000 00000001122345678999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=318.39 Aligned_cols=255 Identities=22% Similarity=0.307 Sum_probs=197.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||+||+++.+ +++.||+|.+.... ........+.+|+.++..++|++|+++++++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999765 67889999986422 22233456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++||+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999997533 3488899999999999999999999 99999999999999999999999999997665433
Q ss_pred CC-cccccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 847 SN-WSELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 847 ~~-~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.. .....|++.|+|||++.+ +.++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-----------~~~~~~~i~~~~~ 225 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES-----------LVETYGKIMNHEE 225 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC-----------HHHHHHHHHcCCC
Confidence 22 223568999999999875 467889999999999999999999985321 1233333332211
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPER--RPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPs~~evl~ 959 (964)
..+. .....+...++.+++.+|+..++++ |++++++++
T Consensus 226 ~~~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 226 RFQF-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cccC-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 1110 0111223456777888888765544 457777764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-34 Score=306.72 Aligned_cols=256 Identities=26% Similarity=0.435 Sum_probs=204.0
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+|+..+.||+|+||.||+|+.+ +.+.||+|.+.... .......+.+|++++++++||||+++++++.+....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 46888999999999999999754 34578999875422 222456789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCC-------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEec
Q 037111 763 FLVYEYLERGSLARILSSETA-------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSD 835 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~D 835 (964)
++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcc
Confidence 999999999999999976441 2589999999999999999999999 999999999999999999999999
Q ss_pred cCcccccCCCC-CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHH
Q 037111 836 FGTAKLLKPDS-SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 836 fg~a~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
||++....... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||.... ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~-----------~~~~~~ 229 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS-----------DEEVLN 229 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----------hHHHHH
Confidence 99986543222 22233456778999999988889999999999999999998 777874221 122233
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.........+ .....+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 230 ~~~~~~~~~~----~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 230 RLQAGKLELP----VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred HHHcCCcCCC----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 3322222211 112344568889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=305.55 Aligned_cols=248 Identities=27% Similarity=0.401 Sum_probs=185.7
Q ss_pred eeecCCceeEEEEEeCCCC---eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 696 CIGRGGYGSVYKAELPSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.||+|+||.||+|+..++. .+++|.+.... .......+.+|+..++.++||||+++++++.+....++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 5899999999999654433 45666654322 2334578999999999999999999999999999999999999999
Q ss_pred CHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC--CC
Q 037111 773 SLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS--SN 848 (964)
Q Consensus 773 sL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~--~~ 848 (964)
+|.+++.... ....++..+..++.||++||+|||+. +++||||||+||+++.++.++++|||++....... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 9999997542 23456777889999999999999998 99999999999999999999999999986432221 11
Q ss_pred cccccccccccccccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC-
Q 037111 849 WSELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR- 919 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 919 (964)
.....++..|+|||++.. ..++.++||||||+++|||++ |..||.... ..+....+....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----------~~~~~~~~~~~~~ 226 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS-----------DREVLNHVIKDQQ 226 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHhhcc
Confidence 224467889999998753 345789999999999999997 466764221 122222222111
Q ss_pred --CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 --LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 --~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.+... ......+.+++..|| .+|++||++++|++.|.
T Consensus 227 ~~~~~~~~~---~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 227 VKLFKPQLE---LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cccCCCccC---CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1111111 123345677888999 67999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=303.20 Aligned_cols=249 Identities=23% Similarity=0.377 Sum_probs=200.0
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccC----chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTG----ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+|+..+.||+|+||.||+|...+++.||+|.+..... .......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4788899999999999999888899999998864321 122335688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 99999999999996543 478899999999999999999999 9999999999999999999999999998754321
Q ss_pred C------CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc-
Q 037111 846 S------SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA- 918 (964)
Q Consensus 846 ~------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 918 (964)
. .......++..|+|||.+.+..++.++||||+|+++|+|++|+.||..... ......+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----------~~~~~~~~~~~ 224 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-----------LAAMFYIGAHR 224 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh-----------HHHHHHhhhcc
Confidence 1 112234678899999999988899999999999999999999999853221 1111111111
Q ss_pred -CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 -RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 -~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+. ........+.+++.+||+++|++||++.++++
T Consensus 225 ~~~~~-----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 225 GLMPR-----LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCC-----CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111 11123455788889999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=306.94 Aligned_cols=254 Identities=24% Similarity=0.357 Sum_probs=205.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||.||+|..+ +++.||+|++..... .....++.+|++++++++||||+++++++..++..++|+|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 35788889999999999999765 688999999875432 3455778899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
|+++++|.+++.... ..+++..+.+++.|++.|++|||+ . +++||||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 80 YMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred ecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 999999999997643 458889999999999999999999 7 99999999999999999999999999987654332
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.. ...++..|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+..........+..
T Consensus 156 ~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~--- 224 (265)
T cd06605 156 AK--TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP------PDGIFELLQYIVNEPPPRL--- 224 (265)
T ss_pred hh--cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc------cccHHHHHHHHhcCCCCCC---
Confidence 21 256788999999999999999999999999999999999998643220 1111223333332222111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||..+|++||++.++++
T Consensus 225 -~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 225 -PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 01114556888999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=317.39 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=195.9
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||+||+++.+ +++.||+|++.+.. ........+..|+.++..++|++|+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36889999999999999999765 57789999986422 12223345788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999997533 3488899999999999999999999 99999999999999999999999999987654332
Q ss_pred C-Cccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 847 S-NWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 847 ~-~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
. ......||+.|+|||++. ...++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-----------~~~~~~~i~~~~~ 225 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES-----------LVETYGKIMNHKE 225 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-----------HHHHHHHHhCCCc
Confidence 2 223357899999999986 3458899999999999999999999985321 2233333332211
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPER--RPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPs~~evl~ 959 (964)
..+. ..........+.+++.+|+..++++ |++++++++
T Consensus 226 ~~~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 226 RFQF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred cccC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 1100 0111223455677777877554444 788888864
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=315.52 Aligned_cols=254 Identities=23% Similarity=0.386 Sum_probs=201.3
Q ss_pred hcccccceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA 759 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (964)
.+|++.+.||+|+||.||+|+.. ++..||+|.+... ......+++.+|+.+++++ +||||+++++++..+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 46889999999999999999642 1236899987642 2334457889999999999 799999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE
Q 037111 760 RHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL 825 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill 825 (964)
+..++||||+++|+|.+++.... ...+++..+..++.|++.|++|||++ +++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEE
Confidence 99999999999999999997532 23478889999999999999999999 99999999999999
Q ss_pred CCCCceEEeccCcccccCCCCCCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCC
Q 037111 826 DFEYEAHVSDFGTAKLLKPDSSNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSS 902 (964)
Q Consensus 826 ~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~ 902 (964)
+.++.+||+|||.++......... ....++..|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~-------- 239 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG-------- 239 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC--------
Confidence 999999999999997654332211 12234567999999999999999999999999999998 7888642
Q ss_pred CCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 903 LPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+....+....... ........+.+++.+||+.+|++||++.++++.|+
T Consensus 240 ---~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~ 291 (334)
T cd05100 240 ---IPVEELFKLLKEGHRMD-----KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLD 291 (334)
T ss_pred ---CCHHHHHHHHHcCCCCC-----CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 22223333322221111 11233456889999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=303.31 Aligned_cols=252 Identities=25% Similarity=0.440 Sum_probs=209.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|++|.||+|+.+ +++.||+|++...... .....+.+|+..+.+++|||++++++++......++|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 36888999999999999999766 5899999998754322 446789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
|+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.+.......
T Consensus 80 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 80 YMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred ecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 99999999999654 458899999999999999999999 8 99999999999999999999999999998766544
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.......++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ....+....+.....+..
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--------~~~~~~~~~~~~~~~~~~--- 223 (264)
T cd06623 155 DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--------PSFFELMQAICDGPPPSL--- 223 (264)
T ss_pred CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--------cCHHHHHHHHhcCCCCCC---
Confidence 443455688899999999988899999999999999999999999864332 112233333332222211
Q ss_pred cchHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVED-KLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~-~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
... .+..+.+++.+||+++|++||++.++++
T Consensus 224 --~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 224 --PAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred --CcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 112 4567889999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=306.19 Aligned_cols=251 Identities=26% Similarity=0.431 Sum_probs=200.7
Q ss_pred hcccccceeecCCceeEEEEEeC-CCC----eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.+|+..+.||+|+||.||+|..+ +|+ .||+|.+..... .....++.+|+..+++++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 56888999999999999999754 333 589998764332 3445678899999999999999999999987 7889
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++...
T Consensus 85 ~v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHKD-NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEEecCCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 99999999999999976433 388999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCCcc--ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC-
Q 037111 844 PDSSNWS--ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR- 919 (964)
Q Consensus 844 ~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 919 (964)
....... ...++..|+|||.+....++.++||||||+++||+++ |+.||+... ..+....+....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----------~~~~~~~~~~~~~ 229 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-----------AVEIPDLLEKGER 229 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-----------HHHHHHHHhCCCC
Confidence 4332221 2223568999999988889999999999999999998 999975321 122222222221
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.+ ..+..++.+++.+||..+|++||++.++++.|+
T Consensus 230 ~~~~------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~ 266 (279)
T cd05057 230 LPQP------PICTIDVYMVLVKCWMIDAESRPTFKELINEFS 266 (279)
T ss_pred CCCC------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1111 123345778899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=301.47 Aligned_cols=251 Identities=29% Similarity=0.465 Sum_probs=202.7
Q ss_pred ccccceeecCCceeEEEEEeCC-----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 691 FDESFCIGRGGYGSVYKAELPS-----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+++.+.||+|+||.||+++..+ +..||+|++.... .......+..|+..++.++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 3567889999999999997653 3789999986432 222457889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+......
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 9999999999999765444489999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCcc-ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 846 SSNWS-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 846 ~~~~~-~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..... ...+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.. ................+.
T Consensus 157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~ 225 (258)
T smart00219 157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG-----------MSNEEVLEYLKKGYRLPK 225 (258)
T ss_pred cccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHhcCCCCCC
Confidence 22211 2336789999999988889999999999999999998 7777653 122233333332222211
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
....+.++.+++.+|++.+|++|||+.++++.|
T Consensus 226 -----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 -----PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 112456688899999999999999999999875
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=303.94 Aligned_cols=254 Identities=25% Similarity=0.436 Sum_probs=203.0
Q ss_pred cccccceeecCCceeEEEEEeCC--CCeEEEEEecccc--------CchhhHHHHHHHHHHHhC-CCCCceeeEEeeeec
Q 037111 690 NFDESFCIGRGGYGSVYKAELPS--GDTVAVKKLHSFT--------GETTHQKEFLSEIKALTG-VRHRNIVKFYGFCSH 758 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~--------~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 758 (964)
.|+..+.||+|+||.||+|..+. ++.||+|.+.... .......++..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999998764 6789999875321 122334567788888764 799999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEec
Q 037111 759 ARHSFLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSD 835 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~D 835 (964)
++..++||||+++++|.+++.. .....+++..++.++.|++.|+.|||+ . +++||||+|+||+++.++.++++|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999998854 234458899999999999999999996 5 899999999999999999999999
Q ss_pred cCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 836 FGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 836 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
||.+....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||.... ........
T Consensus 158 fg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-----------~~~~~~~~ 225 (269)
T cd08528 158 FGLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN-----------MLSLATKI 225 (269)
T ss_pred ccceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-----------HHHHHHHH
Confidence 99998655443 3345568889999999998889999999999999999999999975321 12222333
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
......+.. .......+.+++.+||..||++||++.||..+++
T Consensus 226 ~~~~~~~~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 226 VEAVYEPLP----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred hhccCCcCC----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 332222211 1123456788899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=314.11 Aligned_cols=194 Identities=22% Similarity=0.385 Sum_probs=160.4
Q ss_pred cceeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--CceeEEEEEe
Q 037111 694 SFCIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH--ARHSFLVYEY 768 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 768 (964)
.++||+|+||+||+|+.+ +++.||+|.+..... ...+.+|+.++++++||||+++++++.. +...++||||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 467999999999999764 467899999864321 2456789999999999999999999854 4578999999
Q ss_pred ccCCCHHHHhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE----CCCCceEEeccC
Q 037111 769 LERGSLARILSSE-------TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL----DFEYEAHVSDFG 837 (964)
Q Consensus 769 ~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg 837 (964)
+.+ +|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +..+.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 82 AEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred cCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 965 898887532 123588899999999999999999999 99999999999999 456789999999
Q ss_pred cccccCCCCC---CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 037111 838 TAKLLKPDSS---NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLL 895 (964)
Q Consensus 838 ~a~~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~ 895 (964)
+++....... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9987654322 22345789999999998764 5889999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=314.63 Aligned_cols=250 Identities=23% Similarity=0.364 Sum_probs=203.2
Q ss_pred cccccceeecCCceeEEEEEeCCCC-eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGD-TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
-|+++.-||.|+||.||+|..++.. ..|.|.+.. ........++-||+++...+||+||++++.|..++.+|++.||
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 3666777999999999999776443 345666542 2344467889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
|.||-++..+-.-+ ..+.+.++.-+++|++.||.|||+. +|||||+|+.|||++-+|.++++|||++......-..
T Consensus 111 C~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk 186 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK 186 (1187)
T ss_pred cCCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence 99999988876543 4589999999999999999999999 9999999999999999999999999998766555555
Q ss_pred ccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 849 WSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
...+.|||.|||||+.. ..+|++++||||||+++.||..+.+|..... .-..+-++... -||.
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln-----------pMRVllKiaKS-ePPT 254 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN-----------PMRVLLKIAKS-EPPT 254 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc-----------hHHHHHHHhhc-CCCc
Confidence 67789999999999865 5689999999999999999999999943222 22333333322 2222
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+......+.+++.+|+.++|+.||+++++++
T Consensus 255 --LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 255 --LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred --ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 2234556677888888999999999999999875
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=306.22 Aligned_cols=249 Identities=27% Similarity=0.437 Sum_probs=196.5
Q ss_pred ceeecCCceeEEEEEeCC-------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 695 FCIGRGGYGSVYKAELPS-------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
+.||+|+||.||+|+.++ +..||+|.+... ........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 358999999999997642 257899987642 223345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-----ceEEeccC
Q 037111 768 YLERGSLARILSSET-----ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-----EAHVSDFG 837 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-----~~kl~Dfg 837 (964)
|+++|+|.+++.... ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++ .++++|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 999999999997532 23478899999999999999999998 999999999999999887 89999999
Q ss_pred cccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHh
Q 037111 838 TAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 838 ~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
++........ ......++..|+|||.+.++.++.++|||||||++|||++ |+.||.... ..+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~-----------~~~~~~~ 225 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN-----------NQEVLQH 225 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC-----------HHHHHHH
Confidence 9976543321 1122345678999999999999999999999999999998 999975221 1122222
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
+....... .....+..+.+++.+||.++|++||++++|++.|+.
T Consensus 226 ~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 226 VTAGGRLQ-----KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HhcCCccC-----CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 21111111 112345668889999999999999999999999863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=319.03 Aligned_cols=263 Identities=22% Similarity=0.319 Sum_probs=194.8
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------ 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 759 (964)
..++|+..+.||+|+||.||+|.. .+++.||||++............+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 346799999999999999999965 4688999999875433333446677899999999999999999988543
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
...|+++|++ +++|.+++.. ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccc
Confidence 3578999998 6799988753 3488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHHh
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAIDH 914 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~ 914 (964)
+..... .....|++.|+|||++.+ ..++.++||||+||++|+|++|+.||.......... ..+....+....
T Consensus 166 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 166 RQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred eecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 865432 234568999999999876 568899999999999999999999985322110000 000000000000
Q ss_pred h-------hccCC---CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 915 M-------FDARL---PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 915 ~-------~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+ ....+ +..............+.+++.+|+..||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00000 000000000112234678999999999999999999874
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=323.73 Aligned_cols=191 Identities=23% Similarity=0.302 Sum_probs=165.9
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
..|.+.+.||+|+||.||+|..+ .++.||||... ...+.+|+.++++++|||||++++++..++..++|||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 46999999999999999999765 57889999642 1345689999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
++. ++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 241 ~~~-~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 241 KYR-SDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred ccC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 995 69999886543 3589999999999999999999999 999999999999999999999999999976543322
Q ss_pred C--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCC
Q 037111 848 N--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPK 892 (964)
Q Consensus 848 ~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~ 892 (964)
. .....||+.|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 1 22356899999999999999999999999999999999988764
|
|
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=304.50 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=199.1
Q ss_pred hcccccceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|...+.||+|+||.||+|...+ ...||||...... .....+.+.+|+.++++++||||+++++++.+ ...++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 458888999999999999997643 2468999876432 23445688999999999999999999999876 45789
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 84 VMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 999999999999996543 3489999999999999999999998 999999999999999999999999999976654
Q ss_pred CCCC-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-CCC
Q 037111 845 DSSN-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLP 921 (964)
Q Consensus 845 ~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 921 (964)
.... .....+++.|+|||.+....++.++||||||+++||+++ |+.||..... .+....+... +.+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-----------~~~~~~~~~~~~~~ 228 (270)
T cd05056 160 ESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN-----------NDVIGRIENGERLP 228 (270)
T ss_pred ccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH-----------HHHHHHHHcCCcCC
Confidence 3221 122234568999999988889999999999999999996 9999753221 1222222211 111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+ ..++..+.+++.+|+..+|++|||+.++++.|+
T Consensus 229 ~~------~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 229 MP------PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263 (270)
T ss_pred CC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 233456888999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=312.68 Aligned_cols=266 Identities=23% Similarity=0.374 Sum_probs=201.2
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||.||+|..+ +++.||+|++..........+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888999999999999999775 58899999986544333345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.++.... ..+++..+..++.|+++|++|||+. +++||||+|+||++++++.++++|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 99999998877543 3388999999999999999999999 999999999999999999999999999987654444
Q ss_pred Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccC--------CCCCCCCh-----hHHHH
Q 037111 848 NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD--------SSLPGANM-----NEAID 913 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~--------~~~~~~~~-----~~~~~ 913 (964)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||........ ........ .....
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence 3344567889999999875 3478899999999999999999998853221100 00000000 00000
Q ss_pred hhhccCCCC-CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPP-PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+....... .............+.+++.+||+.+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000 0000011233466889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=309.46 Aligned_cols=266 Identities=21% Similarity=0.299 Sum_probs=200.2
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc---hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE---TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+|+..+.||+|+||.||+|..+ +++.||||++...... ......+..|++++++++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999764 6899999998754322 22335577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+ +|+|.+++.... ..+++..+..++.||++||+|||++ +++||||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 889999996544 3589999999999999999999999 9999999999999999999999999999876654
Q ss_pred CCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-----CCCCCChhHHH--H---h
Q 037111 846 SSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-----SLPGANMNEAI--D---H 914 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~--~---~ 914 (964)
........+++.|+|||.+.+ ..++.++|||||||++|||++|..||......... ........... . .
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD 235 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccc
Confidence 433344456788999998864 45789999999999999999997776532211000 00000000000 0 0
Q ss_pred hhc-cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 915 MFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 915 ~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
... ...++.............+.+++.+||+++|++||+++||++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000 0000000011112335678899999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=307.69 Aligned_cols=253 Identities=25% Similarity=0.375 Sum_probs=200.6
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||.||+|..+ ++..||+|.+... ........+.+|+.++++++||||+++++++...+..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 36888999999999999999765 7899999988643 233445678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 768 YLERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
|+++++|.+++.... ...+++..+..++.|+++|+.|||+.. +|+||||||+||+++.++.++++|||.+.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 999999999986532 235899999999999999999999632 89999999999999999999999999987654322
Q ss_pred CCccccccccccccccccccCC------CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 847 SNWSELAGTYGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~------~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.....+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||..... .........+.....
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~ 227 (286)
T cd06622 158 --AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY--------ANIFAQLSAIVDGDP 227 (286)
T ss_pred --cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch--------hhHHHHHHHHhhcCC
Confidence 22345788999999986543 47899999999999999999999853211 111112222222221
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+. .......++.+++.+||..+|++||++++++.
T Consensus 228 ~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 228 PT-----LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred CC-----CCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 11 11235566788999999999999999999876
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=301.62 Aligned_cols=249 Identities=22% Similarity=0.364 Sum_probs=194.9
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC---chhhHHHHHHHHHHHhCCCCCceeeEEeeeec--CceeE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG---ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH--ARHSF 763 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 763 (964)
+|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|+.++++++||||+++++++.+ ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 6888999999999999999654 688999998864322 22334568889999999999999999999875 35788
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
++|||+++++|.+++.... .+++.....++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++....
T Consensus 83 l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 9999999999999996543 378889999999999999999998 99999999999999999999999999987654
Q ss_pred CCC---CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDS---SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
... .......++..|+|||.+.+..++.++||||+||++|||++|+.||..... .+..........
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~-----------~~~~~~~~~~~~ 226 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA-----------MAAIFKIATQPT 226 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch-----------HHHHHHHhcCCC
Confidence 321 112234578899999999988899999999999999999999999853211 122222211111
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+. ........+.+++ +||..+|++||+++||++
T Consensus 227 ~~~----~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 NPQ----LPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCC----CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 111 1122334455555 788899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=301.84 Aligned_cols=237 Identities=27% Similarity=0.439 Sum_probs=187.9
Q ss_pred ceeecCCceeEEEEEeCCCC-----------eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 695 FCIGRGGYGSVYKAELPSGD-----------TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
+.||+|+||.||+|..++.. .|++|.+.... .....+.+|+.++++++||||+++++++.. ...+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 36899999999999775433 47777765322 115788899999999999999999999988 7789
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-------ceEEecc
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-------EAHVSDF 836 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-------~~kl~Df 836 (964)
+||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++ .+|++||
T Consensus 77 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCC
Confidence 99999999999999976543 588999999999999999999998 999999999999999888 7999999
Q ss_pred CcccccCCCCCCccccccccccccccccccC--CCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHH
Q 037111 837 GTAKLLKPDSSNWSELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 837 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
|++...... ....++..|+|||++.+. .++.++||||||+++|||++ |..||..... .+...
T Consensus 153 g~a~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-----------~~~~~ 217 (259)
T cd05037 153 GIPITVLSR----EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-----------SEKER 217 (259)
T ss_pred Ccccccccc----cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-----------hhHHH
Confidence 999765431 233566789999998876 78999999999999999999 4666643211 01111
Q ss_pred hh-hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 914 HM-FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 914 ~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.. .....+.+ ....+.+++.+||..+|++||++.+|++.|+
T Consensus 218 ~~~~~~~~~~~--------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 218 FYQDQHRLPMP--------DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHhcCCCCCCC--------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11 11111111 1156888999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=303.97 Aligned_cols=254 Identities=26% Similarity=0.389 Sum_probs=198.5
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCc--------hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGE--------TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
+|...+.||+|+||.||+|.. .+++.||+|.++..... ....+.+.+|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 477788999999999999965 46889999987532111 111346788999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+++|+|.+++... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999999765 3588899999999999999999998 99999999999999999999999999997
Q ss_pred ccCCCCC--CccccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 841 LLKPDSS--NWSELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 841 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
....... ......++..|+|||.+.... ++.++||||+|+++||+++|..||..... .+...+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~ 225 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-----------IAAMFKLG 225 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-----------HHHHHHhh
Confidence 6543211 122345788999999987654 78999999999999999999999752211 11111111
Q ss_pred ccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+..........+..+.+++.+||+++|++||++++|++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 226 NKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1111111111122334567888999999999999999999985
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=306.31 Aligned_cols=239 Identities=25% Similarity=0.431 Sum_probs=186.8
Q ss_pred eeecCCceeEEEEEeCC--------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 696 CIGRGGYGSVYKAELPS--------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.||+|+||.||+|..+. ..+||+|.+... .......+.+|+.+++.++||||+++++++..+...++|||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 58999999999996532 234888876532 22334578889999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc--------eEEeccCcc
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE--------AHVSDFGTA 839 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~--------~kl~Dfg~a 839 (964)
|+++|+|.+++..... .+++..+.+++.||+.|++|||+. +|+||||||+||+++.++. ++++|||.+
T Consensus 80 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 80 YVKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred cCCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccc
Confidence 9999999999976443 578999999999999999999999 9999999999999988765 699999988
Q ss_pred cccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCC-CCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQ-HPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
...... ....+++.|+|||++.+. .++.++||||||+++|||++|. .|+..... ... .....
T Consensus 156 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-----------~~~-~~~~~ 219 (258)
T cd05078 156 ITVLPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-----------QKK-LQFYE 219 (258)
T ss_pred cccCCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-----------HHH-HHHHH
Confidence 655432 234578899999999864 5789999999999999999985 55432111 111 11111
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.....+ .....++.+++.+||+.||++|||++++++.|+
T Consensus 220 ~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 DRHQLP------APKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccccCC------CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111111 112245788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=308.14 Aligned_cols=258 Identities=26% Similarity=0.403 Sum_probs=201.2
Q ss_pred HHHHHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC
Q 037111 682 EEIIRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA 759 (964)
Q Consensus 682 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (964)
.++..+.++|+..+.||+|+||.||+|.. .+++.||+|.+... ......+.+|+.+++++ +|||++++++++...
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~---~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI---SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc---ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 34445678899999999999999999976 46889999998642 22245677899999988 799999999998653
Q ss_pred -----ceeEEEEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceE
Q 037111 760 -----RHSFLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH 832 (964)
Q Consensus 760 -----~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~k 832 (964)
+..++||||+++|+|.++++. .....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence 368999999999999999864 2334588999999999999999999999 999999999999999999999
Q ss_pred EeccCcccccCCCCCCccccccccccccccccccC-----CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCC
Q 037111 833 VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGAN 907 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~ 907 (964)
|+|||.+..............++..|+|||.+... .++.++|||||||++|||++|+.||.....
T Consensus 169 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~---------- 238 (291)
T cd06639 169 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP---------- 238 (291)
T ss_pred EeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH----------
Confidence 99999998665443333345688899999987643 368899999999999999999999753221
Q ss_pred hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+...++.....+.. .........+.+++.+||+.+|++||++.++++
T Consensus 239 -~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 239 -VKTLFKIPRNPPPTL---LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -HHHHHHHhcCCCCCC---CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 122222221111110 011233456888999999999999999999875
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=306.26 Aligned_cols=254 Identities=26% Similarity=0.406 Sum_probs=202.2
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCc---
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHAR--- 760 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~--- 760 (964)
.++++|+..+.||+|++|.||+|..+ +++.|++|++.... .....+.+|+.+++++ +||||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 35688999999999999999999764 67889999886432 2346788999999998 6999999999997644
Q ss_pred ---eeEEEEEeccCCCHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEec
Q 037111 761 ---HSFLVYEYLERGSLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSD 835 (964)
Q Consensus 761 ---~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~D 835 (964)
..++||||+++++|.+++.... ...+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++++|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 4899999999999999986533 45688999999999999999999999 999999999999999999999999
Q ss_pred cCcccccCCCCCCcccccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhH
Q 037111 836 FGTAKLLKPDSSNWSELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 836 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
||.+..............+++.|+|||.+.. ..++.++||||||+++|+|++|+.||..... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----------~~ 225 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP-----------MR 225 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch-----------HH
Confidence 9999766544444445568899999998753 3467899999999999999999999853211 11
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+..... +.. .........+.+++.+||..||++|||+.++++
T Consensus 226 ~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 226 ALFKIPRNPP-PTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHHHhhccCC-CCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1222221111 111 111234567889999999999999999999975
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=303.87 Aligned_cols=254 Identities=24% Similarity=0.376 Sum_probs=198.7
Q ss_pred ccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------
Q 037111 691 FDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------ 760 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 760 (964)
|++.+.||+|+||.||+|..+ +++.||||++..........+++.+|+.++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566788999999999999653 4678999998754444455677889999999999999999999886532
Q ss_pred eeEEEEEeccCCCHHHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEecc
Q 037111 761 HSFLVYEYLERGSLARILSSE----TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDF 836 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df 836 (964)
..++++||+++|+|.+++... ....+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 347899999999999887532 223478889999999999999999998 9999999999999999999999999
Q ss_pred CcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHH
Q 037111 837 GTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 837 g~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
|.++....... ......+++.|++||.+....++.++||||||+++|||++ |+.||.... ..+...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~-----------~~~~~~ 226 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE-----------NSEIYN 226 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC-----------HHHHHH
Confidence 99986643321 1123345678999999998889999999999999999999 788864211 122222
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.+........ ....+..+.+++.+||+.+|++||++.++++.|++
T Consensus 227 ~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 227 YLIKGNRLKQ-----PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HHHcCCcCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 2222211110 11244578899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=309.27 Aligned_cols=252 Identities=24% Similarity=0.390 Sum_probs=196.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCC----eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.+|+..+.||+|+||.||+|... +++ .||+|.+.... ......++.+|+.++++++||||+++++++... ..+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 46788899999999999999653 444 47888876432 233345788999999999999999999998754 467
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+|+||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccccc
Confidence 9999999999999986543 3478899999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
..... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+.....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~-----------~~~~~~~~~~~~~ 229 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP-----------TREIPDLLEKGER 229 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHCCCC
Confidence 33221 122345678999999998899999999999999999997 888874211 1111111111111
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+. ...+...+.+++.+||..+|++||+++++++.|+
T Consensus 230 ~~~-----~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 230 LPQ-----PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred CCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 0123346788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=319.94 Aligned_cols=191 Identities=22% Similarity=0.319 Sum_probs=163.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
..+|++.+.||+|+||.||+|+.. +++.||+|+... .....|+.++++++||||+++++++......++||
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~--------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK--------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc--------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 457999999999999999999765 567899997432 12346899999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+. |+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.++......
T Consensus 137 e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 137 PHYS-SDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred EccC-CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence 9995 59999886543 4589999999999999999999999 99999999999999999999999999997543222
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCC
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPK 892 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~ 892 (964)
......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 212 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 -AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred -ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 223456899999999999999999999999999999999865553
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=303.46 Aligned_cols=259 Identities=25% Similarity=0.322 Sum_probs=202.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 765 (964)
++|+..+.||.|++|.||+|..+ +++.||+|.+.... .......+.+|++++++++||||+++++++.+. ...++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP-NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC-chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 36888999999999999999764 67889999886432 224456789999999999999999999998653 478999
Q ss_pred EEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 766 YEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
|||+++++|.+++.. .....+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 999999999998764 2334578889999999999999999999 99999999999999999999999999987554
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC-
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP- 922 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 922 (964)
.... ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||+..... .....+....+.....+.
T Consensus 157 ~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd06621 157 NSLA--GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP------PLGPIELLSYIVNMPNPEL 228 (287)
T ss_pred cccc--ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC------CCChHHHHHHHhcCCchhh
Confidence 3221 2345778899999999889999999999999999999999998744320 111112222222211111
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+............+.+++.+||+.+|++|||+.||++
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 229 KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0000111224566889999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=320.65 Aligned_cols=258 Identities=21% Similarity=0.251 Sum_probs=196.1
Q ss_pred hcccccceeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.+|++.+.||+|+||.||++... .++.||+|.+... ..+.+|+.++++++||||+++++++......++|
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 47999999999999999999643 4578999987531 2345799999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
||++. ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++.....
T Consensus 165 ~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 165 MPKYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred ehhcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 99996 589998843 34589999999999999999999999 9999999999999999999999999999765543
Q ss_pred CCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc---------------CCCCCCCCh
Q 037111 846 SSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS---------------DSSLPGANM 908 (964)
Q Consensus 846 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~---------------~~~~~~~~~ 908 (964)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...++....
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 222 234578999999999999999999999999999999999999985432210 000111111
Q ss_pred hHHHHhh--hccCCCCCcccc---chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 909 NEAIDHM--FDARLPPPWLEV---GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 909 ~~~~~~~--~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....... +.....+++... .......++.+++.+|+..||++||++.|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111111 000111110000 00122345778899999999999999999875
|
|
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=307.31 Aligned_cols=250 Identities=25% Similarity=0.424 Sum_probs=202.7
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|.. .+++.||+|.+... .....+.+.+|+.++++++||||+++++++...+..|+|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc--cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 36899999999999999999965 46889999998532 2233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 96 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred ecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 999999999998643 378889999999999999999999 99999999999999999999999999987665544
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.......+++.|+|||.+.+..++.++||||||+++|++++|+.||........ ...+.....+ . .
T Consensus 170 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-----------~~~~~~~~~~-~--~ 235 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----------LYLIATNGTP-E--L 235 (293)
T ss_pred cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-----------eeehhcCCCC-C--C
Confidence 444455688899999999888899999999999999999999999864322111 0000001111 0 0
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........+.+++.+||..+|++||++++++.
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111233456778899999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=307.20 Aligned_cols=266 Identities=24% Similarity=0.376 Sum_probs=201.7
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||.||+|..+ +++.||+|+++...........+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36889999999999999999765 57899999987544444445788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|++++.+..+.... ..+++..+..++.|++.|++|||+. +++|||++|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99987777665432 3488999999999999999999999 999999999999999999999999999987665432
Q ss_pred -CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCC--------CCCCCChh-HHHHhhh
Q 037111 848 -NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS--------SLPGANMN-EAIDHMF 916 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~--------~~~~~~~~-~~~~~~~ 916 (964)
......++..|+|||++.+. .++.++||||||+++|+|++|+.||......... ..+..... .......
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 33345678899999999888 7899999999999999999999998632211000 00000000 0000000
Q ss_pred cc-CCCCCccc-----cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 DA-RLPPPWLE-----VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~~-~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. ..++.... ........++.+++.+||..+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00 00000000 001112567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=308.48 Aligned_cols=256 Identities=21% Similarity=0.268 Sum_probs=202.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||++..+ +++.||+|.+..... .......+.+|+.+++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999765 578999998864322 1233457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++||+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999996543 488899999999999999999999 99999999999999999999999999886421110
Q ss_pred C---------------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHH
Q 037111 847 S---------------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911 (964)
Q Consensus 847 ~---------------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 911 (964)
. ......++..|+|||.+.+..++.++||||||+++|||++|+.||.. ....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~-----------~~~~~~ 224 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG-----------DTPEEL 224 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC-----------CCHHHH
Confidence 0 01123567889999999988899999999999999999999999742 122333
Q ss_pred HHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
...........+.. ....+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 225 ~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 225 FGQVISDDIEWPEG---DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHHhcccCCCCc---cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 44433332221111 11244567889999999999999997766666653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=332.04 Aligned_cols=254 Identities=25% Similarity=0.444 Sum_probs=200.8
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec------
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------ 758 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 758 (964)
+...+|++...||+||||.||+++.+ ||+.||||++.... .......+.+|+..+++++|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 45678899999999999999999876 89999999998654 55666789999999999999999999932200
Q ss_pred --------------------------------------------------------------------------------
Q 037111 759 -------------------------------------------------------------------------------- 758 (964)
Q Consensus 759 -------------------------------------------------------------------------------- 758 (964)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -------------------------C--------ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 037111 759 -------------------------A--------RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYM 805 (964)
Q Consensus 759 -------------------------~--------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~L 805 (964)
+ ..+|+-||||+.-+++++++.+.... .....++++.+|++|++|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHH
Confidence 0 12589999999988888887654322 4578889999999999999
Q ss_pred hhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC------------------CCCCCccccccccccccccccccC
Q 037111 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK------------------PDSSNWSELAGTYGYVAPELAYTM 867 (964)
Q Consensus 806 H~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~------------------~~~~~~~~~~g~~~y~aPE~~~~~ 867 (964)
|++ |||||||||.||++|+++.|||+|||+|.... ......+..+||.-|+|||.+.+.
T Consensus 714 H~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 999 99999999999999999999999999998622 011123456799999999999865
Q ss_pred C---CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHcc
Q 037111 868 K---VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCV 944 (964)
Q Consensus 868 ~---~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 944 (964)
. |+.|+||||+|++++||+. ||.. .+.....+....++.+|.+ .....+....=..+|.+++
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~T----------sMERa~iL~~LR~g~iP~~--~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGT----------SMERASILTNLRKGSIPEP--ADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCc----------hHHHHHHHHhcccCCCCCC--cccccccchHHHHHHHHHh
Confidence 5 9999999999999999994 4531 2333456666667777765 1122233333457888999
Q ss_pred CCCCCCCCCHHHHHH
Q 037111 945 DANPERRPNMQIVCK 959 (964)
Q Consensus 945 ~~dp~~RPs~~evl~ 959 (964)
+.||.+||||.|+++
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999975
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=300.52 Aligned_cols=252 Identities=28% Similarity=0.448 Sum_probs=202.6
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|+||.||+|... +++.||+|.++.........+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4788899999999999999754 788999999876544445667899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++++|.+++... ..+++..+..++.++++|++|||+. +++|+||+|+||+++.++.+||+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999654 3478889999999999999999999 9999999999999999999999999999876544332
Q ss_pred c----cccccccccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 849 W----SELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 849 ~----~~~~g~~~y~aPE~~~~~~---~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
. ....+++.|+|||.+.+.. ++.++||||||+++|||++|+.||..... .......+.....+
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~----------~~~~~~~~~~~~~~ 225 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN----------EFQIMFHVGAGHKP 225 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc----------hHHHHHHHhcCCCC
Confidence 2 2346788999999998766 88999999999999999999999863211 11111111111111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.- .........+.+++.+||+.+|++||++.+++.
T Consensus 226 ~~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 226 PI---PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CC---CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00 011123455778899999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=328.71 Aligned_cols=198 Identities=19% Similarity=0.270 Sum_probs=161.5
Q ss_pred HHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC------CCCceeeEEeeee
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV------RHRNIVKFYGFCS 757 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~ 757 (964)
....++|++.+.||+|+||+||+|... .++.||||+++... .....+..|+.+++.+ +|.+++++++++.
T Consensus 125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 344578999999999999999999654 57889999986421 1223344566555554 4566899999987
Q ss_pred cC-ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCC------
Q 037111 758 HA-RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEY------ 829 (964)
Q Consensus 758 ~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~------ 829 (964)
.+ .+.++|||++ +++|.+++... ..+++..+..++.||+.||+|||+ . +||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccccc
Confidence 65 5789999988 67999988654 358899999999999999999997 5 899999999999998765
Q ss_pred ----------ceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 830 ----------EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 830 ----------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
.+||+|||.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||+.
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~~---~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDERH---SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred cccccCCCCceEEECCCCccccCcc---ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 499999998864322 22346789999999999999999999999999999999999999964
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=303.13 Aligned_cols=248 Identities=28% Similarity=0.459 Sum_probs=199.5
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC---CCceeeEEeeeecCceeEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR---HRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 765 (964)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ......++.+|+.++++++ |||++++++++..+...++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 477788999999999999975 578999999886432 2334467888999988886 99999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 81 MEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred EecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 9999999999998543 588999999999999999999999 9999999999999999999999999999877655
Q ss_pred CCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
........|+..|+|||.+.++ .++.++|||||||++|+|++|+.||...... ......... .++..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----------~~~~~~~~~-~~~~~ 222 (277)
T cd06917 155 SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----------RAMMLIPKS-KPPRL 222 (277)
T ss_pred ccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----------hhhhccccC-CCCCC
Confidence 4444455788999999988654 4688999999999999999999998632221 111111111 11111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ......++.+++.+||+.||++||++.++++
T Consensus 223 ~---~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 223 E---DNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred C---cccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 1 1114456888999999999999999999975
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=305.66 Aligned_cols=263 Identities=22% Similarity=0.332 Sum_probs=199.2
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|+..+.||.|++|.||+|..+ +|..||+|++............+.+|+++++.++|||++++++++.++...++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567889999999999999754 7999999998654333333467888999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 849 (964)
+ ++|.+++.......+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++++|||.+..........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 156 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY 156 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc
Confidence 5 6999999766545689999999999999999999998 99999999999999999999999999997654333222
Q ss_pred cccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------CCCCCC-------hhHHHHh
Q 037111 850 SELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------SLPGAN-------MNEAIDH 914 (964)
Q Consensus 850 ~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------~~~~~~-------~~~~~~~ 914 (964)
....+++.|+|||++.+. .++.++||||||+++|+|++|+.||......... ..+... ..+....
T Consensus 157 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07835 157 THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT 236 (283)
T ss_pred CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhh
Confidence 334568899999987664 5788999999999999999999998533221000 000000 0000000
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. ..+..............+.+++.+|+++||++||+++|+++
T Consensus 237 ~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 237 FP--KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred cc--cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 00000001111223356889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=303.96 Aligned_cols=252 Identities=27% Similarity=0.445 Sum_probs=205.6
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..+.|+..+.||+|++|.||+|..+ +++.||+|++..... ....+.+|++.+++++|+|++++++++......++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4456888889999999999999776 688999999864322 456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
+||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 99999999999997654 3589999999999999999999998 9999999999999999999999999998765544
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........+++.|+|||.+.+..++.++|||||||++|+|++|+.||..... ......+.....+..
T Consensus 170 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~-- 236 (286)
T cd06614 170 KSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP-----------LRALFLITTKGIPPL-- 236 (286)
T ss_pred hhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhcCCCCC--
Confidence 3333344578899999999888899999999999999999999999753211 112222222111111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........+.+++.+||+.+|.+||++.++++
T Consensus 237 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 237 -KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred -cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 111224566888999999999999999999975
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=309.72 Aligned_cols=194 Identities=23% Similarity=0.390 Sum_probs=159.6
Q ss_pred cceeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--CceeEEEEEe
Q 037111 694 SFCIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH--ARHSFLVYEY 768 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 768 (964)
..+||+|+||.||+|+.+ ++..||+|.+.... ....+.+|+.++++++||||+++++++.. +...++||||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 467999999999999765 45789999886422 22457789999999999999999999854 4678999999
Q ss_pred ccCCCHHHHhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE----CCCCceEEeccC
Q 037111 769 LERGSLARILSSE-------TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL----DFEYEAHVSDFG 837 (964)
Q Consensus 769 ~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg 837 (964)
+++ +|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 875 888887532 223478889999999999999999999 99999999999999 556789999999
Q ss_pred cccccCCCCC---CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 037111 838 TAKLLKPDSS---NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLL 895 (964)
Q Consensus 838 ~a~~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~ 895 (964)
+++....... ......+++.|+|||.+.+. .++.++|||||||++|||+||+.||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9987654322 22345688999999998764 5789999999999999999999998643
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=304.87 Aligned_cols=245 Identities=24% Similarity=0.331 Sum_probs=201.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||++... +++.||+|.+..... .......+.+|++++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888999999999999999764 688999999864321 2233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999999665 3588999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.....+++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+....+.....+.+
T Consensus 155 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~--- 218 (290)
T cd05580 155 --TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-----------PIQIYEKILEGKVRFP--- 218 (290)
T ss_pred --CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHhcCCccCC---
Confidence 234568899999999988889999999999999999999999975322 1223333333332221
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRP-----NMQIVC 958 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl 958 (964)
......+.+++.+||..||++|| +++|++
T Consensus 219 ---~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 219 ---SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred ---ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 11235677888999999999999 677765
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=306.69 Aligned_cols=265 Identities=25% Similarity=0.341 Sum_probs=200.8
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|++.+.||+|+||.||+|... +|+.||+|++............+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999764 689999999875443344456789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC-
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS- 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~- 847 (964)
+ +++|.+++.... ..+++.++..++.||++|++|||+. +++|+||+|+||+++.++.++++|||.+........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 9 999999986544 5589999999999999999999999 999999999999999999999999999987654331
Q ss_pred CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------CCCCC-ChhH-----HHH
Q 037111 848 NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------SLPGA-NMNE-----AID 913 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------~~~~~-~~~~-----~~~ 913 (964)
......++..|+|||.+.+. .++.++||||+|+++|||++|+.||......... ..+.. ...+ ...
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYN 235 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhh
Confidence 23345688899999998654 4689999999999999999998776432210000 00000 0000 000
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+.....+.........+....+.+++.+|++.+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000000000111123467889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=313.05 Aligned_cols=245 Identities=24% Similarity=0.415 Sum_probs=195.2
Q ss_pred cceeecCCceeEEEEEe-CCCCeEEEEEe--ccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc--eeEEEEEe
Q 037111 694 SFCIGRGGYGSVYKAEL-PSGDTVAVKKL--HSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR--HSFLVYEY 768 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~--~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~ 768 (964)
...||+|+|-+||+|-. .+|-.||-=.+ .+....+.....|..|+.+++.++||||+++|.++.+.. ...+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 45699999999999954 45777764332 222334444578999999999999999999999998765 47899999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccCcccccCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~a~~~~~~~~ 847 (964)
|..|+|..|.++... .....++.|++||++||.|||++ .++|||||||.+||||+.+ |.|||+|.|+|........
T Consensus 125 ~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred ccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 999999999977654 77889999999999999999998 6799999999999999765 8999999999988765543
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
..+.|||.|||||... ..|.+.+||||||+.++||+|+.+||. ......+...++..+ ++|.....
T Consensus 202 --ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs----------EC~n~AQIYKKV~SG-iKP~sl~k 267 (632)
T KOG0584|consen 202 --KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS----------ECTNPAQIYKKVTSG-IKPAALSK 267 (632)
T ss_pred --ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh----------hhCCHHHHHHHHHcC-CCHHHhhc
Confidence 3479999999999876 679999999999999999999999964 122233344444444 44433333
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.... ++.++|.+|+.. ..+|||+.|+++
T Consensus 268 V~dP---evr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 268 VKDP---EVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred cCCH---HHHHHHHHHhcC-chhccCHHHHhh
Confidence 3333 366777799999 999999999985
|
|
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=298.59 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=200.5
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC---chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG---ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+|+..+.||+|+||.||+|..+ +++.||+|.+..... .....+.+.+|+.+++.++||||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4778889999999999999765 789999998864321 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999996543 478899999999999999999999 9999999999999999999999999998765433
Q ss_pred CCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc-cCCCCC
Q 037111 846 SSNWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD-ARLPPP 923 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 923 (964)
. ......+++.|+|||.+.... ++.++|+||||+++|+|++|+.||..... ......... ...+.
T Consensus 156 ~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-----------~~~~~~~~~~~~~~~- 222 (258)
T cd06632 156 S-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-----------VAAVFKIGRSKELPP- 222 (258)
T ss_pred c-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-----------HHHHHHHHhcccCCC-
Confidence 2 223456888999999987766 89999999999999999999999863221 111111111 11111
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......++.+++.+||+.+|++||++.++++
T Consensus 223 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 ----IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ----cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 11123456778889999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=305.83 Aligned_cols=266 Identities=21% Similarity=0.334 Sum_probs=198.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|++|.||+|..+ +++.||+|++............+.+|+.++++++||||+++++++.++...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57899999999999999999765 68899999986543333344678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceEEeccCcccccCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~ 846 (964)
|++ +++.+++........++..+..++.||+.||+|||++ +++||||+|+||+++. ++.+|++|||.+.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 5888888665555568888899999999999999999 9999999999999985 5679999999997654433
Q ss_pred CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------------CCCCCChhHHH
Q 037111 847 SNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------------SLPGANMNEAI 912 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------------~~~~~~~~~~~ 912 (964)
.......+++.|+|||++.+. .++.++||||+|+++|+|+||+.||......... .+.+.......
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (294)
T PLN00009 158 RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDY 237 (294)
T ss_pred cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhh
Confidence 333344678899999988664 5789999999999999999999998643221000 00000000000
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. .....++............++.+++.+|++.+|++||++.++++
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 238 KS-AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hh-hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 00000110000011123355788999999999999999999875
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=306.21 Aligned_cols=248 Identities=25% Similarity=0.398 Sum_probs=197.7
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|.....||+|+||.||++... ++..||||.+... .......+.+|+..++.++||||+++++.+..++..++||||+
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR--KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc--hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 444466999999999999654 6889999998542 2334567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 849 (964)
++++|.+++... .+++..+..++.||+.|++|||++ +|+||||||+||+++.++.++|+|||++..........
T Consensus 102 ~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~ 175 (292)
T cd06658 102 EGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR 175 (292)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC
Confidence 999999988532 478899999999999999999999 99999999999999999999999999987654443333
Q ss_pred cccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccch
Q 037111 850 SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929 (964)
Q Consensus 850 ~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (964)
....+++.|+|||.+.+..++.++||||||+++|||++|+.||..... ......+. ...++... ..
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----------~~~~~~~~-~~~~~~~~--~~ 241 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP-----------LQAMRRIR-DNLPPRVK--DS 241 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHH-hcCCCccc--cc
Confidence 445688999999999888899999999999999999999999753221 11111111 11111100 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 930 EDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 930 ~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
......+.+++.+||..||++|||++++++.
T Consensus 242 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 242 HKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1233457788889999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=300.45 Aligned_cols=247 Identities=26% Similarity=0.421 Sum_probs=201.1
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
-|+..+.||+|+||.||+|.. .+++.||+|.+..... ......+.+|+..+++++||||+++++++..+...++||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 477788999999999999965 4688999998754322 33446788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||.+.........
T Consensus 84 ~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06641 84 LGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchhh
Confidence 999999999854 3478999999999999999999998 9999999999999999999999999998766544333
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....++..|+|||.+.+..++.++|||||||++|+|++|..||..... ......+.....+ . .
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~-~----~ 221 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----------MKVLFLIPKNNPP-T----L 221 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----------HHHHHHHhcCCCC-C----C
Confidence 3345678899999999888899999999999999999999999753211 1122222111111 1 1
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+..+.+++.+||+.+|++||++.++++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1234456788899999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=310.05 Aligned_cols=250 Identities=24% Similarity=0.376 Sum_probs=210.6
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.+..|.+...||+|.|++|..|++ .++..||||.+.+...+....+.+.+|+++|+.++|||||+++++......+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 345789999999999999999965 4799999999988877777777799999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+.+|.+++|+.+.+. +.+..+..++.|+.+|++|+|++ .|||||||++||+++.++++||+|||++..+...
T Consensus 134 ~eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeeccc
Confidence 999999999999987665 44578889999999999999999 9999999999999999999999999999988733
Q ss_pred CCCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
....+.+|++.|.|||++.+..|. +++|+||+|+++|.|+.|..||+... ..+.-.+.+.+++.-+.
T Consensus 209 -~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~-----------lk~Lr~rvl~gk~rIp~ 276 (596)
T KOG0586|consen 209 -LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN-----------LKELRPRVLRGKYRIPF 276 (596)
T ss_pred -ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc-----------cccccchheeeeecccc
Confidence 445678999999999999988864 78999999999999999999987322 22333333334333221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
-...++-+++.+++-.+|.+|++++++.+
T Consensus 277 ------~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 277 ------YMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ------eeechhHHHHHHhhccCccccCCHHHhhh
Confidence 12233556777888899999999999875
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=302.24 Aligned_cols=247 Identities=25% Similarity=0.402 Sum_probs=199.4
Q ss_pred ccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|+..+.||+|++|.||+|.. .+++.||+|++... .......+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR--KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc--chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence 45557899999999999975 47889999988532 2233456889999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 849 (964)
++++|.+++.. ..+++..+..++.|++.|++|||++ +++||||+|+||+++.++.++++|||.+..........
T Consensus 99 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~ 172 (285)
T cd06648 99 EGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR 172 (285)
T ss_pred CCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCccc
Confidence 99999999865 3488899999999999999999999 99999999999999999999999999887654433333
Q ss_pred cccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccch
Q 037111 850 SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929 (964)
Q Consensus 850 ~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (964)
....|++.|+|||...+..++.++|||||||++|||++|+.||.... ..+....+.... ++.. ...
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~-----------~~~~~~~~~~~~-~~~~--~~~ 238 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP-----------PLQAMKRIRDNL-PPKL--KNL 238 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC-----------HHHHHHHHHhcC-CCCC--ccc
Confidence 34568899999999988889999999999999999999999975321 112222222221 1110 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 930 EDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 930 ~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.+|++||++.++++
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 239 HKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 123456888999999999999999999885
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=297.37 Aligned_cols=250 Identities=22% Similarity=0.321 Sum_probs=196.2
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC---chhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--cee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG---ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 762 (964)
.+|+..+.||+|+||.||+|..+ +++.||+|.+..... .......+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999764 588999998753221 122345788899999999999999999998764 468
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++||||+++|+|.+++.... .+++....+++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 89999999999999996543 377888899999999999999999 9999999999999999999999999999765
Q ss_pred CCCC---CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 843 KPDS---SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 843 ~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
.... .......++..|+|||.+.+..++.++|||||||++|||++|+.||.... ......+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-----------~~~~~~~~~~~~ 225 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE-----------AMAAIFKIATQP 225 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc-----------hHHHHHHHhcCC
Confidence 4321 11233468889999999988889999999999999999999999985321 112222222111
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+. ........+.+++.+|+ .+|++||++++|++
T Consensus 226 ~~~~----~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 226 TNPV----LPPHVSDHCRDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred CCCC----CchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence 1111 12233455677788898 49999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=290.20 Aligned_cols=259 Identities=21% Similarity=0.314 Sum_probs=211.2
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeee
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 756 (964)
++.....+++....+.+|.||.||+|.+. +.+.|.||.++. ...+.....+..|.-++....|||+.++.+++
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 44555567888889999999999999554 344577888775 34455567899999999999999999999998
Q ss_pred ecC-ceeEEEEEeccCCCHHHHhhh------cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 757 SHA-RHSFLVYEYLERGSLARILSS------ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 757 ~~~-~~~~lv~e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
.++ ..++++|+++.-|+|..|+.- ...+.+...+...++.|++.|++|||.+ +|||.||.++|+++|+.-
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhe
Confidence 654 578999999999999999972 3344567778899999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCCCCCcc--ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCC
Q 037111 830 EAHVSDFGTAKLLKPDSSNWS--ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGA 906 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~ 906 (964)
++|++|-.+++...+.++..- ..-.+..||+||.+....|+.++|||||||++|||+| |+.|+...+
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID---------- 503 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID---------- 503 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC----------
Confidence 999999999999887766532 2234568999999999999999999999999999998 899965333
Q ss_pred ChhHHHHhhhcc-CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 907 NMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 907 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+...-+.++ ++.. +-.|+.+++.+|.-||..+|++||++++++.-|+
T Consensus 504 -PfEm~~ylkdGyRlaQ------P~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 504 -PFEMEHYLKDGYRLAQ------PFNCPDELFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred -HHHHHHHHhccceecC------CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 23333333332 3332 3467888999999999999999999999988764
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=301.17 Aligned_cols=253 Identities=26% Similarity=0.429 Sum_probs=201.0
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCc----hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGE----TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
+|+..+.||+|+||.||+|.. .+++.||+|.+...... ......+..|+..+++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999965 57899999998643211 2234678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccCcccccC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLK 843 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~ 843 (964)
||||+++++|.+++.... ++++..+..++.|++.|++|||+. +++|+||+|+||+++.++ .++|+|||.+....
T Consensus 81 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 999999999999996543 478899999999999999999999 999999999999998776 59999999997665
Q ss_pred CCCCC----ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSN----WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||..... ..............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~ 227 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH--------SNHLALIFKIASAT 227 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--------cchHHHHHHHhccC
Confidence 43211 1234678899999999888899999999999999999999999853221 11111121211111
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+. .......++.+++.+|+..+|++||++.++++
T Consensus 228 ~~~~----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 228 TAPS----IPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCC----CchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 1111 12234566888999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=306.92 Aligned_cols=267 Identities=21% Similarity=0.273 Sum_probs=196.6
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCce-----
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARH----- 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 761 (964)
++|+..+.||+|+||.||+|... +++.||+|++............+.+|+.++++++ ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36889999999999999999764 6889999987654333334467888999999995 6999999999987665
Q ss_pred eEEEEEeccCCCHHHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceEEeccC
Q 037111 762 SFLVYEYLERGSLARILSSET---ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAHVSDFG 837 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg 837 (964)
.|+||||+++ +|.+++.... ...+++..+..++.||++||+|||+. +++||||+|+||+++. ++.+|++|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999986 8999886532 23579999999999999999999999 9999999999999998 8899999999
Q ss_pred cccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------CCCCC-Ch
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------SLPGA-NM 908 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------~~~~~-~~ 908 (964)
.+..............+++.|+|||.+.+ ..++.++||||||+++|+|++|..||......... ..+.. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence 99765443332233456888999998865 45789999999999999999999998532211000 00000 00
Q ss_pred h---HHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 909 N---EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 909 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ............+............++.+++.+||.+||++||+++|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 00000000000110001111224456888999999999999999999874
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=305.11 Aligned_cols=267 Identities=22% Similarity=0.297 Sum_probs=199.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 764 (964)
.++|+..+.||+|+||.||+|..+ +++.||+|.++...........+.+|+.++++++||||+++++++... ...++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 457889999999999999999775 688999999875433333345677899999999999999999998877 89999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++ +|.+++..... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.+.....
T Consensus 84 v~e~~~~-~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 84 VMEYVEH-DLKSLMETMKQ-PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred EehhcCc-CHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 9999975 99999865433 589999999999999999999999 999999999999999999999999999987665
Q ss_pred CCCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHH---hhh
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAID---HMF 916 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~---~~~ 916 (964)
.........+++.|+|||.+.+.. ++.++||||+|+++|||++|+.||.......... .-+........ ...
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 433334456788999999987644 6889999999999999999999986332110000 00000000000 000
Q ss_pred c---cCC---CCCccccchHH--HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 D---ARL---PPPWLEVGVED--KLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~---~~~---~~~~~~~~~~~--~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ... ........... ....+.+++.+||+.+|++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 000 00000000011 2455778899999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=301.28 Aligned_cols=249 Identities=24% Similarity=0.339 Sum_probs=202.8
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
+|+..+.||.|+||.||+|+.+ +++.||+|.+..... .....+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788999999999999999765 688999999875332 22445788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++++|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999665 4588999999999999999999999 99999999999999999999999999987665432
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......++..|+|||.+.+..++.++|+||+|+++|+|++|+.||...... ................
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~----- 221 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--------IRDQIRAKQETADVLY----- 221 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--------HHHHHHHHhccccccC-----
Confidence 223456788999999999888999999999999999999999998643221 0111111111111111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCH--HHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNM--QIVC 958 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~--~evl 958 (964)
....+..+.+++.+||+.||++||++ +|++
T Consensus 222 -~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 222 -PATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -cccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 12234678889999999999999999 7665
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=304.84 Aligned_cols=267 Identities=21% Similarity=0.276 Sum_probs=196.1
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+..+|...+.||+|+||.||+|.. .+++.||+|.+..... ......+.+|+.+++.++|+||+++++++..++..++|
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 346799999999999999999965 4688999999864322 22234677899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+. +++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++.....
T Consensus 82 ~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 82 FEYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred Eeccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 99996 68877775433 3477888899999999999999999 9999999999999999999999999999765433
Q ss_pred CCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCC--------CCCCCChhHHH----
Q 037111 846 SSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS--------SLPGANMNEAI---- 912 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~--------~~~~~~~~~~~---- 912 (964)
........+++.|+|||.+.+. .++.++|||||||++|||++|+.||+........ ..+........
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 157 SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 3333344578899999998754 5788999999999999999999998643221000 00000000000
Q ss_pred ---HhhhccCCCCCccc-cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 ---DHMFDARLPPPWLE-VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ---~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+..... .........+.+++.+|+..||++|||++|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000000 000011345778889999999999999999874
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=304.83 Aligned_cols=246 Identities=24% Similarity=0.407 Sum_probs=197.8
Q ss_pred cccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEecc
Q 037111 692 DESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLE 770 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (964)
+....||+|+||.||+|... +++.||+|.+.... ......+.+|+.+++.++||||+++++++..++..++||||++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc--cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 33456999999999999654 68999999986432 2334668899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcc
Q 037111 771 RGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850 (964)
Q Consensus 771 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 850 (964)
+++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++...........
T Consensus 102 ~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 175 (297)
T cd06659 102 GGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 175 (297)
T ss_pred CCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccccccc
Confidence 9999998754 3478999999999999999999999 999999999999999999999999999876554433334
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchH
Q 037111 851 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE 930 (964)
Q Consensus 851 ~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (964)
...+++.|+|||.+.+..++.++|||||||++|||++|+.||..... .+....+.....+.. ....
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~---~~~~ 241 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-----------VQAMKRLRDSPPPKL---KNAH 241 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHhccCCCCc---cccC
Confidence 45688999999999988899999999999999999999999853221 122222211111110 1112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 931 DKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 931 ~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+.+++.+||+.+|++||+++++++
T Consensus 242 ~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 242 KISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 23345778889999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=296.88 Aligned_cols=251 Identities=23% Similarity=0.407 Sum_probs=208.9
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||.|+||.||++... +++.||+|++............+.+|++.++.++|||++++++.+..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4788899999999999999764 688999999876544445667889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 769 LERGSLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 769 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
+++++|.+++.... ...+++..+..++.++++|++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997643 45689999999999999999999999 99999999999999999999999999998765544
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.......|++.|+|||...+..++.++||||+|+++|+|++|+.||+... ..+..........++.
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~--- 223 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----------LLELALKILKGQYPPI--- 223 (258)
T ss_pred ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----------HHHHHHHHhcCCCCCC---
Confidence 33344568889999999988889999999999999999999999975322 2233333333322221
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||..+|++||++.++++
T Consensus 224 --~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 224 --PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1133456788899999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=306.39 Aligned_cols=257 Identities=26% Similarity=0.337 Sum_probs=197.9
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 763 (964)
..++|++.+.||+|+||.||+|..+ +|+.||+|+++...........+.+|+.++++++|+||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 3568999999999999999999764 689999999864333333334567899999999999999999998765 5689
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+.+ +|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 85 lv~e~~~~-~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEEecCCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 99999975 8988886543 4589999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc-----
Q 037111 844 PDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD----- 917 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 917 (964)
..........+++.|+|||.+.+ ..++.++||||+||++|||++|+.||...... +....+..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-----------~~~~~~~~~~~~~ 228 (309)
T cd07845 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-----------EQLDLIIQLLGTP 228 (309)
T ss_pred CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHHHhcCCC
Confidence 54333334456788999999865 45789999999999999999999998633221 11111000
Q ss_pred --------------c--CCCC---CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 --------------A--RLPP---PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 --------------~--~~~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ..+. .............+.+++.+|+++||++|||++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 229 NESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred ChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 0000 0000000112456778999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=286.06 Aligned_cols=246 Identities=22% Similarity=0.281 Sum_probs=204.1
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
...++|+..++||+|.||.|-.++-+ +++.||+|++++.. ......+.-..|-++++..+||.+..+--.|+..+++|
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence 35678999999999999999999654 78999999987642 23334456678999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+.||.|.-++.+. ..+++...+.+-..|+.||.|||+. +||.||+|.+|.++|+||++||+|||+++..-
T Consensus 245 FVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc
Confidence 999999999999988653 4488888899999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..+...++.+|||.|.|||++....|..++|.|.+||++|||++|+.||... +.+...+-+..+.+.-|
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~-----------dh~kLFeLIl~ed~kFP 388 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK-----------DHEKLFELILMEDLKFP 388 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc-----------chhHHHHHHHhhhccCC
Confidence 6667778899999999999999999999999999999999999999998532 22334444444333322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCC
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPN 953 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs 953 (964)
.....+...++...+.+||.+|..
T Consensus 389 ------r~ls~eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 389 ------RTLSPEAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred ------ccCCHHHHHHHHHHhhcChHhhcC
Confidence 122233456667889999999973
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-34 Score=276.49 Aligned_cols=253 Identities=23% Similarity=0.383 Sum_probs=197.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhC-CCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTG-VRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++.+...-||.|+.|.||+++.+ +|...|||.+... +..+.-+.++..+.++.. -++|+||+.+|||..+...++.
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt-~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic 169 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT-GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC 169 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc-CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence 445666777999999999999776 5788999999864 444455677777777544 4599999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
||.|.. -...++ .....++++..+-++...++.||.||.+++ +|+|||+||+|||+|+.|++|+||||++..+-+.
T Consensus 170 MelMs~-C~ekLl-krik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 170 MELMST-CAEKLL-KRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHHH-HHHHHH-HHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc
Confidence 999843 344444 445566888888899999999999999886 9999999999999999999999999999776544
Q ss_pred CCCccccccccccccccccccC---CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 846 SSNWSELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~---~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.. .+...|-+.|||||.+.-. .|+.++||||||+.++|+.||+.||..-. ..-+.+.++.... ||
T Consensus 246 kA-htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~----------tdFe~ltkvln~e-PP 313 (391)
T KOG0983|consen 246 KA-HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK----------TDFEVLTKVLNEE-PP 313 (391)
T ss_pred cc-cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC----------ccHHHHHHHHhcC-CC
Confidence 33 2345788999999998743 58899999999999999999999975211 1125555555532 22
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
... ........+.+++..|+.+|+.+||...++++
T Consensus 314 ~L~--~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 314 LLP--GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CCC--cccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 211 11225667888899999999999999998875
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=300.62 Aligned_cols=252 Identities=23% Similarity=0.379 Sum_probs=193.7
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHH-HhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKA-LTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+.+ +|+.||+|++...... .....+..|+.. ++..+||||+++++++..++..++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS-QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc-HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 36889999999999999999765 6899999998753322 223455566665 66678999999999999999999999
Q ss_pred EeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||++ |+|.+++... ....+++..+..++.|++.|++|||++. +++||||||+||+++.++.+||+|||.+.....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9997 5898887642 2346899999999999999999999753 799999999999999999999999999976543
Q ss_pred CCCCcccccccccccccccccc----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 DSSNWSELAGTYGYVAPELAYT----MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~----~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||..... ..+..........
T Consensus 157 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----------~~~~~~~~~~~~~ 225 (283)
T cd06617 157 SVA-KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT----------PFQQLKQVVEEPS 225 (283)
T ss_pred ccc-cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc----------CHHHHHHHHhcCC
Confidence 221 123467889999998865 4568899999999999999999999853211 0111222222111
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+.. .....+.++.+++.+||..+|++||++.++++
T Consensus 226 ~~~----~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 PQL----PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCC----CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 110 01123456888999999999999999999975
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=329.19 Aligned_cols=255 Identities=27% Similarity=0.450 Sum_probs=207.5
Q ss_pred hcccccceeecCCceeEEEEEeC----C----CCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP----S----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA 759 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (964)
++.++.+.+|+|+||.||+|... . ...||||.++..... ...+.+..|+++|+.+ +||||+.++|+|..+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 34455669999999999999643 1 456999999875544 6678999999999998 599999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC------------C--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE
Q 037111 760 RHSFLVYEYLERGSLARILSSET------------A--TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL 825 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill 825 (964)
+..++|+||+..|+|.+|++... . ..++..+.+.++.|||.|++||++. ++||||+.++||++
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEe
Confidence 99999999999999999997654 0 1378889999999999999999999 99999999999999
Q ss_pred CCCCceEEeccCcccccCCCCCCc-cccc--cccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 826 DFEYEAHVSDFGTAKLLKPDSSNW-SELA--GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 826 ~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~--g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
.++..+||+|||+|+......... .... -+..|||||.+....|+.++|||||||++||++| |..||.
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp-------- 523 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYP-------- 523 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCC--------
Confidence 999999999999999765544432 2222 2457999999999999999999999999999998 778853
Q ss_pred CCCCCC-hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 902 SLPGAN-MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 902 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
+.. ..+..+.+.++.... .+..+..+++++|..||+.+|++||++.++++.++.
T Consensus 524 ---~~~~~~~l~~~l~~G~r~~-----~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 524 ---GIPPTEELLEFLKEGNRME-----QPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred ---CCCcHHHHHHHHhcCCCCC-----CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 322 233444333333221 224567789999999999999999999999998763
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=295.20 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=205.7
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|++.+.||+|+||.||++.. .+++.||+|.+...........++.+|+.++++++||||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 478889999999999999965 4788999999875444445567788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 769 LERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 769 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
+++++|.+++... ....+++..+..++.|+++|++|||+. +++||||+|+||+++.++.+|++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998662 234588999999999999999999999 9999999999999999999999999999776544
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......+++.|+|||.+.+..++.++|+||+|+++|+|++|+.||.... ..+..........++.
T Consensus 157 -~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~--- 221 (256)
T cd08530 157 -MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS-----------MQDLRYKVQRGKYPPI--- 221 (256)
T ss_pred -CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHhcCCCCCC---
Confidence 2223467889999999999889999999999999999999999985322 1222222222222221
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......++.+++.+|++.+|++||++.++++
T Consensus 222 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 222 --PPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred --chhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1245566889999999999999999999975
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=293.04 Aligned_cols=251 Identities=25% Similarity=0.411 Sum_probs=206.4
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSFLVY 766 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 766 (964)
+|+..+.||+|++|.||+|... +++.|++|++............+.+|+..+++++||||+++++++... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999766 788999999875544345567889999999999999999999999988 8999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++++|.+++.... .+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999997654 689999999999999999999998 99999999999999999999999999998766543
Q ss_pred C--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 847 S--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 847 ~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......++..|+|||...+..++.++||||||+++|+|++|+.||..... ..............+.
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~- 224 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----------PMAALYKIGSSGEPPE- 224 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----------hHHHHHhccccCCCcC-
Confidence 3 13345688899999999988899999999999999999999999864331 1111122211111111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+|+..+|++||++.++++
T Consensus 225 ---~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 225 ---IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ---CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11233567888999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=310.22 Aligned_cols=264 Identities=22% Similarity=0.325 Sum_probs=198.2
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------ 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 759 (964)
..++|+..+.||+|+||.||+|+.. +++.||+|++............+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999654 789999999865434444456778899999999999999999998643
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
...|+||||+.+ +|.+++... ++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 357999999965 888887532 78889999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------CCCCCCChhH--
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------SSLPGANMNE-- 910 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------~~~~~~~~~~-- 910 (964)
+....... .....+++.|+|||.+.+..++.++||||+||++|+|++|+.||........ ...+......
T Consensus 166 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 166 RTAGTSFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred eeCCCCCC-CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 86543322 2334678899999999999999999999999999999999999853321000 0000000000
Q ss_pred --HHHhhhccCC---------------CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 911 --AIDHMFDARL---------------PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 911 --~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+. -+.............+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000000000 000000001123456789999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=300.24 Aligned_cols=247 Identities=26% Similarity=0.442 Sum_probs=196.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
..|+..+.||+|+||.||+|... +++.||+|++.... ........+.+|+.+++.++||||+++++++.+++..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 35888899999999999999764 68899999986432 23334467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++ |++.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 9997 58877775433 3589999999999999999999999 9999999999999999999999999998765433
Q ss_pred CCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 847 SNWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
....+++.|+|||.+. ...++.++||||||+++|||++|+.||..... ............+ .
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-----------~~~~~~~~~~~~~-~ 233 (307)
T cd06607 169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----------MSALYHIAQNDSP-T 233 (307)
T ss_pred ---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH-----------HHHHHHHhcCCCC-C
Confidence 2346788999999874 45688999999999999999999999753221 1111111111111 1
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........+.+++.+||+.+|++||++.+|+.
T Consensus 234 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 234 ---LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred ---CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 111234566889999999999999999999976
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=302.23 Aligned_cols=255 Identities=24% Similarity=0.362 Sum_probs=195.9
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||++... +++.||+|++..... ......+.+|+.++.++. ||||+++++++..++..+++|
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD-EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC-hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 35666788999999999999654 688999999864332 244567889999999986 999999999999999999999
Q ss_pred EeccCCCHHHHh---hhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 767 EYLERGSLARIL---SSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
||+.. ++.++. .......+++..+..++.|++.|++|||+.. +++||||||+||+++.++.++|+|||+++...
T Consensus 83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 99865 655543 3333456899999999999999999999632 89999999999999999999999999997654
Q ss_pred CCCCCccccccccccccccccccC---CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
..... ....|++.|+|||.+.+. .++.++||||+||++|||++|+.||.... ...+.+.+......
T Consensus 160 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----------~~~~~~~~~~~~~~ 228 (288)
T cd06616 160 DSIAK-TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----------SVFDQLTQVVKGDP 228 (288)
T ss_pred cCCcc-ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----------hHHHHHhhhcCCCC
Confidence 33221 233578899999998876 68899999999999999999999985321 11122222222111
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+ ............++.+++.+||+++|++||++++|++
T Consensus 229 ~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 229 P-ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred C-cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 1111111235567889999999999999999999876
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=292.42 Aligned_cols=249 Identities=27% Similarity=0.441 Sum_probs=205.2
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|++|.||+|..+ +++.||+|.+............+.+|++++++++|||++++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999655 678999999976544445567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++++|.+++... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999999999655 4589999999999999999999999 9999999999999999999999999999877655443
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ............+..
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~----- 219 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-----------MAALFRIVQDDHPPL----- 219 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-----------HHHHHHHhccCCCCC-----
Confidence 3455688899999999888889999999999999999999999753221 111111111111111
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+|+..+|++||++.+++.
T Consensus 220 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 220 PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1123456778889999999999999999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=304.83 Aligned_cols=263 Identities=18% Similarity=0.202 Sum_probs=193.5
Q ss_pred ccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 693 ESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
+.+.+|.|+++.||++.. +++.||||++............+.+|+..+++++||||+++++++.+.+..+++|||+++|
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 344455555655666554 6899999998764344555678999999999999999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC-----
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS----- 847 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~----- 847 (964)
+|.+++.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+|++|||.+........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 999999876555688999999999999999999999 999999999999999999999999998865533221
Q ss_pred --Ccccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC------CCC----CCChhHHHH
Q 037111 848 --NWSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS------SLP----GANMNEAID 913 (964)
Q Consensus 848 --~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~------~~~----~~~~~~~~~ 913 (964)
......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......... ..+ .........
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence 1123346778999999875 35888999999999999999999998643221000 000 000000000
Q ss_pred h-------hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 H-------MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ....................++.+++.+||..||++|||++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0 000000000011112233456788999999999999999999975
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=293.69 Aligned_cols=244 Identities=27% Similarity=0.347 Sum_probs=197.0
Q ss_pred eecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCH
Q 037111 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL 774 (964)
Q Consensus 697 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 774 (964)
||.|+||.||+|+.. +++.||+|.+..... .....+.+.+|+.+++.++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999765 588999999865332 233456789999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccc
Q 037111 775 ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG 854 (964)
Q Consensus 775 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g 854 (964)
.+++.... .+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++++|||.+....... ......+
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~ 154 (262)
T cd05572 81 WTILRDRG--LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCG 154 (262)
T ss_pred HHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccC
Confidence 99996543 478899999999999999999998 99999999999999999999999999998765432 2223467
Q ss_pred ccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHH
Q 037111 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLK 934 (964)
Q Consensus 855 ~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (964)
++.|+|||.+.+..++.++|+||+|+++|+|++|..||..... +..+....+......... ......
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~~----~~~~~~ 221 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE---------DPMEIYNDILKGNGKLEF----PNYIDK 221 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC---------CHHHHHHHHhccCCCCCC----CcccCH
Confidence 8899999999888899999999999999999999999864321 122333333321111111 111245
Q ss_pred HHHHHHHHccCCCCCCCCC-----HHHHHH
Q 037111 935 SIIEVALSCVDANPERRPN-----MQIVCK 959 (964)
Q Consensus 935 ~l~~li~~cl~~dp~~RPs-----~~evl~ 959 (964)
.+.+++.+||+.+|++||+ ++|+++
T Consensus 222 ~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 222 AAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 6889999999999999999 777765
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=290.85 Aligned_cols=249 Identities=29% Similarity=0.480 Sum_probs=203.0
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|++|.||++..+ +++.|++|++..... .....+.+|++.+++++||+++++++++..+...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 4778899999999999999765 688999999865332 3457889999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++++|.+++.... ..+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 79 ~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 79 CSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 99999999997653 4589999999999999999999998 999999999999999999999999999987665432
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ............+ ... .
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~-~~~--~ 219 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-----------MKALFKIATNGPP-GLR--N 219 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-----------HHHHHHHHhcCCC-CcC--c
Confidence 3345688899999999888899999999999999999999999753221 1111111111111 100 0
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||+.||++|||+.++++
T Consensus 220 ~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1112456888999999999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=297.73 Aligned_cols=246 Identities=24% Similarity=0.291 Sum_probs=193.9
Q ss_pred eecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCH
Q 037111 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL 774 (964)
Q Consensus 697 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 774 (964)
||+|+||+||++..+ +|+.||+|.+..... .......+..|++++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999654 688999999864321 122344567899999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccc
Q 037111 775 ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG 854 (964)
Q Consensus 775 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g 854 (964)
.+++.......+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+...... .......+
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~ 156 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRAG 156 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC-CccccccC
Confidence 9999776655689999999999999999999999 9999999999999999999999999998765432 22234467
Q ss_pred ccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHH
Q 037111 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLK 934 (964)
Q Consensus 855 ~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (964)
+..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ....+........... .......
T Consensus 157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~------~~~~~~~ 223 (277)
T cd05577 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-------VEKEELKRRTLEMAVE------YPDKFSP 223 (277)
T ss_pred CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-------ccHHHHHhcccccccc------CCccCCH
Confidence 88999999998888999999999999999999999998532220 0111111111111111 1112345
Q ss_pred HHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 935 SIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 935 ~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.+.+++.+||+.+|++|| ++.++++
T Consensus 224 ~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 224 EAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 578888999999999999 6666653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=298.90 Aligned_cols=265 Identities=21% Similarity=0.340 Sum_probs=198.4
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..+.||+|++|.||+|+.+ +|+.||||++..... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 4888999999999999999775 688999999875332 23345677899999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 769 LERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
+++ +|.+++.... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||.+........
T Consensus 80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 985 8999886543 34589999999999999999999999 999999999999999999999999999976544333
Q ss_pred CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------CCCCCCChhHHHHhh--hc
Q 037111 848 NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------SSLPGANMNEAIDHM--FD 917 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------~~~~~~~~~~~~~~~--~~ 917 (964)
......+++.|++||.+.+. .++.++||||+||++|+|++|+.||........ ...+....-+.+... +.
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence 33344578899999988654 478899999999999999999999863321100 000000000000000 00
Q ss_pred cCCCCCc---cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPW---LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+... ...........+.+++.+|++.||++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0111000 00011123456788999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=303.15 Aligned_cols=261 Identities=25% Similarity=0.376 Sum_probs=199.3
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc----
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR---- 760 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 760 (964)
...++|++.+.||+|+||.||+|..+ +|+.||+|+++...........+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999765 5889999998754433344456788999999999999999999987654
Q ss_pred ------eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 761 ------HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 761 ------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
..++|+||+++ ++.+++... ...+++..+..++.|++.||+|||+. +|+||||+|+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeC
Confidence 78999999986 787777554 34589999999999999999999999 99999999999999999999999
Q ss_pred ccCcccccCCCCC-Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 835 DFGTAKLLKPDSS-NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 835 Dfg~a~~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
|||.+........ ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||....... .-+.+
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~--------~~~~~ 230 (302)
T cd07864 159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA--------QLELI 230 (302)
T ss_pred cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHH
Confidence 9999976654332 1223346778999998764 357889999999999999999999986432210 00111
Q ss_pred HhhhccCCCC---------------------CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFDARLPP---------------------PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+......+. ..........+..+.+++.+||+.||++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111110000 0000011123466889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=297.14 Aligned_cols=253 Identities=25% Similarity=0.384 Sum_probs=196.9
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC---CCCceeeEEeeeecCce-----
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV---RHRNIVKFYGFCSHARH----- 761 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 761 (964)
|++.+.||+|+||.||+|+.+ +++.||+|++............+.+|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999876 489999999875443333345566777766555 69999999999988776
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.+++|||+.+ +|.+++.......+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||.+..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 9999999975 899998765555689999999999999999999999 999999999999999999999999999977
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc----
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---- 917 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---- 917 (964)
...... .....++..|+|||.+.+..++.++||||||+++|||++|+.||...... +...++.+
T Consensus 157 ~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 224 (287)
T cd07838 157 YSFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-----------DQLDKIFDVIGL 224 (287)
T ss_pred ccCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-----------HHHHHHHHHcCC
Confidence 643322 22335788899999999989999999999999999999999998643221 11111110
Q ss_pred -----------------cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 -----------------ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 -----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.............+....+.+++.+||+.||++||++++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 225 PSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000011112234466788999999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=295.73 Aligned_cols=252 Identities=23% Similarity=0.272 Sum_probs=202.1
Q ss_pred HHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
...+.|..-++||+|+||.||-++. .+|+.||.|++.+..- ........+.|-.++.+++.+.||.+--+|+..+.++
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 3456788889999999999999954 4799999998754321 2222345778999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+|+..|.||+|.-+|...+...++++.++.++.+|+.||++||.. +||.||+||+|||+|+.|+++|+|.|+|..+.
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 999999999999999887777899999999999999999999999 99999999999999999999999999999877
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.... ....+||.+|||||++..+.|+...|.||+||++|||+.|+.||..... ....+.+++.+... + .
T Consensus 339 ~g~~-~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke--------Kvk~eEvdrr~~~~-~-~ 407 (591)
T KOG0986|consen 339 EGKP-IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE--------KVKREEVDRRTLED-P-E 407 (591)
T ss_pred CCCc-cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh--------hhhHHHHHHHHhcc-h-h
Confidence 5544 3455899999999999999999999999999999999999999863222 11122233322110 1 1
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
...+...++...+....+.+||++|.-.
T Consensus 408 ---ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 408 ---EYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred ---hcccccCHHHHHHHHHHHccCHHHhccC
Confidence 1112333445555568889999999754
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=299.61 Aligned_cols=259 Identities=20% Similarity=0.277 Sum_probs=185.7
Q ss_pred hcccccceeecCCceeEEEEEeCCC----CeEEEEEeccccCchhhH---------HHHHHHHHHHhCCCCCceeeEEee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSG----DTVAVKKLHSFTGETTHQ---------KEFLSEIKALTGVRHRNIVKFYGF 755 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~---------~~~~~E~~~l~~l~h~niv~l~~~ 755 (964)
.+|++.+.||+|+||.||+|...++ ..+|+|+........... .....+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 4799999999999999999976543 455666532211111000 112233445667789999999998
Q ss_pred eecCc----eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCce
Q 037111 756 CSHAR----HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA 831 (964)
Q Consensus 756 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~ 831 (964)
+.... ..++++|++.. ++.+.+... ...++..+..++.|++.|++|||+. +|+||||||+||+++.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcE
Confidence 76543 34788887754 777776543 2256788899999999999999999 99999999999999999999
Q ss_pred EEeccCcccccCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC
Q 037111 832 HVSDFGTAKLLKPDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~ 904 (964)
+|+|||+|+....... ......||+.|+|||+..+..++.++|||||||++|||++|+.||........ ..
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~--~~ 243 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN--LI 243 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH--HH
Confidence 9999999986643221 11234689999999999999999999999999999999999999864322110 00
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.....+...++....... ..+++.+.+++..|+..+|++||+++++++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 244 HAAKCDFIKRLHEGKIKI-------KNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHhHHHHHHHhhhhhhcc-------CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 000111222222222221 123466888999999999999999999998863
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=302.28 Aligned_cols=261 Identities=20% Similarity=0.286 Sum_probs=192.6
Q ss_pred eeecC--CceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 696 CIGRG--GYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 696 ~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.||+| +||+||++.. .+|+.||+|++..........+.+.+|+.+++.++||||++++++|..++..++||||+.+|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 45666 9999999976 47999999998754434445578889999999999999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc---
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW--- 849 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~--- 849 (964)
++.+++.......+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+..........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 999999776555688999999999999999999998 99999999999999999999999998654332211110
Q ss_pred ----cccccccccccccccccC--CCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------CCC-CC--CChhHHHH
Q 037111 850 ----SELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------SSL-PG--ANMNEAID 913 (964)
Q Consensus 850 ----~~~~g~~~y~aPE~~~~~--~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------~~~-~~--~~~~~~~~ 913 (964)
....++..|+|||++.+. .++.++||||+||++|||++|+.||........ ... +. ........
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhh
Confidence 112345679999998764 478999999999999999999999864321100 000 00 00000000
Q ss_pred h---------------hhcc----CCC-CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 H---------------MFDA----RLP-PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~---------------~~~~----~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .... ... ..............+.+++.+||..||++|||++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 0000 000 00011112345667899999999999999999999975
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=295.67 Aligned_cols=247 Identities=24% Similarity=0.384 Sum_probs=199.6
Q ss_pred eecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCH
Q 037111 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL 774 (964)
Q Consensus 697 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 774 (964)
||+|+||.||++... +|+.||+|.+..... .......+.+|++++++++||||+++++.+..+...|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999776 489999999864322 223456788999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC-------
Q 037111 775 ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS------- 847 (964)
Q Consensus 775 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~------- 847 (964)
.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++++|||++........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99997654 589999999999999999999999 999999999999999999999999999875543311
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......++..|+|||...+..++.++||||||+++|++++|+.||.... ..+............+..
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~~~- 223 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-----------PEEIFQNILNGKIEWPED- 223 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHhcCCcCCCcc-
Confidence 2234457889999999988889999999999999999999999975322 223333333333322211
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
......+.+++.+||+.+|++|||+.+|.+.|+.
T Consensus 224 ---~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 224 ---VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred ---ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 1124667889999999999999999777666653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=300.70 Aligned_cols=265 Identities=23% Similarity=0.340 Sum_probs=194.2
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-----
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----- 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 760 (964)
..++|+..+.||+|+||.||+|... +++.||||++............+.+|+.++++++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 4567999999999999999999764 6889999998654333333345678999999999999999999986654
Q ss_pred ---eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccC
Q 037111 761 ---HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 761 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
..++||||+.+ ++.+++.... ..+++..+..++.|++.|++|||++ +++|+||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence 45999999975 8888886543 3589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC----ccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCcccccc-------------
Q 037111 838 TAKLLKPDSSN----WSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLS------------- 899 (964)
Q Consensus 838 ~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~------------- 899 (964)
.+......... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99765433221 12345678899999886643 7889999999999999999999985432110
Q ss_pred CCCCCCCChhHHHHhhhccCCCCCccccc-----hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 900 DSSLPGANMNEAIDHMFDARLPPPWLEVG-----VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...++.......... ...+....... .......+.+++.+||+.||++|||++++++
T Consensus 245 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 245 PEVWPGVDKLELFKK---MELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhhcccccchhhhhh---ccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 000000000000000 00000000000 0001234678999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=298.46 Aligned_cols=244 Identities=26% Similarity=0.409 Sum_probs=195.5
Q ss_pred cceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 694 SFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
...||+|+||.||+|.. .+++.||||++... .......+.+|+.+++.++|+|++++++++...+..++||||++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 35699999999999976 47889999987532 2334567889999999999999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccc
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 852 (964)
+|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||.+.............
T Consensus 103 ~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~ 176 (292)
T cd06657 103 ALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 176 (292)
T ss_pred cHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccccccc
Confidence 999987432 478899999999999999999999 99999999999999999999999999987655433333345
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHH
Q 037111 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDK 932 (964)
Q Consensus 853 ~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (964)
.+++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... .+.... .....++... .....
T Consensus 177 ~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~-----------~~~~~~-~~~~~~~~~~--~~~~~ 242 (292)
T cd06657 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----------LKAMKM-IRDNLPPKLK--NLHKV 242 (292)
T ss_pred ccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHH-HHhhCCcccC--CcccC
Confidence 688999999999888899999999999999999999999752111 111111 1111111110 11123
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 933 LKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 933 ~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.+++.+||..+|.+||++.++++
T Consensus 243 ~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 243 SPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 445778889999999999999999876
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=297.67 Aligned_cols=264 Identities=22% Similarity=0.304 Sum_probs=201.9
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|+..+.||+|++|.||+|..+ +++.||+|++............+..|+.++++++||||+++++++.++...++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567788999999999999764 6889999998754444344567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 849 (964)
++ ++.+++.... ..+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++|+|||.+..........
T Consensus 81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~ 155 (283)
T cd05118 81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPY 155 (283)
T ss_pred CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccc
Confidence 75 8988886643 4589999999999999999999999 99999999999999999999999999998776544233
Q ss_pred cccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-----CCCC---CChhHHHH---h--h
Q 037111 850 SELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-----SLPG---ANMNEAID---H--M 915 (964)
Q Consensus 850 ~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-----~~~~---~~~~~~~~---~--~ 915 (964)
....++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......... .... ........ . .
T Consensus 156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05118 156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKF 235 (283)
T ss_pred cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhh
Confidence 345678889999998876 7899999999999999999999998533221000 0000 00000000 0 0
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...................++.+++.+||++||.+||++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 236 SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000000011122345677889999999999999999999975
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-32 Score=297.41 Aligned_cols=247 Identities=25% Similarity=0.419 Sum_probs=196.7
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.|+..+.||+|+||.||+|+.. ++..||+|++.... ........+..|++++++++|||++++++++.++...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3677888999999999999754 68899999986432 223344678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++ ++.+++... ..++++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++++|||++......
T Consensus 106 ~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (317)
T cd06635 106 YCLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-- 178 (317)
T ss_pred CCCC-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc--
Confidence 9975 888877543 34588999999999999999999999 9999999999999999999999999998754432
Q ss_pred Cccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 NWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
....+++.|+|||.+. .+.++.++|||||||++|||++|+.||... ........+.....+..
T Consensus 179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~- 244 (317)
T cd06635 179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-----------NAMSALYHIAQNESPTL- 244 (317)
T ss_pred --ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc-----------cHHHHHHHHHhccCCCC-
Confidence 2346788999999974 456889999999999999999999997521 11222222222222211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
........+.+++.+||+.+|++||++.+|++.
T Consensus 245 ---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 245 ---QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred ---CCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 112344567888999999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=292.38 Aligned_cols=246 Identities=22% Similarity=0.294 Sum_probs=191.1
Q ss_pred ceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHH-HhCCCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKA-LTGVRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|... +++.||+|.+..... .......+..|..+ ....+|||++++++++..++..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999664 688999999864321 11222334455544 4455899999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
++|.+++.... .+++..+..++.|+++||.|||+. +++||||+|+||+++.++.++++|||++..... ...
T Consensus 82 ~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~ 152 (260)
T cd05611 82 GDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKK 152 (260)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----ccc
Confidence 99999996543 478899999999999999999999 999999999999999999999999999875433 223
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (964)
..+++.|+|||.+.+..++.++||||+|+++|||++|..||.... .......+.......+ ......
T Consensus 153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~--~~~~~~ 219 (260)
T cd05611 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET-----------PDAVFDNILSRRINWP--EEVKEF 219 (260)
T ss_pred CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHHhcccCCC--Cccccc
Confidence 467889999999988888999999999999999999999985221 1222233222222111 111123
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 932 KLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 932 ~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+...+.+++.+||..+|++||++.++.+.|+
T Consensus 220 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 220 CSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred CCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 4566889999999999999998876666654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=302.58 Aligned_cols=266 Identities=20% Similarity=0.298 Sum_probs=196.0
Q ss_pred cccccceeecCCceeEEEEEeC---CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP---SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSF 763 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 763 (964)
+|+..+.||+|+||.||+|..+ +++.||+|.+.... ........+.+|+.++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999765 47899999987532 1122235677899999999999999999999988 7899
Q ss_pred EEEEeccCCCHHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC----CCceEEecc
Q 037111 764 LVYEYLERGSLARILSSE---TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF----EYEAHVSDF 836 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~----~~~~kl~Df 836 (964)
+||||+++ ++.+++... ....+++..+..++.|++.|++|||+. +++||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 777776532 223588899999999999999999999 9999999999999999 899999999
Q ss_pred CcccccCCCCC---CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCC--ChhH
Q 037111 837 GTAKLLKPDSS---NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGA--NMNE 910 (964)
Q Consensus 837 g~a~~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~--~~~~ 910 (964)
|++........ ......+++.|+|||.+.+. .++.++||||||+++|+|++|+.||...........+.. ...+
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986644322 12344678899999987764 578999999999999999999999864433221000000 0000
Q ss_pred HHHhhh--------------------ccCCCCCccccchH-------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 911 AIDHMF--------------------DARLPPPWLEVGVE-------DKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 911 ~~~~~~--------------------~~~~~~~~~~~~~~-------~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+..+- +............. ....++.+++.+|+++||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000 00000000000000 23346888999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=295.91 Aligned_cols=263 Identities=24% Similarity=0.385 Sum_probs=197.8
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeEEEEE
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSFLVYE 767 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 767 (964)
|++.+.||+|+||.||+|+.. +++.||+|++............+.+|+.++++++|||++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999765 588999999976543344456788999999999999999999999888 89999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++ +|.+++.... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++.++++|||.+........
T Consensus 81 ~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 9975 9999886543 4589999999999999999999999 999999999999999999999999999986654432
Q ss_pred -Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------------CCCCCCChhHHH
Q 037111 848 -NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------------SSLPGANMNEAI 912 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------------~~~~~~~~~~~~ 912 (964)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||+....... ..++........
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWF 235 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhh
Confidence 1233456788999998765 4578999999999999999999999864322100 000000000000
Q ss_pred HhhhccCCC-CCccccchHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFDARLP-PPWLEVGVED-KLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~~~~~-~~~~~~~~~~-~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ....... +......... +...+.+++.+||+.+|++||++.++++
T Consensus 236 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 236 E-NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred h-hccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0 0000000 0000000111 2567889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=331.80 Aligned_cols=252 Identities=28% Similarity=0.440 Sum_probs=204.4
Q ss_pred hcccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
-+++....||.|.||.||.|. ..+|.-.|+|-++-........+.+.+|+.++..++|||+|+++|+-.+.+..++.||
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 467888899999999999995 4578889999887655555556788899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||++|+|.+.+..... .++.....+..|++.|++|||++ |||||||||.||+++.+|.+|.+|||.|..+.....
T Consensus 1315 yC~~GsLa~ll~~gri--~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRI--EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred HhccCcHHHHHHhcch--hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence 9999999999965433 55666667889999999999999 999999999999999999999999999988765532
Q ss_pred C----ccccccccccccccccccC---CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 848 N----WSELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 848 ~----~~~~~g~~~y~aPE~~~~~---~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
. .....||+.|||||++.+. +...+.||||+||++.||+||+.||...+. .-..+.++-.+..
T Consensus 1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn----------e~aIMy~V~~gh~ 1459 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN----------EWAIMYHVAAGHK 1459 (1509)
T ss_pred cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc----------hhHHHhHHhccCC
Confidence 2 2356799999999999864 356689999999999999999999864332 1133334333333
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
|+- +.....+-.+++..|+..||.+|.++.|+++.
T Consensus 1460 Pq~-----P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1460 PQI-----PERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred CCC-----chhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 322 12244455677779999999999999988763
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=293.62 Aligned_cols=243 Identities=22% Similarity=0.251 Sum_probs=185.7
Q ss_pred eeecCCceeEEEEEeC-CCCeEEEEEeccccCc-hhhHHHHHHHHHHH---hCCCCCceeeEEeeeecCceeEEEEEecc
Q 037111 696 CIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE-TTHQKEFLSEIKAL---TGVRHRNIVKFYGFCSHARHSFLVYEYLE 770 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (964)
.||+|+||.||++... +++.||+|.+...... ......+.+|..++ ...+||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999764 6889999988653222 12223334444433 34479999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcc
Q 037111 771 RGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850 (964)
Q Consensus 771 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 850 (964)
+|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||++....... ..
T Consensus 81 ~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~~ 153 (279)
T cd05633 81 GGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PH 153 (279)
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--cc
Confidence 999999986543 489999999999999999999999 99999999999999999999999999987554322 22
Q ss_pred ccccccccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccch
Q 037111 851 ELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929 (964)
Q Consensus 851 ~~~g~~~y~aPE~~~-~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (964)
...|++.|+|||.+. +..++.++||||+||++|||++|+.||..... ... ........ ..+.. ..
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--------~~~-~~~~~~~~-~~~~~----~~ 219 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--------KDK-HEIDRMTL-TVNVE----LP 219 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCC--------cCH-HHHHHHhh-cCCcC----Cc
Confidence 346899999999886 45688999999999999999999999863321 111 11111110 11111 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 930 EDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 930 ~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.....++.+++.+|++.||++|| +++++++
T Consensus 220 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 220 DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 22445678888999999999999 5988876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=274.95 Aligned_cols=252 Identities=21% Similarity=0.269 Sum_probs=200.1
Q ss_pred hhccccc-ceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHH-hCCCCCceeeEEeeeec----Cc
Q 037111 688 INNFDES-FCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKAL-TGVRHRNIVKFYGFCSH----AR 760 (964)
Q Consensus 688 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~ 760 (964)
+++|.+. ++||-|-.|.|..+.. .+|+++|+|++.+. ....+|++.- ..-.|||||.++++|++ ..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 4455553 4799999999999854 47999999998642 2344677774 33469999999999865 35
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccC
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFG 837 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg 837 (964)
.+.+|||.|+||.|...++.++...+++.++.+|+.||..|+.|||+. +|.||||||+|+|... +..+|++|||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccc
Confidence 788999999999999999999999999999999999999999999999 9999999999999965 4579999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
+|+..... ....+.+-||.|.|||++....|+...|+||+||++|-|++|.+||....... .....-.++..
T Consensus 210 FAK~t~~~-~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-------ispgMk~rI~~ 281 (400)
T KOG0604|consen 210 FAKETQEP-GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-------ISPGMKRRIRT 281 (400)
T ss_pred cccccCCC-ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-------CChhHHhHhhc
Confidence 99865543 33456678999999999999999999999999999999999999997544411 11123334433
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+.+.-| ...+....+..-++|+.+++.+|.+|.|+.++++
T Consensus 282 gqy~FP--~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 282 GQYEFP--EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred cCccCC--ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 333211 1234556666778888999999999999999874
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=304.78 Aligned_cols=265 Identities=22% Similarity=0.307 Sum_probs=199.0
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----ce
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 761 (964)
.++|+..+.||+|+||+||+|+. .+++.||||.+............+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 35789999999999999999965 4689999999875433333455677899999999999999999988654 35
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+. ++|.+++... ..+++..+..++.|++.|+.|||++ +++||||||+||+++.++.+||+|||++..
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 899999996 6899988644 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-------------CCCC---C
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS-------------DSSL---P 904 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~-------------~~~~---~ 904 (964)
............++..|+|||.+.. ..++.++|||||||++|+|++|+.||....... .... .
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07858 158 TSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR 237 (337)
T ss_pred cCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcC
Confidence 6544333334567889999998765 468899999999999999999999985432100 0000 0
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
........... . ..+.............++.+++.+||+++|++||+++++++.
T Consensus 238 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 238 NEKARRYIRSL-P-YTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred chhhhHHHHhc-C-cccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000000000 0 000000011112345668899999999999999999998853
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=276.50 Aligned_cols=204 Identities=24% Similarity=0.355 Sum_probs=170.6
Q ss_pred HhhcccccceeecCCceeEEEEEeC---CC--CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-Cc
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP---SG--DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-AR 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 760 (964)
....|+.+..||+|.||.||+|..+ +. ..||+|+++.............+|+..++.++||||+.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 4457999999999999999999432 22 279999997543222223456689999999999999999999877 78
Q ss_pred eeEEEEEeccCCCHHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC----CceEE
Q 037111 761 HSFLVYEYLERGSLARILSSE---TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE----YEAHV 833 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~----~~~kl 833 (964)
.+++++||++. +|...++.. ....++...+..|+.||+.|+.|||++ -|+|||+||.||++..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 99999999998 999988642 234688899999999999999999999 79999999999999888 89999
Q ss_pred eccCcccccCCCCCC---ccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 834 SDFGTAKLLKPDSSN---WSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
+|+|+++.+...-.. ...++-|..|.|||.+.+.. ||.+.||||.||++.||+|-++-|.-
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 999999988765332 34567799999999998765 89999999999999999998777643
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=293.36 Aligned_cols=261 Identities=20% Similarity=0.269 Sum_probs=192.6
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecC--ceeEEEE
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHA--RHSFLVY 766 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~ 766 (964)
|+..+.||+|+||.||+|..+ +++.||+|+++....... ......|+.+++++. |||++++++++.+. +..++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 567888999999999999654 688999999875432222 234457888888885 99999999999887 8899999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++ |++.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.+.......
T Consensus 80 e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 80 ELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred ecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 9997 48888886543 3589999999999999999999999 9999999999999999 999999999998664332
Q ss_pred CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC----CCCCCChhHHHHhhhc----
Q 037111 847 SNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS----SLPGANMNEAIDHMFD---- 917 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~---- 917 (964)
. .....+++.|+|||.+.. ..++.++||||+||++|||++|..||......... ...+............
T Consensus 154 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07831 154 P-YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHM 232 (282)
T ss_pred C-cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccc
Confidence 2 223457889999997654 55788999999999999999999998543221000 0000000011001000
Q ss_pred -cCCCCC---ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 -ARLPPP---WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 -~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.. .........+..+.+++.+||+++|++||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 233 NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000 000111234577899999999999999999999975
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=303.64 Aligned_cols=266 Identities=23% Similarity=0.367 Sum_probs=197.6
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC--cee
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA--RHS 762 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 762 (964)
..++|+..+.||+|+||.||+|... +++.||+|++............+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3567899999999999999999765 688999999865333334456677899999999 999999999998653 468
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++||||++ ++|.+++... .+++..+..++.||+.||+|||+. +|+||||+|+||+++.++.+||+|||.+...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999997 4999998654 578889999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCC-----Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccC--------CCCCCCCh
Q 037111 843 KPDSS-----NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD--------SSLPGANM 908 (964)
Q Consensus 843 ~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~--------~~~~~~~~ 908 (964)
..... ......|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||........ ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 43321 1223467889999998765 4578899999999999999999999853221100 00000000
Q ss_pred h----HHHHhhhccCC--CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 909 N----EAIDHMFDARL--PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 909 ~----~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .....+..... ..............++.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 0 00000111000 000001111123566889999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-32 Score=295.06 Aligned_cols=254 Identities=23% Similarity=0.370 Sum_probs=196.1
Q ss_pred HhhcccccceeecCCceeEEEEEeCC-CCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (964)
..++|+..+.||+|+||.||+|..++ ++.||||.++.... .....++..|+.++.+. +||||+++++++.++...++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC-hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 34678999999999999999998764 88999999875322 23345666777766666 59999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
||||+.+ ++.+++.... ..+++..+.+++.|++.|++|||+ . +|+||||+|+||+++.++.+||+|||.+....
T Consensus 92 v~e~~~~-~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 92 CMELMST-CLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred EeeccCc-CHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 9999854 7877775533 368899999999999999999997 5 89999999999999999999999999987654
Q ss_pred CCCCCccccccccccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... ....+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||..... ..+.........
T Consensus 167 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----------~~~~~~~~~~~~ 235 (296)
T cd06618 167 DSKAK-TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT----------EFEVLTKILQEE 235 (296)
T ss_pred CCCcc-cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh----------HHHHHHHHhcCC
Confidence 33222 2335778999999987554 78899999999999999999999853111 112233333322
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
.+... .......++.+++.+||+.||++||++.++++.
T Consensus 236 ~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 236 PPSLP---PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 21110 011234568889999999999999999999753
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=306.24 Aligned_cols=203 Identities=31% Similarity=0.474 Sum_probs=175.9
Q ss_pred cccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------ee
Q 037111 690 NFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------HS 762 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~ 762 (964)
.+...+.||+|+||.||+|+ .++|+.||||.+.... .....+...+|++++++++|||||+++++-+... ..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 46667789999999999998 4589999999987643 4444567789999999999999999999865543 57
Q ss_pred EEEEEeccCCCHHHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC--CCC--ceEEeccC
Q 037111 763 FLVYEYLERGSLARILSS-ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD--FEY--EAHVSDFG 837 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~--~~~--~~kl~Dfg 837 (964)
.+|||||.||||+..+.+ .....+++.+++.+..+++.||.|||++ +||||||||.||++- ++| .-||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 899999999999999976 4556799999999999999999999999 999999999999993 334 36999999
Q ss_pred cccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSS 897 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~ 897 (964)
.|+...+.. .....+||..|.+||.... +.|+..+|.|||||++|+++||..||.....
T Consensus 170 ~Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 170 AARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred ccccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence 999877554 6677899999999999984 7899999999999999999999999975544
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=295.01 Aligned_cols=256 Identities=23% Similarity=0.324 Sum_probs=200.7
Q ss_pred cccccceeecCCceeEEEEEe----CCCCeEEEEEecccc--CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCcee
Q 037111 690 NFDESFCIGRGGYGSVYKAEL----PSGDTVAVKKLHSFT--GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 762 (964)
+|+..+.||+|+||.||+++. .+++.||||.++... ........+..|+.++.++ +||+|+++++++..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 377889999999999999864 357889999986432 1223345688999999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++++|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999998654 3488899999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCCC-ccccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 843 KPDSSN-WSELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 843 ~~~~~~-~~~~~g~~~y~aPE~~~~~~--~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
...... .....++..|+|||...+.. .+.++||||||+++|||++|..||..... .....+....+....
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-------~~~~~~~~~~~~~~~ 228 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-------QNSQSEISRRILKSK 228 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-------cchHHHHHHHHHccC
Confidence 443222 22345788999999987655 78899999999999999999999853211 011122222222222
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.+.+ ......+.+++.+||+.||++|||+.+|.+.|..
T Consensus 229 ~~~~------~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 PPFP------KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred CCCC------cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 2211 1233457788999999999999999988877753
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=302.64 Aligned_cols=262 Identities=22% Similarity=0.356 Sum_probs=201.4
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-----eeE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-----HSF 763 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 763 (964)
+|++.+.||.|++|.||+|+.. +++.||+|++..........+.+.+|+.++++++||||+++++++.... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999765 5889999998764433455578899999999999999999999998765 789
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++ +|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+....
T Consensus 81 lv~e~~~~-~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELMET-DLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchhh-hHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 99999984 8999986543 689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCC---CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccC---------CC-------C
Q 037111 844 PDS---SNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD---------SS-------L 903 (964)
Q Consensus 844 ~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~---------~~-------~ 903 (964)
... .......+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||........ .. .
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 543 123345678899999999887 789999999999999999999999854322100 00 0
Q ss_pred CCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 904 PGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........... .....+.+ ...........+.+++.+||+++|++||+++++++
T Consensus 235 ~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 235 TSEKARNYLKS-LPKKPKKP-LSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred cccchhhHHhh-cccCCcch-hHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 00000000000 00000000 00011223456788999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=302.94 Aligned_cols=264 Identities=23% Similarity=0.364 Sum_probs=198.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec----CceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH----ARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 763 (964)
++|+..+.||+|+||.||+|..+ +|+.||+|++............+.+|+.++++++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 67999999999999999999654 68999999987543333445677889999999999999999998763 34689
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+. |+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 85 lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 85 VVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 9999996 5999998644 3489999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCC----Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC----CCCCCCh------
Q 037111 844 PDSS----NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS----SLPGANM------ 908 (964)
Q Consensus 844 ~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~----~~~~~~~------ 908 (964)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......... ...+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~ 238 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNR 238 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhh
Confidence 3321 1123468889999998765 45889999999999999999999998543221000 0000000
Q ss_pred --hHHHHhh---hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 909 --NEAIDHM---FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 909 --~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+. .....+.++ .........++.+++.+||+.+|++||++++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 239 IGSDRVRKYIQNLPRKQPVPW-SKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hchhhHHHHHhhcccCCCCCH-HHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0001111 111111110 1111234567889999999999999999999876
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=287.11 Aligned_cols=250 Identities=22% Similarity=0.342 Sum_probs=197.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc---CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--cee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT---GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 762 (964)
.+|+..+.||+|+||.||+|... +++.||+|.+.... ........+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 36889999999999999999754 68899999875321 1233446788999999999999999999998764 468
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++|+||+++++|.+++.... .+++..+.+++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 89999999999999996543 378889999999999999999999 9999999999999999999999999999765
Q ss_pred CCCC---CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 843 KPDS---SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 843 ~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
.... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||.... ..+.+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~ 225 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE-----------AMAAIFKIATQP 225 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC-----------HHHHHHHHHcCC
Confidence 4321 11223468889999999998889999999999999999999999985321 112222222211
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.++. ........+.+++.+||. +|.+||++.++++
T Consensus 226 ~~~~----~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 226 TKPM----LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCC----CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 1111 122344567788889998 5799999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=289.58 Aligned_cols=250 Identities=21% Similarity=0.303 Sum_probs=198.1
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEecccc---CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT---GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+|.+.+.||+|+||.||++... .+..+++|.++... ........+..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4788899999999999999664 34456666654321 1222334577899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 766 YEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
|||+++++|.+++.. .....+++..+..++.|+++|+.|||+. +++|+||+|+||+++. +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999999864 2344689999999999999999999999 9999999999999975 569999999997765
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..........+++.|+|||...+..++.++|+||||+++|+|++|+.||... ...+..........+.
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~-----------~~~~~~~~~~~~~~~~- 224 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ-----------NFLSVVLRIVEGPTPS- 224 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----------cHHHHHHHHHcCCCCC-
Confidence 5444444556888999999998888999999999999999999999997421 1122233332222221
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......++.+++.+||+.+|++||++.++++
T Consensus 225 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 225 ----LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ----CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 12345567888999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=294.48 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=202.3
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 765 (964)
++|+..+.||+|+||.||+|... +++.||+|++.... ......+.+..|+.++++++ ||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888999999999999999764 78999999986422 22334467889999999998 99999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999997653 589999999999999999999999 9999999999999999999999999998765543
Q ss_pred CC--------------------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCC
Q 037111 846 SS--------------------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905 (964)
Q Consensus 846 ~~--------------------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~ 905 (964)
.. ......++..|+|||...+..++.++||||+|+++|++++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------- 226 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN--------- 226 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc---------
Confidence 21 1223457889999999988889999999999999999999999976322
Q ss_pred CChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCH----HHHHH
Q 037111 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM----QIVCK 959 (964)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~----~evl~ 959 (964)
...............+ ......+.+++.+||+.+|++||++ +++++
T Consensus 227 --~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 227 --EYLTFQKILKLEYSFP------PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred --HHHHHHHHHhcCCCCC------CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 1122222222222211 1224567889999999999999999 77764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=315.05 Aligned_cols=201 Identities=19% Similarity=0.311 Sum_probs=160.4
Q ss_pred HhhcccccceeecCCceeEEEEEeCC--CCeEEEEEe--------------c-cccCchhhHHHHHHHHHHHhCCCCCce
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELPS--GDTVAVKKL--------------H-SFTGETTHQKEFLSEIKALTGVRHRNI 749 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~--------------~-~~~~~~~~~~~~~~E~~~l~~l~h~ni 749 (964)
..++|++.+.||+|+||+||++..+. +..+++|.+ . ...........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35689999999999999999986532 222222211 0 001122234568899999999999999
Q ss_pred eeEEeeeecCceeEEEEEeccCCCHHHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC
Q 037111 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSET---ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD 826 (964)
Q Consensus 750 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~ 826 (964)
+++++++...+..|+|+|++. +++.+++.... ........+..++.|++.||+|||++ +||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999995 48888775422 12234566778999999999999999 999999999999999
Q ss_pred CCCceEEeccCcccccCCCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 037111 827 FEYEAHVSDFGTAKLLKPDSS-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891 (964)
Q Consensus 827 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p 891 (964)
.++.+||+|||+++.+..... ......|++.|+|||++.+..++.++|||||||++|||++|+.+
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999987654432 22345799999999999999999999999999999999998754
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=301.28 Aligned_cols=265 Identities=23% Similarity=0.387 Sum_probs=194.6
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----ce
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 761 (964)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... .......+.+|+.++++++||||+++++++... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 36799999999999999999965 478999999986422 223346678899999999999999999987654 35
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++|+||+++ ++.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 83 ~~lv~e~~~~-~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 83 VYIVQELMET-DLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEEehhccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceee
Confidence 8999999975 88888743 3488999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCC---cccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC----CCCCCChhHHHH
Q 037111 842 LKPDSSN---WSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS----SLPGANMNEAID 913 (964)
Q Consensus 842 ~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~ 913 (964)
....... .....|++.|+|||.+.+ ..++.++||||+||++|+|++|+.||......... ........+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 5433221 123467889999998754 46889999999999999999999998532210000 000000001111
Q ss_pred hhhcc-------CCC--CC-ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 914 HMFDA-------RLP--PP-WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 914 ~~~~~-------~~~--~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
.+... ..+ +. ...........++.+++.+||+.||++||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 10000 000 00 0000011224568899999999999999999999863
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.2e-32 Score=300.81 Aligned_cols=260 Identities=21% Similarity=0.345 Sum_probs=192.1
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------ce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------RH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 761 (964)
++|...+.||+|+||.||+|.. .+|+.||||++............+.+|+.++++++||||+++++++... ..
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 6899999999999999999975 4689999999875433333345688999999999999999999998654 34
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++|+||+.. ++.++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.
T Consensus 95 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred EEEEeccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 6999999964 7877652 2488899999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHHhh-
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAIDHM- 915 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~~- 915 (964)
.... .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.......... ..+..........
T Consensus 167 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T cd07879 167 ADAE---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLE 243 (342)
T ss_pred CCCC---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhc
Confidence 4322 223467888999999876 458899999999999999999999986322110000 0000000000000
Q ss_pred -------hc--cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 -------FD--ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 -------~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. ...+.............++.+++.+||+.||++||++++++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 244 DKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred ccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 000100000001123345788999999999999999999974
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.7e-32 Score=294.49 Aligned_cols=263 Identities=21% Similarity=0.336 Sum_probs=196.6
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEEEe
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
|++.+.||+|++|+||+|... +++.||||++...... .......+|+..+++++ |||++++++++.+++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 567889999999999999875 5788999998653322 22334557899999999 99999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+ +|+|.+++.......+++..+..++.|++.|++|||++ +++|+||+|+||+++.++.++|+|||.+........
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (283)
T cd07830 80 M-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP- 154 (283)
T ss_pred C-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC-
Confidence 9 78999999776555689999999999999999999999 999999999999999999999999999976543322
Q ss_pred ccccccccccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-----CCCCCC---hh--HHHHhhhc
Q 037111 849 WSELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-----SLPGAN---MN--EAIDHMFD 917 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~-~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-----~~~~~~---~~--~~~~~~~~ 917 (964)
.....++..|+|||.+. ...++.++|+||||+++|||++|+.||......... ...... .. ........
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 23456788999999875 445789999999999999999999998543221000 000000 00 00000111
Q ss_pred cCCCCCc---cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPW---LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..++... ..........++.+++.+||..+|++||+++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 1111000 00001112356889999999999999999999975
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=293.60 Aligned_cols=247 Identities=26% Similarity=0.433 Sum_probs=195.2
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccc-cCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSF-TGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.|+..+.||+|+||.||+|+.. +++.||+|.+... .........+.+|+.+++.++|+|++++++++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 4667788999999999999764 6788999988642 2233344678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+. |++.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.+.......
T Consensus 96 ~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~- 169 (308)
T cd06634 96 YCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN- 169 (308)
T ss_pred ccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCcc-
Confidence 997 58888775433 3478899999999999999999999 99999999999999999999999999987654332
Q ss_pred Cccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 NWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
...+++.|+|||.+. ...++.++|||||||++|+|++|+.||.... ..+..........+..
T Consensus 170 ---~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~- 234 (308)
T cd06634 170 ---XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----------AMSALYHIAQNESPAL- 234 (308)
T ss_pred ---cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc-----------HHHHHHHHhhcCCCCc-
Confidence 345788999999975 3457889999999999999999999974321 1112222222221111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
........+.+++.+||..+|++||++.++++.
T Consensus 235 ---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 235 ---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred ---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 112344567888999999999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=292.17 Aligned_cols=252 Identities=22% Similarity=0.315 Sum_probs=196.2
Q ss_pred cccccceeecCCceeEEEEEe----CCCCeEEEEEeccccC--chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCcee
Q 037111 690 NFDESFCIGRGGYGSVYKAEL----PSGDTVAVKKLHSFTG--ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 762 (964)
+|++.+.||+|+||.||+|+. .+|+.||+|++..... .....+.+.+|+.+++++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999965 3688999999864321 223346678899999999 599999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999999654 3478889999999999999999998 9999999999999999999999999999765
Q ss_pred CCCCC-CccccccccccccccccccC--CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 843 KPDSS-NWSELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 843 ~~~~~-~~~~~~g~~~y~aPE~~~~~--~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... ......|+..|+|||.+.+. .++.++||||||+++|+|++|+.||..... .....+....+....
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-------~~~~~~~~~~~~~~~ 228 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-------KNSQAEISRRILKSE 228 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-------cccHHHHHHHhhccC
Confidence 44322 12244688899999998753 467899999999999999999999853211 111122222222222
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.+.+ ......+.+++.+||..||++|| +++++++
T Consensus 229 ~~~~------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 PPYP------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CCCC------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 1111 12345577888899999999997 6666654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=286.46 Aligned_cols=248 Identities=21% Similarity=0.324 Sum_probs=190.5
Q ss_pred HHHHHhhccccccee--ecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 683 EIIRSINNFDESFCI--GRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 683 ~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
+.....++|++.+.+ |+|+||.||++.. .+++.+|+|.+....... . |+.....+ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~--e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----I--EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----h--hHHHHHHhhcCCCEEEEEEEEec
Confidence 344455677777766 9999999999965 467889999876422111 1 22222212 79999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccC
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFG 837 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg 837 (964)
.+..++||||+++|+|.+++.... .+++..+..++.|+++|+.|||+. +++||||+|+||+++.++ .++++|||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 999999999999999999997653 689999999999999999999999 999999999999999998 99999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
.+....... ...++..|+|||++.+..++.++||||+|+++|||++|+.||....... ......... ..
T Consensus 156 ~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~ 224 (267)
T PHA03390 156 LCKIIGTPS----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE------LDLESLLKR-QQ 224 (267)
T ss_pred cceecCCCc----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch------hhHHHHHHh-hc
Confidence 987654322 2357889999999999899999999999999999999999986322110 111111111 12
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-~~evl~ 959 (964)
...+. .......+.+++.+||+++|++||+ ++++++
T Consensus 225 ~~~~~------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 225 KKLPF------IKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ccCCc------ccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 11111 1234556788889999999999996 588874
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.3e-32 Score=292.04 Aligned_cols=264 Identities=25% Similarity=0.370 Sum_probs=200.6
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|+..+.||+|++|.||+|... +++.||+|.+............+..|+.++++++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999765 5899999998764433444567889999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 849 (964)
+ ++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+..........
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 155 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY 155 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcccc
Confidence 8 59999997653 3589999999999999999999999 99999999999999999999999999998765444333
Q ss_pred cccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHH---hh--hccC
Q 037111 850 SELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAID---HM--FDAR 919 (964)
Q Consensus 850 ~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~---~~--~~~~ 919 (964)
....++..|+|||.+.+. .++.++||||||+++|||++|+.||.......... .-+........ .+ .+..
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (282)
T cd07829 156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPT 235 (282)
T ss_pred CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccc
Confidence 344567789999998776 78999999999999999999999985432110000 00000000000 00 0001
Q ss_pred CC---CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LP---PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+ ..............+.+++.+||..||++||++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 236 FPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 11 00000111122457889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=288.12 Aligned_cols=243 Identities=21% Similarity=0.254 Sum_probs=185.6
Q ss_pred eeecCCceeEEEEEeC-CCCeEEEEEeccccCc-hhhHHHHHHHH---HHHhCCCCCceeeEEeeeecCceeEEEEEecc
Q 037111 696 CIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE-TTHQKEFLSEI---KALTGVRHRNIVKFYGFCSHARHSFLVYEYLE 770 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (964)
.||+|+||.||+|... +++.||+|.+...... ......+..|. ..++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3899999999999654 6889999998653222 11112233343 34455689999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcc
Q 037111 771 RGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850 (964)
Q Consensus 771 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 850 (964)
||+|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+....... ..
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--~~ 153 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PH 153 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--Cc
Confidence 99999998654 3589999999999999999999999 99999999999999999999999999987554322 22
Q ss_pred ccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccch
Q 037111 851 ELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929 (964)
Q Consensus 851 ~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (964)
...|+..|+|||.+.++ .++.++||||+||++|||++|+.||...... ................+
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~------ 219 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--------DKHEIDRMTLTMAVELP------ 219 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc--------chHHHHHHhhccCCCCC------
Confidence 34689999999998754 6899999999999999999999998643221 11111111111111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 930 EDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 930 ~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.....++.+++.+|+..+|++|| ++.++++
T Consensus 220 ~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 220 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 12245678888899999999999 9999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=298.61 Aligned_cols=268 Identities=21% Similarity=0.315 Sum_probs=196.9
Q ss_pred HHHHHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-
Q 037111 682 EEIIRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA- 759 (964)
Q Consensus 682 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~- 759 (964)
.++....++|+..+.||+|+||.||+|.. ++++.||+|++............+.+|+.++++++||||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 34555668999999999999999999964 5789999999875333333446688899999999999999999988643
Q ss_pred -----ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 760 -----RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 760 -----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
...+++++++ +++|.+++... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~ 162 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKIL 162 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEe
Confidence 3468888887 77999888543 488999999999999999999999 99999999999999999999999
Q ss_pred ccCcccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChh
Q 037111 835 DFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMN 909 (964)
Q Consensus 835 Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~ 909 (964)
|||++...... .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.......... .......
T Consensus 163 dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T cd07877 163 DFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 239 (345)
T ss_pred ccccccccccc---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99998764322 233467889999998866 468889999999999999999999985322110000 0000000
Q ss_pred HHH--------Hhhhc--cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 910 EAI--------DHMFD--ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 910 ~~~--------~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
... ..... ...+..............+.+++.+|++.||++||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 000 00000 011111000000112345788999999999999999999874
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-32 Score=269.24 Aligned_cols=265 Identities=20% Similarity=0.354 Sum_probs=205.6
Q ss_pred HHHHHHHhhcccccceeecCCceeEEEE-EeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeec
Q 037111 681 YEEIIRSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSH 758 (964)
Q Consensus 681 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 758 (964)
+++.-+.++ +.||+|+|+.|-.+ ...+|.+||||++.+..+ ..+..+.+|++++.+.+ |+||++++++|++
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g--HsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG--HSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCc--hHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 455544443 46999999999888 567899999999976533 34577889999998885 9999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceEEec
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAHVSD 835 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~kl~D 835 (964)
++..|+|||-|.||+|..++.++.. +++.++.++.++|+.||++||.+ ||.|||+||+|||-.... -+||+|
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~~--F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRKH--FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeec
Confidence 9999999999999999999976554 88999999999999999999999 999999999999997654 489999
Q ss_pred cCcccccCCCC-------CCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCC
Q 037111 836 FGTAKLLKPDS-------SNWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL 903 (964)
Q Consensus 836 fg~a~~~~~~~-------~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~ 903 (964)
|.++..+.... ....+.+|+..|||||+.. ...|+.+.|.||+||++|-|+.|..||.......=.|.
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd 302 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD 302 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence 98876543221 1123567888999999753 23478899999999999999999999976655333333
Q ss_pred CCCCh----hHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 904 PGANM----NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 904 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+..- +...+.+..+.+.-| +..+.....+.-+++...+-.|+..|.++.+++.
T Consensus 303 rGe~Cr~CQ~~LFesIQEGkYeFP--dkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 303 RGEVCRVCQNKLFESIQEGKYEFP--DKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCCccHHHHHHHHHHHhccCCcCC--hhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 33322 244555666655422 2234444455556666778899999999988765
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.1e-32 Score=297.98 Aligned_cols=266 Identities=21% Similarity=0.317 Sum_probs=193.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-------
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------- 759 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 759 (964)
+++|+..+.||+|+||.||+|..+ +++.||+|++............+.+|++++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999764 688999999865433333334567899999999999999999987543
Q ss_pred -ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 760 -RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 760 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
...++||||+.+ ++.+.+... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.++++|||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCcc
Confidence 346999999975 777777543 33589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC-----------ccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccC------
Q 037111 839 AKLLKPDSSN-----------WSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD------ 900 (964)
Q Consensus 839 a~~~~~~~~~-----------~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~------ 900 (964)
++........ .....+++.|+|||.+.+. .++.++||||||+++|||++|+.||........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9765432211 1223567889999987654 578999999999999999999999863322100
Q ss_pred ---CCCCCC-ChhHHHHh----hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 901 ---SSLPGA-NMNEAIDH----MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 901 ---~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.. ........ ......++. ...........+.+++.+|+..||++|||+.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRT-LEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCcc-HHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 000000 00000000 000011110 00011122356889999999999999999999874
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.9e-33 Score=317.35 Aligned_cols=205 Identities=25% Similarity=0.347 Sum_probs=181.7
Q ss_pred HHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 684 IIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 684 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.....++|++.++||+|+||.|..++.+ +++.||+|++.+... .......|..|-.+|.--+.+.|+.++-.|+++.+
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~ 149 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERY 149 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccc
Confidence 3334578999999999999999999775 688899999976432 34455789999999998899999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
+|+|||||+||+|-..+.+.. ++++..++.++..|+-||+-+|+. |+|||||||+|||+|..|++|++|||.+-.
T Consensus 150 LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred eEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHh
Confidence 999999999999999997665 588899999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCC-Cccccccccccccccccc----c-CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 037111 842 LKPDSS-NWSELAGTYGYVAPELAY----T-MKVTEKCDVYSFGVLALEVIKGQHPKD 893 (964)
Q Consensus 842 ~~~~~~-~~~~~~g~~~y~aPE~~~----~-~~~~~~sDvwSlGvll~el~tg~~p~~ 893 (964)
+..++. .....+|||.|++||++. + +.|....|.||+||++|||+.|..||.
T Consensus 225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 875544 445678999999999986 2 568999999999999999999999985
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=297.17 Aligned_cols=264 Identities=24% Similarity=0.364 Sum_probs=197.4
Q ss_pred HHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-Ccee
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-ARHS 762 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 762 (964)
....++|+..+.||+|+||.||+|..+ +++.||+|++..........+.+..|+.++++++||||+++++++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 345678999999999999999999654 78999999886543333445678899999999999999999999865 5678
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++++|||.+...
T Consensus 86 ~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 86 YFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQ 158 (328)
T ss_pred EEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence 9999998 5699988853 2377888889999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHHhhh-
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAIDHMF- 916 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~~~- 916 (964)
... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||.......... .-+....+......
T Consensus 159 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd07856 159 DPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235 (328)
T ss_pred CCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 322 223457889999998765 568999999999999999999999985332100000 00000001111100
Q ss_pred ----------ccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 ----------DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ----------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+.+ ...........+.+++.+|+..+|++||++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 236 ENTLRFVQSLPKREPVP-FSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred hhhHHHHhhccccCCCc-HHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000111 01111123467889999999999999999999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-31 Score=290.30 Aligned_cols=245 Identities=25% Similarity=0.420 Sum_probs=192.9
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
|...+.||+|+||+||+|+.. +++.||+|++..... .......+.+|+.+++.++|||++++++++.+....|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555677999999999999754 688999999864322 233345788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+. |++.+++.... .++++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+.....
T Consensus 103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 96 58888875433 4588999999999999999999999 999999999999999999999999998864332
Q ss_pred ccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 849 WSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||..... ............+..
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~-- 240 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----------MSALYHIAQNDSPTL-- 240 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHHhcCCCCC--
Confidence 22346888999999984 45688899999999999999999999753211 122222221111111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||+.+|++||++.+++.
T Consensus 241 --~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 241 --QSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred --CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11123345778888999999999999999885
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-31 Score=297.19 Aligned_cols=254 Identities=21% Similarity=0.305 Sum_probs=192.6
Q ss_pred hcccc-cceeecCCceeEEEEEeC-CCCeEEEEEeccccCchh------------hHHHHHHHHHHHhCCCCCceeeEEe
Q 037111 689 NNFDE-SFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETT------------HQKEFLSEIKALTGVRHRNIVKFYG 754 (964)
Q Consensus 689 ~~~~~-~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~l~~ 754 (964)
++|.. .+.||+|+||+||+|..+ +++.||||++........ ....+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 35554 467999999999999754 689999999864322110 0124778999999999999999999
Q ss_pred eeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 755 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
++..++..++||||+. |+|.+++... ..+++.....++.|++.|++|||+. +++||||+|+||+++.++.++++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEEC
Confidence 9999999999999997 5999998643 3488899999999999999999999 99999999999999999999999
Q ss_pred ccCcccccCCC--------------CCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 037111 835 DFGTAKLLKPD--------------SSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899 (964)
Q Consensus 835 Dfg~a~~~~~~--------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~ 899 (964)
|||.+...... ........+++.|+|||.+.+. .++.++||||+||++|||++|+.||......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~- 240 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI- 240 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 99998765411 1111223467789999998764 4688999999999999999999998643221
Q ss_pred CCCCCCCChhHHHHhhhc---cC-------------------CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 037111 900 DSSLPGANMNEAIDHMFD---AR-------------------LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIV 957 (964)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~---~~-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ev 957 (964)
+....+.. .. ..+............++.+++.+|++.+|++||+++|+
T Consensus 241 ----------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 310 (335)
T PTZ00024 241 ----------DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEA 310 (335)
T ss_pred ----------HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHH
Confidence 11111100 00 00000001112234567899999999999999999999
Q ss_pred HH
Q 037111 958 CK 959 (964)
Q Consensus 958 l~ 959 (964)
+.
T Consensus 311 l~ 312 (335)
T PTZ00024 311 LK 312 (335)
T ss_pred hc
Confidence 75
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-32 Score=247.48 Aligned_cols=255 Identities=22% Similarity=0.386 Sum_probs=199.9
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|+..++||+|.||+||+|+.+ +++.||+|++.-...++.......+|+.+++.++|+|||++++....++...+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4667788999999999999654 688899999976555555556788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
|.. +|..|..+-.+ .++.+.++.++.|+++|+.++|++ ++.|||+||.|.+++.+|+.|++|||+++.++-+-..
T Consensus 83 cdq-dlkkyfdslng-~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred hhH-HHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence 965 99999876543 388899999999999999999999 9999999999999999999999999999988766555
Q ss_pred ccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc----------
Q 037111 849 WSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---------- 917 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 917 (964)
++..+-|..|.+|.++.+.. |+...|+||-||++.|+.....|. +++.+....+.+++.
T Consensus 158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrpl----------fpg~dvddqlkrif~~lg~p~ed~w 227 (292)
T KOG0662|consen 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL----------FPGNDVDDQLKRIFRLLGTPTEDQW 227 (292)
T ss_pred eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCC----------CCCCcHHHHHHHHHHHhCCCccccC
Confidence 56667899999999999876 888999999999999999755553 233333333322211
Q ss_pred --------cCCCCCc-cccchHHHH----HHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 --------ARLPPPW-LEVGVEDKL----KSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 --------~~~~~~~-~~~~~~~~~----~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...-|-+ ....+.... ..=.+++.+.+.-+|..|-++++.++
T Consensus 228 ps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 228 PSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 1000000 001111111 12246666888899999999998765
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=296.65 Aligned_cols=263 Identities=20% Similarity=0.317 Sum_probs=195.6
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-----
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----- 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 760 (964)
..++|+..+.||+|+||.||+|.. .+++.||||++............+.+|+.++++++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 456799999999999999999964 47899999998643333334456889999999999999999999987653
Q ss_pred -eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 761 -HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 761 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
..++||||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++++|||.+
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 458999999 6799988853 3488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC----CCCCCChhHHHHh
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS----SLPGANMNEAIDH 914 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~ 914 (964)
...... .....+++.|+|||.+.+ ..++.++||||+|+++|++++|+.||......... ........+....
T Consensus 166 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07880 166 RQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK 242 (343)
T ss_pred cccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 765432 223457889999999876 45889999999999999999999998633210000 0000000000000
Q ss_pred hhc-------cCCC---CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 915 MFD-------ARLP---PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 915 ~~~-------~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+.. ...+ +.............+.+++.+|++.||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 243 LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred hcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0000 00000011123345789999999999999999999873
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=282.52 Aligned_cols=238 Identities=26% Similarity=0.354 Sum_probs=195.0
Q ss_pred eecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCH
Q 037111 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL 774 (964)
Q Consensus 697 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 774 (964)
||+|+||.||++... +++.||+|.+..... .......+..|+.++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999765 588999999865322 223456788999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccc
Q 037111 775 ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG 854 (964)
Q Consensus 775 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g 854 (964)
.+++.... .+++..+..++.|+++|+.|||+. +++|+||+|+||+++.++.++++|||.+..............+
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCG 155 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcC
Confidence 99996553 488999999999999999999998 9999999999999999999999999999876544333345567
Q ss_pred ccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHH
Q 037111 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLK 934 (964)
Q Consensus 855 ~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (964)
+..|+|||...+..++.++|+||||+++|++++|+.||..... .+....+.....+.+ ...+.
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~------~~~~~ 218 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----------KEIYEKILKDPLRFP------EFLSP 218 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHhcCCCCCC------CCCCH
Confidence 8899999999888889999999999999999999999853221 233333333322221 11245
Q ss_pred HHHHHHHHccCCCCCCCCCHHH
Q 037111 935 SIIEVALSCVDANPERRPNMQI 956 (964)
Q Consensus 935 ~l~~li~~cl~~dp~~RPs~~e 956 (964)
.+.+++.+||..||++||++.+
T Consensus 219 ~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 219 EARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHHhcCCHhhCCCccc
Confidence 6788899999999999999943
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-33 Score=274.16 Aligned_cols=255 Identities=26% Similarity=0.359 Sum_probs=196.7
Q ss_pred ccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHH-HhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKA-LTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
.+....||.|+||+|++-.+ +.|+..|||++..... ...++++..|.+. ++.-++||||+++|.+-.++..|+.||.
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 34456699999999999955 5799999999986443 4556788888887 4555799999999999999999999999
Q ss_pred ccCCCHHHHh---hhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 769 LERGSLARIL---SSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 769 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|.- |++.+- ..-....+++..+-+|+...+.||+||.... .|||||+||+|||++..|.+|+||||.+......
T Consensus 145 Md~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 145 MDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS 221 (361)
T ss_pred Hhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence 965 666543 3344556888888899999999999998765 8999999999999999999999999999765533
Q ss_pred CCCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 846 SSNWSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
-. .+.-+|-..|||||.+.. ..|+.+|||||+|+++||+.||..|+..... .-+.+..++.+..|.-
T Consensus 222 iA-kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s----------vfeql~~Vv~gdpp~l 290 (361)
T KOG1006|consen 222 IA-KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS----------VFEQLCQVVIGDPPIL 290 (361)
T ss_pred HH-hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH----------HHHHHHHHHcCCCCee
Confidence 22 223367788999999863 4589999999999999999999999642111 1133333344433322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
.......+....+..++..|+.+|-..||..+++.++
T Consensus 291 ~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 291 LFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 2222223456678899999999999999999988753
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=298.87 Aligned_cols=253 Identities=24% Similarity=0.398 Sum_probs=213.6
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec-----C
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH-----A 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-----~ 759 (964)
..+.|++...||.|.+|.||+++. ++++.+|||+... ..+...+++.|.++++.. +|||++.++|+|.. +
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~---~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDP---TEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecC---CccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 456788999999999999999954 4788899998754 233346778899998887 59999999999854 4
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
+.+|+|||||.|||..|+++...+.++.|..+..|+..++.|+.+||.. .++|||||-.||+++.++.||++|||++
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVS 170 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeee
Confidence 6899999999999999999887788899999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccccccccccccC-----CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
......-....+..|||.|||||++... .|+.++|+||+|++..||.-|.+|+....+ +.-
T Consensus 171 aQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP--------------mra 236 (953)
T KOG0587|consen 171 AQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP--------------MRA 236 (953)
T ss_pred eeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch--------------hhh
Confidence 9888777777888999999999998643 477899999999999999999999754433 222
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
++.....||.....+....+++.++|..|+.+|-++||++.++++
T Consensus 237 LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 237 LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 233333333344456788899999999999999999999988875
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=297.80 Aligned_cols=263 Identities=21% Similarity=0.336 Sum_probs=196.5
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce----
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH---- 761 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 761 (964)
..++|+..+.||+|++|.||+|+.. +++.||||++............+.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567999999999999999999765 67899999986543333444667889999999999999999998876554
Q ss_pred --eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 762 --SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 762 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
.++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||+|+||+++.++.++|+|||.+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999999 5699999864 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHHh
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAIDH 914 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~ 914 (964)
...... .....++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.......... ...........+
T Consensus 166 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 166 RHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred cccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence 765433 233467888999998865 367889999999999999999999985322110000 000000000000
Q ss_pred h--------hc--cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 915 M--------FD--ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 915 ~--------~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+ .. ...+.............++.+++.+|+++||++|||+.+|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0 00 000000000001122467889999999999999999999875
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=315.11 Aligned_cols=148 Identities=30% Similarity=0.397 Sum_probs=131.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+++|++.+.||+|+||.||+|... +++.||||+++... ........+..|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 467999999999999999999765 68899999987532 2233346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
|||+.+++|.+++.... .+++..++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999996543 478889999999999999999998 99999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-32 Score=286.79 Aligned_cols=245 Identities=23% Similarity=0.355 Sum_probs=199.9
Q ss_pred cceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCC
Q 037111 694 SFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.++||.|.||+||-|.+ ++|+.||||++.+..-.......+.+|+.++..++||.||.+...|+..+..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 46899999999999954 5899999999977655555557889999999999999999999999999999999999955
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC---CceEEeccCcccccCCCCCCc
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE---YEAHVSDFGTAKLLKPDSSNW 849 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~ 849 (964)
+..+++-+....++++..-..+..||+.||.|||.. +|+|+|+||+|||+... .++|+||||+|+.++.. ...
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-sFR 723 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-SFR 723 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh-hhh
Confidence 877777777777899998899999999999999999 99999999999999654 47999999999988744 445
Q ss_pred cccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccch
Q 037111 850 SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929 (964)
Q Consensus 850 ~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (964)
..++|||.|.|||++....|...-|+||.||++|.-+.|..||...++ .++.++..--.-.+.| +
T Consensus 724 rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd----------IndQIQNAaFMyPp~P-----W 788 (888)
T KOG4236|consen 724 RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED----------INDQIQNAAFMYPPNP-----W 788 (888)
T ss_pred hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc----------hhHHhhccccccCCCc-----h
Confidence 678999999999999999999999999999999999999999863322 2222222111111122 3
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 037111 930 EDKLKSIIEVALSCVDANPERRPNMQIVC 958 (964)
Q Consensus 930 ~~~~~~l~~li~~cl~~dp~~RPs~~evl 958 (964)
.+.....+++|...++..=++|-+.+..+
T Consensus 789 ~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 789 SEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred hhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 44555667778888888888888876543
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=293.91 Aligned_cols=264 Identities=22% Similarity=0.324 Sum_probs=191.9
Q ss_pred cccccceeecCCceeEEEEEeC-C--CCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC----ce
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-S--GDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA----RH 761 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 761 (964)
+|+..+.||+|+||.||+++.. + +..||+|++..........+.+.+|+.+++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999765 3 67899999865333333456778899999999 599999999975432 45
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++++||+. ++|.+++... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 789999986 5999988543 4588999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCC----Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC----CCCCCChhHHH
Q 037111 842 LKPDSS----NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS----SLPGANMNEAI 912 (964)
Q Consensus 842 ~~~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~ 912 (964)
...... ......|++.|+|||...+ ..++.++||||+||++|+|++|+.||......... ...+....+..
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL 234 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 543221 1223468899999998765 46899999999999999999999998643211000 00000000000
Q ss_pred Hhhhc----------cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFD----------ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~----------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+.. ...+..............+.+++.+|++.||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 000100000011112456889999999999999999999864
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-32 Score=276.75 Aligned_cols=243 Identities=23% Similarity=0.358 Sum_probs=200.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (964)
.+|....+||+|+||.|..|..+ +.+.||||++++... ...+.+.-+.|-++++-. +-|.++++..+|+.-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46888999999999999999655 567799999876422 222233445566776655 478899999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+.||+|.-+++.-+. +.+..+..+|.+||-||=+||++ +||.||+|.+||++|.+|++||+|||+++.---+
T Consensus 429 MEyvnGGDLMyhiQQ~Gk--FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK--FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred EEEecCchhhhHHHHhcc--cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccccC
Confidence 999999999998865443 67778899999999999999999 9999999999999999999999999999865555
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....+.+|||.|+|||++...+|..++|.|||||++|||+.|+.||+ +.+..+....+.+....-|
T Consensus 504 ~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFd-----------GeDE~elF~aI~ehnvsyP-- 570 (683)
T KOG0696|consen 504 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD-----------GEDEDELFQAIMEHNVSYP-- 570 (683)
T ss_pred CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCC-----------CCCHHHHHHHHHHccCcCc--
Confidence 666678899999999999999999999999999999999999999976 3444566666655544322
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPN 953 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs 953 (964)
....++...+....+.+.|.+|..
T Consensus 571 ----KslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 571 ----KSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ----ccccHHHHHHHHHHhhcCCccccC
Confidence 344556677788888999999864
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=265.91 Aligned_cols=252 Identities=22% Similarity=0.332 Sum_probs=204.3
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
..++|+..++||+|+|+.|..++++ +.+.||+|++++.- .+.+....+..|-.+..+- +||.+|.+..+|+.+..++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 4578999999999999999999765 57789999987642 2344455677787777666 6999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+|.||++||+|.-+++.+. .++++.++.+..+|.-||.|||++ |||.||+|.+||++|.+|++|++|+|+++..-
T Consensus 328 fvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 9999999999988886554 488999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhH-HHHhhhccCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE-AIDHMFDARLPP 922 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 922 (964)
.++...++.+|||.|+|||.+.+..|...+|.|++||+++||+.|+.||+.... .-+..+.+. ..+-++...+..
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm----~n~d~ntedylfqvilekqiri 478 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGM----DNPDMNTEDYLFQVILEKQIRI 478 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecC----CCcccchhHHHHHHHhhhcccc
Confidence 677777889999999999999999999999999999999999999999986542 122233322 233334444432
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCC
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPN 953 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs 953 (964)
|. ....+...++..-+++||.+|..
T Consensus 479 pr------slsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 479 PR------SLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred cc------eeehhhHHHHHHhhcCCcHHhcC
Confidence 21 12223445666788899999864
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-31 Score=292.63 Aligned_cols=262 Identities=24% Similarity=0.312 Sum_probs=190.7
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--------
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-------- 759 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 759 (964)
.+|+..+.||.|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~--~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC--CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 5789999999999999999965 468899999986433 23456788999999999999999999876543
Q ss_pred ------ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceE
Q 037111 760 ------RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAH 832 (964)
Q Consensus 760 ------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~k 832 (964)
...++||||++ ++|.+++.. ..+++..+..++.||++|++|||+. +++||||||+||+++. ++.++
T Consensus 83 ~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 83 GSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred ccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEE
Confidence 35789999997 599988853 2488899999999999999999999 9999999999999985 55789
Q ss_pred EeccCcccccCCCCC---Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------C
Q 037111 833 VSDFGTAKLLKPDSS---NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------S 901 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------~ 901 (964)
++|||.++....... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .
T Consensus 156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 235 (342)
T cd07854 156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESV 235 (342)
T ss_pred ECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 999999976543221 1123357888999998654 5578899999999999999999999864322100 0
Q ss_pred CCCCC-ChhHHH----Hhhh-ccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 902 SLPGA-NMNEAI----DHMF-DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 902 ~~~~~-~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..... ...... .... ....+.............++.+++.+||.+||++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 236 PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00000 000000 0000 0000000000001123356788999999999999999999874
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-32 Score=277.77 Aligned_cols=275 Identities=20% Similarity=0.304 Sum_probs=208.4
Q ss_pred cCCcccHHHHHHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-C-Cc---
Q 037111 675 YEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-H-RN--- 748 (964)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~n--- 748 (964)
.+|...|.......++|++...+|+|.||.|..+.. +.+..||||+++.- ..-.+..+-|++++.++. + |+
T Consensus 75 ~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~ 151 (415)
T KOG0671|consen 75 KDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKF 151 (415)
T ss_pred CCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCce
Confidence 345555655555678999999999999999999943 45789999998742 222344567899998883 2 33
Q ss_pred -eeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC
Q 037111 749 -IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 749 -iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~ 827 (964)
+|.+.+||...++.++|+|.+ |-|+.+|+..+...+++...++.|++|+++++++||+. +++|.|+||+||++..
T Consensus 152 rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvs 227 (415)
T KOG0671|consen 152 RCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVS 227 (415)
T ss_pred EEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEec
Confidence 788999999999999999998 55999999999999999999999999999999999999 9999999999999932
Q ss_pred --------------------CCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh
Q 037111 828 --------------------EYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK 887 (964)
Q Consensus 828 --------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t 887 (964)
...++|+|||.|+...... ...+.|.-|.|||++.+-+++.+.||||+||||+|+.|
T Consensus 228 s~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Elyt 304 (415)
T KOG0671|consen 228 SEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYT 304 (415)
T ss_pred cceEEEeccCCccceeccCCCcceEEEecCCcceeccCc---ceeeeccccCCchheeccCcCCccCceeeeeEEEEeec
Confidence 2358999999998755433 46678999999999999999999999999999999999
Q ss_pred CCCCCCccccccC--------CCCCCCChhHH-HHhhh-ccCCC-------------------CCccccchHHHHHHHHH
Q 037111 888 GQHPKDLLSSLSD--------SSLPGANMNEA-IDHMF-DARLP-------------------PPWLEVGVEDKLKSIIE 938 (964)
Q Consensus 888 g~~p~~~~~~~~~--------~~~~~~~~~~~-~~~~~-~~~~~-------------------~~~~~~~~~~~~~~l~~ 938 (964)
|...|+.-+..+. ..+|....... .++.+ .+++. ....-.........+++
T Consensus 305 G~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfD 384 (415)
T KOG0671|consen 305 GETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFD 384 (415)
T ss_pred cceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHH
Confidence 9998865443221 11221111111 11110 01111 00001112344567899
Q ss_pred HHHHccCCCCCCCCCHHHHHH
Q 037111 939 VALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 939 li~~cl~~dp~~RPs~~evl~ 959 (964)
++.+|+..||.+|+|++|++.
T Consensus 385 Ll~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 385 LLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHccCccccccHHHHhc
Confidence 999999999999999999874
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=285.72 Aligned_cols=239 Identities=24% Similarity=0.312 Sum_probs=188.8
Q ss_pred hhcccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (964)
.+.|+....+|.|+|+.|-++. ..+++..+||++.+.. .+..+|+.++... +||||+++.+.+.+..+.|+|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc------cccccccchhhhhcCCCcceeecceecCCceeeee
Confidence 3457777779999999998884 4578889999987542 2233567665444 799999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE-CCCCceEEeccCcccccCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL-DFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill-~~~~~~kl~Dfg~a~~~~~ 844 (964)
||.+.||-+.+.+..... . ...+.+|+.+|+.|+.|||++ ||||||+||+|||+ +..++++|+|||.++....
T Consensus 395 ~e~l~g~ell~ri~~~~~--~-~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 395 MELLDGGELLRRIRSKPE--F-CSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred ehhccccHHHHHHHhcch--h-HHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 999999988887754432 2 267778999999999999998 99999999999999 5889999999999987765
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ....+-|..|.|||+....+|++++|+||||+++|+|++|+.||..... ..+...++..++..
T Consensus 469 ~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~----------~~ei~~~i~~~~~s--- 532 (612)
T KOG0603|consen 469 S---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA----------GIEIHTRIQMPKFS--- 532 (612)
T ss_pred h---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc----------hHHHHHhhcCCccc---
Confidence 5 2344567899999999999999999999999999999999999863222 12333333333322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .......+++.+|++.||++||+|.++..
T Consensus 533 --~---~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 --E---CVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred --c---ccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 2 22334556667999999999999999853
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-32 Score=259.63 Aligned_cols=266 Identities=23% Similarity=0.377 Sum_probs=196.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-------
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------- 759 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 759 (964)
...|+...+||+|.||.||+|+.+ +|+.||+|++.-......-.....+|+.++..++|+|++.+++.|...
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 345777788999999999999654 678899987643222222234567899999999999999999988542
Q ss_pred -ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 760 -RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 760 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
...|+||.+|+. +|...+... ..+++..++.+++.++..||.|+|.. .|+|||+||.|++++.+|.+|++|||+
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccc
Confidence 357999999988 999998543 35689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC----Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccc-------------cC
Q 037111 839 AKLLKPDSS----NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSL-------------SD 900 (964)
Q Consensus 839 a~~~~~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~-------------~~ 900 (964)
++.+..... .+...+-|..|.+||.+.+ ..|+++.|||.-||++.||.||.+-+...... ..
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 976654322 2344566899999998876 46999999999999999999998876543321 11
Q ss_pred CCCCCCChhHHHHhhhccCCCCCccccchHHHHH------HHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 901 SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLK------SIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+|..+.-.....+-.++++.... ...++..+ +..+++.+++..||.+|+++++++.
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~-rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQK-RKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchh-hhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 2223332222233221121221100 00111222 4567778999999999999999874
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=270.25 Aligned_cols=219 Identities=21% Similarity=0.209 Sum_probs=174.1
Q ss_pred CCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCHHHHh
Q 037111 700 GGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL 778 (964)
Q Consensus 700 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 778 (964)
|.+|.||+++. .+++.||+|++.... .+..|...+....||||+++++++.+....++||||+++|+|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 89999999965 478899999986421 2334445555567999999999999999999999999999999998
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccccccc
Q 037111 779 SSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGY 858 (964)
Q Consensus 779 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y 858 (964)
.... .+++..+..++.|+++|++|||+. +++||||||+||+++.++.++++|||.+....... ....++..|
T Consensus 77 ~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~y 148 (237)
T cd05576 77 SKFL--NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---DGEAVENMY 148 (237)
T ss_pred HHhc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc---ccCCcCccc
Confidence 6543 488999999999999999999998 99999999999999999999999999876554321 223456789
Q ss_pred ccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHH
Q 037111 859 VAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIE 938 (964)
Q Consensus 859 ~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 938 (964)
+|||...+..++.++||||+|+++|||++|+.|++...... .......++. .....+.+
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------------~~~~~~~~~~--------~~~~~~~~ 207 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------------NTHTTLNIPE--------WVSEEARS 207 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------------ccccccCCcc--------cCCHHHHH
Confidence 99999988889999999999999999999998865321100 0000011111 12345778
Q ss_pred HHHHccCCCCCCCCCH
Q 037111 939 VALSCVDANPERRPNM 954 (964)
Q Consensus 939 li~~cl~~dp~~RPs~ 954 (964)
++.+|++.||++||++
T Consensus 208 li~~~l~~dp~~R~~~ 223 (237)
T cd05576 208 LLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHccCCHHHhcCC
Confidence 8899999999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-31 Score=277.70 Aligned_cols=246 Identities=23% Similarity=0.322 Sum_probs=201.5
Q ss_pred HhhcccccceeecCCceeEEEEEeCCCC-eEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELPSGD-TVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
...+++.+..||-|+||.|-.++.+... .+|+|++++.. .+......+..|-.+|...+.|.||++|-.|.+.+.+|+
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 4556778889999999999999776444 38899887643 344455678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
.||-|-||.++..+++.+ .++....+.++..+++|++|||++ +||.||+||+|.++|.+|.+|+.|||+|+.+..
T Consensus 498 LmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 498 LMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 999999999999996554 488888899999999999999999 999999999999999999999999999998876
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
+... -+++|||.|.|||++.....+.++|.||+|+++||+++|.+||....+ -....-++.+.-...
T Consensus 573 g~KT-wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp-----------mktYn~ILkGid~i~- 639 (732)
T KOG0614|consen 573 GRKT-WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP-----------MKTYNLILKGIDKIE- 639 (732)
T ss_pred CCce-eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch-----------HHHHHHHHhhhhhhh-
Confidence 6544 467899999999999999999999999999999999999999864333 122222222211111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPN 953 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs 953 (964)
.+....+...+++.+.+..+|.+|.-
T Consensus 640 ---~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 640 ---FPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ---cccccchhHHHHHHHHHhcCcHhhhc
Confidence 11234455677888999999999975
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-30 Score=269.49 Aligned_cols=259 Identities=29% Similarity=0.387 Sum_probs=192.2
Q ss_pred HHhhcccccceeecCCceeEEEE-EeCCCCeEEEEEecccc-Cc----hhhHHHHHHHHHHHhCCCCCceeeEEeeeecC
Q 037111 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFT-GE----TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA 759 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~-~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 759 (964)
...++|-....||+|+|+.||+| .+.+.+.||||+-.-.. .. ..-.+...+|.++-+.++||.||++|+||.-+
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 34457888889999999999999 56678889999753211 11 11124567899999999999999999999765
Q ss_pred -ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEec
Q 037111 760 -RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSD 835 (964)
Q Consensus 760 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~D 835 (964)
+..|-|+|||+|.+|+-|++... .+++.+++.|+.||+.||.||.+. .++|||-|+||.|||+-. -|.+||+|
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence 46789999999999999996554 388999999999999999999987 669999999999999954 47899999
Q ss_pred cCcccccCCCCCC-------ccccccccccccccccccC----CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC
Q 037111 836 FGTAKLLKPDSSN-------WSELAGTYGYVAPELAYTM----KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 836 fg~a~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~----~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~ 904 (964)
||+++.+..+.+. .+...||..|++||++.-+ ..+.++||||+||++|+++.|+.||.....-.+
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd---- 692 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD---- 692 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH----
Confidence 9999998766543 2345799999999998643 367899999999999999999999863322100
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVC 958 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl 958 (964)
.-....+-+...-.+|+. .. ...+...+|.+|+...-+.|-+..++.
T Consensus 693 -ILqeNTIlkAtEVqFP~K---Pv---VsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 693 -ILQENTILKATEVQFPPK---PV---VSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred -HHhhhchhcceeccCCCC---Cc---cCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 000011111111122221 11 122344567799988888887766653
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-30 Score=274.46 Aligned_cols=203 Identities=23% Similarity=0.343 Sum_probs=172.9
Q ss_pred cccccceeecCCceeEEEEE-eCCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
-|...+.||-|+||+|.+++ ..+...||.|.+.+.. ........+++|-.++..-+.+.||++|-.|++++.+|+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 47778899999999999994 4456679999987543 233445678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC----
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK---- 843 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~---- 843 (964)
|++||++..+|-+.+- +++..++.++.+++.|+++.|.+ |+|||||||+|||||.+|++||+|||++.-+.
T Consensus 710 YIPGGDmMSLLIrmgI--FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMGI--FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred ccCCccHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceeccc
Confidence 9999999999866544 78888899999999999999999 99999999999999999999999999986321
Q ss_pred -----CCCCC---------------------------------ccccccccccccccccccCCCCcchhHHHHHHHHHHH
Q 037111 844 -----PDSSN---------------------------------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 885 (964)
Q Consensus 844 -----~~~~~---------------------------------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el 885 (964)
.++.. ....+||+.|+|||++....|+...|.||.|||||||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 10000 0123699999999999999999999999999999999
Q ss_pred HhCCCCCCcccc
Q 037111 886 IKGQHPKDLLSS 897 (964)
Q Consensus 886 ~tg~~p~~~~~~ 897 (964)
+.|+.||-....
T Consensus 865 ~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 865 LVGQPPFLADTP 876 (1034)
T ss_pred hhCCCCccCCCC
Confidence 999999865443
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-30 Score=238.73 Aligned_cols=201 Identities=25% Similarity=0.432 Sum_probs=166.4
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHH-hCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKAL-TGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.+.......||+|+||.|-+.++ .+|...|+|+++... ....++....|+.+. +...+|.+|.++|...+....|+.
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv-n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV-NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc-ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 34455566799999999988855 478999999997643 345567788888884 556799999999999999999999
Q ss_pred EEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 766 YEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
||.|.- ||..|-.+ ..+..+++..+-+||..+.+||.|||++. .+||||+||+|||++.+|++|+||||.+....
T Consensus 124 ME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 124 MELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred HHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 999975 88877654 34456888888899999999999999985 89999999999999999999999999997665
Q ss_pred CCCCCcccccccccccccccccc----CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYT----MKVTEKCDVYSFGVLALEVIKGQHPKD 893 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~sDvwSlGvll~el~tg~~p~~ 893 (964)
..-.. +.-.|-..|||||.+.. ..|+.++||||+|+.+.||.+++.||+
T Consensus 201 dSiAk-t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 201 DSIAK-TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred hhhHH-HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 43221 22357778999998863 368999999999999999999999975
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=260.91 Aligned_cols=239 Identities=26% Similarity=0.405 Sum_probs=194.0
Q ss_pred CceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCHHHHhh
Q 037111 701 GYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILS 779 (964)
Q Consensus 701 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 779 (964)
+||.||+|... +++.||+|++........ .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 58999999876 489999999865332221 5789999999999999999999999999999999999999999999996
Q ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccccccccccc
Q 037111 780 SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV 859 (964)
Q Consensus 780 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~ 859 (964)
.... +++..+..++.+++++++|||+. +++|+||+|+||+++.++.++++|||.+....... ......+++.|+
T Consensus 80 ~~~~--~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~ 153 (244)
T smart00220 80 KRGR--LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYM 153 (244)
T ss_pred hccC--CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCC
Confidence 5443 78899999999999999999999 99999999999999999999999999998765442 233456788999
Q ss_pred cccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHH
Q 037111 860 APELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEV 939 (964)
Q Consensus 860 aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 939 (964)
+||...+..++.++||||+|+++|++++|..||... .......+............ ......++.++
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 220 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD----------DQLLELFKKIGKPKPPFPPP---EWKISPEAKDL 220 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC----------CcHHHHHHHHhccCCCCccc---cccCCHHHHHH
Confidence 999998888999999999999999999999997532 11222333332222221110 01144568889
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 037111 940 ALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 940 i~~cl~~dp~~RPs~~evl~ 959 (964)
+.+|+..+|++||++.++++
T Consensus 221 i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 221 IRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHccCCchhccCHHHHhh
Confidence 99999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-29 Score=280.98 Aligned_cols=266 Identities=16% Similarity=0.195 Sum_probs=178.8
Q ss_pred HhhcccccceeecCCceeEEEEEe-----------------CCCCeEEEEEeccccCch------------hhHHHHHHH
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-----------------PSGDTVAVKKLHSFTGET------------THQKEFLSE 737 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~------------~~~~~~~~E 737 (964)
..++|++.++||+|+||+||+|.. ..++.||||++....... ...+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 456899999999999999999953 245679999986422110 011223446
Q ss_pred HHHHhCCCCCc-----eeeEEeeeec--------CceeEEEEEeccCCCHHHHhhhcCC---------------------
Q 037111 738 IKALTGVRHRN-----IVKFYGFCSH--------ARHSFLVYEYLERGSLARILSSETA--------------------- 783 (964)
Q Consensus 738 ~~~l~~l~h~n-----iv~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~--------------------- 783 (964)
+.++.+++|.+ +++++++|.. ++..++||||+++|+|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 77777776654 4677787753 3568999999999999999864211
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC-Cccccccccccccc
Q 037111 784 -TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS-NWSELAGTYGYVAP 861 (964)
Q Consensus 784 -~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~g~~~y~aP 861 (964)
...++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++........ ......+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 1245678889999999999999999 999999999999999999999999999976543321 11123457899999
Q ss_pred cccccCCC----------------------CcchhHHHHHHHHHHHHhCCC-CCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 862 ELAYTMKV----------------------TEKCDVYSFGVLALEVIKGQH-PKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 862 E~~~~~~~----------------------~~~sDvwSlGvll~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
|.+..... ..+.||||+||++|||++|.. |+..........................
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 98754321 124799999999999999875 6543221111000000000111111111
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCC---CCCCCHHHHHH
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANP---ERRPNMQIVCK 959 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp---~~RPs~~evl~ 959 (964)
....+ ..........+++.+++..+| .+|+|++|+++
T Consensus 460 ~~~~~----~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 460 KYDFS----LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred CCCcc----cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11111 112234456677788998765 68999999875
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-30 Score=284.91 Aligned_cols=243 Identities=26% Similarity=0.388 Sum_probs=186.5
Q ss_pred ccccceeecCCcee-EEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEEe
Q 037111 691 FDESFCIGRGGYGS-VYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 691 ~~~~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
|...+++|.|+.|+ ||+|.+. |+.||||++-. ....-..+|+..++.- +|||||++++.-++....|+..|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL 584 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL 584 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence 44556799999995 7999985 89999999753 2234556899998877 499999999999999999999999
Q ss_pred ccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---C--CceEEeccCcccc
Q 037111 769 LERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---E--YEAHVSDFGTAKL 841 (964)
Q Consensus 769 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~--~~~kl~Dfg~a~~ 841 (964)
|.. +|.+++... ..........+.+..|++.|+++||+. +|||||+||.||||+. + ..++|+|||+++.
T Consensus 585 C~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 585 CAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred hhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 976 999999763 111111134567899999999999998 9999999999999976 3 4789999999998
Q ss_pred cCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhC-CCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 842 LKPDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-QHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 842 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
...+... .....||.+|+|||.+....-+.++||||+||++|+.++| .+||...-..+ ..++.
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-------------~NIl~ 727 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-------------ANILT 727 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-------------hhhhc
Confidence 8766433 3467799999999999998888899999999999999985 89987433211 11122
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....-..... ..++ +..++|.+|++++|..||+|.+|+.
T Consensus 728 ~~~~L~~L~~-~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 728 GNYTLVHLEP-LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred Cccceeeecc-CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 2111100000 1112 5668888999999999999999974
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=258.52 Aligned_cols=132 Identities=27% Similarity=0.433 Sum_probs=114.0
Q ss_pred hcccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-----C---CceeeEEeeeec-
Q 037111 689 NNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-----H---RNIVKFYGFCSH- 758 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~- 758 (964)
.+|...++||+|.|++||.+. ....+.||+|+.+.. +.-.+..+.||.++++++ | .+||++++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 578899999999999999994 457789999998742 222345678999998883 3 469999999975
Q ss_pred ---CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC
Q 037111 759 ---ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD 826 (964)
Q Consensus 759 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~ 826 (964)
+.+++||+|+. |-+|..+|.....+.++...+++|++||+.||.|||..+ +|||.||||+|||+.
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 45899999999 559999999988889999999999999999999999998 999999999999993
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=290.30 Aligned_cols=263 Identities=19% Similarity=0.223 Sum_probs=168.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC-C----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEee------
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-S----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF------ 755 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------ 755 (964)
..++|+..+.||+|+||.||+|+.. + +..||||++...... .....| .++...+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~----e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV----EIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh----HHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 4578999999999999999999765 4 689999997642211 111111 1112222222222221
Q ss_pred eecCceeEEEEEeccCCCHHHHhhhcCCC------------------CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecc
Q 037111 756 CSHARHSFLVYEYLERGSLARILSSETAT------------------EMDWSKRVNVIKGVAHALSYMHHECRPPIVHRD 817 (964)
Q Consensus 756 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~d 817 (964)
...+...++||||+.+++|.+++...... ......+..++.|++.||+|||+. +|+|||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCc
Confidence 24556899999999999999998653211 011234568999999999999999 999999
Q ss_pred CCCCCeEECC-CCceEEeccCcccccCCCC-CCccccccccccccccccccC----------------------CCCcch
Q 037111 818 VSSKNVLLDF-EYEAHVSDFGTAKLLKPDS-SNWSELAGTYGYVAPELAYTM----------------------KVTEKC 873 (964)
Q Consensus 818 lkp~Nill~~-~~~~kl~Dfg~a~~~~~~~-~~~~~~~g~~~y~aPE~~~~~----------------------~~~~~s 873 (964)
|||+|||++. ++.+||+|||+|+...... .......+++.|+|||.+... .++.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999986 5799999999998654332 223456789999999965422 234466
Q ss_pred hHHHHHHHHHHHHhCCCCCCccccccC--CCCCCCChhHHHHhhhccCCCCCccc--cchHHHHHHHHHHHHHccCCCCC
Q 037111 874 DVYSFGVLALEVIKGQHPKDLLSSLSD--SSLPGANMNEAIDHMFDARLPPPWLE--VGVEDKLKSIIEVALSCVDANPE 949 (964)
Q Consensus 874 DvwSlGvll~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~ 949 (964)
||||+||++|||+++..|++....... ....+.....+ .........+.... ...........+++.+|+..||+
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAW-RKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHH-HHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 999999999999998776432110000 00000011111 11111111100000 00001112345789999999999
Q ss_pred CCCCHHHHHH
Q 037111 950 RRPNMQIVCK 959 (964)
Q Consensus 950 ~RPs~~evl~ 959 (964)
+|||++++++
T Consensus 440 kR~ta~e~L~ 449 (566)
T PLN03225 440 QRISAKAALA 449 (566)
T ss_pred cCCCHHHHhC
Confidence 9999999975
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-30 Score=249.89 Aligned_cols=264 Identities=22% Similarity=0.364 Sum_probs=196.3
Q ss_pred ccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----ceeEE
Q 037111 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RHSFL 764 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~l 764 (964)
.+..+.||-|+||.||.++. ++|+.||.|++......-...+.+-+|+.++..++|.|++..+++.+-. .+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 44567799999999999965 4899999999876555555667889999999999999999988876543 35789
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|+|.|.. +|...+- ..+.++...++-+.+||++||.|||+. +|.||||||.|.+++.+...||+|||+++....
T Consensus 135 ~TELmQS-DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHh-hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence 9999965 8888773 445688888899999999999999999 999999999999999999999999999997765
Q ss_pred CCC-CccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCC-------CCC-CChh----H
Q 037111 845 DSS-NWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS-------LPG-ANMN----E 910 (964)
Q Consensus 845 ~~~-~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~-------~~~-~~~~----~ 910 (964)
... ..+..+-|..|.|||.+++.+ |+.+.||||.||++.|++.++..|....+.+... .+. ..+. .
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 533 333445688999999999764 8999999999999999999888776444322100 000 0011 1
Q ss_pred HHHhhhccCCCCCccc-----cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 911 AIDHMFDARLPPPWLE-----VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
.-..++....+++... ....+.-.+-+.+...++++||++|-+..+.+..
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 1122333333322111 1111222334566778999999999998877643
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=232.20 Aligned_cols=258 Identities=20% Similarity=0.336 Sum_probs=191.8
Q ss_pred hhcccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecC--ceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHA--RHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~ 763 (964)
.++|++.+++|+|-|+.||.|. ..+.++++||+++ +...+.+.+|+.+++.+. ||||+++++...+. ..+.
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK-----PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK-----PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeec-----hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 4679999999999999999994 5678899999986 344578899999999997 99999999999775 5788
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccCccccc
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLL 842 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~a~~~ 842 (964)
+|+||+.+.+....- ..++...++.++.+++.||+|+|++ ||+|||+||.||++|.. ..++++|+|+|.++
T Consensus 112 LiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred hHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhc
Confidence 999999987776654 2366678899999999999999999 99999999999999975 57999999999988
Q ss_pred CCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC-----C-----------
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP-----G----------- 905 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~-----~----------- 905 (964)
.+... ....+.+..|.-||.+.. ..|+..-|+|||||++..|+..+.||-....-.++... +
T Consensus 184 Hp~~e-YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 184 HPGKE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred CCCce-eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 76533 344566778899999875 45889999999999999999999998533321110000 0
Q ss_pred -CChhHHHHhhhccCCCCCccccch---H-HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 906 -ANMNEAIDHMFDARLPPPWLEVGV---E-DKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 906 -~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.....+|..... . -...+.++++.+.+..|-.+|||++|.+.
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 000001111111111111100000 0 01245677888999999999999999864
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=237.56 Aligned_cols=212 Identities=33% Similarity=0.591 Sum_probs=183.9
Q ss_pred eecCCceeEEEEEeCC-CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCHH
Q 037111 697 IGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLA 775 (964)
Q Consensus 697 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 775 (964)
||+|.+|.||++.... ++++++|++....... ....+.+|+..++.++|++++++++++......++++||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999997754 8999999987533221 3467899999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceEEeccCcccccCCCCCCcccccc
Q 037111 776 RILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAHVSDFGTAKLLKPDSSNWSELAG 854 (964)
Q Consensus 776 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~g 854 (964)
+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++++|||.+..............+
T Consensus 80 ~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (215)
T cd00180 80 DLLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVG 155 (215)
T ss_pred HHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccC
Confidence 9996543 3488899999999999999999999 9999999999999999 899999999999876554322334567
Q ss_pred ccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHH
Q 037111 855 TYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKL 933 (964)
Q Consensus 855 ~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (964)
...|++||..... .++.++|+|++|+++++|
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 8899999998877 788999999999999999
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 934 KSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 934 ~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
..+.+++.+|++.+|++||++.++++.+
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3477888899999999999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-28 Score=260.71 Aligned_cols=208 Identities=25% Similarity=0.345 Sum_probs=173.6
Q ss_pred ccHHHHHHHhhcccccceeecCCceeEEEEEeCC-CCeEEEEEeccccC-chhh-----HHHHHHHHHHHhCCC---CCc
Q 037111 679 LVYEEIIRSINNFDESFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTG-ETTH-----QKEFLSEIKALTGVR---HRN 748 (964)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~-----~~~~~~E~~~l~~l~---h~n 748 (964)
...+...+...+|...+.+|+|+||.|+.|.++. ...|+||.+.+..- ...+ .-.+-.|+++|..++ |+|
T Consensus 551 ~~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~N 630 (772)
T KOG1152|consen 551 IGCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHEN 630 (772)
T ss_pred ccceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccc
Confidence 3334444556779999999999999999998764 45688888764321 1111 123667999999996 999
Q ss_pred eeeEEeeeecCceeEEEEEeccC-CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC
Q 037111 749 IVKFYGFCSHARHSFLVYEYLER-GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 749 iv~l~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~ 827 (964)
|++++++|++++.+|++||-... -+|.+++.... .+++.....|++||+.|+++||+. +|||||||-+||.++.
T Consensus 631 IlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~ 705 (772)
T KOG1152|consen 631 ILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDS 705 (772)
T ss_pred hhhhhheeecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEec
Confidence 99999999999999999997544 49999996554 488999999999999999999999 9999999999999999
Q ss_pred CCceEEeccCcccccCCCCCCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCCC
Q 037111 828 EYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGQHPKD 893 (964)
Q Consensus 828 ~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwSlGvll~el~tg~~p~~ 893 (964)
+|-+|++|||.|...+.+ .+...+||.+|.|||++.+..|- .+-|||++|+++|.++....||.
T Consensus 706 ~g~~klidfgsaa~~ksg--pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 706 NGFVKLIDFGSAAYTKSG--PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CCeEEEeeccchhhhcCC--CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999999999876644 34577899999999999998874 57899999999999999988874
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-28 Score=261.97 Aligned_cols=251 Identities=25% Similarity=0.360 Sum_probs=203.6
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+....+|.|.||.||+++.+ +++..|||.++-..+ ...+-+.+|+-+++..+|||||.++|.+-..+..|+.||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 47888999999999999999654 788999999975433 334567789999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||.||+|.+.-+ ...++++.++..+.+...+|++|||+. +-+|||||-.||++++.|.+|++|||.+..+...-.
T Consensus 93 ycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati~ 167 (829)
T KOG0576|consen 93 YCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA 167 (829)
T ss_pred ecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhhh
Confidence 999999999764 445688999999999999999999999 899999999999999999999999999988877666
Q ss_pred Cccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 NWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
+...+.||+.|||||+.. .+.|....|||+.|+...|+-.-+.|.....+ ...-.+.......+.
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp------------mr~l~LmTkS~~qpp 235 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP------------MRALFLMTKSGFQPP 235 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch------------HHHHHHhhccCCCCC
Confidence 677889999999999864 45688999999999999999988877321111 111112222222111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVC 958 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl 958 (964)
...........+-++++.|+.++|.+||+++..+
T Consensus 236 ~lkDk~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 236 TLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred cccCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 2223334555678888899999999999998765
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-28 Score=250.99 Aligned_cols=404 Identities=23% Similarity=0.256 Sum_probs=237.4
Q ss_pred CCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccc-cccCCcccc-cCC
Q 037111 76 DQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFV-NHLNGSIPE-IGH 153 (964)
Q Consensus 76 ~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~~~-~~~ 153 (964)
..+|-...+....++|..|+|+.+.|.+|+.+++|+.||||+|+|+.+-|++|..|++|..|-+.+ |+|+..+.. |+.
T Consensus 59 ~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~g 138 (498)
T KOG4237|consen 59 TEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGG 138 (498)
T ss_pred ccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhh
Confidence 367888889999999999999987778999999999999999999988999999999998887776 889877665 899
Q ss_pred CCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCc-cccCCCCcchhhccccccc------------CCcc
Q 037111 154 LSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPS-SIGNLSNLVYLFLKKNHLR------------GPIP 220 (964)
Q Consensus 154 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~------------~~~~ 220 (964)
|..|+.|.+.-|++.-.....|..|++|..|.+.+|.+. .++. +|..+..++.+.+..|.+- ...|
T Consensus 139 L~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ 217 (498)
T KOG4237|consen 139 LSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNP 217 (498)
T ss_pred HHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhch
Confidence 999999999999999888899999999999999999998 5554 8899999999999999832 2223
Q ss_pred ccccCccccceeeccccccCCCChhhhhcc-cccceeeccccccccccCCcccCccccceeecccccccccCCcccccCc
Q 037111 221 SSFGYLRKLTKLELSNNQLSGSIPQEIGNL-KLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFM 299 (964)
Q Consensus 221 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 299 (964)
..++...-..-..|.++++....+..|... +.+..=-.+.+...+..| ...|..++
T Consensus 218 ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP-----------------------~~cf~~L~ 274 (498)
T KOG4237|consen 218 IETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICP-----------------------AKCFKKLP 274 (498)
T ss_pred hhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcCh-----------------------HHHHhhcc
Confidence 333333333333333333332222222111 111111111111111222 12344444
Q ss_pred cccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEcc
Q 037111 300 NLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLS 379 (964)
Q Consensus 300 ~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 379 (964)
+|+.|+|++|+|+++-+.+|.+...++.|.|..|++...-...|.++..|+.|+|.+|+|+...+..|..+..|.+|+|-
T Consensus 275 ~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~ 354 (498)
T KOG4237|consen 275 NLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLL 354 (498)
T ss_pred cceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehc
Confidence 44444444444444444444444444444444444444444455555555555555555555555555555555556555
Q ss_pred CCeeccccCcccc----------------CCCccceEeecccccCCC---CCCCCcccccCcEEeccCCcccccCCcccc
Q 037111 380 YNKFYGELSSNWW----------------NCPQLGILKIAGNNITGG---IPPEIGNATQLHELDFSSNHLVGKVPLELA 440 (964)
Q Consensus 380 ~N~i~~~~~~~~~----------------~~~~L~~L~L~~n~i~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 440 (964)
.|.+.....-+|. .-..++.+.+++..+... .|++.+-.+ ...-|.
T Consensus 355 ~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~------------s~~cP~--- 419 (498)
T KOG4237|consen 355 SNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLT------------SSPCPP--- 419 (498)
T ss_pred cCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCC------------CCCCCC---
Confidence 5555433221111 011223333333222110 111100000 000111
Q ss_pred ccCCcc-eeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCe
Q 037111 441 NLTSLN-DLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSE 519 (964)
Q Consensus 441 ~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 519 (964)
..+-+. +...++..+. .+|..+- ..-++|++.+|.++ .+|.. .+.+| .+|+|+|+|+......|.++++|..
T Consensus 420 ~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~t 492 (498)
T KOG4237|consen 420 PCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLST 492 (498)
T ss_pred CcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhhe
Confidence 112222 2233333333 3333221 24456677777775 44444 45566 7777777776555666777777777
Q ss_pred ecccCc
Q 037111 520 LDLSHN 525 (964)
Q Consensus 520 L~Ls~N 525 (964)
|-||+|
T Consensus 493 lilsyn 498 (498)
T KOG4237|consen 493 LILSYN 498 (498)
T ss_pred eEEecC
Confidence 777765
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-28 Score=250.00 Aligned_cols=402 Identities=23% Similarity=0.249 Sum_probs=251.2
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhccc-ccccCCccccccCccccceeec
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKK-NHLRGPIPSSFGYLRKLTKLEL 234 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L 234 (964)
.-..++|..|+|+.+.|.+|+.+++|+.||||+|.|+.+-|++|.++.+|..|-+.+ |+|+......|++|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 456788888888877778888999999999999999888889999998887777766 8899877788999999999999
Q ss_pred cccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc------------ccCCcccccCcccc
Q 037111 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS------------GHIPQEIGNFMNLN 302 (964)
Q Consensus 235 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~------------~~~~~~~~~l~~L~ 302 (964)
.-|++.-...+.|..+++|..|.+..|.+....-.+|..+..++.+.+..|.+. ...|-.++.+.-..
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 999998777888999999999999999988433347888899999998888732 23334444444444
Q ss_pred EEEeeCccCcccCCcccccC-CcceEEEeeccccccccc-ccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccC
Q 037111 303 SLSVGGNQFTGFLPQNICQS-GSLQYFSVHDNYFIGSLP-KTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380 (964)
Q Consensus 303 ~L~l~~N~l~~~~p~~~~~~-~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 380 (964)
...+.++++...-+..|... .++..--.+.+...+..| ..|+.+++|+.|+|++|+|+.+....|.....++.|.|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 44555555544433333211 111111111222222222 3455555666666666666655555565555566666666
Q ss_pred CeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccc-cCCccccccCCcceeecccccccCCC
Q 037111 381 NKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVG-KVPLELANLTSLNDLILNGNQLSGGI 459 (964)
Q Consensus 381 N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~ 459 (964)
|+|..+....|.++..|+.|+|.+|+|+...|.+|..+..|.+|.|-.|.+.- .--.|++. .|.++.-.+..
T Consensus 308 N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~-------Wlr~~~~~~~~ 380 (498)
T KOG4237|consen 308 NKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE-------WLRKKSVVGNP 380 (498)
T ss_pred chHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHH-------HHhhCCCCCCC
Confidence 66555555555555555555555555555555555555555555555554421 00011111 01111111111
Q ss_pred chhhhccCCCCceecccCcccc---ccCCCccc---------ccccc-eecCCccccCccchhhhhccccCCeecccCcc
Q 037111 460 PPELGLLTDLGYLDLSANRFSK---SIPGNMGY---------LLKLH-YLNMSSNEFSQEIPIQLGKLVQLSELDLSHNL 526 (964)
Q Consensus 460 ~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~---------l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 526 (964)
| -+.-..++.++++++.+.+ ..|++.+- .+-+. ....|++.++ .+|..+. ..-++|++.+|.
T Consensus 381 ~--Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~ 455 (498)
T KOG4237|consen 381 R--CQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNA 455 (498)
T ss_pred C--CCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccch
Confidence 1 1122345556666555432 12322211 22233 3334444443 4554433 456789999999
Q ss_pred ccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCC
Q 037111 527 LRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573 (964)
Q Consensus 527 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N 573 (964)
++ .+|.+ .+.+| .+|||+|+|+..-...|.+|++|.+|-||+|
T Consensus 456 ~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 456 IT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 98 67776 67788 8999999999777888999999999999987
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=245.35 Aligned_cols=200 Identities=20% Similarity=0.279 Sum_probs=168.1
Q ss_pred HHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC------CCceeeEEeeee
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR------HRNIVKFYGFCS 757 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~ 757 (964)
+..-.+|.+....|+|-|++|.+|.. .-|..||||++.. .+.-.+.=+.|+++++++. --|+++++..|.
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn---NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN---NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeec---chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 34456899999999999999999954 3578999999974 3333455668999999984 357999999999
Q ss_pred cCceeEEEEEeccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEec
Q 037111 758 HARHSFLVYEYLERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSD 835 (964)
Q Consensus 758 ~~~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~D 835 (964)
...++|||+|-..- +|.+.+++.+ ...+....+..++.|+.-||..|-.. +|+|.||||.|||+++.. .+||||
T Consensus 505 hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCD 580 (752)
T KOG0670|consen 505 HKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCD 580 (752)
T ss_pred hcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeecc
Confidence 99999999998855 9999998743 34578889999999999999999999 999999999999999865 679999
Q ss_pred cCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 037111 836 FGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKD 893 (964)
Q Consensus 836 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~ 893 (964)
||.|....... .+...-+..|.|||++.|-+|++..|+||.||.|||+.||+..|.
T Consensus 581 fGSA~~~~ene--itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFp 636 (752)
T KOG0670|consen 581 FGSASFASENE--ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFP 636 (752)
T ss_pred Ccccccccccc--ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecC
Confidence 99998765443 233344567999999999999999999999999999999997763
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-26 Score=233.05 Aligned_cols=195 Identities=26% Similarity=0.379 Sum_probs=165.7
Q ss_pred hcccccceeecCCceeEEEE-EeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------ce
Q 037111 689 NNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------RH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 761 (964)
.+|.-...+|.|.- .|..+ ..-.+++||+|++..........+...+|...+..+.|+||++++.+|.-. ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 35666777888888 56666 333689999999876655566667788999999999999999999998543 35
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+|||+|.. +|...+. ..++-.++..+..|+..|+.|||+. +|+|||+||+||++..+..+||.|||+|+.
T Consensus 96 ~y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcc
Confidence 7999999965 9999886 2366678899999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKD 893 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~ 893 (964)
.... -..+..+.+..|.|||++.+..+.+.+||||.||++.||++|+.-|.
T Consensus 168 e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 168 EDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred cCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence 5544 34456678889999999999999999999999999999999997764
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-26 Score=225.16 Aligned_cols=249 Identities=20% Similarity=0.325 Sum_probs=181.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEe-eeecCceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYG-FCSHARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~-~~~~~~~~~l 764 (964)
.+.|.+.+.+|+|.||.+-.++++ +.+.+|+|.+.. .....++|.+|...--.+ .|.||+.-|+ .|+..+..++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~---p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR---PQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc---chhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 456889999999999999999765 677899998865 344568899998875555 4999998776 4777888899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC--CCceEEeccCccccc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF--EYEAHVSDFGTAKLL 842 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~~ 842 (964)
++||++.|+|.+-+... .+.+....+++.|+++|+.|||+. ++||||||.+|||+-. ..++|+||||.++..
T Consensus 100 ~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred eeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccccc
Confidence 99999999999988553 377888899999999999999999 9999999999999943 358999999998765
Q ss_pred CCCCCCccccccccccccccccccC-----CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
+..- .....+-.|.+||..... ...+.+|||.||+++|.++||+.||+...... -+......+..+. .
T Consensus 174 g~tV---~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d---~~Y~~~~~w~~rk-~ 246 (378)
T KOG1345|consen 174 GTTV---KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD---KPYWEWEQWLKRK-N 246 (378)
T ss_pred Ccee---hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC---chHHHHHHHhccc-C
Confidence 4322 222345568899976432 24678999999999999999999997332211 1111121221111 1
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIV 957 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ev 957 (964)
.+.|. .......+..++..+-+.++|++|=-..++
T Consensus 247 ~~~P~-----~F~~fs~~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 247 PALPK-----KFNPFSEKALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred ccCch-----hhcccCHHHHHHHHHhcCCcccccchhHHH
Confidence 12221 122333456667778889999998433333
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-25 Score=230.77 Aligned_cols=198 Identities=33% Similarity=0.531 Sum_probs=171.0
Q ss_pred ccccceeecCCceeEEEEEeCC-CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|+..+.||+|++|.||+|...+ ++.+|+|.+...... .....+.+|++.+++++|+|++++++++......++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 5667889999999999997764 889999998753322 24578889999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-CC
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS-SN 848 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~~ 848 (964)
++++|.+++...... +++..+..++.+++.++.+||+. +++|+|++|+||+++.++.++++|||.+....... ..
T Consensus 80 ~~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 80 EGGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred CCCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 999999999764432 78899999999999999999999 99999999999999999999999999998765442 12
Q ss_pred cccccccccccccccc-ccCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 037111 849 WSELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGQHPKD 893 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~-~~~~~~~~sDvwSlGvll~el~tg~~p~~ 893 (964)
.....++..|++||.. ....++.++|||+||+++|||++|+.||.
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 2344677889999998 66778889999999999999999999984
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-25 Score=228.81 Aligned_cols=201 Identities=26% Similarity=0.384 Sum_probs=165.4
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeee
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCS 757 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 757 (964)
.+....+.|..+++||+|.|++||++... ..+.||+|.+.... ....+.+|++++..+. +.||+++.+++.
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----~p~ri~~El~~L~~~gG~~ni~~~~~~~r 105 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----SPSRILNELEMLYRLGGSDNIIKLNGCFR 105 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----CchHHHHHHHHHHHhccchhhhcchhhhc
Confidence 34455667899999999999999999543 46789999986432 2356889999999885 999999999999
Q ss_pred cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceEEecc
Q 037111 758 HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAHVSDF 836 (964)
Q Consensus 758 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Df 836 (964)
..+...+|+||++.....++... ++...+..++..+..||+++|.. |||||||||.|++.+. .+.-.|.||
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDF 177 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDF 177 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEec
Confidence 99999999999999988888743 55788999999999999999999 9999999999999976 467899999
Q ss_pred CcccccC-----------------C-CC----------------CC----------ccccccccccccccccccC-CCCc
Q 037111 837 GTAKLLK-----------------P-DS----------------SN----------WSELAGTYGYVAPELAYTM-KVTE 871 (964)
Q Consensus 837 g~a~~~~-----------------~-~~----------------~~----------~~~~~g~~~y~aPE~~~~~-~~~~ 871 (964)
|+|.... + .+ .. .....||++|.|||++... ..+.
T Consensus 178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt 257 (418)
T KOG1167|consen 178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT 257 (418)
T ss_pred hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence 9997110 0 00 00 1124699999999998754 4688
Q ss_pred chhHHHHHHHHHHHHhCCCCCCcc
Q 037111 872 KCDVYSFGVLALEVIKGQHPKDLL 895 (964)
Q Consensus 872 ~sDvwSlGvll~el~tg~~p~~~~ 895 (964)
++||||.||++.-+++++.||-..
T Consensus 258 aiDiws~GVI~Lslls~~~PFf~a 281 (418)
T KOG1167|consen 258 AIDIWSAGVILLSLLSRRYPFFKA 281 (418)
T ss_pred ccceeeccceeehhhccccccccC
Confidence 999999999999999999998543
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.7e-24 Score=268.22 Aligned_cols=346 Identities=21% Similarity=0.261 Sum_probs=200.3
Q ss_pred ccccCCCCcCeeecccCC------ccCcCCcccCCCC-cccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCC
Q 037111 102 SPIGNLTKLKFLNLSSNH------FSGKIPSEIGLLT-NLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVS 174 (964)
Q Consensus 102 ~~~~~l~~L~~L~Ls~n~------l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 174 (964)
.+|.++++|+.|.+..+. +...+|..+..++ +|+.|++.++.+...+..+ ...+|+.|+|++|++. .+|..
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~-~L~~~ 629 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLE-KLWDG 629 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCcC-CccCCcEEECcCcccc-ccccc
Confidence 456666777777665443 2334566555553 4677777666665444444 4566777777777766 45666
Q ss_pred CCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccc
Q 037111 175 IGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLT 254 (964)
Q Consensus 175 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 254 (964)
+..+++|++|+|+++.....+|. ++.+++|++|+|++|.....+|..++.+++|+.|++++|..-+.+|..+ ++++|+
T Consensus 630 ~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~ 707 (1153)
T PLN03210 630 VHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLY 707 (1153)
T ss_pred cccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCC
Confidence 66677777777766554445553 6666677777776665555666666677777777776654333555443 566677
Q ss_pred eeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeeccc
Q 037111 255 DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNY 334 (964)
Q Consensus 255 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~ 334 (964)
.|++++|...+.+|.. ..+|++|++++|.+. .+|..+ .+++|+.|++.++...... ..
T Consensus 708 ~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~-~~---------------- 765 (1153)
T PLN03210 708 RLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLW-ER---------------- 765 (1153)
T ss_pred EEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhcc-cc----------------
Confidence 7777766544444432 345667777777665 445443 4566666666553321110 00
Q ss_pred ccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCC
Q 037111 335 FIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPE 414 (964)
Q Consensus 335 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~ 414 (964)
+....+......++|+.|+|++|......|..++.+++|+.|++++|..-+..+... ++++|+.|++++|.....+|..
T Consensus 766 ~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~ 844 (1153)
T PLN03210 766 VQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI 844 (1153)
T ss_pred ccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc
Confidence 000001111122344445555444444444444455555555555443222222222 4556666666665443333332
Q ss_pred CcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCc
Q 037111 415 IGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANR 478 (964)
Q Consensus 415 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 478 (964)
.++|++|+|++|.|+ .+|.++..+++|+.|+|++|.--..+|..+..+++|+.|++++|.
T Consensus 845 ---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 845 ---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 357888888888887 678888888889999888854333577777888888888888774
|
syringae 6; Provisional |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-25 Score=216.18 Aligned_cols=250 Identities=21% Similarity=0.342 Sum_probs=194.3
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
+.....+|.+...|+.|+|+++ |..+++|++..........+.|..|.-.++-+.||||++++|.|....++.++..||
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 3445567889999999999997 666778888765555555678999999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe--ccCcccccCCCCC
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS--DFGTAKLLKPDSS 847 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~--Dfg~a~~~~~~~~ 847 (964)
+.|+|+..++.+.....+-.++.+++.+||+|++|||+.. +-|----+....|++|++.+++|+ |--++...
T Consensus 270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfqe----- 343 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE----- 343 (448)
T ss_pred cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeeec-----
Confidence 9999999999887777788899999999999999999973 233344688999999999988875 32222111
Q ss_pred CccccccccccccccccccCCCC---cchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVT---EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~---~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
....-.|.||+||.+...+-+ .++|+|||++++||+.|...||...++.+- .+ +..-+-+...+||
T Consensus 344 --~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec------gm-kialeglrv~ipp-- 412 (448)
T KOG0195|consen 344 --VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC------GM-KIALEGLRVHIPP-- 412 (448)
T ss_pred --cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh------hh-hhhhccccccCCC--
Confidence 122346889999999877644 479999999999999999999976554221 01 1111112233333
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.....+.+++.-|++.||.+||.++.|+-+|+.
T Consensus 413 ------gis~hm~klm~icmnedpgkrpkfdmivpilek 445 (448)
T KOG0195|consen 413 ------GISRHMNKLMNICMNEDPGKRPKFDMIVPILEK 445 (448)
T ss_pred ------CccHHHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence 344567788889999999999999999988874
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=263.54 Aligned_cols=344 Identities=22% Similarity=0.278 Sum_probs=245.1
Q ss_pred ccCcCcceeEEeccCCc------cccCCCccccCCC-CcCeeecccCCccCcCCcccCCCCcccEEEccccccCCccccc
Q 037111 79 PFSLFSHLSYLDLNENQ------LYGNIPSPIGNLT-KLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEI 151 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~n~------l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~ 151 (964)
.|..+++|+.|.+..+. +...+|..|..++ +|+.|++.++.+. .+|..+ .+.+|++|+|.+|++......+
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~L~~~~ 630 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEKLWDGV 630 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccccccccc
Confidence 46678999999997653 3446788887774 6999999999997 788887 5799999999999998777778
Q ss_pred CCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccce
Q 037111 152 GHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTK 231 (964)
Q Consensus 152 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 231 (964)
..+++|+.|+|++|...+.+|. ++.+++|++|+|++|.....+|..++++++|+.|++++|..-+.+|..+ ++++|+.
T Consensus 631 ~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~ 708 (1153)
T PLN03210 631 HSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYR 708 (1153)
T ss_pred ccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCE
Confidence 8999999999999876667774 8899999999999988777899999999999999999976555677665 7899999
Q ss_pred eeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccC
Q 037111 232 LELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQF 311 (964)
Q Consensus 232 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 311 (964)
|++++|...+.+|.. ..+|+.|+|++|.+. .+|..+ .+++|++|++.++... .+...+..+
T Consensus 709 L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~-~l~~~~~~l------------- 769 (1153)
T PLN03210 709 LNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSE-KLWERVQPL------------- 769 (1153)
T ss_pred EeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchh-hcccccccc-------------
Confidence 999999766566643 468999999999998 677655 5788999998875432 111111100
Q ss_pred cccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccc
Q 037111 312 TGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNW 391 (964)
Q Consensus 312 ~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~ 391 (964)
.+......++|+.|++++|.....+|..++++++|+.|++++|...+..|... .+++|+.|++++|..-...+.
T Consensus 770 ---~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~-- 843 (1153)
T PLN03210 770 ---TPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD-- 843 (1153)
T ss_pred ---chhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc--
Confidence 01111112344444444444444445555555555555555543222222222 455666666666543222221
Q ss_pred cCCCccceEeecccccCCCCCCCCcccccCcEEeccCC-cccccCCccccccCCcceeeccccc
Q 037111 392 WNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSN-HLVGKVPLELANLTSLNDLILNGNQ 454 (964)
Q Consensus 392 ~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~l~~l~~L~~L~L~~N~ 454 (964)
...+|+.|+|++|.|+ .+|.++..+++|+.|+|++| ++. .+|..+..+++|+.|++++|.
T Consensus 844 -~~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 844 -ISTNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred -cccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 1256777788888776 56778888899999999884 454 577778888999999988874
|
syringae 6; Provisional |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-24 Score=264.62 Aligned_cols=194 Identities=16% Similarity=0.187 Sum_probs=139.7
Q ss_pred CCCC-CceeeEEeee-------ecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 037111 743 GVRH-RNIVKFYGFC-------SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814 (964)
Q Consensus 743 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ii 814 (964)
.++| +||+.++++| ...+..+.++||+ +++|.+++... ...+++.++..++.||++||+|||++ +|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 4456 6888888887 2334678889988 55999999643 34589999999999999999999999 999
Q ss_pred eccCCCCCeEECC-------------------CCceEEeccCcccccCCCC----------------CCccccccccccc
Q 037111 815 HRDVSSKNVLLDF-------------------EYEAHVSDFGTAKLLKPDS----------------SNWSELAGTYGYV 859 (964)
Q Consensus 815 H~dlkp~Nill~~-------------------~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~g~~~y~ 859 (964)
||||||+|||++. ++.+|++|||+++...... .......||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999965 3455666666665321100 0001135788899
Q ss_pred cccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHH
Q 037111 860 APELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEV 939 (964)
Q Consensus 860 aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 939 (964)
|||++.+..++.++|||||||++|||++|..|+... ...+........++.. .........+
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~-------------~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 244 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK-------------SRTMSSLRHRVLPPQI-----LLNWPKEASF 244 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH-------------HHHHHHHHHhhcChhh-----hhcCHHHHHH
Confidence 999999999999999999999999999988875311 1111111111222111 1112334577
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 037111 940 ALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 940 i~~cl~~dp~~RPs~~evl~ 959 (964)
+.+||+++|.+||++.||++
T Consensus 245 ~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 245 CLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHhCCCChhhCcChHHHhh
Confidence 88999999999999999975
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-23 Score=206.91 Aligned_cols=163 Identities=21% Similarity=0.265 Sum_probs=124.1
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccc
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 851 (964)
|+|.++++..+ ..+++.+++.++.|++.||+|||+. + ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc-----
Confidence 68999997543 4599999999999999999999998 5 999999999999999 99987665432
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC-CccccchH
Q 037111 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP-PWLEVGVE 930 (964)
Q Consensus 852 ~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 930 (964)
..|++.|+|||++.+..++.++|||||||++|||+||+.||..... .............+. +.......
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 133 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE----------LSAILEILLNGMPADDPRDRSNLE 133 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch----------hcHHHHHHHHHhccCCccccccHH
Confidence 2578999999999999999999999999999999999999853221 111111211111110 00001112
Q ss_pred HHHH--HHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 931 DKLK--SIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 931 ~~~~--~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
.... .+.+++.+||..+|++||++.++++.+
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~ 166 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHC 166 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHH
Confidence 2222 588999999999999999999999865
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.9e-23 Score=239.44 Aligned_cols=263 Identities=26% Similarity=0.328 Sum_probs=128.8
Q ss_pred cceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeC
Q 037111 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGG 308 (964)
Q Consensus 229 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 308 (964)
-..|+|++|.++ .+|..+. ++|+.|++++|+|+ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|++++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 445666666666 4555443 35666666666666 34431 345555666555555 23321 23445555555
Q ss_pred ccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccC
Q 037111 309 NQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELS 388 (964)
Q Consensus 309 N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~ 388 (964)
|.++.. |.. ..+|+.|++++|+++.++. ..++|+.|+|++|+|++...
T Consensus 272 N~L~~L-------------------------p~l---p~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~ 319 (788)
T PRK15387 272 NPLTHL-------------------------PAL---PSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA 319 (788)
T ss_pred Cchhhh-------------------------hhc---hhhcCEEECcCCccccccc----cccccceeECCCCccccCCC
Confidence 554422 221 1345566666666665432 23556666777666664321
Q ss_pred ccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCC
Q 037111 389 SNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTD 468 (964)
Q Consensus 389 ~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 468 (964)
...+|+.|++++|.|++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|+|+. +|.. ..+
T Consensus 320 ----lp~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~ 383 (788)
T PRK15387 320 ----LPSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSG 383 (788)
T ss_pred ----CcccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccc
Confidence 11245555555555553 2221 1356666666666653 3322 2345555566666552 3322 234
Q ss_pred CCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccC
Q 037111 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSH 548 (964)
Q Consensus 469 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 548 (964)
|+.|+|++|+|++ +|.. ..+|+.|++++|+|+. +|..+ .+|+.|+|++|+|+ .+|..+.++++|+.|+|++
T Consensus 384 L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 384 LKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 454 (788)
T ss_pred cceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCC
Confidence 5555555555543 2321 1345555555555542 33221 23444555555554 4455555555555555555
Q ss_pred CcCCCcccccc
Q 037111 549 NNLSGSIPTNF 559 (964)
Q Consensus 549 N~l~~~~~~~~ 559 (964)
|+|++..+..+
T Consensus 455 N~Ls~~~~~~L 465 (788)
T PRK15387 455 NPLSERTLQAL 465 (788)
T ss_pred CCCCchHHHHH
Confidence 55554444443
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=239.52 Aligned_cols=316 Identities=22% Similarity=0.339 Sum_probs=154.6
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCC----CCCCCCCCCCCCCCceeec----------------eEeCCCCCeeEEe
Q 037111 6 ASNSIEAARGLLKWKATLQNHNNSLLPS----WTLDPVNATNITTPCTWSG----------------ISCNHAGRIISIN 65 (964)
Q Consensus 6 ~~~~~~~~~all~~k~~~~~~~~~~l~s----W~~~~~~~~~~~~~C~w~g----------------v~C~~~~~v~~l~ 65 (964)
+--++++.+.++++.+.+..++ ++++ |.+. ++.|.=.. |.|.. +.|+.+.
T Consensus 58 ~~~~~~~~~~~~~~~~~l~~p~--~~~~~~~~~~~~-------~~fc~~~~~~~~~l~~~~~~~~~tv~~~~-~~vt~l~ 127 (754)
T PRK15370 58 ETASPEEIKSKFECLRMLAFPA--YADNIQYSRGGA-------DQYCILSENSQEILSIVFNTEGYTVEGGG-KSVTYTR 127 (754)
T ss_pred CCCCHHHHHHHHHHHHHhcCCc--hhhccccccCCC-------CcccccCCcchhhheeeecCCceEEecCC-Ccccccc
Confidence 3446688999999999997644 4677 8764 56775333 66642 3344444
Q ss_pred cCCCCCCCccCC-----------------Cc---------------cCcCcceeEEeccCCccccCCCccccCCCCcCee
Q 037111 66 LTSTSLKGTLDQ-----------------FP---------------FSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFL 113 (964)
Q Consensus 66 l~~~~l~g~l~~-----------------~~---------------~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 113 (964)
..+......-+. .+ -+...+...|++++++++ .+|..+. +.|+.|
T Consensus 128 ~~g~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L 204 (754)
T PRK15370 128 VTESEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTL 204 (754)
T ss_pred cccccccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEE
Confidence 433221111100 00 011233455555555555 2444432 345555
Q ss_pred ecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCC
Q 037111 114 NLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG 193 (964)
Q Consensus 114 ~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 193 (964)
+|++|.|+ .+|..+. .+|++|++++|+++..+..+. ++|+.|+|++|+++ .+|..+. ++|++|++++|+++
T Consensus 205 ~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~LtsLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~- 275 (754)
T PRK15370 205 ILDNNELK-SLPENLQ--GNIKTLYANSNQLTSIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS- 275 (754)
T ss_pred EecCCCCC-cCChhhc--cCCCEEECCCCccccCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-
Confidence 55555555 3444432 355555555555554332221 34555555555555 3444432 34555555555555
Q ss_pred CCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccC
Q 037111 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSN 273 (964)
Q Consensus 194 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 273 (964)
.+|..+. ++|++|+|++|++++ +|..+. ++|+.|++++|+++. +|..+ .++|+.|++++|.+++ +|..+.
T Consensus 276 ~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~- 345 (754)
T PRK15370 276 CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASLP- 345 (754)
T ss_pred ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCccc--cccceeccccCCcccc-CChhhc-
Confidence 3444333 345555555555553 232221 345555555555552 33222 1345555555555552 343332
Q ss_pred ccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeee
Q 037111 274 LSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVR 353 (964)
Q Consensus 274 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 353 (964)
++|+.|++++|+|+ .+|..+. ++|+.|+|++|+|+.. |..+. .+|+.|+
T Consensus 346 -~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~L-------------------------P~~l~--~sL~~Ld 394 (754)
T PRK15370 346 -PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTNL-------------------------PENLP--AALQIMQ 394 (754)
T ss_pred -CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCCC-------------------------CHhHH--HHHHHHh
Confidence 34555555555554 2333331 3455555555554432 22222 2455566
Q ss_pred cCCCccccccC---cccCCCCCCcEEEccCCeec
Q 037111 354 LEKNQLIGNIS---DDFGIYPNLKLFDLSYNKFY 384 (964)
Q Consensus 354 L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~i~ 384 (964)
+++|+|+..+. ..+..++++..|++.+|+++
T Consensus 395 Ls~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 395 ASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 66666554321 22334466677777777765
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-22 Score=235.17 Aligned_cols=63 Identities=29% Similarity=0.365 Sum_probs=39.4
Q ss_pred cCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCc
Q 037111 420 QLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNM 487 (964)
Q Consensus 420 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 487 (964)
+|+.|++++|+|+. +|.. ..+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+
T Consensus 403 ~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 46666666666653 4432 235666777777776 566667777777777777777766554433
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5e-22 Score=216.42 Aligned_cols=166 Identities=22% Similarity=0.211 Sum_probs=129.9
Q ss_pred HHhhcccccceeecCCceeEEEEEeC--CCCeEEEEEeccccC---chhhHHHHHHHHHHHhCCCCCceee-EEeeeecC
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP--SGDTVAVKKLHSFTG---ETTHQKEFLSEIKALTGVRHRNIVK-FYGFCSHA 759 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~ 759 (964)
...++|+..+.||+|+||+||+|+.+ +++.||||++..... .......+.+|++++++++|+|+++ ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 34568999999999999999999764 577789998753211 2333567899999999999999985 4432
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccC-CCCCeEECCCCceEEeccCc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDV-SSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dl-kp~Nill~~~~~~kl~Dfg~ 838 (964)
+..|+||||++|++|... . . .. ...++.++++|++|||++ +|+|||| ||+||+++.++.+||+|||+
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~--~---~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-R--P---HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CCcEEEEEccCCCCHHHh-C--c---cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 457999999999999732 1 1 11 146788999999999999 9999999 99999999999999999999
Q ss_pred ccccCCCCCC--------ccccccccccccccccccC
Q 037111 839 AKLLKPDSSN--------WSELAGTYGYVAPELAYTM 867 (964)
Q Consensus 839 a~~~~~~~~~--------~~~~~g~~~y~aPE~~~~~ 867 (964)
|+........ .....+++.|+|||.+...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9876554321 1245678889999988643
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-22 Score=192.73 Aligned_cols=256 Identities=20% Similarity=0.301 Sum_probs=201.2
Q ss_pred hhcccccceeecCCceeEEEE-EeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 765 (964)
...|..+++||.|+||.+|.| ...+|.+||||.-.. .....++..|..+.+.++ ...|..+..+..++..-.+|
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~----~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS----KAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecc----cCCCcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 467999999999999999999 456899999998432 333456788999999887 47788888899999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC---CceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE---YEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~a~~~ 842 (964)
|+.. |.+|.+...-.. ..++..+++-.|.|++.-++|+|.+ ++|||||||+|+|+.-+ ..+.++|||+|+.+
T Consensus 90 MdLL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred eecc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhh
Confidence 9998 679999886544 3488899999999999999999999 99999999999999654 46899999999877
Q ss_pred CCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 843 KPDSSN-------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 843 ~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
.+.... .....||.+|.+-....+.+.+.+.|+-|+|.++.++-.|..||+.... ....+..+++
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka--------~tk~QKyEkI 236 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA--------ATKKQKYEKI 236 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch--------hhHHHHHHHH
Confidence 654322 2345799999998888888889999999999999999999999975433 1222334444
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
...+...+ .+.-....+.++...+..|-..--++-|+...+-+.+
T Consensus 237 ~EkK~s~~-ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlF 281 (341)
T KOG1163|consen 237 SEKKMSTP-IEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLF 281 (341)
T ss_pred HHhhcCCC-HHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHH
Confidence 44443322 2233445566788888899888888999877665544
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-21 Score=194.34 Aligned_cols=254 Identities=19% Similarity=0.284 Sum_probs=197.9
Q ss_pred cccccceeecCCceeEEEEE-eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 767 (964)
.|.++++||+|.||+++.|+ +-++++||||.=.. .....++..|....+.+. .+.|..++-+...+.+-.+|+|
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr----kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR----KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc----cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 58999999999999999994 45799999997432 223356778999888885 7999999988888889999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-----ceEEeccCccccc
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-----EAHVSDFGTAKLL 842 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-----~~kl~Dfg~a~~~ 842 (964)
.. |.||.|+.+-.+ ..++..++..+|.|++.-++|+|++ .+|.|||||+|+||...+ .+.++|||+|+.+
T Consensus 105 LL-GPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred hh-CcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 98 669999886544 4599999999999999999999999 999999999999997543 5899999999988
Q ss_pred CCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 843 KPDSSN-------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 843 ~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
.+.... .....||.+||+-....+.+.+.+.|+-|+|-++.+.+.|..||+.... ....+..+++
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA--------~tnK~kYeKI 251 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA--------DTNKEKYEKI 251 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC--------cchHHHHHHh
Confidence 766543 2345799999999999999999999999999999999999999974332 2223344444
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
=+.+...+ ..+-.+..+.++..-+.-.-+.+-++-|+.+.+.+.+
T Consensus 252 Ge~Kr~T~-i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf 296 (449)
T KOG1165|consen 252 GETKRSTP-IEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLF 296 (449)
T ss_pred ccccccCC-HHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 33222221 2333444555666666666667888888877665543
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.4e-21 Score=208.58 Aligned_cols=255 Identities=20% Similarity=0.261 Sum_probs=187.8
Q ss_pred cccccceeecCCceeEEEEEeCCC--CeEEEEEeccccCchhhHHHHHHHHHHHhCCC----CCceeeEEeee-ecCcee
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSG--DTVAVKKLHSFTGETTHQKEFLSEIKALTGVR----HRNIVKFYGFC-SHARHS 762 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~----h~niv~l~~~~-~~~~~~ 762 (964)
+|.+.+.||+|+||.||.|..... ..+|+|.......... ..+..|+.++..+. .+++..+++.. ..+...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 799999999999999999976543 4788887654322211 15667888877775 36899999999 477789
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-----CceEEeccC
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-----YEAHVSDFG 837 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-----~~~kl~Dfg 837 (964)
++||+.+ |.+|.++........++..+..+++.|++.+|++||+. |++||||||.|+.+... ..+.+.|||
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 9999988 66999988766667799999999999999999999999 99999999999999865 468999999
Q ss_pred cccccC--CCCC-------C-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCC
Q 037111 838 TAKLLK--PDSS-------N-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGAN 907 (964)
Q Consensus 838 ~a~~~~--~~~~-------~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~ 907 (964)
+++... .... . .....||.+|+++.+..+.+.+.+.|+||++.++.|+..|..||........
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~------- 245 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL------- 245 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-------
Confidence 998332 1111 0 1234599999999999999999999999999999999999999854332111
Q ss_pred hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 908 MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
............... . ....+..+.++...+-..+...+|....+.+.++
T Consensus 246 -~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~ 295 (322)
T KOG1164|consen 246 -KSKFEKDPRKLLTDR-F---GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLK 295 (322)
T ss_pred -HHHHHHHhhhhcccc-c---cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHH
Confidence 111111111111110 0 0112233444444555689999999998887763
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.1e-22 Score=229.26 Aligned_cols=252 Identities=19% Similarity=0.241 Sum_probs=188.0
Q ss_pred ccceeecCCceeEEEEEe-CCCCeEEEEEec----cccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 693 ESFCIGRGGYGSVYKAEL-PSGDTVAVKKLH----SFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~----~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
...++|.|++|.|+.... .....++.|.+. .......-...+..|+.+-..++|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 456799999998877743 334445555433 111111112226678888889999999988888877766666699
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||++ +|..++... ..+...++..+++|+..|++|+|++ ||.|||+|++|++++.+|.+||+|||.+..+.-+..
T Consensus 402 ~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9999 999999655 2377788889999999999999999 999999999999999999999999999987654432
Q ss_pred ----CccccccccccccccccccCCCCc-chhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc-cCCC
Q 037111 848 ----NWSELAGTYGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD-ARLP 921 (964)
Q Consensus 848 ----~~~~~~g~~~y~aPE~~~~~~~~~-~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 921 (964)
......|+..|+|||.+.+.+|++ ..||||.|+++..|.+|+.||........... ..... .+-.
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~---------~~~~~~~~~~ 546 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK---------TNNYSDQRNI 546 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh---------hhcccccccc
Confidence 234678899999999999999987 58999999999999999999976554322210 00000 0000
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...........+.+...++.+|+++||.+|-|+++|++
T Consensus 547 ~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 547 FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 11111223455666788999999999999999999976
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-22 Score=227.98 Aligned_cols=250 Identities=20% Similarity=0.234 Sum_probs=190.1
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHH--HhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKA--LTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++...+.+|.+.|=+|.+|++++|. |+||++.+.. .....+.|.++++- ...++|||++++.-+-..++..|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~-p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQD-PTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccC-CCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5777889999999999999998787 8999986532 22233444444433 555689999999998888888999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC--
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD-- 845 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 845 (964)
|+.+ +|+|.+..+.. +...+.+-|+.|++.|+..+|.. ||+|||||.+|||++....+.++||..-+...-+
T Consensus 102 yvkh-nLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHhh-hhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 9987 99999965543 56667778999999999999999 9999999999999999999999999876533211
Q ss_pred -CCCc----cccccccccccccccccCC-----------CCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCCh
Q 037111 846 -SSNW----SELAGTYGYVAPELAYTMK-----------VTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 846 -~~~~----~~~~g~~~y~aPE~~~~~~-----------~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~ 908 (964)
...+ .+......|+|||.+.... .+++.||||+||++.|+++ |++||+...-...........
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~ 255 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDP 255 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCH
Confidence 1122 2333455799999886421 5678999999999999998 688887655444333323334
Q ss_pred hHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
+..++++-+. .+++++..|++.||++|.++++.++.-+|
T Consensus 256 e~~Le~Ied~----------------~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 256 EQLLEKIEDV----------------SLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred HHHHHhCcCc----------------cHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 4444444222 36788999999999999999999987554
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=201.22 Aligned_cols=257 Identities=28% Similarity=0.418 Sum_probs=197.2
Q ss_pred ccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchh-hHHHHHHHHHHHhCCCCC-ceeeEEeeeecCceeEEEEEe
Q 037111 691 FDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETT-HQKEFLSEIKALTGVRHR-NIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 768 (964)
|.....||.|+||.||++... ..+++|.+........ ....+.+|+..++.+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667788999999999999876 7899999876443332 467899999999999988 799999999877788999999
Q ss_pred ccCCCHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccCcccccCCCC
Q 037111 769 LERGSLARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~ 846 (964)
+.++++.+++..... ..+.......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977755432 2588889999999999999999999 999999999999999998 79999999998655443
Q ss_pred C------Ccccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 847 S------NWSELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 847 ~------~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
. ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||...... .........+..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-------~~~~~~~~~~~~ 229 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-------SATSQTLKIILE 229 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-------ccHHHHHHHHHh
Confidence 2 2356689999999999987 57889999999999999999999996533221 011122222211
Q ss_pred cC---CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 AR---LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. ................+.+++..|+..+|..|.+..+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 230 LPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred cCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 11 1111100000222345778888999999999999877654
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.1e-21 Score=225.37 Aligned_cols=237 Identities=23% Similarity=0.415 Sum_probs=188.1
Q ss_pred eeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCccc
Q 037111 49 TWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI 128 (964)
Q Consensus 49 ~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~ 128 (964)
.|.-..|-. ..++.+++.+.+++ .+|....++|+.|+|++|+|+ .+|..+. ++|++|+|++|.|+ .+|..+
T Consensus 169 ~~r~~~Cl~-~~~~~L~L~~~~Lt----sLP~~Ip~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l 239 (754)
T PRK15370 169 VQRMRDCLK-NNKTELRLKILGLT----TIPACIPEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATL 239 (754)
T ss_pred HHHHHhhcc-cCceEEEeCCCCcC----cCCcccccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhh
Confidence 344445632 35678999888776 345455678999999999999 5777654 69999999999999 678765
Q ss_pred CCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchh
Q 037111 129 GLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYL 208 (964)
Q Consensus 129 ~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 208 (964)
. .+|+.|+|++|++...+..+. ++|+.|+|++|+++ .+|..+. ++|++|++++|+++ .+|..+. ++|+.|
T Consensus 240 ~--~~L~~L~Ls~N~L~~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L 309 (754)
T PRK15370 240 P--DTIQEMELSINRITELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHL 309 (754)
T ss_pred h--ccccEEECcCCccCcCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHH
Confidence 4 579999999999996544453 58999999999999 5787664 58999999999999 4676554 579999
Q ss_pred hcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 209 FLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 209 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
++++|.++. +|..+ .++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+
T Consensus 310 ~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt 380 (754)
T PRK15370 310 NVQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT 380 (754)
T ss_pred HhcCCcccc-CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC
Confidence 999999995 45443 3689999999999995 676553 78999999999998 5777663 68999999999999
Q ss_pred ccCCcccccCccccEEEeeCccCcccCCc
Q 037111 289 GHIPQEIGNFMNLNSLSVGGNQFTGFLPQ 317 (964)
Q Consensus 289 ~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 317 (964)
.+|..+. ..|+.|++++|+|+. +|.
T Consensus 381 -~LP~~l~--~sL~~LdLs~N~L~~-LP~ 405 (754)
T PRK15370 381 -NLPENLP--AALQIMQASRNNLVR-LPE 405 (754)
T ss_pred -CCCHhHH--HHHHHHhhccCCccc-Cch
Confidence 5666554 368999999999884 344
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-19 Score=182.32 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=108.1
Q ss_pred cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhh------------------------HHHHHHHHHHHhCCCCCce
Q 037111 694 SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTH------------------------QKEFLSEIKALTGVRHRNI 749 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~------------------------~~~~~~E~~~l~~l~h~ni 749 (964)
...||+|+||.||+|..++|++||||+++........ ......|+..+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999998888999999998653211111 1123458899999987776
Q ss_pred eeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEeccCCCCCeEECCC
Q 037111 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYM-HHECRPPIVHRDVSSKNVLLDFE 828 (964)
Q Consensus 750 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~iiH~dlkp~Nill~~~ 828 (964)
.....+.. ...++||||++|+++...... ..++++..+..++.|++.+++|+ |+. +|+||||||+||+++ +
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-C
Confidence 43333222 223899999999877655322 23588899999999999999999 688 999999999999998 5
Q ss_pred CceEEeccCccccc
Q 037111 829 YEAHVSDFGTAKLL 842 (964)
Q Consensus 829 ~~~kl~Dfg~a~~~ 842 (964)
+.++++|||+|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 78999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.9e-20 Score=184.97 Aligned_cols=172 Identities=13% Similarity=0.115 Sum_probs=133.0
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhh-H------HHHHHHHHHHhCCCCCceeeEEeeeecC-
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTH-Q------KEFLSEIKALTGVRHRNIVKFYGFCSHA- 759 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-~------~~~~~E~~~l~~l~h~niv~l~~~~~~~- 759 (964)
-++|+..+.+|.|+||.||.+.. ++..+|||.+.......+. . ..+.+|+..+.++.||+|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 46899999999999999999866 5778999999754322221 1 2268999999999999999999886543
Q ss_pred -------ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceE
Q 037111 760 -------RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH 832 (964)
Q Consensus 760 -------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~k 832 (964)
+..++||||++|.+|.++.. .+. ....++++++..+|.. +++|||++|+||+++.++ ++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EE
Confidence 35789999999999988731 222 2456999999999999 999999999999999988 99
Q ss_pred EeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHH
Q 037111 833 VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 886 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~ 886 (964)
++|||........... ..+.....+..++|+||||+.+....
T Consensus 175 liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999988655322111 11333445667899999999986654
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-19 Score=184.48 Aligned_cols=194 Identities=21% Similarity=0.318 Sum_probs=137.6
Q ss_pred CCCceeeEEeeeec---------------------------CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHH
Q 037111 745 RHRNIVKFYGFCSH---------------------------ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG 797 (964)
Q Consensus 745 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 797 (964)
+|||||++.++|.+ ...+|+||..++. +|.+|+..+. .+.....-|+.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC---CchHHHHHHHHH
Confidence 59999999988732 2357999999876 9999996654 344556668999
Q ss_pred HHHHHHHHhhCCCCCeEeccCCCCCeEEC--CCC--ceEEeccCcccccCCC------CCCccccccccccccccccccC
Q 037111 798 VAHALSYMHHECRPPIVHRDVSSKNVLLD--FEY--EAHVSDFGTAKLLKPD------SSNWSELAGTYGYVAPELAYTM 867 (964)
Q Consensus 798 i~~~l~~LH~~~~~~iiH~dlkp~Nill~--~~~--~~kl~Dfg~a~~~~~~------~~~~~~~~g~~~y~aPE~~~~~ 867 (964)
+++|+.|||.+ ||.|||+|.+||++. +|+ ...|+|||++---... .+......|....||||+....
T Consensus 350 lLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 99999999999 999999999999993 333 5789999987432221 1112234577789999998754
Q ss_pred C------CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHH
Q 037111 868 K------VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVAL 941 (964)
Q Consensus 868 ~------~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 941 (964)
+ --.++|.|+.|.+.||+++...||.......-. ...-....+|+ ..+.++..+.+++.
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~----------~r~Yqe~qLPa-----lp~~vpp~~rqlV~ 491 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD----------TRTYQESQLPA-----LPSRVPPVARQLVF 491 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec----------hhhhhhhhCCC-----CcccCChHHHHHHH
Confidence 3 124899999999999999999998642221000 00011122222 12345556788999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 037111 942 SCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 942 ~cl~~dp~~RPs~~evl~~ 960 (964)
..++.||.+|++..-....
T Consensus 492 ~lL~r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 492 DLLKRDPSKRVSPNIAANV 510 (598)
T ss_pred HHhcCCccccCCccHHHhH
Confidence 9999999999997654443
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=171.58 Aligned_cols=186 Identities=11% Similarity=0.042 Sum_probs=140.0
Q ss_pred ccccceeecCCceeEEEEEeCCCCeEEEEEeccccC--chhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEEE
Q 037111 691 FDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTG--ETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 767 (964)
+.....|++|+||+||.+.. .+.+++.+.+..... .......+.+|+++++++. |+++++++++ ...+++||
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred cccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 34567899999999998876 578888777653221 1111225789999999995 5889999886 34699999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccC-CCCCeEECCCCceEEeccCcccccCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDV-SSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dl-kp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
|++|.+|.+.... ....++.|++++++++|++ ||+|||| ||+||+++.++.++|+|||+|.......
T Consensus 79 yI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 79 YLAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred eecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 9999998764321 1135778999999999999 9999999 7999999999999999999998655443
Q ss_pred CC-----cc--------cccccccccccccccc-CCCC-cchhHHHHHHHHHHHHhCCCCCC
Q 037111 847 SN-----WS--------ELAGTYGYVAPELAYT-MKVT-EKCDVYSFGVLALEVIKGQHPKD 893 (964)
Q Consensus 847 ~~-----~~--------~~~g~~~y~aPE~~~~-~~~~-~~sDvwSlGvll~el~tg~~p~~ 893 (964)
.. .. -...++.|++|+...- ...+ .+.+.++-|.-+|.++|++.|..
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 21 00 1225677777775432 1233 57899999999999999998854
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.7e-20 Score=203.58 Aligned_cols=235 Identities=27% Similarity=0.345 Sum_probs=187.0
Q ss_pred eeecCCceeEEEEE----eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEEEecc
Q 037111 696 CIGRGGYGSVYKAE----LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVYEYLE 770 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 770 (964)
.+|+|+||.|+.++ ...|.-||.|..++.............|..++...+ ||.+|++.-.++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999873 335777999988765443333335667888888887 9999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcc
Q 037111 771 RGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850 (964)
Q Consensus 771 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 850 (964)
||++...+.... .+.......+...++-|++++|+. +++|||+|++||+++.+|++++.|||.++..-.....
T Consensus 81 gg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-- 153 (612)
T ss_pred cchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc--
Confidence 999998885443 366777788889999999999999 9999999999999999999999999999866544333
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchH
Q 037111 851 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE 930 (964)
Q Consensus 851 ~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (964)
+||..|||||++. ....++|.||||++++||+||..||.. +.+..+.....+.+ .
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---------------~~~~~Il~~~~~~p------~ 208 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---------------DTMKRILKAELEMP------R 208 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---------------HHHHHHhhhccCCc------h
Confidence 8999999999988 578899999999999999999999852 45555555444433 3
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCH--HHHHHHhc
Q 037111 931 DKLKSIIEVALSCVDANPERRPNM--QIVCKLLS 962 (964)
Q Consensus 931 ~~~~~l~~li~~cl~~dp~~RPs~--~evl~~L~ 962 (964)
........++..+...+|..|.-. +.+.+..+
T Consensus 209 ~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~ 242 (612)
T KOG0603|consen 209 ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQ 242 (612)
T ss_pred hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhc
Confidence 444556666778888999998865 44544443
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=175.66 Aligned_cols=142 Identities=19% Similarity=0.207 Sum_probs=110.7
Q ss_pred cceeecCCceeEEEEEeCCCCeEEEEEeccccCchh------------------------hHHHHHHHHHHHhCCCCCce
Q 037111 694 SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETT------------------------HQKEFLSEIKALTGVRHRNI 749 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------------------------~~~~~~~E~~~l~~l~h~ni 749 (964)
...||+|++|.||+|...+|+.||||++........ ....+..|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 467999999999999877899999999875321100 01224578899999999987
Q ss_pred eeEEeeeecCceeEEEEEeccCCCHHHH-hhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECC
Q 037111 750 VKFYGFCSHARHSFLVYEYLERGSLARI-LSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 750 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~ 827 (964)
.....+... ..++||||++|+++... +.. .+++.....+++.|++.++.++|+ . +|+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-
Confidence 544444332 24899999998865443 322 346778889999999999999999 8 999999999999999
Q ss_pred CCceEEeccCcccccCC
Q 037111 828 EYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 828 ~~~~kl~Dfg~a~~~~~ 844 (964)
++.++++|||++.....
T Consensus 153 ~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CCCEEEEEcccceecCC
Confidence 89999999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.8e-19 Score=183.16 Aligned_cols=234 Identities=18% Similarity=0.252 Sum_probs=150.2
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCC----------CceeeEEeeee
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRH----------RNIVKFYGFCS 757 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 757 (964)
.+..++.||.|+++.||.+++. +++++|||++.... ......+.+++|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4566788999999999999765 58999999886433 233345677777655554322 12222222221
Q ss_pred ---------cC---c-----eeEEEEEeccCCCHHHHhhh---cCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEe
Q 037111 758 ---------HA---R-----HSFLVYEYLERGSLARILSS---ETA--TEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815 (964)
Q Consensus 758 ---------~~---~-----~~~lv~e~~~~gsL~~~l~~---~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH 815 (964)
.. . ..+++|+-+.+ ||.+++.. ... ..+....+..+..|+++.+++||+. |+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 11 1 23678888865 99888653 221 1233445567779999999999999 9999
Q ss_pred ccCCCCCeEECCCCceEEeccCcccccCCCCCCccccccccccccccccccC--------CCCcchhHHHHHHHHHHHHh
Q 037111 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM--------KVTEKCDVYSFGVLALEVIK 887 (964)
Q Consensus 816 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~--------~~~~~sDvwSlGvll~el~t 887 (964)
+||+|+|++++.+|.++++||+.....+.. ......+..|.+||..... .++++.|.|++|+++|.|.+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~---~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTR---YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEE---EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCce---eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 999999999999999999999877654322 1113445779999976542 47889999999999999999
Q ss_pred CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCC
Q 037111 888 GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERR 951 (964)
Q Consensus 888 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 951 (964)
|+.||+.......... ......+.++.+..+|..+++++|++|
T Consensus 246 ~~lPf~~~~~~~~~~~---------------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW---------------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG---------------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc---------------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999986543221100 011122667778899999999999988
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.6e-21 Score=172.82 Aligned_cols=156 Identities=33% Similarity=0.501 Sum_probs=94.5
Q ss_pred cCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEE
Q 037111 105 GNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGL 184 (964)
Q Consensus 105 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 184 (964)
.+++.++.|.||+|.++ .+|+.+..|.+|+.|++++|++...+++++++++|++|+++-|++. ..|..||.++.|+.|
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 34555666666666666 5566666666666666666666666666666666666666666665 566666666666666
Q ss_pred EEecCCCC-CCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecccccc
Q 037111 185 YLYNNSLP-GSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQL 263 (964)
Q Consensus 185 ~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 263 (964)
||.+|++. ..+|..|..++.|+.|+|++|.+. .+|..++.+++|+.|.+..|.+- .+|..++.++.|++|.+.+|++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 66666664 234555555555555555555555 44555555555555555555555 4555555555555555555555
Q ss_pred c
Q 037111 264 R 264 (964)
Q Consensus 264 ~ 264 (964)
+
T Consensus 186 ~ 186 (264)
T KOG0617|consen 186 T 186 (264)
T ss_pred e
Confidence 5
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-20 Score=172.28 Aligned_cols=166 Identities=31% Similarity=0.506 Sum_probs=145.5
Q ss_pred cCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcch
Q 037111 128 IGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVY 207 (964)
Q Consensus 128 ~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 207 (964)
+..+.+...|.||+|+++..+|.+..+.+|+.|++++|+++ .+|.+++.+++|+.|+++-|++. ..|..|+.++.|+.
T Consensus 29 Lf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred ccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 34667788889999999999999999999999999999998 78899999999999999999998 78999999999999
Q ss_pred hhcccccccC-CccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccc
Q 037111 208 LFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQ 286 (964)
Q Consensus 208 L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 286 (964)
|||.+|++.. ..|..|..+..|+.|+|++|.+. .+|..++.+++|+.|.+..|.+- .+|..++.+..|++|++.+|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 9999998864 57888888999999999999998 88888999999999999999887 788889999999999999999
Q ss_pred ccccCCcccccC
Q 037111 287 LSGHIPQEIGNF 298 (964)
Q Consensus 287 l~~~~~~~~~~l 298 (964)
++ .+|..++++
T Consensus 185 l~-vlppel~~l 195 (264)
T KOG0617|consen 185 LT-VLPPELANL 195 (264)
T ss_pred ee-ecChhhhhh
Confidence 98 666666654
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3e-18 Score=189.59 Aligned_cols=209 Identities=28% Similarity=0.484 Sum_probs=161.0
Q ss_pred HhCCCCCceeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe-EeccCC
Q 037111 741 LTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI-VHRDVS 819 (964)
Q Consensus 741 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i-iH~dlk 819 (964)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.|.+.. ....+++.-...+.++|+.|++|+|+. +| +|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeec
Confidence 4678999999999999999999999999999999999976 345588889999999999999999988 55 999999
Q ss_pred CCCeEECCCCceEEeccCcccccCCC--CCCccccccccccccccccccCC-------CCcchhHHHHHHHHHHHHhCCC
Q 037111 820 SKNVLLDFEYEAHVSDFGTAKLLKPD--SSNWSELAGTYGYVAPELAYTMK-------VTEKCDVYSFGVLALEVIKGQH 890 (964)
Q Consensus 820 p~Nill~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~-------~~~~sDvwSlGvll~el~tg~~ 890 (964)
++|+++|....+|++|||+....... ........-..-|.|||.+.... .+.+.||||||++++|+++.+.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 99999999999999999998776431 11111122345699999987642 3667999999999999999999
Q ss_pred CCCccccccCCCCCCCChhHHHHhhhc-cC--CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 891 PKDLLSSLSDSSLPGANMNEAIDHMFD-AR--LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 891 p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
||+....... ..+.+..+.+ +. ..|.. ... .+....+..++.+||..+|++||++++|-..++
T Consensus 157 ~~~~~~~~~~-------~~eii~~~~~~~~~~~rP~i-~~~-~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~ 222 (484)
T KOG1023|consen 157 PFDLRNLVED-------PDEIILRVKKGGSNPFRPSI-ELL-NELPPELLLLVARCWEEIPEKRPSIEQIRSKLL 222 (484)
T ss_pred ccccccccCC-------hHHHHHHHHhcCCCCcCcch-hhh-hhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence 9975433221 1234444333 22 12221 111 144446889999999999999999999987764
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.4e-20 Score=206.37 Aligned_cols=276 Identities=24% Similarity=0.277 Sum_probs=153.0
Q ss_pred EEeccCCccc-cCCCccccCCCCcCeeecccCCccC----cCCcccCCCCcccEEEccccccCCc------c-cccCCCC
Q 037111 88 YLDLNENQLY-GNIPSPIGNLTKLKFLNLSSNHFSG----KIPSEIGLLTNLEVLHMFVNHLNGS------I-PEIGHLS 155 (964)
Q Consensus 88 ~L~l~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~l~~n~l~~~------~-~~~~~l~ 155 (964)
.|+|.+++++ +..+..+..++.|++|+|+++.++. .++..+...++|++|+++.+.+.+. + ..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3566666666 3345556666677777777777743 2555556666677777777666521 1 1245567
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCC---CcEEEEecCCCCC----CCCccccCC-CCcchhhcccccccCC----ccccc
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSS---LVGLYLYNNSLPG----SIPSSIGNL-SNLVYLFLKKNHLRGP----IPSSF 223 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~~~~~ 223 (964)
+|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 7777777777776555555544444 7777777777763 222334444 6666667776666632 22334
Q ss_pred cCccccceeeccccccCCC----Chhhhhcccccceeeccccccccc----cCCcccCccccceeecccccccccCCccc
Q 037111 224 GYLRKLTKLELSNNQLSGS----IPQEIGNLKLLTDLSLSQNQLRGT----VPSSLSNLSSLEILHLYDNQLSGHIPQEI 295 (964)
Q Consensus 224 ~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 295 (964)
..+++|++|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 4555666666666666632 222333445666666666666532 22334455566666666666553222222
Q ss_pred cc-----CccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccc----cCcc
Q 037111 296 GN-----FMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGN----ISDD 366 (964)
Q Consensus 296 ~~-----l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~----~~~~ 366 (964)
.. .+.|++|++++|.++.... ..+...+..+++|+.+++++|.++.. ....
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~--------------------~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~ 301 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGA--------------------KDLAEVLAEKESLLELDLRGNKFGEEGAQLLAES 301 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHH--------------------HHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHH
Confidence 11 2455555555555542110 12233444456667777777776644 2223
Q ss_pred cCCC-CCCcEEEccCCee
Q 037111 367 FGIY-PNLKLFDLSYNKF 383 (964)
Q Consensus 367 ~~~l-~~L~~L~Ls~N~i 383 (964)
+... +.|+.|++.+|.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 302 LLEPGNELESLWVKDDSF 319 (319)
T ss_pred HhhcCCchhhcccCCCCC
Confidence 3334 5677777776653
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.2e-20 Score=205.31 Aligned_cols=277 Identities=20% Similarity=0.219 Sum_probs=152.1
Q ss_pred eeeccccccc-ccCCcccccCccccEEEeeCccCccc----CCcccccCCcceEEEeecccccc------cccccccCCC
Q 037111 279 ILHLYDNQLS-GHIPQEIGNFMNLNSLSVGGNQFTGF----LPQNICQSGSLQYFSVHDNYFIG------SLPKTLRNCT 347 (964)
Q Consensus 279 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~L~l~~n~l~~------~~p~~l~~l~ 347 (964)
.|+|..+.++ ...+..+..+.+|+.|+++++.++.. ++..+...+.+++++++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4777788877 34556667777888888888887543 23333344556666666655441 2223344444
Q ss_pred cCCeeecCCCccccccCcccCCCCC---CcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCccc-ccCcE
Q 037111 348 SLERVRLEKNQLIGNISDDFGIYPN---LKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNA-TQLHE 423 (964)
Q Consensus 348 ~L~~L~L~~N~l~~~~~~~~~~l~~---L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~ 423 (964)
+|+.|++++|.+....+..+..+.+ |+.|++++|++++... ..+...+..+ ++|++
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~--------------------~~l~~~l~~~~~~L~~ 141 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGL--------------------RLLAKGLKDLPPALEK 141 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHH--------------------HHHHHHHHhCCCCceE
Confidence 5555555555544333322222222 4444444444432110 0111122333 56666
Q ss_pred EeccCCccccc----CCccccccCCcceeecccccccCC----CchhhhccCCCCceecccCcccccc----CCCccccc
Q 037111 424 LDFSSNHLVGK----VPLELANLTSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRFSKSI----PGNMGYLL 491 (964)
Q Consensus 424 L~Ls~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~ 491 (964)
|++++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++.. +..+..++
T Consensus 142 L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~ 221 (319)
T cd00116 142 LVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLK 221 (319)
T ss_pred EEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccC
Confidence 66666666532 233344556677777777766632 2233444557777777777665332 23344566
Q ss_pred ccceecCCccccCccchhhhhc-----cccCCeecccCccccC----CCChhcccccccceeeccCCcCCCc----cccc
Q 037111 492 KLHYLNMSSNEFSQEIPIQLGK-----LVQLSELDLSHNLLRG----EIPPEICNLESLEKLNLSHNNLSGS----IPTN 558 (964)
Q Consensus 492 ~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~ 558 (964)
+|++|++++|.+++.....+.. .+.|+.|++++|.++. .+...+..+++|+.|++++|.++.. ....
T Consensus 222 ~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~ 301 (319)
T cd00116 222 SLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAES 301 (319)
T ss_pred CCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHH
Confidence 6777777777776543333332 2677777777777752 2233445556777777777777744 3334
Q ss_pred cccc-ccceEEEecCCcc
Q 037111 559 FENM-HGLLSIDISYNEL 575 (964)
Q Consensus 559 ~~~l-~~L~~l~ls~N~l 575 (964)
+... +.|+.+|+.+|++
T Consensus 302 ~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 302 LLEPGNELESLWVKDDSF 319 (319)
T ss_pred HhhcCCchhhcccCCCCC
Confidence 4444 5677777777654
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.6e-17 Score=162.60 Aligned_cols=137 Identities=17% Similarity=0.225 Sum_probs=105.0
Q ss_pred ccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-----CCCceeeEEeeeecCc---ee
Q 037111 691 FDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-----RHRNIVKFYGFCSHAR---HS 762 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~ 762 (964)
+.....||+|+||.||. +++....+||++.... ....+.+.+|+.+++.+ +||||++++|+++++. ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~--~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRG--DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccc--cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 44567899999999996 4433334799876422 22346789999999999 5799999999998863 33
Q ss_pred E-EEEEe--ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHH-HHHhhCCCCCeEeccCCCCCeEECCC----CceEEe
Q 037111 763 F-LVYEY--LERGSLARILSSETATEMDWSKRVNVIKGVAHAL-SYMHHECRPPIVHRDVSSKNVLLDFE----YEAHVS 834 (964)
Q Consensus 763 ~-lv~e~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~iiH~dlkp~Nill~~~----~~~kl~ 834 (964)
+ +|+|| +++|+|.+++... .+++. ..++.+++.++ +|||++ +|+||||||+||+++.. +.++|+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEE
Confidence 3 78999 5579999999653 25544 35677888777 999999 99999999999999743 479999
Q ss_pred ccCcc
Q 037111 835 DFGTA 839 (964)
Q Consensus 835 Dfg~a 839 (964)
||+.+
T Consensus 152 Dg~G~ 156 (210)
T PRK10345 152 DNIGE 156 (210)
T ss_pred ECCCC
Confidence 95433
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5e-17 Score=192.09 Aligned_cols=196 Identities=23% Similarity=0.261 Sum_probs=157.0
Q ss_pred HHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC---CCceeeEEeeeecCcee
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR---HRNIVKFYGFCSHARHS 762 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~ 762 (964)
.....|.+.+.+|+|+||.||+|...+|+.||+|+=+... .+ +|.=-.+++.+++ -+.|..+..+....+.-
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~---~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN---PW--EFYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC---ce--eeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 3456788999999999999999988789999999854321 11 1111112223333 34455666666667778
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-------CCceEEec
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-------EYEAHVSD 835 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-------~~~~kl~D 835 (964)
++|+||.+.|+|.+++. ....++|..+..++.|++..+++||.+ +||||||||+|+++.. ...++|+|
T Consensus 770 ~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred eeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEe
Confidence 99999999999999996 445589999999999999999999999 9999999999999943 24689999
Q ss_pred cCcccccC--CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 037111 836 FGTAKLLK--PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891 (964)
Q Consensus 836 fg~a~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p 891 (964)
||.+..+. ++...+...++|-.+-.+|...++++++++|-|.++.+++.|+.|++-
T Consensus 845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99997664 344567788899999999999999999999999999999999999864
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=165.84 Aligned_cols=144 Identities=22% Similarity=0.216 Sum_probs=111.3
Q ss_pred cccccceeecCCceeEEEEE--eCCCCeEEEEEeccccCch----------------------hhHHHHHHHHHHHhCCC
Q 037111 690 NFDESFCIGRGGYGSVYKAE--LPSGDTVAVKKLHSFTGET----------------------THQKEFLSEIKALTGVR 745 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~~----------------------~~~~~~~~E~~~l~~l~ 745 (964)
-|++.+.||+|++|.||+|. ..+|+.||+|+++...... .....+..|+..+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999997 5689999999986432110 01123568999999987
Q ss_pred CC--ceeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEeccCCCCC
Q 037111 746 HR--NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP-IVHRDVSSKN 822 (964)
Q Consensus 746 h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-iiH~dlkp~N 822 (964)
+. .+.+++++ ...++||||++|+++..+.... ..........++.|++.++++||+. + ++||||||+|
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYN 179 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhh
Confidence 53 34445543 2348999999998887664222 2355566788999999999999999 8 9999999999
Q ss_pred eEECCCCceEEeccCcccccC
Q 037111 823 VLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 823 ill~~~~~~kl~Dfg~a~~~~ 843 (964)
|+++ ++.++++|||.+....
T Consensus 180 Ili~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEEE-CCCEEEEEChhhhccC
Confidence 9999 8899999999987543
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.9e-16 Score=159.88 Aligned_cols=136 Identities=18% Similarity=0.295 Sum_probs=114.0
Q ss_pred ceeecCCceeEEEEEeCCCCeEEEEEeccccCc------hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 695 FCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE------TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+.||+|++|.||+|.. .|..|++|+....... ......+.+|+..+..+.|+++.....++.+.+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5689999999999987 6788999986532211 11224577899999999999988777777777888999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
++|++|.+++.... + .+..++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999985432 2 7788999999999999999 999999999999999 78999999998865
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-16 Score=158.93 Aligned_cols=140 Identities=21% Similarity=0.188 Sum_probs=109.5
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCch--------------------hhHHHHHHHHHHHhCCCCC-
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGET--------------------THQKEFLSEIKALTGVRHR- 747 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------~~~~~~~~E~~~l~~l~h~- 747 (964)
..|...+.||+|+||.||+|..++|+.||||++....... .....+..|+..+..+.|+
T Consensus 15 ~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 15 VVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred chhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3477788999999999999988889999999875322100 0112366788888888777
Q ss_pred -ceeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC
Q 037111 748 -NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD 826 (964)
Q Consensus 748 -niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~ 826 (964)
.++..++. ...++||||++|++|.+.... .....++.+++.++.++|+. +++||||+|+||+++
T Consensus 95 i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~ 159 (198)
T cd05144 95 FPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVD 159 (198)
T ss_pred CCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEc
Confidence 44555442 345899999999999776421 23457889999999999998 999999999999999
Q ss_pred CCCceEEeccCcccccC
Q 037111 827 FEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 827 ~~~~~kl~Dfg~a~~~~ 843 (964)
+++.++|+|||.+....
T Consensus 160 ~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 160 DDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCCcEEEEECCccccCC
Confidence 99999999999996544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.6e-17 Score=175.98 Aligned_cols=174 Identities=22% Similarity=0.378 Sum_probs=137.2
Q ss_pred ceeEEEEEeccCCCHHHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 760 RHSFLVYEYLERGSLARILSS-ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
.++|+.|++|...+|.+++.. ......++.....++.|++.|++| + +.+|+|+||.||+...+..+||+|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 357899999999999999963 444557788899999999999999 5 899999999999999999999999999
Q ss_pred ccccCCCC------CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHH
Q 037111 839 AKLLKPDS------SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEA 911 (964)
Q Consensus 839 a~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 911 (964)
........ .......||..||+||.+.+..|+.++||||+|++++|++. =..++ .....
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~--------------er~~t 468 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF--------------ERIAT 468 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH--------------HHHHh
Confidence 87665444 12345679999999999999999999999999999999997 22221 12345
Q ss_pred HHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 037111 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVC 958 (964)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl 958 (964)
...+.++.+|+........ =..++.+++++.|.+||++.++.
T Consensus 469 ~~d~r~g~ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 469 LTDIRDGIIPPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hhhhhcCCCChHHhhcCcH-----HHHHHHHhcCCCcccCchHHHHh
Confidence 5666677777553333222 13566799999999999665543
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.6e-16 Score=183.72 Aligned_cols=159 Identities=34% Similarity=0.539 Sum_probs=119.2
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcce
Q 037111 7 SNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHL 86 (964)
Q Consensus 7 ~~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L 86 (964)
....+|++||++||+++..+ . ..+|.+++|. ..+|.|.||.|+.... . ....+
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~-~--~~~W~g~~C~----p~~~~w~Gv~C~~~~~-----------~---------~~~~v 420 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLP-L--RFGWNGDPCV----PQQHPWSGADCQFDST-----------K---------GKWFI 420 (623)
T ss_pred ccCchHHHHHHHHHHhcCCc-c--cCCCCCCCCC----CcccccccceeeccCC-----------C---------CceEE
Confidence 34557899999999999643 2 2489865431 1234799999962110 0 01136
Q ss_pred eEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCC
Q 037111 87 SYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGN 165 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n 165 (964)
+.|+|++|.++|.+|..|+.|++|+.|+|++|.++|.+|..++.+++|++|+|++|+++|.+|. ++.+++|++|+|++|
T Consensus 421 ~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N 500 (623)
T PLN03150 421 DGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500 (623)
T ss_pred EEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC
Confidence 6788888889889999999999999999999999999998888888888888888888887775 778888888888888
Q ss_pred CCCCCCCCCCCCC-CCCcEEEEecCCCC
Q 037111 166 HLDGPIPVSIGNL-SSLVGLYLYNNSLP 192 (964)
Q Consensus 166 ~l~~~~p~~~~~l-~~L~~L~L~~N~l~ 192 (964)
+++|.+|..++.+ .++..+++.+|...
T Consensus 501 ~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 501 SLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred cccccCChHHhhccccCceEEecCCccc
Confidence 8888888777653 45667777777543
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.3e-16 Score=156.79 Aligned_cols=133 Identities=17% Similarity=0.321 Sum_probs=107.5
Q ss_pred eeecCCceeEEEEEeCCCCeEEEEEeccccCc------hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE------TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
.||+|+||.||+|.+ ++..|++|+....... ......+.+|+++++.++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999986 5788999986532111 112356778999999999887665555555666779999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
+|++|.+++..... .++.+++.++.++|+. +++|||++|.||+++ ++.+++.|||.+...
T Consensus 80 ~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGND---------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcHH---------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999998744211 7899999999999999 999999999999999 899999999998653
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.7e-15 Score=176.47 Aligned_cols=140 Identities=19% Similarity=0.260 Sum_probs=113.5
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEecccc-C-----chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFT-G-----ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
...|...+.||+|+||+||+|.+.. ..+++|+..... . .......+.+|+++++.++|++++....++.+...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLG-RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecC-ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3445678899999999999998764 445555432111 1 11223568899999999999999988888877778
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||++|++|.+++. ....++.++++++.|||+. +++|||+||+||++ .++.++++|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999999884 3467899999999999999 99999999999999 678999999999975
Q ss_pred c
Q 037111 842 L 842 (964)
Q Consensus 842 ~ 842 (964)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 3
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.7e-16 Score=179.51 Aligned_cols=209 Identities=23% Similarity=0.291 Sum_probs=145.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|+.++.|..|+||.||.++++ +.+++|+|+ .+.. .+.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~-------lilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQN-------LILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccc-------hhhhc--cccccCCccee-----------------
Confidence 47999999999999999999876 466788843 3211 11111 22222344433
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||-...++..+. ++.. ++.|++|+|+. +|+|||+||+|.+|+.=|++|++|||+++.......
T Consensus 136 ----gDc~tllk~~g~--lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ----GDCATLLKNIGP--LPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ----chhhhhcccCCC--Ccch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence 455555543333 3322 27899999999 999999999999999999999999999875432211
Q ss_pred C---------------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 848 N---------------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 848 ~---------------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
. ...++|||.|+|||++....|...+|+|++|+++||.+.|+.||... ..++.+
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd-----------tpeelf 267 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD-----------TPEELF 267 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC-----------CHHHHH
Confidence 0 13458999999999999999999999999999999999999997532 223444
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHH
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ 955 (964)
..++...+..+ +. .+..+.+..+++.+.++.+|.+|--..
T Consensus 268 g~visd~i~wp--E~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 268 GQVISDDIEWP--EE-DEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred hhhhhhhcccc--cc-CcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 44433322211 11 223334566777789999999997443
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-14 Score=147.47 Aligned_cols=139 Identities=20% Similarity=0.225 Sum_probs=98.5
Q ss_pred cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHH----------------------HHHHHHHHhCCCCC--ce
Q 037111 694 SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKE----------------------FLSEIKALTGVRHR--NI 749 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~----------------------~~~E~~~l~~l~h~--ni 749 (964)
.+.||+|+||+||+|...++++||||++............ ...|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999998888999999998643221111111 13455555555433 24
Q ss_pred eeEEeeeecCceeEEEEEeccCCCHHH-HhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECC
Q 037111 750 VKFYGFCSHARHSFLVYEYLERGSLAR-ILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 750 v~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~ 827 (964)
.+.+++ ...++||||++++++.. .+.... .. .....++.+++.++.++|. . +|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-
Confidence 444443 24589999999954321 111111 11 5667899999999999999 7 999999999999999
Q ss_pred CCceEEeccCcccccCC
Q 037111 828 EYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 828 ~~~~kl~Dfg~a~~~~~ 844 (964)
++.++++|||.+.....
T Consensus 150 ~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CCcEEEEECcccccccC
Confidence 99999999999975543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.7e-14 Score=138.01 Aligned_cols=135 Identities=17% Similarity=0.159 Sum_probs=114.2
Q ss_pred ccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC--CceeeEEeeeecCceeEEEEEecc
Q 037111 693 ESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH--RNIVKFYGFCSHARHSFLVYEYLE 770 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~ 770 (964)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+..++.++| ..++++++++...+..+++|||++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~ 76 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE 76 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC
Confidence 35679999999999998754 7899998764322 4578899999999976 589999999988888999999999
Q ss_pred CCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 771 RGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 771 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
++.+..+ +......++.+++++++++|.....+++|||++|+||++++.+.+++.|||.++.
T Consensus 77 g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 77 GETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 8777654 4566678899999999999987555799999999999999989999999998864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-15 Score=177.36 Aligned_cols=256 Identities=21% Similarity=0.272 Sum_probs=188.0
Q ss_pred hhcccccceeecCCceeEEEEEeC--CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP--SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 764 (964)
...|...+.||+|+|+.|-..... ....+|+|.+...............|..+-+.+. |+|++.+++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 346778888999999999887543 3445677766544323333445556777777776 9999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEeccCCCCCeEECCCC-ceEEeccCccccc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH-HECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLL 842 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~ 842 (964)
+++|..||++.+.+........+......++.|+..++.|+| .. ++.|+|+||+|.+++..+ ..+++|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 999999999999883222223555667789999999999999 77 999999999999999999 9999999999877
Q ss_pred CC-CCC--Ccccccc-ccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 843 KP-DSS--NWSELAG-TYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 843 ~~-~~~--~~~~~~g-~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
.. .+. ......| ++.|+|||...+.. ..+..|+||.|+++..+++|..|++............. ... .
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~------~~~-~ 248 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWK------SNK-G 248 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeec------ccc-c
Confidence 65 322 2335567 99999999998854 45689999999999999999999876554322111111 110 0
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVC 958 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl 958 (964)
..-..+ +........++..+++..+|+.|.+.+++.
T Consensus 249 ~~~~~~-----~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 249 RFTQLP-----WNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccccCc-----cccCChhhhhcccccccCCchhcccccccc
Confidence 000111 122233455667788889999999988764
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-15 Score=164.26 Aligned_cols=197 Identities=32% Similarity=0.500 Sum_probs=158.0
Q ss_pred cCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEE
Q 037111 105 GNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGL 184 (964)
Q Consensus 105 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 184 (964)
..++.-...||+.|++. ++|..+..+..|+.|.|+.|.+...++.+..+..|..|+|+.|+++ .+|..++.|+ |+.|
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 45666777888888888 7888888888888888888888877777888888888888888888 6788888877 8899
Q ss_pred EEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccc
Q 037111 185 YLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 264 (964)
-+++|+++ .+|..++.+..|..|+.+.|.+. .+|..++++.+|+.|.+..|++. .+|+.+..+ .|..||+|.|+++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis 224 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS 224 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee
Confidence 99999998 78888888888999999999988 56778888899999999999888 667777765 4888999999998
Q ss_pred cccCCcccCccccceeecccccccccCCccccc---CccccEEEeeCcc
Q 037111 265 GTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGN---FMNLNSLSVGGNQ 310 (964)
Q Consensus 265 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~---l~~L~~L~l~~N~ 310 (964)
.+|-.|.+|+.|++|-|.+|.+. ..|..+.- ..=.++|+..-++
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 78888889999999999999888 45555432 2334556655554
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.6e-13 Score=143.10 Aligned_cols=138 Identities=15% Similarity=0.239 Sum_probs=106.9
Q ss_pred cceee-cCCceeEEEEEeCCCCeEEEEEecccc-----------CchhhHHHHHHHHHHHhCCCCCce--eeEEeeeecC
Q 037111 694 SFCIG-RGGYGSVYKAELPSGDTVAVKKLHSFT-----------GETTHQKEFLSEIKALTGVRHRNI--VKFYGFCSHA 759 (964)
Q Consensus 694 ~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 759 (964)
...|| .|+.|+||.+... +..+|||++.... ........+.+|++.+..+.|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45688 8999999999885 7789999885311 011234567889999999988775 6677764432
Q ss_pred c----eeEEEEEeccC-CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 760 R----HSFLVYEYLER-GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 760 ~----~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
. ..++||||++| .+|.+++... +++.. .+.++++++.+||+. ||+||||||.|||++.++.++++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEE
Confidence 2 23599999997 6999988542 24433 357899999999999 99999999999999999999999
Q ss_pred ccCccccc
Q 037111 835 DFGTAKLL 842 (964)
Q Consensus 835 Dfg~a~~~ 842 (964)
|||.++..
T Consensus 185 Dfg~~~~~ 192 (239)
T PRK01723 185 DFDRGELR 192 (239)
T ss_pred ECCCcccC
Confidence 99988653
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-15 Score=164.15 Aligned_cols=203 Identities=29% Similarity=0.455 Sum_probs=176.7
Q ss_pred cCCCccCc----CcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc
Q 037111 75 LDQFPFSL----FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE 150 (964)
Q Consensus 75 l~~~~~~~----~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 150 (964)
+..+|++. +.+....||+.|++. .+|..+..+..|+.|.|+.|.|. .||..+++|..|.+|||+.|+++..++.
T Consensus 62 lk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS~lp~~ 139 (722)
T KOG0532|consen 62 LKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLSHLPDG 139 (722)
T ss_pred hhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhhcCChh
Confidence 34555554 456788999999998 79999999999999999999998 8999999999999999999999988877
Q ss_pred cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccc
Q 037111 151 IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT 230 (964)
Q Consensus 151 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 230 (964)
+..|+ |+.|.+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|.+..|++. .+|..+..|+ |.
T Consensus 140 lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li 214 (722)
T KOG0532|consen 140 LCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LI 214 (722)
T ss_pred hhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-ee
Confidence 76654 899999999999 78999999999999999999999 78999999999999999999999 4677777555 99
Q ss_pred eeeccccccCCCChhhhhcccccceeeccccccccccCCcccC---ccccceeeccccc
Q 037111 231 KLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSN---LSSLEILHLYDNQ 286 (964)
Q Consensus 231 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~---l~~L~~L~L~~N~ 286 (964)
.||+|.|+++ .+|-.|..|+.|++|-|.+|.|. ..|..++- ..=-++|+..-++
T Consensus 215 ~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 215 RLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred eeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 9999999999 89999999999999999999998 66766543 2334667776664
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1e-13 Score=164.52 Aligned_cols=118 Identities=33% Similarity=0.584 Sum_probs=95.1
Q ss_pred ccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEec
Q 037111 492 KLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDIS 571 (964)
Q Consensus 492 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls 571 (964)
.++.|+|++|.+++.+|..++.+++|+.|+|++|+++|.+|..+..+++|+.|+|++|+|+|.+|..+.++++|+.|||+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCcccccCCCCc--cCCCCCcccccCCCCccCCCCCCcccc
Q 037111 572 YNELDGPIPSIE--AFRHAPVEALQGNKGLCGEVSGLQPCK 610 (964)
Q Consensus 572 ~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~~~~l~~~~ 610 (964)
+|+++|.+|..- .+.+.....+.+|+++||.+ ++..|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p-~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP-GLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC-CCCCCc
Confidence 888888888532 11233345688999999854 456663
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.7e-13 Score=154.38 Aligned_cols=197 Identities=38% Similarity=0.555 Sum_probs=111.4
Q ss_pred eeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCC-CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCC
Q 037111 112 FLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLS-SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNS 190 (964)
Q Consensus 112 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 190 (964)
.|+++.|.+. ..+..+..++.++.|++.+|.++...+..+.++ +|+.|++++|++. .+|..++.+++|+.|++++|+
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccccCccccccchhhcccccccccchh-hhhhhhhccccccccccCCch
Confidence 4666666654 223334445566666666666665555555553 6666666666666 444556666666666666666
Q ss_pred CCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCc
Q 037111 191 LPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSS 270 (964)
Q Consensus 191 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 270 (964)
++ .+|...+.+++|+.|++++|+++ .+|.....+..|++|++++|.+. ..+..+..++++..|.+.+|++. .++..
T Consensus 175 l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~ 250 (394)
T COG4886 175 LS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPES 250 (394)
T ss_pred hh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccch
Confidence 66 44544445566666666666666 34444444455666666666433 33445555666666666666655 33455
Q ss_pred ccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCC
Q 037111 271 LSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLP 316 (964)
Q Consensus 271 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 316 (964)
+..++++++|++++|+++. ++. ++.+.+++.|++++|.+....|
T Consensus 251 ~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 251 IGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hccccccceeccccccccc-ccc-ccccCccCEEeccCccccccch
Confidence 5555666666666666652 322 5555566666666665554443
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.2e-13 Score=152.73 Aligned_cols=148 Identities=40% Similarity=0.551 Sum_probs=74.1
Q ss_pred EEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCC-CCcEEEEecCCCCCCCCccccCCCCcchhhccccc
Q 037111 136 VLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLS-SLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNH 214 (964)
Q Consensus 136 ~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 214 (964)
.|+++.|.+...+..+..++.++.|++.+|+++ .+|...+.++ +|+.|++++|++. .+|..++.+++|+.|++++|+
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCch
Confidence 466666666544444555556666666666666 4455555553 5666666666655 444445555555555555555
Q ss_pred ccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 215 LRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 215 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
++. +|...+.++.|+.|++++|+++ .+|..+..+..|++|.+++|.+. ..+..+.++.++..|.+.+|++.
T Consensus 175 l~~-l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~ 245 (394)
T COG4886 175 LSD-LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE 245 (394)
T ss_pred hhh-hhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee
Confidence 552 3333334455555555555555 33433333344445555544322 23333444444444444444443
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.4e-12 Score=143.85 Aligned_cols=142 Identities=18% Similarity=0.232 Sum_probs=99.2
Q ss_pred ceeecCCceeEEEEEeCCCCeEEEEEeccccCchhh--------------------------------------HHHHHH
Q 037111 695 FCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTH--------------------------------------QKEFLS 736 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~--------------------------------------~~~~~~ 736 (964)
+.||.|++|.||+|++++|+.||||+.+........ .-.|..
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 679999999999999999999999997532100000 012444
Q ss_pred HHHHHhCC----C-CCceeeEEeee-ecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHH-HHHHHhhCC
Q 037111 737 EIKALTGV----R-HRNIVKFYGFC-SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH-ALSYMHHEC 809 (964)
Q Consensus 737 E~~~l~~l----~-h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~-~l~~LH~~~ 809 (964)
|+..+.++ + ++++ .+-..+ ...+..++||||++|++|.++....... . ...+++..++. .+..+|..
T Consensus 203 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~---~~~~ia~~~~~~~l~ql~~~- 276 (437)
T TIGR01982 203 EAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG-L---DRKALAENLARSFLNQVLRD- 276 (437)
T ss_pred HHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhcC-C---CHHHHHHHHHHHHHHHHHhC-
Confidence 55555444 2 3333 222222 2345679999999999999886532211 2 23456666665 46788888
Q ss_pred CCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 810 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|++|+|++|.||+++.++.++++|||++..+.+
T Consensus 277 --g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 277 --GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred --CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 999999999999999999999999999976653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.7e-12 Score=144.04 Aligned_cols=248 Identities=24% Similarity=0.233 Sum_probs=181.5
Q ss_pred cccccceeec--CCceeEEEEEe---CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeE
Q 037111 690 NFDESFCIGR--GGYGSVYKAEL---PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 690 ~~~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 763 (964)
.|.....+|. |.+|.||.+.. .++..+|+|+-+...........=.+|+...+.++ |++.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4666778999 99999999955 46888999985433332233333456777777775 999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHH----HHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccCc
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGT 838 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~ 838 (964)
+-+|++. .++.++.+.... .++...++.+..+..+ |+.++|+. +++|-|+||.||+...+ ...+++|||.
T Consensus 195 iqtE~~~-~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeecccc-chhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcce
Confidence 9999995 699988865432 2667778888888888 99999999 99999999999999999 8899999999
Q ss_pred ccccCCCCCCcc-----ccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 839 AKLLKPDSSNWS-----ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 839 a~~~~~~~~~~~-----~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
...+....-... ...|...|++||...+ .++..+|+|++|.++.+-.++..+...... ..+.+..
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~--~~W~~~r------- 339 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN--SSWSQLR------- 339 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC--CCccccc-------
Confidence 887776542221 2257788999998765 488999999999999999988765321100 0111100
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...++.+ .......++...+..|++.+|-.|++++.+..
T Consensus 340 ---~~~ip~e----~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 340 ---QGYIPLE----FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ---cccCchh----hhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0111211 11122233445788999999999999988764
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.8e-12 Score=130.02 Aligned_cols=198 Identities=21% Similarity=0.349 Sum_probs=136.7
Q ss_pred HHhCCCCCceeeEEeeeecCc-----eeEEEEEeccCCCHHHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 037111 740 ALTGVRHRNIVKFYGFCSHAR-----HSFLVYEYLERGSLARILSSETA--TEMDWSKRVNVIKGVAHALSYMHHECRPP 812 (964)
Q Consensus 740 ~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ 812 (964)
-+-++.|.|+|+++.|+.+.+ ...++.|||..|++..++++..+ ..+......+|+.||..||.|||+. .+.
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 344567999999999986643 47899999999999999986332 3456667779999999999999997 679
Q ss_pred eEeccCCCCCeEECCCCceEEeccCcccccCCCCC-----CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh
Q 037111 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS-----NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK 887 (964)
Q Consensus 813 iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t 887 (964)
|+|+++..+-|++..+|-+|++--.-. ....... ....-.+-++|.+||+-.....+.++|||+||....||.-
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred cccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 999999999999999998887532211 1111100 0112245689999998777777889999999999999988
Q ss_pred CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 037111 888 GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVC 958 (964)
Q Consensus 888 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl 958 (964)
+..--... + .....++.+....-.--.+. =...+.+|++..|..||+|++.+
T Consensus 278 lEiq~tns---e----S~~~~ee~ia~~i~~len~l------------qr~~i~kcl~~eP~~rp~ar~ll 329 (458)
T KOG1266|consen 278 LEIQSTNS---E----SKVEVEENIANVIIGLENGL------------QRGSITKCLEGEPNGRPDARLLL 329 (458)
T ss_pred heeccCCC---c----ceeehhhhhhhheeeccCcc------------ccCcCcccccCCCCCCcchhhhh
Confidence 76431100 0 11111222222211111100 12456689999999999999875
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.1e-11 Score=138.14 Aligned_cols=145 Identities=15% Similarity=0.194 Sum_probs=92.7
Q ss_pred hhcccccceeecCCceeEEEEEeCC-CCeEEEEEeccccCch--------------------------------hhHH--
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTGET--------------------------------THQK-- 732 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--------------------------------~~~~-- 732 (964)
...|+. +.||.|++|.||+|++++ |+.||||+.+...... +-.+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999999987 9999999986421000 0011
Q ss_pred ----HHHHHHHHHhCC----CCCceeeEEeeeec-CceeEEEEEeccCCCHHHHh--hhcCCC--CCCHHHHHHHHHHHH
Q 037111 733 ----EFLSEIKALTGV----RHRNIVKFYGFCSH-ARHSFLVYEYLERGSLARIL--SSETAT--EMDWSKRVNVIKGVA 799 (964)
Q Consensus 733 ----~~~~E~~~l~~l----~h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l--~~~~~~--~l~~~~~~~i~~~i~ 799 (964)
++.+|+..+.++ .+...+.+-.++.+ .+..++||||++|+.+.++- ...+.. .+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 133444443333 23333333333322 45678999999999998753 222110 12222223333333
Q ss_pred HHHHHHhhCCCCCeEeccCCCCCeEECCCC----ceEEeccCcccccC
Q 037111 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEY----EAHVSDFGTAKLLK 843 (964)
Q Consensus 800 ~~l~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~a~~~~ 843 (964)
... |++|+|+||.||+++.++ .+++.|||+.....
T Consensus 277 ------f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ------FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 335 999999999999999988 99999999986554
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-10 Score=130.67 Aligned_cols=168 Identities=19% Similarity=0.233 Sum_probs=129.2
Q ss_pred EeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCH
Q 037111 709 ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDW 788 (964)
Q Consensus 709 ~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~ 788 (964)
+..++.+|.|..++...+ .......+-+..++.++||||+++++.++.+++.|+|+|.+. .|..+++..+ .
T Consensus 33 ~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-----~ 103 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-----K 103 (690)
T ss_pred eeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-----H
Confidence 445788999998875443 444567788889999999999999999999999999999984 6888886544 4
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCccccccccccccccccccCC
Q 037111 789 SKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMK 868 (964)
Q Consensus 789 ~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~ 868 (964)
..+...+.||+.||.+||..+ +++|++|.-..|+++..|..||++|.++..............---.|..|+.+....
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~ 181 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE 181 (690)
T ss_pred HHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc
Confidence 566678899999999998665 899999999999999999999999988754332221111111222466676543322
Q ss_pred CCcchhHHHHHHHHHHHHhCC
Q 037111 869 VTEKCDVYSFGVLALEVIKGQ 889 (964)
Q Consensus 869 ~~~~sDvwSlGvll~el~tg~ 889 (964)
-..|.|-||+++||++.|.
T Consensus 182 --~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 --WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred --cchhhhhHHHHHHHHhCcc
Confidence 3479999999999999983
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.4e-12 Score=146.62 Aligned_cols=218 Identities=28% Similarity=0.309 Sum_probs=144.2
Q ss_pred CcceeEEeccCCccccCCCccc-cCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEE
Q 037111 83 FSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLA 161 (964)
Q Consensus 83 ~~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~ 161 (964)
.+.++.++...+.+.+. ..+ ..+..++.+++..|.+. .+-..+..+++|+.|++..|++......+..+++|++|+
T Consensus 48 ~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ 124 (414)
T KOG0531|consen 48 PSDLEEIDLIFNLDGSD--EDLVESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLD 124 (414)
T ss_pred cchhhhhcchhccccch--hhhHHHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhcccchhhhhcchhee
Confidence 34555666665554432 112 45677777778888877 344456777888888888888876554467788888888
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCcc-ccccCccccceeeccccccC
Q 037111 162 LDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIP-SSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 162 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 240 (964)
|++|.|+.. ..+..++.|+.|++++|.|+.. ..+..+.+|+.+++++|+++...+ . ...+.+++.+++.+|.+.
T Consensus 125 ls~N~I~~i--~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 125 LSFNKITKL--EGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred ccccccccc--cchhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh
Confidence 888888754 3456667788888888888732 345567788888888888875544 2 466777888888888876
Q ss_pred CCChhhhhcccccceeeccccccccccCCcccCccc--cceeecccccccccCCcccccCccccEEEeeCccCcc
Q 037111 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSS--LEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
.. ..+..+..+..+++..|.++..-+ +..+.. |+.+++++|++. .++..+..+.++..|++..|++..
T Consensus 200 ~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~ 269 (414)
T KOG0531|consen 200 EI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISN 269 (414)
T ss_pred cc--cchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhccccc
Confidence 33 344555566666777787773222 222333 777788888776 343556666777777777776653
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.7e-11 Score=117.47 Aligned_cols=130 Identities=19% Similarity=0.173 Sum_probs=95.2
Q ss_pred cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCce-eeEEeeeecCceeEEEEEeccCC
Q 037111 694 SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNI-VKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.+.++.|.++.||+++.. ++.|++|....... ....+..|+..++.+.+..+ .+++.+.. ...++||||++|.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~ 76 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGS 76 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCC
Confidence 356899999999999875 78899998754221 12345678888888765444 44555433 3458999999998
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC--RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
++.+. . . ....++.+++++++.||+.. ..+++|||++|.||+++ ++.++++|||.+.
T Consensus 77 ~l~~~----~---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 77 ELLTE----D---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccccc----c---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 87643 0 1 11345678999999999982 12359999999999999 6789999999875
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.6e-12 Score=127.32 Aligned_cols=207 Identities=25% Similarity=0.271 Sum_probs=130.8
Q ss_pred CCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCC-CCCCCCCCCCCCCC
Q 037111 100 IPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDG-NHLDGPIPVSIGNL 178 (964)
Q Consensus 100 ~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l 178 (964)
+|-.+.-+++|+.+.+|.+.-. .|-+-...=+.|+++...+..++.. |.+-....+..+..+. .-.+|..-..+...
T Consensus 206 l~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~~~-~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTW 283 (490)
T KOG1259|consen 206 LSFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQDV-PSLLPETILADPSGSEPSTSNGSALVSADTW 283 (490)
T ss_pred cccchHHhhhhheeeeeccchh-heeceeecCchhheeeeeccccccc-ccccchhhhcCccCCCCCccCCceEEecchH
Confidence 4444555666666666665433 2222222335667766655544432 1111112222221111 12233333444455
Q ss_pred CCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeec
Q 037111 179 SSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSL 258 (964)
Q Consensus 179 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 258 (964)
+.|++||||+|.|+ .+.+++.-++.++.|++++|.|+.+ ..+..+++|+.||||+|.++ .+..+-..+-+.+.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 67888888888888 6677777788888888888888743 33778888888888888887 44455556778888888
Q ss_pred cccccccccCCcccCccccceeeccccccccc-CCcccccCccccEEEeeCccCccc
Q 037111 259 SQNQLRGTVPSSLSNLSSLEILHLYDNQLSGH-IPQEIGNFMNLNSLSVGGNQFTGF 314 (964)
Q Consensus 259 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~ 314 (964)
+.|.|.. + +.+..+-+|..||+++|+|... -...+++++-|+.+.|.+|.+.+.
T Consensus 360 a~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 360 AQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 8888873 2 3477788888888888888732 235677888888888888888754
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.2e-12 Score=125.20 Aligned_cols=133 Identities=28% Similarity=0.320 Sum_probs=86.8
Q ss_pred cCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeec
Q 037111 442 LTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELD 521 (964)
Q Consensus 442 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 521 (964)
...|++|+|++|.|+ .+.+...-++.++.|++|+|.|... ++++.+.+|+.||||+|.++ .+-++-.+|.+++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 355667777777766 4555566667777777777776532 33666777777777777775 3444555667777777
Q ss_pred ccCccccCCCChhcccccccceeeccCCcCCCcc-cccccccccceEEEecCCcccccCC
Q 037111 522 LSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSI-PTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 522 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
|++|.|.. -..+..|-+|..||+++|+|.... -..++++|-|+.+.|.+|++.+.+.
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 77777752 234566677777777777776321 2456777777777788887777543
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.8e-12 Score=134.09 Aligned_cols=211 Identities=25% Similarity=0.270 Sum_probs=123.9
Q ss_pred cCCCcCCeeecCCCccccccC-cccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCc
Q 037111 344 RNCTSLERVRLEKNQLIGNIS-DDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLH 422 (964)
Q Consensus 344 ~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 422 (964)
+++.+|+.+.|.+..+..... .....+++++.||||.|-|....+ +-.....+++|+
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~----------------------v~~i~eqLp~Le 175 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFP----------------------VLKIAEQLPSLE 175 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHH----------------------HHHHHHhcccch
Confidence 345566666666666543322 234456666667776666543211 111234556666
Q ss_pred EEeccCCcccccCCccc-cccCCcceeecccccccC-CCchhhhccCCCCceecccCccccccCCCcccccccceecCCc
Q 037111 423 ELDFSSNHLVGKVPLEL-ANLTSLNDLILNGNQLSG-GIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500 (964)
Q Consensus 423 ~L~Ls~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 500 (964)
.|+||.|++........ ..+++|+.|.|+.|.++. .+......+++|+.|+|.+|...........-+..|+.|||++
T Consensus 176 ~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~ 255 (505)
T KOG3207|consen 176 NLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSN 255 (505)
T ss_pred hcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccC
Confidence 66777766652222211 245788888888888872 2233445678888888888853333334445567788888888
Q ss_pred cccCccc-hhhhhccccCCeecccCccccCCC-Chh-----cccccccceeeccCCcCCCc-ccccccccccceEEEecC
Q 037111 501 NEFSQEI-PIQLGKLVQLSELDLSHNLLRGEI-PPE-----ICNLESLEKLNLSHNNLSGS-IPTNFENMHGLLSIDISY 572 (964)
Q Consensus 501 N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~-~~~-----~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~l~ls~ 572 (964)
|++-... -...+.++.|+.|+++.+.+...- |+. ...+++|+.|+++.|+|... .-+.+..+++|+.|....
T Consensus 256 N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~ 335 (505)
T KOG3207|consen 256 NNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITL 335 (505)
T ss_pred CcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccc
Confidence 8875432 134677888888888888887532 222 24567888888888887522 112333444455555545
Q ss_pred Cccc
Q 037111 573 NELD 576 (964)
Q Consensus 573 N~l~ 576 (964)
|.|+
T Consensus 336 n~ln 339 (505)
T KOG3207|consen 336 NYLN 339 (505)
T ss_pred cccc
Confidence 4443
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-11 Score=135.74 Aligned_cols=245 Identities=20% Similarity=0.194 Sum_probs=172.8
Q ss_pred hhcccccceeecCCceeEEEEEe--CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL--PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (964)
..+|..+..||.|.|+.|+.... .++..|++|..............-..|+.+...+ .|.++++.+..+..-+..|+
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 45788999999999999999843 4678899998765433333333344566666655 49999999888888888889
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccCcccccC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLK 843 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~a~~~~ 843 (964)
--||++++++.... .....+++..++++..|++.++.++|+. .++|+|++|+||++..+ +..+++|||++..+.
T Consensus 344 p~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred chhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccccccc
Confidence 99999999887766 2333467778889999999999999998 99999999999999886 788999999886422
Q ss_pred CCCCCccccccccccc--cccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 844 PDSSNWSELAGTYGYV--APELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~--aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
-.. ....+.-+++ +|+......+..+.|++|||.-+.|.+++..--... .....+..+..+
T Consensus 419 ~~~---~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~--------------~~~~~i~~~~~p 481 (524)
T KOG0601|consen 419 FSS---GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG--------------VQSLTIRSGDTP 481 (524)
T ss_pred eec---ccccccccccccchhhccccccccccccccccccccccccCcccCccc--------------ccceeeeccccc
Confidence 111 1112223334 555555667888999999999999999986531100 001111222222
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~ 960 (964)
.. ......+..+...+..+++..||.+.+....
T Consensus 482 ~~------~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 482 NL------PGLKLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred CC------CchHHhhhhhhhhhcCCccccchhhhhhccc
Confidence 11 1122445566668889999999998776543
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.9e-12 Score=142.80 Aligned_cols=218 Identities=28% Similarity=0.370 Sum_probs=172.4
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLA 161 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~ 161 (964)
.+..++.+++..|.+.. +-..+..+++|+.|++.+|.|. .+...+..+++|++|++++|+++... .+..++.|+.|+
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~-~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE-GLSTLTLLKELN 146 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc-chhhccchhhhe
Confidence 46677888888998874 4456888999999999999998 45554788999999999999998544 477788899999
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCcc-ccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 162 LDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS-IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 162 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
+++|.++.. ..+..+++|+.+++++|++...-+ . ...+.+++.+++.+|.+..+ ..+..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccce
Confidence 999999843 456669999999999999995433 2 57889999999999999843 45566777778899999988
Q ss_pred CCChhhhhccc--ccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCc
Q 037111 241 GSIPQEIGNLK--LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 241 ~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 312 (964)
...+ +..+. +|+.+++++|++. .++..+..+..+..|++.+|++... ..+.....+..+....|++.
T Consensus 222 ~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 222 KLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred eccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 4432 33333 3899999999998 4556788889999999999999743 33455667777777888766
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.3e-10 Score=110.89 Aligned_cols=138 Identities=17% Similarity=0.186 Sum_probs=98.3
Q ss_pred ceeecCCceeEEEEEeCC-------CCeEEEEEecccc-----------Cc---------hhhHHHHH----HHHHHHhC
Q 037111 695 FCIGRGGYGSVYKAELPS-------GDTVAVKKLHSFT-----------GE---------TTHQKEFL----SEIKALTG 743 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-----------~~---------~~~~~~~~----~E~~~l~~ 743 (964)
..||.|--+.||.|...+ +..+|||+.+... ++ ....+.+. +|+..+++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999996543 4789999864210 00 11122333 78888888
Q ss_pred CC--CCceeeEEeeeecCceeEEEEEeccCCCHHH-HhhhcCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEeccCC
Q 037111 744 VR--HRNIVKFYGFCSHARHSFLVYEYLERGSLAR-ILSSETATEMDWSKRVNVIKGVAHALSYM-HHECRPPIVHRDVS 819 (964)
Q Consensus 744 l~--h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~iiH~dlk 819 (964)
+. .-++.+.+++ ..-++||||+.++.+.. .++. ..++..+...+..+++.++..+ |.. ++||||++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 84 3556666664 45689999997654322 2221 1244456677889999999999 788 99999999
Q ss_pred CCCeEECCCCceEEeccCcccccC
Q 037111 820 SKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 820 p~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+.||+++ ++.+.++|||.+....
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeCC
Confidence 9999997 5789999999886554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.1e-11 Score=130.63 Aligned_cols=208 Identities=25% Similarity=0.306 Sum_probs=147.9
Q ss_pred ccCCCCcCeeecccCCccCcCC--cccCCCCcccEEEccccccCCccc--c-cCCCCCCCEEEcCCCCCCCCCCCC-CCC
Q 037111 104 IGNLTKLKFLNLSSNHFSGKIP--SEIGLLTNLEVLHMFVNHLNGSIP--E-IGHLSSLKNLALDGNHLDGPIPVS-IGN 177 (964)
Q Consensus 104 ~~~l~~L~~L~Ls~n~l~~~~p--~~~~~l~~L~~L~l~~n~l~~~~~--~-~~~l~~L~~L~L~~n~l~~~~p~~-~~~ 177 (964)
=.++.+|+...|.+..+. ..+ .....+++++.|||+.|-+..--+ . ...|++|+.|+|+.|.+....... -..
T Consensus 117 Qsn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 357889999999998886 333 356789999999999998875433 2 467899999999999997433222 235
Q ss_pred CCCCcEEEEecCCCCCC-CCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCCh--hhhhcccccc
Q 037111 178 LSSLVGLYLYNNSLPGS-IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP--QEIGNLKLLT 254 (964)
Q Consensus 178 l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~ 254 (964)
+++|+.|.|+.|.++-. +-.....+++|+.|+|..|..-.+-.....-+..|++|||++|++-. .+ ...+.++.|+
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~ 274 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLN 274 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchh
Confidence 78899999999988732 12234567899999999996444444556677889999999998863 33 4567788899
Q ss_pred eeeccccccccc-cCCc-----ccCccccceeeccccccccc-CCcccccCccccEEEeeCccCcc
Q 037111 255 DLSLSQNQLRGT-VPSS-----LSNLSSLEILHLYDNQLSGH-IPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 255 ~L~L~~N~l~~~-~p~~-----l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
.|+++.+.++.. .|+. ...+++|++|++..|+|..- .-..+..+.+|+.|.+..|.++.
T Consensus 275 ~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 275 QLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 999999888742 2333 34567888888888888521 11234455667777777777763
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.3e-12 Score=131.12 Aligned_cols=136 Identities=23% Similarity=0.292 Sum_probs=95.3
Q ss_pred ccCCcceeecccccccCC----CchhhhccCCCCceecccCcccccc----CCCcccccccceecCCccccCcc----ch
Q 037111 441 NLTSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRFSKSI----PGNMGYLLKLHYLNMSSNEFSQE----IP 508 (964)
Q Consensus 441 ~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~----~~ 508 (964)
.-+.|+++..+.|++... +...|...+.|+.+.++.|.|.... ...|..+++|+.|||..|-++.. +.
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~La 234 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALA 234 (382)
T ss_pred CCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHH
Confidence 346778888888877633 2245566678888888888775322 23456788888888888888643 34
Q ss_pred hhhhccccCCeecccCccccCCCChhcc-----cccccceeeccCCcCCC----cccccccccccceEEEecCCccc
Q 037111 509 IQLGKLVQLSELDLSHNLLRGEIPPEIC-----NLESLEKLNLSHNNLSG----SIPTNFENMHGLLSIDISYNELD 576 (964)
Q Consensus 509 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~l~ls~N~l~ 576 (964)
..++.+++|+.|++++|.+...-..+|. ..++|+.|.|.+|.|+- .+.......+.|..|+|++|++.
T Consensus 235 kaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 5667778888888888888755443332 36788999999998873 23444566888999999999884
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.4e-12 Score=130.28 Aligned_cols=89 Identities=27% Similarity=0.316 Sum_probs=43.4
Q ss_pred hhccCCCCceecccCccccc----cCCCcccccccceecCCccccCccchhhhh-----ccccCCeecccCccccC----
Q 037111 463 LGLLTDLGYLDLSANRFSKS----IPGNMGYLLKLHYLNMSSNEFSQEIPIQLG-----KLVQLSELDLSHNLLRG---- 529 (964)
Q Consensus 463 ~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~---- 529 (964)
+..+++|+.|||.+|-|+.. +...+..+++|+.|++++|.+......+|. ..++|+.|.|.+|.|+.
T Consensus 209 l~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~ 288 (382)
T KOG1909|consen 209 LEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAAL 288 (382)
T ss_pred HHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHH
Confidence 33444444444444444321 122334445555555555555443332222 23556666666666652
Q ss_pred CCChhcccccccceeeccCCcC
Q 037111 530 EIPPEICNLESLEKLNLSHNNL 551 (964)
Q Consensus 530 ~~~~~~~~l~~L~~L~Ls~N~l 551 (964)
.+...+...+.|+.|+|++|.+
T Consensus 289 ~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 289 ALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHhcchhhHHhcCCcccc
Confidence 1223344566677777777776
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.1e-11 Score=115.69 Aligned_cols=106 Identities=34% Similarity=0.375 Sum_probs=27.2
Q ss_pred CCcceeecccccccCCCchhhh-ccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeec
Q 037111 443 TSLNDLILNGNQLSGGIPPELG-LLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELD 521 (964)
Q Consensus 443 ~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 521 (964)
.++++|+|++|.|+. + +.++ .+.+|+.|+|++|.|+.. ..+..+++|++|++++|+|+...+.....+++|++|+
T Consensus 19 ~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 19 VKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 345555555555542 1 1233 344555555555555432 2345556666666666666543222223456666666
Q ss_pred ccCccccCCC-ChhcccccccceeeccCCcCC
Q 037111 522 LSHNLLRGEI-PPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 522 Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
|++|+|.... -..+..+++|+.|+|.+|+++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 6666665321 133445566666666666665
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.2e-11 Score=115.65 Aligned_cols=110 Identities=29% Similarity=0.326 Sum_probs=22.5
Q ss_pred cCCCCCCCEEEcCCCCCCCCCCCCCC-CCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCcccc
Q 037111 151 IGHLSSLKNLALDGNHLDGPIPVSIG-NLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKL 229 (964)
Q Consensus 151 ~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 229 (964)
+.+..++++|+|++|.|+. + +.++ .+.+|+.|+|++|.|+. ++ .+..+++|++|++++|+|+.+.+.....+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNL 90 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT-
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCccccchHHhCCcC
Confidence 3334445555555555552 2 2333 34555555555555552 22 24444445555555555543211111234444
Q ss_pred ceeeccccccCCCC-hhhhhcccccceeeccccccc
Q 037111 230 TKLELSNNQLSGSI-PQEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 230 ~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~ 264 (964)
++|+|++|+|.... -..+..+++|+.|+|.+|.++
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 55555555443211 123334444444444444444
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=3e-09 Score=100.32 Aligned_cols=146 Identities=16% Similarity=0.231 Sum_probs=108.7
Q ss_pred ccceeecCCceeEEEEEeCCCCeEEEEEecccc------CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 693 ESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFT------GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
....+-+|+-+.|+++.+. |+.++||.-.... ...-..+..++|+..+.++.--.|....-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4567899999999999985 8888888532211 12233456788999988876445544444555556667899
Q ss_pred EeccC-CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceEEeccCccccc
Q 037111 767 EYLER-GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAHVSDFGTAKLL 842 (964)
Q Consensus 767 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~a~~~ 842 (964)
||++| .++.+|+......+.........+..|-+.+.-||.. +|||||+..+||++..++ .+.+.|||++..-
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99987 4889998775544444444478899999999999999 999999999999997665 3589999998643
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.9e-09 Score=112.19 Aligned_cols=143 Identities=20% Similarity=0.250 Sum_probs=109.1
Q ss_pred ceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC--CceeeEEeeeecC---ceeEEEEEec
Q 037111 695 FCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH--RNIVKFYGFCSHA---RHSFLVYEYL 769 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~---~~~~lv~e~~ 769 (964)
+.++.|.++.||+++..+|+.|++|........ .....+..|+++++.+.+ ..+.+++.+.... +..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999998876789999987543221 134567889999998875 4467777777654 3678999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------------
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC---------------------------------------- 809 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------- 809 (964)
+|.++.+.+.. ..++..+...++.++++++.+||+..
T Consensus 83 ~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 83 DGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 99888776531 23666777788888888888888531
Q ss_pred -------------CCCeEeccCCCCCeEECC--CCceEEeccCcccc
Q 037111 810 -------------RPPIVHRDVSSKNVLLDF--EYEAHVSDFGTAKL 841 (964)
Q Consensus 810 -------------~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~ 841 (964)
...++|||++|.||+++. ++.+.++||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999998753
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.7e-09 Score=101.41 Aligned_cols=132 Identities=21% Similarity=0.317 Sum_probs=99.1
Q ss_pred eeecCCceeEEEEEeCCCCeEEEEEeccc-c-----CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSF-T-----GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 696 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~-----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
.+++|+-+.+|.+.+. |.++++|.-... . ...-....-..|+.++.++.--.|...+-+..+.....++|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999775 556777753221 1 11222345677888888876555555555566677788999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
+|-.|.+++... ...++..+-.-+.-||.. +|||||+.++||++..++ +.++|||++..
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999998654 134666677777889999 999999999999997665 99999999964
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.9e-08 Score=106.24 Aligned_cols=259 Identities=15% Similarity=0.181 Sum_probs=163.2
Q ss_pred cccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeee------ec-CceeE
Q 037111 692 DESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFC------SH-ARHSF 763 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~------~~-~~~~~ 763 (964)
...+.||+|+.+.+|-.-- -...+.|++..... ..+ .+.++.|... .||-+-.=+.|- -+ +....
T Consensus 14 ~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Ppp--a~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iG 86 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPP--AAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIG 86 (637)
T ss_pred CCCccccCCccceeeecch--hhchhheeecCCCc--hHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeE
Confidence 3466799999999997521 12245677764322 111 1233344433 566544322221 11 23378
Q ss_pred EEEEeccCC-CHHHHhh----hcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 764 LVYEYLERG-SLARILS----SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 764 lv~e~~~~g-sL~~~l~----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
++|+.+.|. -..++.. ++......|...++++..++.+.+.||.+ |.+-||+.++|+|+.+++.|.+.|-..
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccc
Confidence 899988875 3333332 23444578999999999999999999999 999999999999999999999998665
Q ss_pred ccccCCCCCCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhC-CCCCCccccccCCCCCCCChh--H
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKG-QHPKDLLSSLSDSSLPGANMN--E 910 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg-~~p~~~~~~~~~~~~~~~~~~--~ 910 (964)
-... ..+......+|.+.|.+||.-. +-+-+...|.|.+||++++++.| ++||.......+..-+....- .
T Consensus 164 fqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 164 FQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred eeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 4332 3444455678899999999754 44567789999999999999876 899865444333222221000 0
Q ss_pred HH--HhhhccCCCCCccccchHHHHHHHHHHHHHccCC--CCCCCCCHHHHHHHh
Q 037111 911 AI--DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDA--NPERRPNMQIVCKLL 961 (964)
Q Consensus 911 ~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~--dp~~RPs~~evl~~L 961 (964)
.. .........++.......-.+.++..+..+|+.. .+.-||+++-.+..|
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl 297 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAAL 297 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Confidence 00 0001111112222222334445566666688854 367899998877665
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=4e-10 Score=136.54 Aligned_cols=201 Identities=25% Similarity=0.331 Sum_probs=109.0
Q ss_pred CCcCeeecccCCccCcCCcccCCCCcccEEEccccc--cCCccc-ccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEE
Q 037111 108 TKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNH--LNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGL 184 (964)
Q Consensus 108 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~--l~~~~~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 184 (964)
...+...+-+|.+. .++....+ +.|++|-+..|. +..... .|..++.|++|||++|.=-+.+|..+++|-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 45555555555554 33433322 256666666664 222222 25666777777777666656677777777777777
Q ss_pred EEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecccccc--CCCChhhhhcccccceeeccccc
Q 037111 185 YLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQL--SGSIPQEIGNLKLLTDLSLSQNQ 262 (964)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l--~~~~p~~~~~l~~L~~L~L~~N~ 262 (964)
+|++..++ .+|..+++|..|.+|++..+.-...+|.....+.+|++|.+..-.. +...-..+..+.+|+.+......
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s 679 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISS 679 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecch
Confidence 77777777 6677777777777777776665555566666677777777655432 22222333444444444443222
Q ss_pred cccccCCcccCccccc----eeecccccccccCCcccccCccccEEEeeCccCccc
Q 037111 263 LRGTVPSSLSNLSSLE----ILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314 (964)
Q Consensus 263 l~~~~p~~l~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 314 (964)
. .+-..+..+..|. .+.+..+... ..+..+..+.+|+.|.+.++.+...
T Consensus 680 ~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~ 732 (889)
T KOG4658|consen 680 V--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEI 732 (889)
T ss_pred h--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchh
Confidence 2 0111122222222 2222222222 3344556666777777777666543
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.7e-10 Score=80.33 Aligned_cols=42 Identities=33% Similarity=0.842 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeceEeC
Q 037111 10 IEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCN 56 (964)
Q Consensus 10 ~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~w~gv~C~ 56 (964)
.+|++|||+||+++.++|.+.+++|+... .++||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~-----~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSS-----DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT-------S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcC-----CCCCeeeccEEeC
Confidence 36899999999999988888999998642 2689999999996
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.6e-10 Score=131.68 Aligned_cols=250 Identities=21% Similarity=0.256 Sum_probs=169.9
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
..+.+.+.+-+..|.++.++-+.-. .|...++|....... ...+.+....+-.+.-..+||-+++..-.+.-....++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4566777778889999999887432 343344443321110 01111122222233333345777766655556678899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|++|..+++|...++..+. .+....+.....+.++.+|||+. .+.|+|++|.|.+...+++.+++|||.......
T Consensus 882 ~~~~~~~~~~~Skl~~~~~--~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGC--LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhHHhccCCchhhhhcCCC--cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccc
Confidence 9999999999999976553 34444555677788999999998 799999999999999999999999983321110
Q ss_pred C---------------------C----------CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 037111 845 D---------------------S----------SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKD 893 (964)
Q Consensus 845 ~---------------------~----------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~ 893 (964)
. . .......+|+.|.+||...+......+|+|+.|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 0 00123468999999999999999999999999999999999999975
Q ss_pred ccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHH
Q 037111 894 LLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955 (964)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ 955 (964)
... .++..+.+....++.+. ..........+++...+..+|.+|-.+.
T Consensus 1037 a~t-----------pq~~f~ni~~~~~~~p~---g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AET-----------PQQIFENILNRDIPWPE---GPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccc-----------hhhhhhccccCCCCCCC---CccccChhhhhhhhhhhccCchhccCcc
Confidence 332 23445555555555432 2333444456667788888999888765
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-09 Score=132.76 Aligned_cols=295 Identities=25% Similarity=0.243 Sum_probs=154.3
Q ss_pred CCCcEEEEecCCCCCCCCccccCCCCcchhhccccc--ccCCccccccCccccceeeccccccCCCChhhhhccccccee
Q 037111 179 SSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNH--LRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDL 256 (964)
Q Consensus 179 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~--l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 256 (964)
...+...+-+|.+. .++....+ ++|++|-+..|. +.....+.|..++.|+.|||++|.=-+.+|..++++-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 56677777777776 34443332 367777777775 554555557777777777777776556777777777777777
Q ss_pred eccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCc--ccCCcccccCCcceEEEeeccc
Q 037111 257 SLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT--GFLPQNICQSGSLQYFSVHDNY 334 (964)
Q Consensus 257 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~~~~L~~L~l~~n~ 334 (964)
+|++..++ .+|..+.+++.|.+|++..+.-...+|.....+++|++|.+..-... ...-..+..+.+|+.+......
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s 679 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISS 679 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecch
Confidence 77777777 67777777777777777776655455666666777777777654311 1111122222333333322211
Q ss_pred ccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCC
Q 037111 335 FIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPE 414 (964)
Q Consensus 335 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~ 414 (964)
. .+-..+..++.|..+ .+.+.+.++. .......+..+.+|+.|.+.++.+.......
T Consensus 680 ~--~~~e~l~~~~~L~~~--------------------~~~l~~~~~~-~~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~ 736 (889)
T KOG4658|consen 680 V--LLLEDLLGMTRLRSL--------------------LQSLSIEGCS-KRTLISSLGSLGNLEELSILDCGISEIVIEW 736 (889)
T ss_pred h--HhHhhhhhhHHHHHH--------------------hHhhhhcccc-cceeecccccccCcceEEEEcCCCchhhccc
Confidence 1 000111111111100 0111111111 1122334455666666666666665332222
Q ss_pred Ccc------cccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccc-cCCCc
Q 037111 415 IGN------ATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKS-IPGNM 487 (964)
Q Consensus 415 ~~~------l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~ 487 (964)
... ++++..+...++..- ..+.+....++|+.|.+..+.....+.+....+..++.+-+..+.+.+. .-...
T Consensus 737 ~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l 815 (889)
T KOG4658|consen 737 EESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSL 815 (889)
T ss_pred ccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecC
Confidence 111 112222222222111 2233333457788888887776666666666666666655666665544 23344
Q ss_pred ccccccceecCCc
Q 037111 488 GYLLKLHYLNMSS 500 (964)
Q Consensus 488 ~~l~~L~~L~Ls~ 500 (964)
++++++..+.++.
T Consensus 816 ~~l~~i~~~~l~~ 828 (889)
T KOG4658|consen 816 GGLPQLYWLPLSF 828 (889)
T ss_pred CCCceeEecccCc
Confidence 4555555444443
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.1e-09 Score=84.81 Aligned_cols=60 Identities=43% Similarity=0.598 Sum_probs=37.5
Q ss_pred cCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcc
Q 037111 516 QLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575 (964)
Q Consensus 516 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l 575 (964)
+|+.|++++|+|+...+..|.++++|++|++++|+|+...|..|.++++|+.|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456666666666654445566666666666666666655566666666666666666654
|
... |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=6.1e-08 Score=102.11 Aligned_cols=143 Identities=21% Similarity=0.154 Sum_probs=100.5
Q ss_pred ceeecCCceeEEEEEeCCCCeEEEEEeccccCch---------hhHHHHHHHHHHHhCCCCCc--eeeEEeeeec-----
Q 037111 695 FCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGET---------THQKEFLSEIKALTGVRHRN--IVKFYGFCSH----- 758 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~----- 758 (964)
+.+-......|+++.+ +|+.|.||+........ .....+.+|...+.++...+ +++.+++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444444555777766 47889999764322110 11124678888877774322 3344455433
Q ss_pred CceeEEEEEeccCC-CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-------CCc
Q 037111 759 ARHSFLVYEYLERG-SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-------EYE 830 (964)
Q Consensus 759 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-------~~~ 830 (964)
....++|||++++. +|.+++......+.+......++.+++..+.-||.. ||+|||+++.|||++. ++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 23578999999886 899998543233455667778999999999999999 9999999999999975 468
Q ss_pred eEEeccCcccc
Q 037111 831 AHVSDFGTAKL 841 (964)
Q Consensus 831 ~kl~Dfg~a~~ 841 (964)
+.++||+-++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998854
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.1e-09 Score=84.85 Aligned_cols=60 Identities=38% Similarity=0.523 Sum_probs=30.8
Q ss_pred ccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcC
Q 037111 492 KLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNL 551 (964)
Q Consensus 492 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 551 (964)
+|++|++++|+|+...+..|..+++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 344555555555444444555555555555555555544444555555555555555543
|
... |
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.72 E-value=8.4e-08 Score=95.03 Aligned_cols=128 Identities=24% Similarity=0.332 Sum_probs=82.5
Q ss_pred eEEEEEeCCCCeEEEEEeccccC------------------------chhhHHHHHHHHHHHhCCCCC--ceeeEEeeee
Q 037111 704 SVYKAELPSGDTVAVKKLHSFTG------------------------ETTHQKEFLSEIKALTGVRHR--NIVKFYGFCS 757 (964)
Q Consensus 704 ~Vy~~~~~~~~~vavK~~~~~~~------------------------~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 757 (964)
.||.|...+|..+|||..+.... .........+|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999988899999998642100 011123577899999998754 566666553
Q ss_pred cCceeEEEEEecc--CCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH-HhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 758 HARHSFLVYEYLE--RGSLARILSSETATEMDWSKRVNVIKGVAHALSY-MHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 758 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
.-++||||++ |..+....... ++......++.+++..+.. +|.. |++|||+.+.||+++++ .+.++
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEE
Confidence 3479999998 54554433222 1123445677778885555 5677 99999999999999887 99999
Q ss_pred ccCcccccC
Q 037111 835 DFGTAKLLK 843 (964)
Q Consensus 835 Dfg~a~~~~ 843 (964)
|||.+....
T Consensus 149 Df~qav~~~ 157 (188)
T PF01163_consen 149 DFGQAVDSS 157 (188)
T ss_dssp -GTTEEETT
T ss_pred ecCcceecC
Confidence 999886543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.8e-07 Score=98.54 Aligned_cols=167 Identities=20% Similarity=0.281 Sum_probs=125.7
Q ss_pred ceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec----CceeEEEEEeccCC-CHH
Q 037111 702 YGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH----ARHSFLVYEYLERG-SLA 775 (964)
Q Consensus 702 ~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~g-sL~ 775 (964)
..+.|++.. .||..|+.|+++...... .-....-+++++++.|+|+|++.++|.. +..+++||+|.++. +|.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccC--cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 457799844 489999999994322111 1123356788999999999999999873 34689999999874 888
Q ss_pred HHhhhc-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 776 RILSSE-------------TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 776 ~~l~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++-... .....++..++.++.|++.||.++|+. |...+-+.|++|+++.+.+++|+..|.....
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 765321 122467889999999999999999999 9999999999999999999999988877655
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQH 890 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~ 890 (964)
..+.. |-+. --.+-|.=.||.++..+.||..
T Consensus 444 ~~d~~--------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 444 QEDPT--------------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred cCCCC--------------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 43321 1111 1235788899999999999864
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.7e-10 Score=123.28 Aligned_cols=180 Identities=30% Similarity=0.385 Sum_probs=107.0
Q ss_pred CCCCcccccCcEEeccCCcccccCCcccccc-CCcceeeccccccc---CCCchhhhc------cCCCCceecccCcccc
Q 037111 412 PPEIGNATQLHELDFSSNHLVGKVPLELANL-TSLNDLILNGNQLS---GGIPPELGL------LTDLGYLDLSANRFSK 481 (964)
Q Consensus 412 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~L~~N~l~---~~~~~~~~~------l~~L~~L~Ls~N~l~~ 481 (964)
|-.+.....|+.|.|.++.|.. ...+..+ ..|++|.-. |.+. ..+....+. ...|..-+.++|++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 4455667788888888887752 1112222 234444322 2221 111111111 124566677778775
Q ss_pred ccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCCh-hcccccccceeeccCCcCCCccccccc
Q 037111 482 SIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPP-EICNLESLEKLNLSHNNLSGSIPTNFE 560 (964)
Q Consensus 482 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 560 (964)
..-.++.-++.|+.||||+|+++... .+..++.|++|||++|+++ .+|. ...++. |+.|+|++|.++.. ..++
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hhHH
Confidence 45556777778888888888886543 6777788888888888887 3443 233333 88888888877632 3466
Q ss_pred ccccceEEEecCCccccc--CCCCccCCCCCcccccCCCCccC
Q 037111 561 NMHGLLSIDISYNELDGP--IPSIEAFRHAPVEALQGNKGLCG 601 (964)
Q Consensus 561 ~l~~L~~l~ls~N~l~~~--~~~~~~~~~~~~~~~~~n~~~c~ 601 (964)
++.+|+.||||+|-|.+- ....-.+..+...+++|||.-|.
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 777888888888877762 11112334455566788887775
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.5e-07 Score=95.16 Aligned_cols=137 Identities=25% Similarity=0.249 Sum_probs=95.7
Q ss_pred ccccceeecCCceeEEEEEeCCCCeEEEEEec----------ccc--------Cc--hhhHHHHHHHHHHHhCCCCC--c
Q 037111 691 FDESFCIGRGGYGSVYKAELPSGDTVAVKKLH----------SFT--------GE--TTHQKEFLSEIKALTGVRHR--N 748 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~----------~~~--------~~--~~~~~~~~~E~~~l~~l~h~--n 748 (964)
..++..||-|--+.||.|..++|.++|||.=+ ... .+ ........+|.+.|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34567899999999999999999999999421 000 00 12234567889999888644 6
Q ss_pred eeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC
Q 037111 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE 828 (964)
Q Consensus 749 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~ 828 (964)
|.+.+++ +.-.+||||++|-.|...- ++......++..|++-+.-.-.. ||||||+.+-||++++|
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTED 238 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecC
Confidence 7766665 3457999999996665432 11222333444455544444455 99999999999999999
Q ss_pred CceEEeccCcccc
Q 037111 829 YEAHVSDFGTAKL 841 (964)
Q Consensus 829 ~~~kl~Dfg~a~~ 841 (964)
|.+.++||--+..
T Consensus 239 g~~~vIDwPQ~v~ 251 (304)
T COG0478 239 GDIVVIDWPQAVP 251 (304)
T ss_pred CCEEEEeCccccc
Confidence 9999999976543
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.6e-10 Score=123.35 Aligned_cols=127 Identities=33% Similarity=0.302 Sum_probs=90.9
Q ss_pred cCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCC
Q 037111 420 QLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMS 499 (964)
Q Consensus 420 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 499 (964)
.|...+++.|.++ ....++.-++.|+.|+|++|+++... .+..++.|+.|||++|.+....--...++ +|..|.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhh-hheeeeec
Confidence 5777788888886 56667777788888888888887443 67788888888888888864322222333 38888888
Q ss_pred ccccCccchhhhhccccCCeecccCccccCCCC-hhcccccccceeeccCCcCC
Q 037111 500 SNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIP-PEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 500 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~ 552 (964)
+|.++.. ..+.+|++|+.||+++|-|.+.-. ..+..|..|..|+|.||+|-
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 8888632 346778888888888888775322 22456778888888888875
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.61 E-value=7.5e-09 Score=104.07 Aligned_cols=208 Identities=25% Similarity=0.296 Sum_probs=109.4
Q ss_pred CcchhhcccccccCCcc-ccc-cCccccceeeccccccCC--CChhhhhcccccceeeccccccccccCCcccCccccce
Q 037111 204 NLVYLFLKKNHLRGPIP-SSF-GYLRKLTKLELSNNQLSG--SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEI 279 (964)
Q Consensus 204 ~L~~L~L~~N~l~~~~~-~~~-~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 279 (964)
.++.|.+.++.|...-. ..| ...+.+++|||.+|+|+. .+...+.+++.|++|+|+.|.+...|...-..+.+|++
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 34445555555442211 112 234667777888877763 23344567788888888888887433221135677888
Q ss_pred eecccccccc-cCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeeccccccccc--ccccCCCcCCeeecCC
Q 037111 280 LHLYDNQLSG-HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLP--KTLRNCTSLERVRLEK 356 (964)
Q Consensus 280 L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p--~~l~~l~~L~~L~L~~ 356 (964)
|-|.+..+.- .....+..+++++.|.++.|.+. .+++.+|......| .++...+.+..+.++-
T Consensus 126 lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~r--------------q~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~ 191 (418)
T KOG2982|consen 126 LVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLR--------------QLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNK 191 (418)
T ss_pred EEEcCCCCChhhhhhhhhcchhhhhhhhccchhh--------------hhccccccccccchhhhhhhcCCcHHHHHHHH
Confidence 8887777653 22344566777777877777433 22333333332211 1122223333344444
Q ss_pred CccccccCcccCCCCCCcEEEccCCeeccccC-ccccCCCccceEeecccccCCCC-CCCCcccccCcEEeccCCccc
Q 037111 357 NQLIGNISDDFGIYPNLKLFDLSYNKFYGELS-SNWWNCPQLGILKIAGNNITGGI-PPEIGNATQLHELDFSSNHLV 432 (964)
Q Consensus 357 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~-~~~~~~~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~Ls~N~l~ 432 (964)
|++.. .+|++..+-+..|.+.+... ..+..+|.+..|+|+.|+|...- -+++..+++|..|.+++|.+.
T Consensus 192 ~~l~r-------~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 192 NKLSR-------IFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred HhHHh-------hcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 44432 35666666677776654432 23334455555666665554211 123445555555556655554
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.6e-07 Score=88.07 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=104.8
Q ss_pred eecCCceeEEEEEeCCCCeEEEEEeccc-cCc---hhhHHHHHHHHHHHhCCCC--CceeeEEeeeec-----CceeEEE
Q 037111 697 IGRGGYGSVYKAELPSGDTVAVKKLHSF-TGE---TTHQKEFLSEIKALTGVRH--RNIVKFYGFCSH-----ARHSFLV 765 (964)
Q Consensus 697 lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~---~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~-----~~~~~lv 765 (964)
-|+||.+-|++.... |..|-+|+-... ... +-....|.+|...+.++.. -.+.+.+ ++.. ....++|
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 367899999998875 557889975411 111 3345789999999888742 2244444 3321 1246899
Q ss_pred EEeccC-CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc--eEEeccCcccc
Q 037111 766 YEYLER-GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE--AHVSDFGTAKL 841 (964)
Q Consensus 766 ~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~a~~ 841 (964)
+|-++| -||.+++......+.+......++.++++++.-||.. |+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998865 3999998665555567788889999999999999999 9999999999999987776 99999986653
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.1e-08 Score=113.14 Aligned_cols=150 Identities=17% Similarity=0.272 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC-Cc---cc-----cccccccccccccc
Q 037111 795 IKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS-NW---SE-----LAGTYGYVAPELAY 865 (964)
Q Consensus 795 ~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~---~~-----~~g~~~y~aPE~~~ 865 (964)
+.+++.|+.|+|... ++||++|.|++|.++..+.+|+++|+++....+... .. .. ......|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 345569999999875 899999999999999999999999998865544211 11 11 12345799999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHhCCCC-CCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHcc
Q 037111 866 TMKVTEKCDVYSFGVLALEVIKGQHP-KDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCV 944 (964)
Q Consensus 866 ~~~~~~~sDvwSlGvll~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 944 (964)
+...+.++|+||+||++|.+..|+.+ +..........+..... +.-. .......+.++.+=+.+++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~-~~~~------------~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLL-NAGA------------FGYSNNLPSELRESLKKLL 249 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccc-cccc------------ccccccCcHHHHHHHHHHh
Confidence 98889999999999999999955444 33222111111100000 0000 0111234455777777899
Q ss_pred CCCCCCCCCHHHHHH
Q 037111 945 DANPERRPNMQIVCK 959 (964)
Q Consensus 945 ~~dp~~RPs~~evl~ 959 (964)
..++..||++.++..
T Consensus 250 ~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLS 264 (700)
T ss_pred cCCcccCcchhhhhc
Confidence 999999998877654
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.48 E-value=1e-08 Score=91.36 Aligned_cols=105 Identities=25% Similarity=0.349 Sum_probs=52.0
Q ss_pred cCcEEeccCCcccccCCcccc---ccCCcceeecccccccCCCchhhh-ccCCCCceecccCccccccCCCcccccccce
Q 037111 420 QLHELDFSSNHLVGKVPLELA---NLTSLNDLILNGNQLSGGIPPELG-LLTDLGYLDLSANRFSKSIPGNMGYLLKLHY 495 (964)
Q Consensus 420 ~L~~L~Ls~N~l~~~~~~~l~---~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 495 (964)
.+..+||+++++. .+++... ....|+..+|++|.+. ..|+.|. ..+.++.|+|++|.|+ .+|..+..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 4566677777664 3333332 2344555566666665 3333332 2335555555555554 23444555555555
Q ss_pred ecCCccccCccchhhhhccccCCeecccCcccc
Q 037111 496 LNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLR 528 (964)
Q Consensus 496 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 528 (964)
|+++.|.+. ..|..+..|.+|..||..+|.+.
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 555555553 34444444555555555555544
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.4e-08 Score=97.52 Aligned_cols=87 Identities=21% Similarity=0.308 Sum_probs=52.2
Q ss_pred CCCcCCeeecCCCcccc--ccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCC-CCCCCCcccccC
Q 037111 345 NCTSLERVRLEKNQLIG--NISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITG-GIPPEIGNATQL 421 (964)
Q Consensus 345 ~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~-~~~~~~~~l~~L 421 (964)
.++.++.++|.+|.|+. .+...+..+|.|++|+|+.|.+...+...-....+|+.|-|.+..+.= .....+..++.+
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 45667777777777764 333445667777777777777765444333455566666666655431 222334566667
Q ss_pred cEEeccCCcc
Q 037111 422 HELDFSSNHL 431 (964)
Q Consensus 422 ~~L~Ls~N~l 431 (964)
++|++|.|.+
T Consensus 149 telHmS~N~~ 158 (418)
T KOG2982|consen 149 TELHMSDNSL 158 (418)
T ss_pred hhhhhccchh
Confidence 7777776643
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 964 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-43 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-43 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 5e-43 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 2e-42 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-29 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-29 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 7e-29 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-28 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-28 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-28 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 5e-28 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-27 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 2e-23 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-20 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 5e-20 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 6e-20 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 9e-20 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 9e-20 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 9e-20 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 1e-19 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 2e-19 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 1e-18 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-19 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 4e-19 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 4e-19 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 5e-19 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 6e-19 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 1e-18 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 1e-18 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-18 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 2e-18 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-18 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-18 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-18 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 2e-18 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-18 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-18 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 2e-18 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-18 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-18 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 2e-18 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 2e-18 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 3e-18 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-18 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-18 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 3e-18 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 3e-18 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-18 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-18 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 3e-18 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 3e-18 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 3e-18 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 4e-18 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 4e-18 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 4e-18 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 4e-18 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 4e-18 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 4e-18 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 4e-18 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 5e-18 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-18 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 5e-18 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 5e-18 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 5e-18 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 5e-18 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 5e-18 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 6e-18 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 6e-18 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 6e-18 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 6e-18 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 6e-18 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 6e-18 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 6e-18 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 6e-18 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 6e-18 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 6e-18 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 7e-18 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 7e-18 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 8e-18 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 8e-18 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 9e-18 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 1e-17 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 1e-17 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 1e-17 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-17 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 2e-17 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 2e-17 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-17 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 2e-17 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-17 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-17 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 4e-17 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 4e-17 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 4e-17 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 4e-17 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 6e-17 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 6e-17 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-17 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 7e-17 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 7e-17 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 9e-17 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 9e-17 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 1e-16 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 1e-16 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 1e-16 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 1e-16 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 1e-16 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-16 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 1e-16 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 1e-16 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-16 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-16 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-16 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 1e-16 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-16 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 1e-16 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-16 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-16 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-16 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 2e-16 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 2e-16 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 2e-16 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-16 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 2e-16 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 2e-16 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-16 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-16 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-16 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 2e-16 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 2e-16 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-16 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 3e-16 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 3e-16 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 3e-16 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 3e-16 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 3e-16 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 3e-16 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 3e-16 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 4e-16 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 5e-16 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 5e-16 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 5e-16 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 5e-16 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 6e-16 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 6e-16 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 6e-16 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 6e-16 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 6e-16 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 6e-16 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 6e-16 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 6e-16 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 6e-16 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 7e-16 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 7e-16 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 7e-16 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 8e-16 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 1e-15 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-15 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 1e-15 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-15 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-15 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 1e-15 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-15 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 2e-15 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-15 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-15 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-15 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 2e-15 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-15 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-15 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 3e-15 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 3e-15 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-15 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 4e-15 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 4e-15 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 5e-15 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 5e-15 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 6e-15 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 9e-15 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 9e-15 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 9e-15 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 9e-15 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 9e-15 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 9e-15 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 9e-15 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 9e-15 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-14 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-14 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-14 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 1e-14 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 1e-14 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 1e-14 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 1e-14 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 1e-14 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 1e-14 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 1e-14 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 2e-14 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-14 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-14 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-14 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 2e-14 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-14 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-14 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 3e-14 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-14 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 3e-14 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 3e-14 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 3e-14 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-14 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 3e-14 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 3e-14 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 4e-14 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 4e-14 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 4e-14 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 4e-14 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 4e-14 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 4e-14 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 4e-14 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 4e-14 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 5e-14 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 5e-14 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 5e-14 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 5e-14 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 6e-14 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 7e-14 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 7e-14 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 7e-14 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 7e-14 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 7e-14 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 7e-14 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 7e-14 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 9e-14 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 9e-14 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 9e-14 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 9e-14 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 9e-14 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 1e-13 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 1e-13 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-13 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 1e-13 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-13 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 1e-13 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-13 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 2e-13 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 2e-13 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 2e-13 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-13 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-13 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 2e-13 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-13 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-13 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-13 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-13 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 2e-13 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-13 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 3e-13 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 3e-13 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 3e-13 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 3e-13 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 3e-13 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-13 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 3e-13 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 3e-13 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 3e-13 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 4e-13 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 4e-13 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 5e-13 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 5e-13 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 5e-13 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 5e-13 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 6e-13 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 6e-13 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 6e-13 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 7e-13 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 7e-13 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 7e-13 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 8e-13 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 9e-13 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 9e-13 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 1e-12 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 1e-12 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 1e-12 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 1e-12 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 1e-12 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 1e-12 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 1e-12 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-12 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 1e-12 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-12 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-12 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 1e-12 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 2e-12 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 2e-12 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 2e-12 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 2e-12 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-12 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 2e-12 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 2e-12 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 2e-12 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 2e-12 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 2e-12 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 2e-12 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 2e-12 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 2e-12 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 3e-12 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 3e-12 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 3e-12 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 3e-12 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 3e-12 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 3e-12 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 3e-12 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 3e-12 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 3e-12 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-12 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 4e-12 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 4e-12 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 4e-12 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 4e-12 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 4e-12 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 4e-12 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 4e-12 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 4e-12 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 5e-12 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 5e-12 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-12 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 5e-12 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 5e-12 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 5e-12 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-12 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 5e-12 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 6e-12 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 6e-12 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 6e-12 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 6e-12 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 7e-12 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-12 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-12 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 7e-12 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 7e-12 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 7e-12 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 7e-12 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 8e-12 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 8e-12 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 8e-12 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 9e-12 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 9e-12 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 9e-12 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-12 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 9e-12 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 9e-12 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 9e-12 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 1e-11 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 1e-11 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-11 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 1e-11 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-11 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 1e-11 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 1e-11 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 1e-11 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 1e-11 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 1e-11 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 1e-11 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 1e-11 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 1e-11 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 1e-11 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 1e-11 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-11 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-11 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-11 | ||
| 2omx_A | 462 | Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX | 1e-11 | ||
| 2omx_A | 462 | Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX | 1e-09 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-11 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 2e-11 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-11 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-11 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 2e-11 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 2e-11 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 2e-11 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 2e-11 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-11 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 2e-11 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 2e-11 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 2e-11 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 2e-11 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 2e-11 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 2e-11 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 2e-11 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 2e-11 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 2e-11 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 2e-11 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-11 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 2e-11 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 2e-11 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 2e-11 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 2e-11 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 2e-11 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 2e-11 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 3e-11 | ||
| 2omt_A | 462 | Crystal Structure Of Inla G194s+sHEC1 COMPLEX Lengt | 3e-11 | ||
| 2omt_A | 462 | Crystal Structure Of Inla G194s+sHEC1 COMPLEX Lengt | 6e-10 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 3e-11 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 3e-11 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-11 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 3e-11 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 3e-11 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 3e-11 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-11 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 3e-11 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-11 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 3e-11 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 3e-11 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 3e-11 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 3e-11 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 3e-11 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 4e-11 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 4e-11 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 4e-11 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 4e-11 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 4e-11 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 4e-11 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 3e-08 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 4e-11 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 4e-11 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 1e-08 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 4e-11 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-11 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 5e-11 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 5e-11 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 5e-11 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 5e-11 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 6e-11 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 6e-11 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 7e-11 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 7e-11 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 7e-11 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 8e-11 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 8e-11 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 8e-11 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 8e-11 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 9e-11 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 9e-11 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 9e-11 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 1e-10 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 1e-10 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 1e-10 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 1e-10 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-10 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 1e-10 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 1e-10 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 1e-10 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 1e-10 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 1e-10 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-10 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 1e-10 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-10 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 1e-10 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 1e-10 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 1e-10 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 1e-10 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 1e-10 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 1e-10 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 1e-10 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 1e-10 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-10 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 1e-10 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 1e-10 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 1e-10 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-10 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 2e-10 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-10 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 2e-10 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 2e-10 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 2e-10 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 2e-10 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 2e-10 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 2e-10 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 2e-10 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 2e-10 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-10 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 2e-10 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 2e-10 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 2e-10 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-10 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-10 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 2e-10 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-10 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 2e-10 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-10 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 2e-10 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 2e-10 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-10 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-10 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 2e-10 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-10 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 2e-10 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-10 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 2e-10 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 2e-10 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-10 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 2e-10 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 2e-10 | ||
| 2omu_A | 462 | Crystal Structure Of Inla G194s+s Y369s/hec1 Comple | 2e-10 | ||
| 2omu_A | 462 | Crystal Structure Of Inla G194s+s Y369s/hec1 Comple | 5e-10 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 2e-10 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-10 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 2e-10 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 2e-10 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 2e-10 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-10 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-10 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-10 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-10 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 2e-10 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 2e-10 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 2e-10 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-10 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 2e-10 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 3e-10 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 3e-10 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 3e-10 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 3e-10 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 3e-10 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 3e-10 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 3e-10 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-10 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 3e-10 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 3e-10 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 3e-10 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 3e-10 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 3e-10 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 3e-10 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 3e-10 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-10 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 3e-10 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 3e-10 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 3e-10 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 3e-10 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 3e-10 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 3e-10 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-10 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 3e-10 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-10 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-10 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-10 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 3e-10 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 3e-10 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 3e-10 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 3e-10 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 3e-10 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 3e-10 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 4e-10 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 4e-10 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 4e-10 | ||
| 2omv_A | 461 | Crystal Structure Of Inla S192n Y369s/hec1 Complex | 4e-10 | ||
| 2omv_A | 461 | Crystal Structure Of Inla S192n Y369s/hec1 Complex | 3e-08 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 4e-10 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 4e-10 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-10 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 4e-10 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 4e-10 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 4e-10 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 4e-10 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 4e-10 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 4e-10 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 4e-10 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 1e-08 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 4e-10 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 4e-10 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 4e-10 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 4e-10 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 4e-10 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 4e-10 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 4e-10 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-10 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 5e-10 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 5e-10 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 5e-10 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 5e-10 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 5e-10 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 6e-10 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 7e-10 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 7e-10 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-10 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 7e-10 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 7e-10 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 7e-10 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 7e-10 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 7e-10 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 7e-10 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 7e-10 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 8e-10 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 8e-10 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 8e-10 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 8e-10 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 8e-10 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 8e-10 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 8e-10 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 8e-10 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 9e-10 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 9e-10 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 9e-10 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 9e-10 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 9e-10 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 9e-10 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 9e-10 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-09 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 1e-09 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 1e-09 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 1e-09 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-09 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 1e-09 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 1e-09 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 1e-09 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 1e-09 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 1e-09 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 1e-09 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 1e-09 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-09 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 1e-09 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 1e-09 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 1e-09 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 1e-09 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 1e-09 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 1e-09 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 1e-09 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 1e-09 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 1e-09 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 1e-09 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 1e-09 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 1e-09 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 1e-09 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 1e-09 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 1e-09 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 1e-09 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 1e-09 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 1e-09 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 1e-09 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 1e-09 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 1e-09 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 1e-09 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 1e-09 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 1e-09 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 1e-09 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 1e-09 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 1e-09 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 1e-09 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 1e-09 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 1e-09 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 1e-09 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 1e-09 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 1e-09 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 1e-09 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 1e-09 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 1e-09 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 1e-09 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 1e-09 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 1e-09 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 1e-09 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-09 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 2e-09 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 2e-09 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 2e-09 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 2e-09 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 2e-09 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 2e-09 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 2e-09 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 2e-09 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 2e-09 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 2e-09 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-09 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 2e-09 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 2e-09 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 2e-09 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-09 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 2e-09 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-09 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 2e-09 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 2e-09 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 2e-09 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-09 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 2e-09 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 2e-09 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 2e-09 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 2e-09 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 2e-09 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 2e-09 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 2e-09 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 2e-09 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-09 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 2e-09 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 2e-09 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 2e-09 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 2e-09 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 2e-09 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 2e-09 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-09 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 3e-09 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 3e-09 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 3e-09 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 3e-09 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 3e-09 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 3e-09 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 3e-09 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 3e-09 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 3e-09 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 3e-09 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 3e-09 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 3e-09 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 3e-09 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 3e-09 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 3e-09 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 3e-09 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 3e-09 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 3e-09 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 3e-09 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 3e-09 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 3e-09 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 4e-09 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 4e-09 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 4e-09 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 4e-09 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 4e-09 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 4e-09 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 4e-09 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 4e-09 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 4e-09 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 5e-09 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 5e-09 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 5e-09 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 5e-09 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 5e-09 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 5e-09 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 5e-09 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 5e-09 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 5e-09 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 6e-09 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 6e-09 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 6e-09 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 7e-09 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 7e-09 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 8e-09 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 9e-09 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 9e-09 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 1e-08 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 1e-08 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 1e-08 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 1e-08 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 1e-08 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 1e-08 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 1e-08 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 1e-08 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 1e-08 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 1e-08 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 1e-08 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 1e-08 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-08 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 2e-08 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 2e-08 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 2e-08 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 2e-08 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 2e-08 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-08 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 2e-08 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-08 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 2e-08 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 2e-08 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 2e-08 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 3e-08 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 3e-08 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-08 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-08 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 3e-08 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 3e-08 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 3e-08 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 3e-08 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 3e-08 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 4e-08 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 4e-08 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 4e-08 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 5e-08 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 6e-08 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 7e-08 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 7e-08 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 8e-08 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 9e-08 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 9e-08 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 9e-08 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 1e-07 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 1e-07 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 1e-07 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-07 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 2e-07 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 2e-07 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 2e-07 | ||
| 2o6q_A | 270 | Structural Diversity Of The Hagfish Variable Lympho | 4e-04 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 2e-07 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 2e-07 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-07 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 2e-07 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 2e-07 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 2e-07 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 2e-07 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 2e-07 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-07 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 3e-07 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 3e-07 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 3e-07 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 3e-07 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 3e-07 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 3e-07 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 4e-07 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 4e-07 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 4e-07 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 4e-07 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 4e-07 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 4e-07 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 4e-07 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 5e-07 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 5e-07 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 5e-07 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 5e-07 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 5e-07 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 5e-07 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-07 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 5e-07 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-07 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 5e-07 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 5e-07 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 6e-07 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 6e-07 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 6e-07 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 7e-07 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 7e-07 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 7e-07 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 7e-07 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 7e-07 | ||
| 3m18_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 8e-07 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 8e-07 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 8e-07 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 8e-07 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 8e-07 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 8e-07 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 8e-07 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 8e-07 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 9e-07 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 9e-07 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 9e-07 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 1e-06 | ||
| 3m19_A | 251 | Crystal Structure Of Variable Lymphocyte Receptor V | 1e-06 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 1e-06 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 1e-06 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 1e-06 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 1e-06 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 1e-06 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 1e-06 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 1e-06 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 1e-06 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 1e-06 | ||
| 3rfj_A | 279 | Design Of A Binding Scaffold Based On Variable Lymp | 1e-06 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 2e-06 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 2e-06 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 2e-06 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 2e-06 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 2e-06 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 2e-06 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 2e-06 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 2e-06 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 3e-06 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 3e-06 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 3e-06 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 3e-06 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 3e-06 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 3e-06 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 3e-06 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 3e-06 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 3e-06 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 3e-06 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 3e-06 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 3e-06 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 3e-06 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 3e-06 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 3e-06 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 3e-06 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 3e-06 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 3e-06 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 3e-06 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 3e-06 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 3e-06 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 3e-06 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 4e-06 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 4e-06 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 4e-06 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 4e-06 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 4e-06 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 4e-06 | ||
| 3rfs_A | 272 | Design Of A Binding Scaffold Based On Variable Lymp | 4e-06 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 4e-06 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 4e-06 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 5e-06 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 5e-06 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 5e-06 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 6e-06 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 6e-06 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 6e-06 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 6e-06 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 6e-06 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 6e-06 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 6e-06 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 6e-06 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 7e-06 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 7e-06 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 7e-06 | ||
| 4fmz_A | 347 | Crystal Structure Of An Internalin (Inlf) From List | 7e-06 | ||
| 4fmz_A | 347 | Crystal Structure Of An Internalin (Inlf) From List | 8e-06 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 8e-06 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 1e-05 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 1e-05 | ||
| 2z7x_B | 520 | Crystal Structure Of The Tlr1-Tlr2 Heterodimer Indu | 1e-05 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 1e-05 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 1e-05 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 1e-05 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 1e-05 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 1e-05 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-05 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-05 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 2e-05 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 2e-05 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 2e-05 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 2e-05 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 2e-05 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 2e-05 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 2e-05 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 2e-05 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 2e-05 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 2e-05 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 3e-05 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 3e-05 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 3e-05 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 3e-05 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 3e-05 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 3e-05 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 3e-05 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 3e-05 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 3e-05 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 3e-05 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 3e-05 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 3e-05 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 3e-05 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 3e-05 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 3e-05 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 3e-05 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 3e-05 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 3e-05 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 3e-05 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 3e-05 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 4e-05 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 4e-05 | ||
| 3vhe_A | 359 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 4e-05 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 4e-05 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 4e-05 | ||
| 3vid_A | 356 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 4e-05 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 4e-05 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 4e-05 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 4e-05 | ||
| 3kj4_A | 286 | Structure Of Rat Nogo Receptor Bound To 1d9 Antagon | 4e-05 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 4e-05 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 4e-05 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 4e-05 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 4e-05 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 5e-05 | ||
| 1y6a_A | 366 | Crystal Structure Of Vegfr2 In Complex With A 2-Ani | 5e-05 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 5e-05 | ||
| 3vhk_A | 368 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-05 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 5e-05 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 5e-05 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 5e-05 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 5e-05 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 6e-05 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 6e-05 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 6e-05 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 6e-05 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 6e-05 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 6e-05 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 6e-05 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 7e-05 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 7e-05 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 7e-05 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 9e-05 | ||
| 4b8c_D | 727 | Nuclease Module Of The Yeast Ccr4-Not Complex Lengt | 1e-04 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 1e-04 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 1e-04 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 1e-04 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 2e-04 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 2e-04 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 2e-04 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 2e-04 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 2e-04 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 2e-04 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 2e-04 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 2e-04 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 2e-04 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 3e-04 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 3e-04 | ||
| 1p8t_A | 285 | Crystal Structure Of Nogo-66 Receptor Length = 285 | 3e-04 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 3e-04 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 3e-04 | ||
| 1ozn_A | 285 | 1.5a Crystal Structure Of The Nogo Receptor Ligand | 4e-04 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 4e-04 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 4e-04 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 4e-04 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex Length = 462 | Back alignment and structure |
|
| >pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex Length = 462 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte Receptors A29 Length = 270 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R2.1 In Complex With Hen Egg Lysozyme Length = 251 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor Vlra.R5.1 Length = 251 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 279 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 272 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria Monocytogenes Str. 4b F2365 At 1.91 A Resolution Length = 347 | Back alignment and structure |
|
| >pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria Monocytogenes Str. 4b F2365 At 1.91 A Resolution Length = 347 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By Binding Of A Tri-Acylated Lipopeptide Length = 520 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist Antibody Length = 286 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex Length = 727 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor Length = 285 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding Domain Reveals A Convergent Recognition Scaffold Mediating Inhibition Of Myelination Length = 285 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 964 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 0.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-169 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 3e-10 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-109 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-101 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-87 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-104 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 6e-66 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 4e-32 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-102 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 9e-81 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 4e-57 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 2e-94 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 2e-93 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 4e-78 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 5e-77 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 1e-41 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 7e-27 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 7e-90 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 5e-89 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-70 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 8e-90 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 2e-77 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 3e-75 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-51 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-83 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 5e-68 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-55 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 5e-36 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 7e-79 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 3e-75 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 9e-70 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-61 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 8e-43 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-35 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 1e-68 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-67 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-21 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-07 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-62 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-40 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 4e-36 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 2e-28 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 6e-28 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 6e-61 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 5e-60 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 1e-58 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-56 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 9e-52 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 8e-49 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 8e-48 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-27 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 2e-58 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 1e-57 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 1e-57 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 1e-55 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 3e-55 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 1e-46 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-33 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 4e-25 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 3e-06 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 4e-55 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 3e-48 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 5e-46 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 4e-53 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 4e-53 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 5e-53 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-48 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-48 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 9e-47 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 5e-36 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 1e-29 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-23 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-15 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 2e-52 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 5e-52 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 6e-52 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 1e-51 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 6e-51 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 3e-50 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-48 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 6e-48 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 6e-47 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-45 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-37 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-28 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 5e-25 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 2e-49 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 9e-47 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 3e-41 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-23 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 3e-13 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-12 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-46 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-42 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-41 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 3e-37 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-36 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 3e-34 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 3e-12 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 4e-45 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 5e-42 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 8e-41 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 2e-36 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 2e-35 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 7e-22 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 5e-44 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 3e-43 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 2e-42 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 5e-38 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 3e-36 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-33 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 9e-27 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-25 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-43 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 3e-37 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 3e-26 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 3e-09 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 7e-42 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 7e-40 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 3e-32 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 3e-16 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 7e-42 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-39 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-33 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 4e-30 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-19 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 3e-40 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-34 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 4e-34 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 4e-21 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 5e-40 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-39 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 4e-38 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-29 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-18 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-08 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 5e-06 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 5e-37 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 5e-37 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-35 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 6e-37 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 5e-36 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-32 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-31 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-31 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 4e-25 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 4e-12 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 1e-34 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 2e-33 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 2e-33 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 1e-26 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 5e-25 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 1e-34 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 2e-34 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 2e-34 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-34 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-30 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-27 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 2e-22 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-11 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 6e-34 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 1e-33 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 2e-33 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 7e-33 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 1e-32 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 2e-32 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 2e-32 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 3e-32 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 3e-32 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 4e-32 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 4e-32 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 4e-32 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 8e-32 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 8e-32 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 9e-32 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 1e-31 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 2e-31 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 2e-31 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 2e-31 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 4e-31 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 4e-31 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-27 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 4e-23 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-22 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-20 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 4e-31 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 5e-31 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 5e-31 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 6e-31 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 7e-31 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 7e-31 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 6e-28 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-24 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-23 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 7e-23 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 9e-23 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-22 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 4e-21 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 8e-31 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 2e-30 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 2e-30 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 3e-30 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 3e-30 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 4e-30 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 4e-30 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 6e-28 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-25 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-17 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 1e-14 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-07 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 8e-06 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 4e-30 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 4e-30 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 5e-30 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 6e-30 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 6e-30 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 4e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 7e-23 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 9e-22 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 1e-20 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-19 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-12 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-06 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 7e-30 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 7e-30 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-29 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 5e-24 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-23 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 3e-22 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 3e-19 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 8e-16 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-12 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 2e-29 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 2e-29 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 2e-29 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-29 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-26 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-26 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-18 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-14 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 2e-29 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 3e-29 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 4e-29 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 6e-29 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 1e-28 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 1e-28 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 1e-28 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 1e-28 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 2e-28 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 2e-28 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 2e-28 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 2e-28 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 2e-28 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 2e-28 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 3e-28 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 3e-28 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 3e-26 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-24 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-21 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 3e-21 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 3e-21 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 3e-28 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 3e-28 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-28 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 7e-23 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-17 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-08 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-04 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 5e-28 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 8e-28 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 8e-28 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 1e-27 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 1e-27 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 2e-27 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 2e-27 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 2e-27 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 2e-27 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 2e-27 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-27 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-21 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-17 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 8e-17 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 1e-13 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-13 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 2e-27 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 3e-27 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 3e-27 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 4e-27 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 4e-27 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 5e-27 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 6e-27 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 6e-27 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 6e-27 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 7e-27 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 1e-26 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 1e-26 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 2e-26 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 2e-26 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 2e-26 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 3e-26 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 3e-26 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 4e-26 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 5e-26 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 6e-26 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 7e-26 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 8e-26 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 8e-26 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 9e-26 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 1e-25 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 1e-25 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 1e-25 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 1e-25 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 1e-25 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 1e-25 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 1e-25 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 1e-25 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 2e-25 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 2e-25 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 2e-25 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 2e-25 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 2e-25 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 8e-25 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 1e-24 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 1e-24 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 1e-24 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 2e-24 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 2e-24 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 2e-24 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 3e-24 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 3e-24 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 3e-24 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 7e-24 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 4e-22 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 1e-18 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 5e-10 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 1e-07 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 7e-24 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 7e-24 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 1e-23 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 4e-21 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 3e-19 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 3e-14 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 6e-14 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 1e-23 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 1e-23 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 1e-23 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 1e-23 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-23 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-18 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 4e-17 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-13 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-09 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 2e-23 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 6e-23 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 7e-23 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 1e-22 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 1e-22 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 2e-22 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-22 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-21 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-19 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 5e-17 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-16 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 6e-15 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 8e-15 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 4e-22 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 9e-22 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 2e-21 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 4e-21 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 5e-21 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 1e-18 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-17 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 4e-12 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 1e-20 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 1e-20 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 4e-18 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 5e-14 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-13 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 3e-13 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 1e-20 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 6e-20 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 6e-20 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-18 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 7e-15 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 5e-14 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-08 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 3e-08 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-19 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 4e-18 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-16 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-13 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 6e-10 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 6e-05 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 5e-19 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-18 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-15 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-13 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 2e-09 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 6e-18 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 6e-18 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 4e-11 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 5e-11 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 9e-11 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 1e-09 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 7e-07 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 5e-04 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 9e-18 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-14 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 3e-14 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-17 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 2e-17 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 4e-10 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-08 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-07 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 2e-07 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-04 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 3e-04 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 1e-17 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 1e-12 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 7e-11 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 2e-07 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 2e-17 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 2e-17 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 6e-17 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 7e-17 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 9e-17 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 1e-13 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 1e-11 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-10 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-06 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-05 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-04 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 1e-16 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 1e-16 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 1e-16 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-16 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 1e-10 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-08 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 5e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 1e-06 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 2e-16 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 3e-16 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 7e-16 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 7e-16 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 8e-16 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 1e-15 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 1e-15 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 1e-15 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 1e-15 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 2e-15 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 2e-15 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 2e-15 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 3e-15 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 2e-09 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 4e-09 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 6e-09 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-06 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 4e-05 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 5e-15 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 5e-15 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 6e-15 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 6e-15 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 7e-15 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 8e-15 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 9e-15 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 2e-14 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 3e-09 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 7e-09 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 3e-08 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 4e-07 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 5e-07 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-05 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 1e-14 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 1e-14 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 1e-14 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 1e-14 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 2e-14 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 3e-14 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 3e-14 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 3e-14 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 3e-14 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 4e-14 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 5e-14 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 9e-14 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 9e-14 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 9e-14 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 1e-13 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 1e-13 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 2e-13 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 2e-13 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 2e-13 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 3e-13 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 3e-12 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 7e-10 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 1e-06 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 7e-06 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 3e-04 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 4e-13 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 4e-13 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 4e-13 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 5e-13 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 7e-13 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-10 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-07 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 1e-05 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 1e-04 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-04 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-04 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 1e-12 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 2e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 4e-12 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 5e-12 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-11 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-10 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 4e-10 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-09 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-09 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 4e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-06 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-06 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 4e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 8e-05 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 2e-11 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 2e-11 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 4e-11 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 4e-11 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 1e-09 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 6e-07 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 8e-11 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 1e-10 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 1e-10 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 2e-10 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 2e-10 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 5e-06 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 1e-04 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 3e-04 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 2e-10 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 3e-10 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 9e-06 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 3e-04 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 3e-04 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 3e-10 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-10 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-05 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-05 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 2e-09 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-09 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 1e-07 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-06 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-09 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 6e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-05 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-05 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-05 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-04 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 3e-09 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 6e-09 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 8e-09 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 9e-09 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-08 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 2e-06 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 7e-04 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 2e-08 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 4e-08 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 1e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 5e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 5e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 7e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 1e-05 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 1e-07 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 5e-07 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 9e-07 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 3e-05 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 4e-05 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 2e-04 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 4e-06 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 2e-05 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 5e-06 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 9e-06 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 1e-05 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 2e-05 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 2e-05 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 2e-05 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 3e-05 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 4e-05 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 8e-05 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 5e-04 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 546 bits (1408), Expect = 0.0
Identities = 172/567 (30%), Positives = 255/567 (44%), Gaps = 18/567 (3%)
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
++++S + + S L +LD++ N+L G+ I T+LK LN+SSN F G
Sbjct: 204 FLDVSSNNFSTGIPFL--GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVG 261
Query: 123 KIPSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSIGNLSS 180
IP L +L+ L + N G IP+ G +L L L GNH G +P G+ S
Sbjct: 262 PIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319
Query: 181 LVGLYLYNNSLPGSIP-SSIGNLSNLVYLFLKKNHLRGPIPSSFGYLR-KLTKLELSNNQ 238
L L L +N+ G +P ++ + L L L N G +P S L L L+LS+N
Sbjct: 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 379
Query: 239 LSGSIPQEIGNLKL--LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIG 296
SG I + L +L L N G +P +LSN S L LHL N LSG IP +G
Sbjct: 380 FSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG 439
Query: 297 NFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEK 356
+ L L + N G +PQ + +L+ + N G +P L NCT+L + L
Sbjct: 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN 499
Query: 357 NQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIG 416
N+L G I G NL + LS N F G + + +C L L + N G IP +
Sbjct: 500 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Query: 417 NATQLHELDFSSNHLVGKVPLELANLTSLNDLIL--NGNQLSGGIPPELGLLTDLGYLDL 474
+ ++N + GK + + N + N + G +L L+ ++
Sbjct: 560 KQS----GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNI 615
Query: 475 SANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPE 534
++ + + +L+MS N S IP ++G + L L+L HN + G IP E
Sbjct: 616 TSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE 675
Query: 535 ICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQ 594
+ +L L L+LS N L G IP + L ID+S N L GPIP + F P
Sbjct: 676 VGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFL 735
Query: 595 GNKGLCGEVSGLQPCKALKSYKHVHRK 621
N GLCG L C + + H +
Sbjct: 736 NNPGLCG--YPLPRCDPSNADGYAHHQ 760
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 512 bits (1321), Expect = e-169
Identities = 173/591 (29%), Positives = 267/591 (45%), Gaps = 35/591 (5%)
Query: 6 ASNSIEA-ARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISI 64
S S+ L+ +K L + +LLP W+ + PCT+ G++C ++ SI
Sbjct: 6 PSQSLYREIHQLISFKDVL--PDKNLLPDWSSN-------KNPCTFDGVTCRD-DKVTSI 55
Query: 65 NLTSTSLKGTLDQFPFSLF--SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
+L+S L SL + L L L+ + + G++ L L+LS N SG
Sbjct: 56 DLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSG-FKCSASLTSLDLSRNSLSG 114
Query: 123 KIPS--EIGLLTNLEVLHMFVNHLNGSIP--EIGHLSSLKNLALDGNHLDGPIPVSI--- 175
+ + +G + L+ L++ N L+ L+SL+ L L N + G V
Sbjct: 115 PVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLS 174
Query: 176 GNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235
L L + N + G + + NL +L + N+ IP G L L++S
Sbjct: 175 DGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDIS 231
Query: 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI 295
N+LSG + I L L++S NQ G +P L SL+ L L +N+ +G IP +
Sbjct: 232 GNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFL 289
Query: 296 -GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK-TLRNCTSLERVR 353
G L L + GN F G +P L+ ++ N F G LP TL L+ +
Sbjct: 290 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLD 349
Query: 354 LEKNQLIGNISDDFG-IYPNLKLFDLSYNKFYGELSSNWWNCP--QLGILKIAGNNITGG 410
L N+ G + + + +L DLS N F G + N P L L + N TG
Sbjct: 350 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 409
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLG 470
IPP + N ++L L S N+L G +P L +L+ L DL L N L G IP EL + L
Sbjct: 410 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469
Query: 471 YLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGE 530
L L N + IP + L+++++S+N + EIP +G+L L+ L LS+N G
Sbjct: 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Query: 531 IPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPS 581
IP E+ + SL L+L+ N +G+IP S I+ N + G
Sbjct: 530 IPAELGDCRSLIWLDLNTNLFNGTIPAAM----FKQSGKIAANFIAGKRYV 576
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 3e-10
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 517 LSELDLSHNLLR---GEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573
++ +DLS L + + +L LE L LS+++++GS+ F+ L S+D+S N
Sbjct: 52 VTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRN 110
Query: 574 ELDGPIPSIEAFRH 587
L GP+ ++ +
Sbjct: 111 SLSGPVTTLTSLGS 124
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 350 bits (901), Expect = e-109
Identities = 132/574 (22%), Positives = 206/574 (35%), Gaps = 34/574 (5%)
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
+NL L L F+ ++L+ L L N + +P L L+LS N S
Sbjct: 77 VLNLQHNELSQ-LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS 135
Query: 123 KIPSEIGLLTNLEVLHMFVNHLNGSIPE---IGHLSSLKNLALDGNHLDGPIPVSIGNLS 179
L NL+ L + N + E I SSLK L L N + P +
Sbjct: 136 TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIG 195
Query: 180 SLVGLYLYNNSLPGSIPSSIG---NLSNLVYLFLKKNHLRGPIPSSFGYLR--KLTKLEL 234
L GL+L N L S+ + +++ L L + L ++F L+ LT L+L
Sbjct: 196 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255
Query: 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN--------- 285
S N L+ L L L N ++ SL L ++ L+L +
Sbjct: 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLA 315
Query: 286 QLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYF-IGSLP-KTL 343
L L L++ N G +L+Y S+ +++ + +L +T
Sbjct: 316 SLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETF 375
Query: 344 RNC--TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSN-WWNCPQLGIL 400
+ + L + L KN++ SD F +L++ DL N+ EL+ W + +
Sbjct: 376 VSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEI 435
Query: 401 KIAGNNITGGIPPEIGNATQLHELDFSSNHL--VGKVPLELANLTSLNDLILNGNQLSGG 458
++ N L L L V P L +L L L+ N ++
Sbjct: 436 YLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 495
Query: 459 IPPELGLLTDLGYLDLSANRFSK--------SIPGNMGYLLKLHYLNMSSNEFSQEIPIQ 510
L L L LDL N ++ + L LH LN+ SN F +
Sbjct: 496 NDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEV 555
Query: 511 LGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFE-NMHGLLSID 569
L +L +DL N L N SL+ LNL N ++ F L +D
Sbjct: 556 FKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELD 615
Query: 570 ISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEV 603
+ +N D SI F + E L
Sbjct: 616 MRFNPFDCTCESIAWFVNWINETHTNIPELSSHY 649
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 330 bits (849), Expect = e-101
Identities = 107/524 (20%), Positives = 185/524 (35%), Gaps = 46/524 (8%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
L Q P L ++++ L+L NQL + ++L L++ N S P L L
Sbjct: 16 LTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPML 75
Query: 135 EVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
+VL+ L N L + ++L L+L +NS+
Sbjct: 76 KVLN-----------------------LQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 112
Query: 195 IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKL-- 252
+ NL+ L L N L + L L +L LSNN++ +E+
Sbjct: 113 KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSS 172
Query: 253 LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN---LNSLSVGGN 309
L L LS NQ++ P + L L L + QL + +++ + + +LS+ +
Sbjct: 173 LKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNS 232
Query: 310 QFTGFLPQNI--CQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDF 367
Q + + +L + N + LE LE N + S
Sbjct: 233 QLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSL 292
Query: 368 GIYPNLKLFDLSYNKFYGELSSN---------WWNCPQLGILKIAGNNITGGIPPEIGNA 418
N++ +L + +S + L L + N+I G
Sbjct: 293 HGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL 352
Query: 419 TQLHELDFSSNHLVGKVPLELA----NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDL 474
L L S++ + + L+ L L N++S L L LDL
Sbjct: 353 INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDL 412
Query: 475 SANRFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG--EI 531
N + + G L + + +S N++ Q + L L L L+
Sbjct: 413 GLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSS 472
Query: 532 PPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
P L +L L+LS+NN++ E + L +D+ +N L
Sbjct: 473 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNL 516
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 294 bits (754), Expect = 1e-87
Identities = 109/477 (22%), Positives = 176/477 (36%), Gaps = 23/477 (4%)
Query: 132 TNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSL 191
+ EV L +P+ +++ L L N L + S L L + N++
Sbjct: 4 VSHEVADCSHLKLT-QVPD-DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 192 PGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLK 251
P L L L L+ N L +F + LT+L L +N + K
Sbjct: 62 SKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQK 121
Query: 252 LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF--MNLNSLSVGGN 309
L L LS N L T + L +L+ L L +N++ +E+ F +L L + N
Sbjct: 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181
Query: 310 QFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLR---NCTSLERVRLEKNQLIGNISDD 366
Q F P G L +++ SL + L TS+ + L +QL +
Sbjct: 182 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241
Query: 367 FG--IYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHEL 424
F + NL + DLSYN + ++ PQL + NNI + + L
Sbjct: 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL 301
Query: 425 DFSSN---------HLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLS 475
+ + L L L L + N + G L +L YL LS
Sbjct: 302 NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS 361
Query: 476 ANRFS-KSIPGNMGYLL---KLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEI 531
+ S +++ L LH LN++ N+ S+ L L LDL N + E+
Sbjct: 362 NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421
Query: 532 PP-EICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRH 587
E LE++ ++ LS+N +F + L + + L S F+
Sbjct: 422 TGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQP 478
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 337 bits (866), Expect = e-104
Identities = 92/613 (15%), Positives = 178/613 (29%), Gaps = 78/613 (12%)
Query: 1 FSLNVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWS---GISCNH 57
L+ + I+ L + L N S T N W G+S N
Sbjct: 20 IKLSRTAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNS 79
Query: 58 AGRIISINLTSTSLKGTLDQFPFSLF--SHLSYLDLNENQLYGN----IPSPIGNLTKLK 111
GR+ ++L G + P ++ + L L L + N P I +
Sbjct: 80 NGRVTGLSLEGFGASGRV---PDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDE 136
Query: 112 FLNLSSNHFSGKIPSEIGLL--TNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLD 168
H+ ++L + + SI + N++
Sbjct: 137 QKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNIT 196
Query: 169 GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRK 228
+ ++ L+ L Y+ N+ N Y + L+
Sbjct: 197 F-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEY-----AQQYKTEDLKWDNLKD 250
Query: 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR--------GTVPSSLSNLSSLEIL 280
LT +E+ N +P + L + ++++ N+ + ++I+
Sbjct: 251 LTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310
Query: 281 HLYDNQL-SGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSL 339
++ N L + + + L L NQ G LP L ++ N
Sbjct: 311 YIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIP 369
Query: 340 PKTLRNCTSLERVRLEKNQLIGNISDDFGIY--PNLKLFDLSYNKFYGELSSNWWNCPQL 397
+E + N+L I + F + D SYN+
Sbjct: 370 ANFCGFTEQVENLSFAHNKL-KYIPNIFDAKSVSVMSAIDFSYNEIGS------------ 416
Query: 398 GILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSG 457
+ P + ++ S+N + + + L+ + L GN L+
Sbjct: 417 -----VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE 471
Query: 458 GIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIP--IQLGKLV 515
IP K N L +++ N+ + ++ + L
Sbjct: 472 -IPKNSL----------------KDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLP 513
Query: 516 QLSELDLSHNLLRGEIPPEICNLESLEKLNLSH------NNLSGSIPTNFENMHGLLSID 569
L +DLS+N P + N +L+ + + N P L +
Sbjct: 514 YLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQ 572
Query: 570 ISYNELDGPIPSI 582
I N++ I
Sbjct: 573 IGSNDIRKVNEKI 585
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 233 bits (595), Expect = 6e-66
Identities = 60/382 (15%), Positives = 133/382 (34%), Gaps = 40/382 (10%)
Query: 60 RIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQL--------YGNIPSPIGNLTKLK 111
+ + + + L F + +++ N+ + K++
Sbjct: 250 DLTDVEVYNCPNLTKLPTF-LKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQ 308
Query: 112 FLNLSSNHF-SGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGP 170
+ + N+ + + + + + L +L N L G +P G L +L L N +
Sbjct: 309 IIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQITEI 368
Query: 171 IPVSIGNLSSLVGLYLYNNSLPGSIPS--SIGNLSNLVYLFLKKNHLRG-------PIPS 221
G + L +N L IP+ ++S + + N + P+
Sbjct: 369 PANFCGFTEQVENLSFAHNKL-KYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP 427
Query: 222 SFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG-------TVPSSLSNL 274
+ ++ + LSNNQ+S + L+ ++L N L + N
Sbjct: 428 TPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNT 487
Query: 275 SSLEILHLYDNQLSGHIPQEI--GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHD 332
L + L N+L+ + + L + + N F+ P S +L+ F + +
Sbjct: 488 YLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRN 545
Query: 333 ------NYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGE 386
N + P+ + C SL ++++ N + +++ I PN+ + D+ N
Sbjct: 546 QRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNE--KITPNISVLDIKDNPNISI 602
Query: 387 LSSNWWNCPQLGILKIAGNNIT 408
S + G+ + +
Sbjct: 603 DLSYVCPYIEAGMYMLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 4e-32
Identities = 30/260 (11%), Positives = 72/260 (27%), Gaps = 28/260 (10%)
Query: 328 FSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGEL 387
F+ + + +L + + + LE G + D G L++ L +
Sbjct: 62 FNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKV-- 119
Query: 388 SSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVP--LELANLTSL 445
N P I + H + + L
Sbjct: 120 ------------------NERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDL 161
Query: 446 NDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ 505
+N + I + + +N + + + L KL M ++ F
Sbjct: 162 IKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNIT-FVSKAVMRLTKLRQFYMGNSPFVA 220
Query: 506 EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGL 565
E + + + + + NL+ L + + + +PT + + +
Sbjct: 221 ENICEAWEN-----ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEM 275
Query: 566 LSIDISYNELDGPIPSIEAF 585
I+++ N + +
Sbjct: 276 QLINVACNRGISGEQLKDDW 295
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 332 bits (853), Expect = e-102
Identities = 107/553 (19%), Positives = 190/553 (34%), Gaps = 54/553 (9%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
+ P +L LDL+ N L + +L+ L+LS L++L
Sbjct: 19 FYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL 78
Query: 135 EVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG 193
L + N + LSSL+ L +L IG+L +L L + +N +
Sbjct: 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138
Query: 194 -SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT----KLELSNNQLSGSIPQEIG 248
+P NL+NL +L L N ++ + L ++ L+LS N ++ P
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK 198
Query: 249 NLKLLTDLSLSQNQLRGTVPS-SLSNLSSLEILHLYDNQLSGH----------------- 290
++L L+L N V + L+ LE+ L +
Sbjct: 199 EIRLHK-LTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257
Query: 291 ----------------IPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNY 334
I N++S S+ + Q+ + +
Sbjct: 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCK 315
Query: 335 FIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNK--FYGELSSNWW 392
F L++ L G + P+L+ DLS N F G S + +
Sbjct: 316 FGQFPTLKLKSLKRLTF-----TSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 370
Query: 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLE-LANLTSLNDLILN 451
L L ++ N + + QL LDF ++L +L +L L ++
Sbjct: 371 GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 429
Query: 452 GNQLSGGIPPELGLLTDLGYLDLSANRFSKSI-PGNMGYLLKLHYLNMSSNEFSQEIPIQ 510
L+ L L ++ N F ++ P L L +L++S + Q P
Sbjct: 430 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489
Query: 511 LGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLS-ID 569
L L L++SHN L SL+ L+ S N++ S ++ L+ ++
Sbjct: 490 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 549
Query: 570 ISYNELDGPIPSI 582
++ N+
Sbjct: 550 LTQNDFACTCEHQ 562
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 273 bits (700), Expect = 9e-81
Identities = 103/497 (20%), Positives = 177/497 (35%), Gaps = 33/497 (6%)
Query: 106 NLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDG 164
+ + + + N + IP L + + L + N L L+ L L
Sbjct: 6 VVPNITYQCMELNFYK--IPD--NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSR 61
Query: 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFG 224
+ + +LS L L L N + + LS+L L + +L G
Sbjct: 62 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIG 121
Query: 225 YLRKLTKLELSNNQL-SGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEI---- 279
+L+ L +L +++N + S +P+ NL L L LS N+++ + L L + +
Sbjct: 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 181
Query: 280 LHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS-GSLQYFSVHDNYFIGS 338
L L N ++ I + L+ L++ N + + + Q L+ + F
Sbjct: 182 LDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE 240
Query: 339 L------PKTLRNCTSLERVRLEKNQL---IGNISDDFGIYPNLKLFDLSYNKFYGELSS 389
L +L L + +I D F N+ F L
Sbjct: 241 GNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDF 300
Query: 390 NWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLI 449
+ L++ ++ + L L F+SN +L SL L
Sbjct: 301 S--YNFGWQHLELVNCKFGQFPTLKLKS---LKRLTFTSNKGGN--AFSEVDLPSLEFLD 353
Query: 450 LNGNQLS--GGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEI 507
L+ N LS G T L YLDLS N ++ N L +L +L+ + Q
Sbjct: 354 LSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMS 412
Query: 508 PIQ-LGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-FENMHGL 565
L L LD+SH R L SLE L ++ N+ + + F + L
Sbjct: 413 EFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 472
Query: 566 LSIDISYNELDGPIPSI 582
+D+S +L+ P+
Sbjct: 473 TFLDLSQCQLEQLSPTA 489
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 4e-57
Identities = 75/384 (19%), Positives = 125/384 (32%), Gaps = 21/384 (5%)
Query: 60 RIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQL------YGNIPSPIGNLTKLKFL 113
+ + L +G L++F S L L + E +L +I LT +
Sbjct: 228 EVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSF 287
Query: 114 NLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPV 173
+L S + + L + L SLK L G
Sbjct: 288 SLVSVTIER--VKDFSYNFGWQHLELVNCKFGQFPT--LKLKSLKRLTF--TSNKGGNAF 341
Query: 174 SIGNLSSLVGLYLYNNSL--PGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTK 231
S +L SL L L N L G S ++L YL L N + + S+F L +L
Sbjct: 342 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEH 400
Query: 232 LELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGH 290
L+ ++ L + +L+ L L +S R + LSSLE+L + N +
Sbjct: 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460
Query: 291 I-PQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSL 349
P NL L + Q P SLQ ++ N F + SL
Sbjct: 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 520
Query: 350 ERVRLEKNQLIGNISDDFG-IYPNLKLFDLSYNKFYGELSSNW--WNCPQLGILKIAGNN 406
+ + N ++ + + +L +L+ N F L +
Sbjct: 521 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVER 580
Query: 407 ITGGIPPEIGNATQLHELDFSSNH 430
+ P + + L+ +
Sbjct: 581 MECATPSDKQG-MPVLSLNITCQM 603
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 300 bits (771), Expect = 2e-94
Identities = 101/295 (34%), Positives = 157/295 (53%), Gaps = 20/295 (6%)
Query: 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKA 740
E+ + +NF +GRGG+G VYK L G VAVK+L + +F +E++
Sbjct: 22 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL-KEERTQGGELQFQTEVEM 80
Query: 741 LTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL--SSETATEMDWSKRVNVIKGV 798
++ HRN+++ GFC LVY Y+ GS+A L E+ +DW KR + G
Sbjct: 81 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 140
Query: 799 AHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS-ELAGTYG 857
A L+Y+H C P I+HRDV + N+LLD E+EA V DFG AKL+ ++ + + GT G
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 200
Query: 858 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANM--------- 908
++APE T K +EK DV+ +GV+ LE+I GQ DL +D +
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD---VMLLDWVKGLLK 257
Query: 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963
+ ++ + D L +++++ +I+VAL C ++P RP M V ++L G
Sbjct: 258 EKKLEALVDVDLQ----GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 297 bits (762), Expect = 2e-93
Identities = 95/302 (31%), Positives = 143/302 (47%), Gaps = 19/302 (6%)
Query: 16 LLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCN---HAGRIISINLTSTSLK 72
LL+ K L N L SW T TW G+ C+ R+ +++L+ +L
Sbjct: 11 LLQIKKDLGNPTT--LSSW-----LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLP 63
Query: 73 GTLDQFPFSL--FSHLSYLDL-NENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIG 129
P SL +L++L + N L G IP I LT+L +L ++ + SG IP +
Sbjct: 64 KPY-PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 130 LLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLV-GLYLY 187
+ L L N L+G++P I L +L + DGN + G IP S G+ S L + +
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182
Query: 188 NNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI 247
N L G IP + NL NL ++ L +N L G FG + K+ L+ N L+ + ++
Sbjct: 183 RNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KV 240
Query: 248 GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVG 307
G K L L L N++ GT+P L+ L L L++ N L G IPQ GN + +
Sbjct: 241 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYA 299
Query: 308 GN 309
N
Sbjct: 300 NN 301
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 256 bits (657), Expect = 4e-78
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 28/307 (9%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG--KIPSEIGLLTNLEV 136
P +L S L D G + ++ L+LS + IPS + L L
Sbjct: 21 PTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80
Query: 137 LHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIP 196
L++ N+L GPIP +I L+ L LY+ + ++ G+IP
Sbjct: 81 LYIG----------------------GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP 118
Query: 197 SSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNL-KLLTD 255
+ + LV L N L G +P S L L + N++SG+IP G+ KL T
Sbjct: 119 DFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTS 178
Query: 256 LSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFL 315
+++S+N+L G +P + +NL +L + L N L G G+ N + + N L
Sbjct: 179 MTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237
Query: 316 PQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKL 375
+ + S +L + +N G+LP+ L L + + N L G I G +
Sbjct: 238 GK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDV 295
Query: 376 FDLSYNK 382
+ NK
Sbjct: 296 SAYANNK 302
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 253 bits (649), Expect = 5e-77
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 8/282 (2%)
Query: 332 DNYFIGSLPKTLRNCTSLERVRLEKNQLIG--NISDDFGIYPNLKLFDLS-YNKFYGELS 388
+ ++G L T + + L L I P L + N G +
Sbjct: 35 NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP 94
Query: 389 SNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDL 448
QL L I N++G IP + L LDFS N L G +P +++L +L +
Sbjct: 95 PAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154
Query: 449 ILNGNQLSGGIPPELGLLTDLG-YLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEI 507
+GN++SG IP G + L + +S NR + IP L L ++++S N +
Sbjct: 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDA 213
Query: 508 PIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLS 567
+ G ++ L+ N L ++ ++ ++L L+L +N + G++P + L S
Sbjct: 214 SVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHS 272
Query: 568 IDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPC 609
+++S+N L G IP + V A NK LCG S L C
Sbjct: 273 LNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG--SPLPAC 312
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 1e-41
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Query: 411 IPPEIGNATQL----HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSG--GIPPELG 464
I ++GN T L D + +G + +N+L L+G L IP L
Sbjct: 14 IKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73
Query: 465 LLTDLGYLDLS-ANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLS 523
L L +L + N IP + L +LHYL ++ S IP L ++ L LD S
Sbjct: 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFS 133
Query: 524 HNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLL-SIDISYNELDGPIPS 581
+N L G +PP I +L +L + N +SG+IP ++ + L S+ IS N L G IP
Sbjct: 134 YNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPP 192
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 7e-27
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 61 IISINLTSTSLKGTLDQFPFSLFS-HLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNH 119
S+ ++ L G + P + + +L+++DL+ N L G+ G+ + ++L+ N
Sbjct: 176 FTSMTISRNRLTGKI---PPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232
Query: 120 FSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNHLDGPIPVSIGNL 178
+ + +GL NL L + N + G++P + L L +L + N+L G IP GNL
Sbjct: 233 LAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNL 290
Query: 179 SSLVGLYLYNNSLPGSIP 196
NN P
Sbjct: 291 QRFDVSAYANNKCLCGSP 308
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 305 bits (782), Expect = 7e-90
Identities = 98/634 (15%), Positives = 192/634 (30%), Gaps = 67/634 (10%)
Query: 4 NVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWS-GISCNHAGRII 62
NV E A + +KA +W N W+ + G
Sbjct: 256 NVPIQLKETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQP 315
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
++L + ++ L L G +P IG LT+LK L+ ++ +
Sbjct: 316 GVDLDNNG--------------RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETV 361
Query: 123 KIPSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHL-----DGPIPVSI 175
++ + + + + + L L + + PI
Sbjct: 362 SGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421
Query: 176 GNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235
+ N + I +I L+ L ++ + +
Sbjct: 422 RISLKDTQIGNLTNRI-TFISKAIQRLTKLQIIYFANSPFTYDNIAVD-----WEDANSD 475
Query: 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG------ 289
+ + NLK LTD+ L +P L +L L+ L++ N+
Sbjct: 476 YAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKA 535
Query: 290 ---HIPQEIGNFMNLNSLSVGGNQFTGF-LPQNICQSGSLQYFSVHDNYFIGSLPKTLRN 345
+ + + +G N F ++ + L N + L
Sbjct: 536 DWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHN-KVRHLE-AFGT 593
Query: 346 CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYG-ELSSNWWNCPQLGILKIAG 404
L ++L+ NQ+ D ++ S+NK N + +G + +
Sbjct: 594 NVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSY 653
Query: 405 NNITG-----GIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS--- 456
N I + + S N + A + ++ +IL+ N ++
Sbjct: 654 NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIP 713
Query: 457 ----GGIPPELGLLTDLGYLDLSANRFSKSIPGNM--GYLLKLHYLNMSSNEFSQEIPIQ 510
L +DL N+ + S+ + L L +++S N FS P Q
Sbjct: 714 ENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFS-SFPTQ 771
Query: 511 LGKLVQLSELDLSHNL------LRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHG 564
QL + H + + P I SL +L + N++ +
Sbjct: 772 PLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEKL--TPQ 828
Query: 565 LLSIDISYNEL-DGPIPSIEAFRHAPVEALQGNK 597
L +DI+ N + S+ + A + L +K
Sbjct: 829 LYILDIADNPNISIDVTSVCPYIEAGMYVLLYDK 862
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 302 bits (775), Expect = 5e-89
Identities = 87/634 (13%), Positives = 189/634 (29%), Gaps = 90/634 (14%)
Query: 2 SLNVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATN---ITTPCTWS---GISC 55
L + I+ + L L N + +++ N W G+
Sbjct: 260 QLKETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDL 319
Query: 56 NHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNL 115
++ GR+ ++L KG + + L L + +
Sbjct: 320 DNNGRVTGLSLAGFGAKGRVPDA-IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEE 378
Query: 116 SSNHFSGKIPSE-IGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDG----- 169
+ + L + + + +N PE+ + ++L +
Sbjct: 379 RKHRIRMHYKKMFLDYDQRLNLSDLLQDAIN-RNPEMKPIKKDSRISLKDTQIGNLTNRI 437
Query: 170 -PIPVSIGNLSSLVGLYLYNNSLPG-------------------SIPSSIGNLSNLVYLF 209
I +I L+ L +Y N+ + S NL +L +
Sbjct: 438 TFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497
Query: 210 LKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG---------SIPQEIGNLKLLTDLSLSQ 260
L +P L +L L ++ N+ + + + +
Sbjct: 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGY 557
Query: 261 NQLRG-TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNI 319
N L +SL + L +L N++ H+ G + L L + NQ +P++
Sbjct: 558 NNLEEFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEE-IPEDF 614
Query: 320 CQ-SGSLQYFSVHDNYFIGSLPKT--LRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLF 376
C + ++ N + +P ++ + V N++ + + K
Sbjct: 615 CAFTDQVEGLGFSHNK-LKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGI 673
Query: 377 DLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHL----- 431
+ S + ++ N I + + + S+N +
Sbjct: 674 NAST-------------------VTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPE 714
Query: 432 --VGKVPLELANLTSLNDLILNGNQLSGGIPPELGL--LTDLGYLDLSANRFSKSIPGNM 487
+ N L + L N+L+ + + L L +D+S N FS S P
Sbjct: 715 NSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFS-SFPTQP 772
Query: 488 GYLLKLHYLN------MSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESL 541
+L N ++ P + L +L + N +R ++ ++ L
Sbjct: 773 LNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEKL--TPQL 829
Query: 542 EKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
L+++ N T+ + Y++
Sbjct: 830 YILDIADNPNISIDVTSVCPYIEAGMYVLLYDKT 863
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 2e-70
Identities = 84/510 (16%), Positives = 159/510 (31%), Gaps = 45/510 (8%)
Query: 107 LTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNH 166
LTK + + + I L E L S N + +
Sbjct: 251 LTKDANVPIQLKETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDM 310
Query: 167 LDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYL 226
V + N + GL L G +P +IG L+ L L +
Sbjct: 311 WGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEE 370
Query: 227 RKLTKLELSNNQLSGSIPQE-IGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN 285
E +++ + + + L L Q+ + + + + L D
Sbjct: 371 LTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN--PEMKPIKKDSRISLKDT 428
Query: 286 QLSGH------IPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSL 339
Q+ I + I L + + FT + + Y +
Sbjct: 429 QIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDY-----AKQYENE 483
Query: 340 PKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYG---------ELSSN 390
+ N L V L + + D P L+ +++ N+ L+ +
Sbjct: 484 ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADD 543
Query: 391 WWNCPQLGILKIAGNNITGGIPPE--IGNATQLHELDFSSNHLVGKVPLELANLTSLNDL 448
P++ I + NN+ P + +L LD N + + L DL
Sbjct: 544 EDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKV--RHLEAFGTNVKLTDL 600
Query: 449 ILNGNQLSGGIPPELG-LLTDLGYLDLSANRFSKSIP--GNMGYLLKLHYLNMSSNEFSQ 505
L+ NQ+ IP + + L S N+ IP N + + ++ S N+
Sbjct: 601 KLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGS 658
Query: 506 EIP-----IQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS-------G 553
E + K + S + LS+N ++ + + LS+N ++
Sbjct: 659 EGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLK 718
Query: 554 SIPTNFENMHGLLSIDISYNELDGPIPSIE 583
N++N + L +ID+ +N+L
Sbjct: 719 PKDGNYKNTYLLTTIDLRFNKLTSLSDDFR 748
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 298 bits (764), Expect = 8e-90
Identities = 98/522 (18%), Positives = 182/522 (34%), Gaps = 17/522 (3%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
L++ P +L + L+ + N L + L L FL+L+ L
Sbjct: 24 LNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRL 83
Query: 135 EVLHMFVNHLNGSIPEI-GHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG 193
+ L + N L +LK+L + + + N +L LYL +N +
Sbjct: 84 DTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISS 143
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLEL--SNNQLSGSIPQEIGNLK 251
L L + N + L++ T L L + N ++ I +
Sbjct: 144 IKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA-GIEPGAFDSA 202
Query: 252 LLTDLSLSQNQLRGTVPSSLSN--LSSLEILHLYDNQLSGHIPQEIGNFMNLN--SLSVG 307
+ L+ Q + L N + SL + D P ++ S+++
Sbjct: 203 VFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQ 262
Query: 308 GNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDF 367
+ F LQ + + + LP L ++L+++ L N+
Sbjct: 263 KHYFFNISSNTFHCFSGLQELDLTATH-LSELPSGLVGLSTLKKLVLSANKFENLCQISA 321
Query: 368 GIYPNLKLFDLSYNKFYGELSSNW-WNCPQLGILKIAGNNIT--GGIPPEIGNATQLHEL 424
+P+L + N EL + N L L ++ ++I ++ N + L L
Sbjct: 322 SNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSL 381
Query: 425 DFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE-LGLLTDLGYLDLSANRFSKSI 483
+ S N + L L L +L L L L+LS + S
Sbjct: 382 NLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISS 441
Query: 484 PGNMGYLLKLHYLNMSSNEFSQEIPIQ---LGKLVQLSELDLSHNLLRGEIPPEICNLES 540
L L +LN+ N F + + L L +L L LS L +L+
Sbjct: 442 EQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKM 501
Query: 541 LEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI 582
+ ++LSHN L+ S ++ + ++++ N + +PS+
Sbjct: 502 MNHVDLSHNRLTSSSIEALSHLK-GIYLNLASNHISIILPSL 542
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 264 bits (676), Expect = 2e-77
Identities = 95/488 (19%), Positives = 160/488 (32%), Gaps = 15/488 (3%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHM 139
F L L L N L + + LK L S + LE L++
Sbjct: 77 FQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136
Query: 140 FVNHLNG-SIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLP-GSIPS 197
NH++ +P+ LK L N + + +L L L N I
Sbjct: 137 GSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEP 196
Query: 198 SIGNLSNLVYLFLKKNHLRGPIPS--SFGYLRKLTKLELSNNQLSGSIPQEIGNLKL--L 253
+ + L I ++ L + P L +
Sbjct: 197 GAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSV 256
Query: 254 TDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313
++L ++ ++ S L+ L L LS +P + L L + N+F
Sbjct: 257 ESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFEN 315
Query: 314 FLPQNICQSGSLQYFSVHDNYFIGSL-PKTLRNCTSLERVRLEKNQL--IGNISDDFGIY 370
+ SL + S+ N L L N +L + L + + +
Sbjct: 316 LCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNL 375
Query: 371 PNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELDFSSN 429
+L+ +LSYN+ + + CPQL +L +A + N L L+ S +
Sbjct: 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHS 435
Query: 430 HLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLG---YLDLSANRFSKSIPGN 486
L L +L L L GN G + L LG L LS S
Sbjct: 436 LLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHA 495
Query: 487 MGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNL 546
L ++++++S N + L L + L+L+ N + +P + L +NL
Sbjct: 496 FTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINL 554
Query: 547 SHNNLSGS 554
N L +
Sbjct: 555 RQNPLDCT 562
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 258 bits (661), Expect = 3e-75
Identities = 94/450 (20%), Positives = 157/450 (34%), Gaps = 14/450 (3%)
Query: 142 NHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGN 201
LN IP +S + L N L + L +L L L + + +
Sbjct: 22 LGLN-EIPG-TLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQS 79
Query: 202 LSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQN 261
L L L N L ++ + L L +S + N K L L L N
Sbjct: 80 QHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSN 139
Query: 262 QLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLN--SLSVGGNQFTGFLPQNI 319
+ L++L +N + +++ + SL++ GN G +
Sbjct: 140 HISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPGA 198
Query: 320 CQSGSLQYFSVHDNYFIGSLPKTLRNCT--SLERVRLEKNQLIGNISDDFGIYPNLKL-- 375
S Q + + + K L+N T SL E F + +
Sbjct: 199 FDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVES 258
Query: 376 FDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKV 435
+L + F+ S+ + L L + +++ +P + + L +L S+N
Sbjct: 259 INLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLC 317
Query: 436 PLELANLTSLNDLILNGNQLSGGIPPE-LGLLTDLGYLDLSANRFSKS--IPGNMGYLLK 492
+ +N SL L + GN + L L +L LDLS + S + L
Sbjct: 318 QISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSH 377
Query: 493 LHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEI-CNLESLEKLNLSHNNL 551
L LN+S NE + QL LDL+ L+ + NL L+ LNLSH+ L
Sbjct: 378 LQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLL 437
Query: 552 SGSIPTNFENMHGLLSIDISYNELDGPIPS 581
S F+ + L +++ N
Sbjct: 438 DISSEQLFDGLPALQHLNLQGNHFPKGNIQ 467
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 1e-51
Identities = 76/395 (19%), Positives = 129/395 (32%), Gaps = 14/395 (3%)
Query: 71 LKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTK--LKFLNLSSNHFSGKIPSEI 128
L S L + P+ L + ++ +NL ++F +
Sbjct: 215 LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTF 274
Query: 129 GLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYN 188
+ L+ L + HL+ + LS+LK L L N + +S N SL L +
Sbjct: 275 HCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKG 334
Query: 189 NSLPGSIPS-SIGNLSNLVYLFLKKNHLR--GPIPSSFGYLRKLTKLELSNNQLSGSIPQ 245
N+ + + + NL NL L L + + L L L LS N+ +
Sbjct: 335 NTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTE 394
Query: 246 EIGNLKLLTDLSLSQNQLRG-TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSL 304
L L L+ +L+ S NL L++L+L + L Q L L
Sbjct: 395 AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454
Query: 305 SVGGNQFTGFLPQ---NICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG 361
++ GN F Q ++ G L+ + + + V L N+L
Sbjct: 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS 514
Query: 362 NISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQL 421
+ + + L +L+ N L S Q + + N + N L
Sbjct: 515 SSIEALSHLKGIYL-NLASNHISIILPSLLPILSQQRTINLRQNPLDC----TCSNIYFL 569
Query: 422 HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS 456
+ L N L + L+ LS
Sbjct: 570 EWYKENMQKLEDTEDTLCENPPLLRGVRLSDVTLS 604
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 279 bits (715), Expect = 6e-83
Identities = 113/527 (21%), Positives = 191/527 (36%), Gaps = 28/527 (5%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
L + P + S +DL+ N L N ++L++L+LS L +L
Sbjct: 23 LSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82
Query: 135 EVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG 193
L + N + P L+SL+NL L IG L +L L + +N +
Sbjct: 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHS 142
Query: 194 -SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT----KLELSNNQLSGSIPQEIG 248
+P+ NL+NLV++ L N+++ + +LR+ L++S N + I +
Sbjct: 143 CKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAF 201
Query: 249 NLKLLTDLSLSQNQLRGTVPS-SLSNLSSLEILHLYDNQLSGHIPQEI---GNFMNLNSL 304
L +L+L N + L NL+ L + L + EI L +
Sbjct: 202 QGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDV 261
Query: 305 SVG-----GNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQL 359
++ ++ S+ + + + + + + QL
Sbjct: 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSI--KYLEDVPKHFKWQSLSIIRCQL 319
Query: 360 IGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT--GGIPPEIGN 417
+ D P LK L+ NK G +S P L L ++ N ++ G
Sbjct: 320 KQFPTLDL---PFLKSLTLTMNK--GSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLG 374
Query: 418 ATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE-LGLLTDLGYLDLSA 476
L LD S N + + L L L + L L L YLD+S
Sbjct: 375 TNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISY 433
Query: 477 NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQ-LGKLVQLSELDLSHNLLRGEIPPEI 535
G L L+ L M+ N F L+ LDLS L
Sbjct: 434 TNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF 493
Query: 536 CNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI 582
L L+ LN+SHNNL +++ ++ L ++D S+N ++ +
Sbjct: 494 DTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGIL 540
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 238 bits (608), Expect = 5e-68
Identities = 103/477 (21%), Positives = 174/477 (36%), Gaps = 29/477 (6%)
Query: 122 GKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSL 181
G + I ++ N+ M L+ +P+ SS KN+ L N L S N S L
Sbjct: 2 GSLNPCIEVVPNITYQCMD-QKLS-KVPD-DIPSSTKNIDLSFNPLKILKSYSFSNFSEL 58
Query: 182 VGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241
L L + + L +L L L N ++ P SF L L L +L+
Sbjct: 59 QWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLAS 118
Query: 242 SIPQEIGNLKLLTDLSLSQNQLRG-TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN 300
IG L L L+++ N + +P+ SNL++L + L N + ++
Sbjct: 119 LESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRE 178
Query: 301 LN----SLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKT-LRNCTSLERVRLE 355
SL + N F+ Q L ++ N+ ++ KT L+N L RL
Sbjct: 179 NPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLI 237
Query: 356 KNQLIGNIS------DDFGIYPNLKL--FDLSYNKFYGELSSNWWNCPQLGILKIAGNNI 407
+ + ++ + F L+Y + + + + + +AG +I
Sbjct: 238 LGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSI 297
Query: 408 TGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLT 467
++ + L L +L L L L N+ S I + L
Sbjct: 298 KY--LEDVPKHFKWQSLSIIRCQLKQ---FPTLDLPFLKSLTLTMNKGS--ISFKKVALP 350
Query: 468 DLGYLDLSANRFSKSIPG--NMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHN 525
L YLDLS N S S + L +L++S N + L +L LD H+
Sbjct: 351 SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHS 409
Query: 526 LLRGEIPPE-ICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPS 581
L+ +LE L L++S+ N F + L ++ ++ N S
Sbjct: 410 TLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLS 466
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 2e-55
Identities = 86/435 (19%), Positives = 149/435 (34%), Gaps = 30/435 (6%)
Query: 169 GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRK 228
G + I + ++ + L +P I S+ + L N L+ SF +
Sbjct: 2 GSLNPCIEVVPNIT-YQCMDQKL-SKVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSE 57
Query: 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
L L+LS ++ + L L++L L+ N ++ P S S L+SLE L + +L+
Sbjct: 58 LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLA 117
Query: 289 GHIPQEIGNFMNLNSLSVGGNQFTGF-LPQNICQSGSLQYFSVHDNYFIGSLPKTLRN-- 345
IG + L L+V N LP +L + + NY L+
Sbjct: 118 SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLR 177
Query: 346 --CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSN-WWNCPQLGILKI 402
+ + N I I D L L N + N L + ++
Sbjct: 178 ENPQVNLSLDMSLNP-IDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRL 236
Query: 403 AGNNITGGIPPEIGNAT--------QLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQ 454
EI + + E + + ++ L +++ + L G
Sbjct: 237 ILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVS 296
Query: 455 LSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKL 514
+ ++ L + + + + L L L ++ N+ S I + L
Sbjct: 297 IKY--LEDVPKHFKWQSLSIIRCQLKQFPTLD---LPFLKSLTLTMNKGS--ISFKKVAL 349
Query: 515 VQLSELDLSHNLLR--GEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISY 572
LS LDLS N L G SL L+LS N + NF + L +D +
Sbjct: 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQH 408
Query: 573 NELDGPIPSIEAFRH 587
+ L + AF
Sbjct: 409 STLKR-VTEFSAFLS 422
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 5e-36
Identities = 52/216 (24%), Positives = 81/216 (37%), Gaps = 6/216 (2%)
Query: 78 FPFSLFSHLSYLDLNENQLYGNIPSPIGNL--TKLKFLNLSSNHFSGKIPSEIGLLTNLE 135
F LSYLDL+ N L + +L L+ L+LS N + + L L+
Sbjct: 344 FKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQ 402
Query: 136 VLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG 193
L + L L L L + + L+SL L + NS
Sbjct: 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKD 462
Query: 194 SIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKL 252
+ S++ N +NL +L L K L F L +L L +S+N L L
Sbjct: 463 NTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYS 522
Query: 253 LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
L+ L S N++ + SL +L +N ++
Sbjct: 523 LSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 259 bits (663), Expect = 7e-79
Identities = 98/301 (32%), Positives = 147/301 (48%), Gaps = 42/301 (13%)
Query: 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLH--SFTGETTHQKEFLSEI 738
++ + NNFD F IG G +G VYK L G VA+K+ S G +EF +EI
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGI----EEFETEI 86
Query: 739 KALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL--SSETATEMDWSKRVNVIK 796
+ L+ RH ++V GFC L+Y+Y+E G+L R L S M W +R+ +
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL-LKPDSSNWS-ELAG 854
G A L Y+H I+HRDV S N+LLD + ++DFG +K + D ++ S + G
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKG 203
Query: 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA--- 911
T GY+ PE ++TEK DVYSFGV+ EV+ + SLP +N A
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA-------IVQSLPREMVNLAEWA 256
Query: 912 --------IDHMFDARL---PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM-QIVCK 959
++ + D L P + L+ + A+ C+ + E RP+M ++ K
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRP-------ESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309
Query: 960 L 960
L
Sbjct: 310 L 310
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 3e-75
Identities = 93/299 (31%), Positives = 145/299 (48%), Gaps = 28/299 (9%)
Query: 681 YEEIIRSINNFDESFC------IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQ--K 732
+ E+ NNFDE +G GG+G VYK + TVAVKKL + TT + +
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQ 75
Query: 733 EFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATE-MDWSKR 791
+F EIK + +H N+V+ GF S LVY Y+ GSL LS T + W R
Sbjct: 76 QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 135
Query: 792 VNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL-KPDSSNWS 850
+ +G A+ ++++H +HRD+ S N+LLD + A +SDFG A+ K + +
Sbjct: 136 CKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT 192
Query: 851 E-LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL-----P 904
+ GT Y+APE A ++T K D+YSFGV+ LE+I G D L
Sbjct: 193 SRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLLLDIKEE 249
Query: 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963
+ + I+ D + + ++++ VA C+ +RP+++ V +LL
Sbjct: 250 IEDEEKTIEDYIDKK-----MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 238 bits (610), Expect = 9e-70
Identities = 101/503 (20%), Positives = 180/503 (35%), Gaps = 59/503 (11%)
Query: 78 FPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVL 137
F + + L + + +L ++ L + L NL +
Sbjct: 18 FTDTALAEKMKTVLGKTNVTD--TVSQTDLDQVTTLQADRLGIK--SIDGVEYLNNLTQI 73
Query: 138 HMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPS 197
+ N L I + +L+ L ++ ++ N + P + NL++L GL L+NN + +
Sbjct: 74 NFSNNQLT-DITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI--TDID 128
Query: 198 SIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLS 257
+ NL+NL L L N + S+ L L +L N + + NL L L
Sbjct: 129 PLKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFGNQVTD---LKPLANLTTLERLD 183
Query: 258 LSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQ 317
+S N++ + S L+ L++LE L +NQ+S P +G NL+ LS+ GNQ
Sbjct: 184 ISSNKV--SDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD---- 235
Query: 318 NICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFD 377
TL + T+L + L NQ+ L
Sbjct: 236 ----------------------IGTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELK 271
Query: 378 LSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPL 437
L N+ S L L++ N + I N L L N++ P+
Sbjct: 272 LGANQISN--ISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPV 327
Query: 438 ELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLN 497
+LT L L N++S L LT++ +L N+ S P + L ++ L
Sbjct: 328 S--SLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLG 381
Query: 498 MSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPT 557
++ ++ + + + L P I + S + +++ N S
Sbjct: 382 LNDQAWTNAPVNYKANVSIPNTVKNVTGAL--IAPATISDGGSYTEPDITWNLPS-YTNE 438
Query: 558 NFENMHGLLSIDISYNELDGPIP 580
++I G +
Sbjct: 439 VSYTFSQPVTIGKGTTTFSGTVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 215 bits (550), Expect = 2e-61
Identities = 110/494 (22%), Positives = 175/494 (35%), Gaps = 81/494 (16%)
Query: 86 LSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLN 145
L + ++ I L + L + + + L + L +
Sbjct: 3 LGSATITQDTPINQI-FTDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK 59
Query: 146 GSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL 205
SI + +L++L + N L P + NL+ LV + + NN + + + + NL+NL
Sbjct: 60 -SIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQI--ADITPLANLTNL 114
Query: 206 VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG 265
L L N + P L L +LELS+N +S + L L LS
Sbjct: 115 TGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQV--- 167
Query: 266 TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSL 325
T L+NL++LE L + N++S + NL SL NQ + P
Sbjct: 168 TDLKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--------- 216
Query: 326 QYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYG 385
L T+L+ + L NQL
Sbjct: 217 -----------------LGILTNLDELSLNGNQLKDI----------------------- 236
Query: 386 ELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSL 445
+ L L +A N I+ + T+L EL +N + PL LT+L
Sbjct: 237 ---GTLASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISNISPLA--GLTAL 289
Query: 446 NDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ 505
+L LN NQL + L +L YL L N S P + L KL L +N+ S
Sbjct: 290 TNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345
Query: 506 EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGL 565
L L ++ L HN + P + NL + +L L+ + + N+
Sbjct: 346 --VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIP 401
Query: 566 LSIDISYNELDGPI 579
++ L P
Sbjct: 402 NTVKNVTGALIAPA 415
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 8e-43
Identities = 79/314 (25%), Positives = 129/314 (41%), Gaps = 24/314 (7%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
D P + + L LD++ N++ + S + LT L+ L ++N S P +G+LTNL
Sbjct: 168 TDLKPLANLTTLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITP--LGILTNL 223
Query: 135 EVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
+ L + N L I + L++L +L L N + P + L+ L L L N +
Sbjct: 224 DELSLNGNQLK-DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI 280
Query: 195 IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLT 254
P + L+ L L L +N L P L+ LT L L N +S P + +L L
Sbjct: 281 SP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334
Query: 255 DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314
L N++ + SSL+NL+++ L NQ+S P + N + L + +T
Sbjct: 335 RLFFYNNKV--SDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN- 389
Query: 315 LPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQL--IGNISDDFGIYPN 372
P N + S+ +V + P T+ + S + N +S F
Sbjct: 390 APVNYKANVSIPN-TVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFS---Q 445
Query: 373 LKLFDLSYNKFYGE 386
F G
Sbjct: 446 PVTIGKGTTTFSGT 459
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 2e-35
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 14/241 (5%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
+ ++L+ LDL NQ+ +P+ LTKL L L +N S S + LT L L
Sbjct: 238 TLASLTNLTDLDLANNQISN--LAPLSGLTKLTELKLGANQISN--ISPLAGLTALTNLE 293
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS 198
+ N L I I +L +L L L N++ P + +L+ L L+ YNN + S SS
Sbjct: 294 LNENQLE-DISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKV--SDVSS 348
Query: 199 IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSL 258
+ NL+N+ +L N + P L ++T+L L++ + + N+ + +
Sbjct: 349 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKN 406
Query: 259 SQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQN 318
L P+++S+ S + N S + F ++ G F+G + Q
Sbjct: 407 VTGAL--IAPATISDGGSYTEPDITWNLPSY-TNEVSYTFSQPVTIGKGTTTFSGTVTQP 463
Query: 319 I 319
+
Sbjct: 464 L 464
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 230 bits (589), Expect = 1e-68
Identities = 70/311 (22%), Positives = 128/311 (41%), Gaps = 41/311 (13%)
Query: 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKA 740
E + RG +G V+KA+L + VAVK + + E+ +
Sbjct: 16 TENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPI---QDKQSWQNEYEVYS 71
Query: 741 LTGVRHRNIVKFYGFCSHARHS----FLVYEYLERGSLARILSSETATEMDWSKRVNVIK 796
L G++H NI++F G +L+ + E+GSL+ L + + W++ ++ +
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCHIAE 128
Query: 797 GVAHALSYMHHE-------CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849
+A L+Y+H + +P I HRD+ SKNVLL A ++DFG A + S
Sbjct: 129 TMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAG 188
Query: 850 S--ELAGTYGYVAPELA-----YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS 902
GT Y+APE+ + + D+Y+ G++ E+ D + +
Sbjct: 189 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD--GPVDEYM 246
Query: 903 LPGANM---NEAIDHMFDA--------RLPPPWLEVGVEDKLKSIIEVALSCVDANPERR 951
LP + +++ M + L W + + + E C D + E R
Sbjct: 247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQK---HAGMAMLCETIEECWDHDAEAR 303
Query: 952 PNMQIVCKLLS 962
+ V + ++
Sbjct: 304 LSAGCVGERIT 314
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 234 bits (600), Expect = 3e-67
Identities = 114/535 (21%), Positives = 187/535 (34%), Gaps = 35/535 (6%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
+ P +L LDL+ N L + +L+ L+LS L++L
Sbjct: 19 FYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL 78
Query: 135 EVLHMFVNHLNGSIPEI-GHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLP- 192
L + N + LSSL+ L +L IG+L +L L + +N +
Sbjct: 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138
Query: 193 GSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT----KLELSNNQLSGSIPQEIG 248
+P NL+NL +L L N ++ + L ++ L+LS N ++ I
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAF 197
Query: 249 NLKLLTDLSLSQNQLRGTVPS-SLSNLSSLEILHLYDNQLSGHIPQE---IGNFMNLNSL 304
L L+L N V + L+ LE+ L + E L +L
Sbjct: 198 KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257
Query: 305 SVGGNQFTGF------LPQNICQSGSLQYFSVHDNYFIGSLPKT-LRNCTSLERVRLEKN 357
++ + + ++ FS+ + LE V +
Sbjct: 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFG 317
Query: 358 QLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT--GGIPPEI 415
Q +LK + NK S + P L L ++ N ++ G
Sbjct: 318 QF------PTLKLKSLKRLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLSFKGCCSQSD 369
Query: 416 GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE--LGLLTDLGYLD 473
T L LD S N ++ + L L L + L + L +L YLD
Sbjct: 370 FGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ-MSEFSVFLSLRNLIYLD 427
Query: 474 LSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQ-LGKLVQLSELDLSHNLLRGEIP 532
+S + G L L L M+ N F + +L L+ LDLS L ++
Sbjct: 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLS 486
Query: 533 PEI-CNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFR 586
P +L SL+ LN++ N L F+ + L I + N D P I+
Sbjct: 487 PTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLS 541
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 2e-21
Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 4/174 (2%)
Query: 74 TLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLT 132
+ L YLDL+ N + + S L +L+ L+ ++ + L
Sbjct: 363 GCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 421
Query: 133 NLEVLHMFVNHLNGSIPEI-GHLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNS 190
NL L + H + I LSSL+ L + GN I L +L L L
Sbjct: 422 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 481
Query: 191 LPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244
L P++ +LS+L L + N L+ F L L K+ L N S P
Sbjct: 482 LEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 4e-07
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 65 NLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124
+ S + F+ +L++LDL++ QL P+ +L+ L+ LN++SN
Sbjct: 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510
Query: 125 PSEIGLLTNLEVLHMFVNHLNGSIPEIGHLS 155
LT+L+ + + N + S P I +LS
Sbjct: 511 DGIFDRLTSLQKIWLHTNPWDCSCPRIDYLS 541
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 221 bits (565), Expect = 1e-62
Identities = 105/512 (20%), Positives = 186/512 (36%), Gaps = 28/512 (5%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTN 133
P L + + LDL+ N++ + L+ L L S+ + I + L +
Sbjct: 17 FTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN-TIEGDAFYSLGS 75
Query: 134 LEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDG-PIPVSIGNLSSLVGLYLYNNS 190
LE L + NHL+ S+ G LSSLK L L GN + NL++L L + N
Sbjct: 76 LEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134
Query: 191 LPGSIP-SSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGN 249
I L++L L +K LR S +R + L L ++ + +
Sbjct: 135 TFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADI 194
Query: 250 LKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGN 309
L + L L L S L + + S + + L + +
Sbjct: 195 LSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELS 254
Query: 310 QFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGI 369
+ + + C L F+ ++ + L K ++ R+ + + L ++S + +
Sbjct: 255 E----VEFDDCTLNGLGDFNPSESDVVSELGK--VETVTIRRLHIPQFYLFYDLSTVYSL 308
Query: 370 YPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPE---IGNATQLHELDF 426
+K + +K + S + L L ++ N + G L L
Sbjct: 309 LEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVL 368
Query: 427 SSNHL--VGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIP 484
S NHL + K L L +L L ++ N +P + +L+LS+ +
Sbjct: 369 SQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIR-VVK 426
Query: 485 GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKL 544
L L++S+N + L +L EL +S N L+ +P L +
Sbjct: 427 --TCIPQTLEVLDVSNNNLD-SFSLFL---PRLQELYISRNKLK-TLPDAS-LFPVLLVM 478
Query: 545 NLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576
+S N L F+ + L I + N D
Sbjct: 479 KISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 1e-40
Identities = 69/406 (16%), Positives = 125/406 (30%), Gaps = 16/406 (3%)
Query: 177 NLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSN 236
+ + + S SIPS + + + L L N + L L L +
Sbjct: 3 SCDASGVCDGRSRSFT-SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKS 59
Query: 237 NQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG-HIPQEI 295
++++ +L L L LS N L S LSSL+ L+L N +
Sbjct: 60 SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLF 119
Query: 296 GNFMNLNSLSVGG-NQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRL 354
N NL +L +G F+ + SL + ++L++ + + L
Sbjct: 120 PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179
Query: 355 EKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPE 414
++ + I +++ +L S +K +
Sbjct: 180 HLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239
Query: 415 IGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDL 474
+L + +E + T N ++ + L +
Sbjct: 240 FNELLKLLRYILELSE------VEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHI 293
Query: 475 SANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPE 534
+ L K+ + + +++ L L LDLS NL+ E
Sbjct: 294 PQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKN 353
Query: 535 ---ICNLESLEKLNLSHNNLS--GSIPTNFENMHGLLSIDISYNEL 575
SL+ L LS N+L + L S+DIS N
Sbjct: 354 SACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF 399
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 4e-36
Identities = 59/422 (13%), Positives = 135/422 (31%), Gaps = 44/422 (10%)
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
++ + + + + F+ + L+ L++ L + ++ + L L + +
Sbjct: 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF 186
Query: 123 KIPSEIGLLTNLEVLHMFVNHLNG-SIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSL 181
+ +L+++ L + +L + + S L L
Sbjct: 187 LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKL 246
Query: 182 VGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241
+ L + + + + + + +L + L
Sbjct: 247 LRYILELSEV------EFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFY 300
Query: 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNL 301
+ L+ + +++ +++ S +L SLE L L +N +
Sbjct: 301 DLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMV------------- 347
Query: 302 NSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYF--IGSLPKTLRNCTSLERVRLEKNQL 359
+ + G P SLQ + N+ + + L +L + + +N
Sbjct: 348 -EEYLKNSACKGAWP-------SLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNT- 398
Query: 360 IGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQ-LGILKIAGNNITGGIPPEIGNA 418
+ D ++ +LS + PQ L +L ++ NN+
Sbjct: 399 FHPMPDSCQWPEKMRFLNLSSTG----IRVVKTCIPQTLEVLDVSNNNLD-SFSL---FL 450
Query: 419 TQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE-LGLLTDLGYLDLSAN 477
+L EL S N L +P + + L + ++ NQL +P LT L + L N
Sbjct: 451 PRLQELYISRNKLK-TLP-DASLFPVLLVMKISRNQLK-SVPDGIFDRLTSLQKIWLHTN 507
Query: 478 RF 479
+
Sbjct: 508 PW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 2e-28
Identities = 53/259 (20%), Positives = 103/259 (39%), Gaps = 18/259 (6%)
Query: 60 RIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNH 119
+ + + S + + + L + + L+ ++ + L K+K + + ++
Sbjct: 262 TLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSK 321
Query: 120 FSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE----IGHLSSLKNLALDGNHLD--GPIPV 173
S L +LE L + N + + G SL+ L L NHL
Sbjct: 322 VFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGE 381
Query: 174 SIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLE 233
+ L +L L + N+ +P S + +L L +R + + + L L+
Sbjct: 382 ILLTLKNLTSLDISRNTF-HPMPDSCQWPEKMRFLNLSSTGIRV-VKT--CIPQTLEVLD 437
Query: 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQ 293
+SNN L S L L +L +S+N+L+ T+P + S L ++ + NQL +P
Sbjct: 438 VSNNNLD-SFSL---FLPRLQELYISRNKLK-TLPDA-SLFPVLLVMKISRNQLK-SVPD 490
Query: 294 EI-GNFMNLNSLSVGGNQF 311
I +L + + N +
Sbjct: 491 GIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 6e-28
Identities = 62/344 (18%), Positives = 114/344 (33%), Gaps = 36/344 (10%)
Query: 74 TLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFS-------GKIPS 126
L + + S + YL+L + L SP+ + + S ++
Sbjct: 186 FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLK 245
Query: 127 EIGLLTNLEVLHMFVNHLNG----------SIPEIG--HLSSLKNLALDGNHLDGPIPVS 174
+ + L + LNG + E+G +++ L + +L +
Sbjct: 246 LLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV 305
Query: 175 IGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKN---HLRGPIPSSFGYLRKLTK 231
L + + + N+ + S +L +L +L L +N + G L
Sbjct: 306 YSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQT 365
Query: 232 LELSNNQLSGSIPQEIG---NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
L LS N L S+ + LK LT L +S+N +P S + L+L +
Sbjct: 366 LVLSQNHLR-SMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR 423
Query: 289 GHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTS 348
+ I L L V N + LQ + N + +LP
Sbjct: 424 -VVKTCI--PQTLEVLDVSNNNLD-SFSLFL---PRLQELYISRN-KLKTLPDAS-LFPV 474
Query: 349 LERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW 392
L +++ +NQL F +L+ L N + +
Sbjct: 475 LLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 518
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 209 bits (533), Expect = 6e-61
Identities = 73/267 (27%), Positives = 129/267 (48%), Gaps = 26/267 (9%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+GRG +G V KA+ VA+K++ S + +K F+ E++ L+ V H NIVK YG C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 757 SHARHSFLVYEYLERGSLARIL-SSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+ LV EY E GSL +L +E + ++ + ++Y+H ++H
Sbjct: 71 LNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 816 RDVSSKNVLLDFEYE-AHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCD 874
RD+ N+LL + DFGTA ++ +N G+ ++APE+ +EKCD
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAPEVFEGSNYSEKCD 185
Query: 875 VYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLK 934
V+S+G++ EVI + P D + + + + R P + ++
Sbjct: 186 VFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT--------RPPLI---KNLPKPIE 234
Query: 935 SIIEVALSCVDANPERRPNMQIVCKLL 961
S++ C +P +RP+M+ + K++
Sbjct: 235 SLMT---RCWSKDPSQRPSMEEIVKIM 258
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 5e-60
Identities = 89/266 (33%), Positives = 135/266 (50%), Gaps = 19/266 (7%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG G +G+V++AE G VAVK L EFL E+ + +RH NIV F G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 757 SHARHSFLVYEYLERGSLARIL-SSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+ + +V EYL RGSL R+L S ++D +R+++ VA ++Y+H+ PPIVH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVH 162
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDV 875
R++ S N+L+D +Y V DFG ++L + AGT ++APE+ EK DV
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDV 222
Query: 876 YSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKS 935
YSFGV+ E+ Q P +L+ + + A + RL P + ++ +
Sbjct: 223 YSFGVILWELATLQQP---WGNLNPAQVVAAVGFK------CKRLEIP---RNLNPQVAA 270
Query: 936 IIEVALSCVDANPERRPNM-QIVCKL 960
IIE C P +RP+ I+ L
Sbjct: 271 IIE---GCWTNEPWKRPSFATIMDLL 293
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 1e-58
Identities = 83/371 (22%), Positives = 152/371 (40%), Gaps = 26/371 (7%)
Query: 86 LSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLN 145
+ L + I P +L + L + + L ++ L + +
Sbjct: 2 AATLATLPAPI-NQI-FPDADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA 57
Query: 146 GSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL 205
SI I +L++L+ L L+GN + P + NL L LY+ N + + S++ NL+NL
Sbjct: 58 -SIQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKI--TDISALQNLTNL 112
Query: 206 VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG 265
L+L ++++ P L K+ L L N S + N+ L L++++++++
Sbjct: 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNL-SDLSPLSNMTGLNYLTVTESKVKD 169
Query: 266 TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSL 325
+ ++NL+ L L L NQ+ P + + +L+ + NQ T + L
Sbjct: 170 --VTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDI--TPVANMTRL 223
Query: 326 QYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYG 385
+ +N P L N + L + + NQ I +I+ LK+ ++ N+
Sbjct: 224 NSLKIGNNKITDLSP--LANLSQLTWLEIGTNQ-ISDIN-AVKDLTKLKMLNVGSNQISD 279
Query: 386 ELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSL 445
S N QL L + N + IG T L L S NH+ P LA+L+ +
Sbjct: 280 --ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKM 335
Query: 446 NDLILNGNQLS 456
+ +
Sbjct: 336 DSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 2e-56
Identities = 86/396 (21%), Positives = 161/396 (40%), Gaps = 51/396 (12%)
Query: 157 LKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLR 216
LA ++ P + +L+ + L S+ + L ++ L + +
Sbjct: 2 AATLATLPAPINQIFPDA--DLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA 57
Query: 217 GPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSS 276
YL L L L+ NQ++ P + NL LT+L + N++ T S+L NL++
Sbjct: 58 SI--QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKI--TDISALQNLTN 111
Query: 277 LEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFI 336
L L+L ++ +S P + N + SL++G N
Sbjct: 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNL------------------------ 145
Query: 337 GSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQ 396
S L N T L + + +++ + +++ +L L+YN+ S +
Sbjct: 146 -SDLSPLSNMTGLNYLTVTESK-VKDVTP-IANLTDLYSLSLNYNQIED--ISPLASLTS 200
Query: 397 LGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS 456
L N IT P + N T+L+ L +N + PL NL+ L L + NQ+S
Sbjct: 201 LHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLA--NLSQLTWLEIGTNQIS 256
Query: 457 GGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQ 516
+ LT L L++ +N+ S + L +L+ L +++N+ E +G L
Sbjct: 257 D--INAVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312
Query: 517 LSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552
L+ L LS N + P + +L ++ + ++ +
Sbjct: 313 LTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 9e-52
Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 20/304 (6%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
++L YL+LN NQ+ SP+ NL KL L + +N + S + LTNL L+
Sbjct: 61 GIEYLTNLEYLNLNGNQITD--ISPLSNLVKLTNLYIGTNKIT--DISALQNLTNLRELY 116
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS 198
+ ++++ I + +L+ + +L L NH + + N++ L L + + + P
Sbjct: 117 LNEDNIS-DISPLANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP-- 172
Query: 199 IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSL 258
I NL++L L L N + P L L NQ++ P + N+ L L +
Sbjct: 173 IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKI 228
Query: 259 SQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQN 318
N++ T S L+NLS L L + NQ+S + + L L+VG NQ +
Sbjct: 229 GNNKI--TDLSPLANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISDI--SV 282
Query: 319 ICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDL 378
+ L +++N + + T+L + L +N + + D
Sbjct: 283 LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADF 340
Query: 379 SYNK 382
+
Sbjct: 341 ANQV 344
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 8e-49
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 18/281 (6%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
P S L+ L + N++ S + NLT L+ L L+ ++ S S + LT + L+
Sbjct: 83 PLSNLVKLTNLYIGTNKI--TDISALQNLTNLRELYLNEDNISD--ISPLANLTKMYSLN 138
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS 198
+ NH + + +++ L L + + + P I NL+ L L L N + P
Sbjct: 139 LGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-- 194
Query: 199 IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSL 258
+ +L++L Y N + P + +L L++ NN+++ P + NL LT L +
Sbjct: 195 LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEI 250
Query: 259 SQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQN 318
NQ+ + +++ +L+ L++L++ NQ+S + N LNSL + NQ +
Sbjct: 251 GTNQI--SDINAVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEV 306
Query: 319 ICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQL 359
I +L + N+ P L + + ++ +
Sbjct: 307 IGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 8e-48
Identities = 79/400 (19%), Positives = 141/400 (35%), Gaps = 73/400 (18%)
Query: 181 LVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240
L + P +L+ + L+K + + L +TKL ++ +++
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA 57
Query: 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN 300
SI I L L L+L+ NQ+ T S LSNL L L++ N+++ + N N
Sbjct: 58 -SIQ-GIEYLTNLEYLNLNGNQI--TDISPLSNLVKLTNLYIGTNKIT--DISALQNLTN 111
Query: 301 LNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLI 360
L L + + + P L N T + + L N +
Sbjct: 112 LRELYLNEDNISDISP--------------------------LANLTKMYSLNLGANHNL 145
Query: 361 GNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQ 420
++S L ++ +K + N L L + N I P + + T
Sbjct: 146 SDLSP-LSNMTGLNYLTVTESKVKD--VTPIANLTDLYSLSLNYNQIEDISP--LASLTS 200
Query: 421 LHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS 480
LH N + P+ N+T LN L + N+++ L L+ L +L++ N+ S
Sbjct: 201 LHYFTAYVNQITDITPVA--NMTRLNSLKIGNNKITD--LSPLANLSQLTWLEIGTNQIS 256
Query: 481 KSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLES 540
I + L +L L++ N + + NL
Sbjct: 257 -DINA-------------------------VKDLTKLKMLNVGSNQISD--ISVLNNLSQ 288
Query: 541 LEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580
L L L++N L + L ++ +S N + P
Sbjct: 289 LNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
P + + L Y NQ+ +P+ N+T+L L + +N + P + L+ L L
Sbjct: 194 PLASLTSLHYFTAYVNQITD--ITPVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLE 249
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS 198
+ N ++ I + L+ LK L + N + + NLS L L+L NN L
Sbjct: 250 IGTNQIS-DINAVKDLTKLKMLNVGSNQISDISV--LNNLSQLNSLFLNNNQLGNEDMEV 306
Query: 199 IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240
IG L+NL LFL +NH+ P L K+ + +N +
Sbjct: 307 IGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 2e-58
Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 32/275 (11%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGE--TTHQKEFLSEIKALTGVRHRNIVKFYG 754
IG GG+G VY+A GD VAVK E + + E K ++H NI+ G
Sbjct: 15 IGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
C + LV E+ G L R+LS + + VN +A ++Y+H E PI+
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 815 HRDVSSKNVLLDFEYEAH--------VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT 866
HRD+ S N+L+ + E ++DFG A+ + AG Y ++APE+
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAYAWMAPEVIRA 188
Query: 867 MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926
++ DV+S+GVL E++ G+ P + L+ + N LP P
Sbjct: 189 SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN---------KLALPIP--- 236
Query: 927 VGVEDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
+ ++E C + +P RP+ I+ +L
Sbjct: 237 STCPEPFAKLME---DCWNPDPHSRPSFTNILDQL 268
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 199 bits (508), Expect = 1e-57
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 33/278 (11%)
Query: 697 IGRGGYGSVYKAELPS-GDTVAVKKLH--SFTGETTHQ---KEFLSEIKALTGVRHRNIV 750
IG+GG+G V+K L VA+K L GET +EF E+ ++ + H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
K YG + +V E++ G L L + + WS ++ ++ +A + YM +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN-QN 142
Query: 811 PPIVHRDVSSKNVLLD-----FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL-- 863
PPIVHRD+ S N+ L A V+DFG ++ S L G + ++APE
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG---LLGNFQWMAPETIG 199
Query: 864 AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
A TEK D YSF ++ ++ G+ P D S + R P
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE-------GLRPTIP 252
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+L+++IE C +P++RP+ + K L
Sbjct: 253 ---EDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 1e-57
Identities = 77/321 (23%), Positives = 122/321 (38%), Gaps = 50/321 (15%)
Query: 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSE--I 738
E ++N IGRG YG+VYK L VAVK +++ F++E I
Sbjct: 5 ASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSF-----ANRQNFINEKNI 58
Query: 739 KALTGVRHRNIVKFYGFCSHARHS-----FLVYEYLERGSLARILSSETATEMDWSKRVN 793
+ + H NI +F LV EY GSL + LS T DW
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCR 115
Query: 794 VIKGVAHALSYMHHE------CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847
+ V L+Y+H E +P I HRD++S+NVL+ + +SDFG + L +
Sbjct: 116 LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175
Query: 848 NWSE--------LAGTYGYVAPE-------LAYTMKVTEKCDVYSFGVLALEVIKGQHPK 892
GT Y+APE L ++ D+Y+ G++ E+
Sbjct: 176 VRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235
Query: 893 DLLSSLSDSSLPGANM---NEAIDHMFDA--------RLPPPWLEVGVEDKLKSIIEVAL 941
S+ + + + + M + P W E ++S+ E
Sbjct: 236 FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKE--NSLAVRSLKETIE 293
Query: 942 SCVDANPERRPNMQIVCKLLS 962
C D + E R Q + ++
Sbjct: 294 DCWDQDAEARLTAQXAEERMA 314
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 1e-55
Identities = 58/270 (21%), Positives = 105/270 (38%), Gaps = 28/270 (10%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+ G ++K G+ + VK L T ++F E L H N++ G C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 757 SH--ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
A H L+ ++ GSL +L T +D S+ V +A ++++H P I
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIP 135
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL---AYTMKVTE 871
++S++V++D + A +S + +VAPE
Sbjct: 136 RHALNSRSVMIDEDMTARISMADVKFSFQSPGR-----MYAPAWVAPEALQKKPEDTNRR 190
Query: 872 KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931
D++SF VL E++ + P + LS+ + E R P G+
Sbjct: 191 SADMWSFAVLLWELVTREVP---FADLSNMEIGMKVALE------GLRPTIP---PGISP 238
Query: 932 KLKSIIEVALSCVDANPERRPNM-QIVCKL 960
+ +++ C++ +P +RP IV L
Sbjct: 239 HVSKLMK---ICMNEDPAKRPKFDMIVPIL 265
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 3e-55
Identities = 113/542 (20%), Positives = 204/542 (37%), Gaps = 46/542 (8%)
Query: 54 SCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFL 113
SC+ GRI + L Q P + + L L+ N + S L +L+ L
Sbjct: 1 SCSFDGRIAFYRFCN------LTQVP-QVLNTTERLLLSFNYIRTVTASSFPFLEQLQLL 53
Query: 114 NLSSNHFSGKIPSEI-GLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGP 170
L S + I E L NL +L + + + + L L L L L
Sbjct: 54 ELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY-FLHPDAFQGLFHLFELRLYFCGLSDA 112
Query: 171 I--PVSIGNLSSLVGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLR 227
+ NL +L L L N + + S G L++L + N + L+
Sbjct: 113 VLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172
Query: 228 --KLTKLELSNNQLSGSIPQEIGN-LKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYD 284
L+ L+ N L + + G + ++ L + G N +++I +
Sbjct: 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSG-------NGWTVDITGNFS 225
Query: 285 NQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLP---QNICQSGSLQYFSVHDNYFIGSLPK 341
N +S + ++ G + + +S S+++ + + +
Sbjct: 226 NAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARS-SVRHLDLSHGFVFSLNSR 284
Query: 342 TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILK 401
L+ + L N++ + F NL++ +LSYN SSN++ P++ +
Sbjct: 285 VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYID 344
Query: 402 IAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIP 460
+ N+I I + +L LD N L + + S+ D+ L+GN+L +P
Sbjct: 345 LQKNHIAI-IQDQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKLVT-LP 397
Query: 461 PELGLLTDLGYLDLSANRFSK-SIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLVQLS 518
+ + LS NR I + + L L ++ N FS Q + L
Sbjct: 398 K---INLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLE 454
Query: 519 ELDLSHNLLRGEIPPEIC-----NLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573
+L L N+L+ E+C L L+ L L+HN L+ P F ++ L + ++ N
Sbjct: 455 QLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSN 514
Query: 574 EL 575
L
Sbjct: 515 RL 516
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 1e-46
Identities = 96/464 (20%), Positives = 165/464 (35%), Gaps = 41/464 (8%)
Query: 147 SIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSI-PSSIGNLSNL 205
+P+ L++ + L L N++ S L L L L + P +I + NL NL
Sbjct: 18 QVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNL 75
Query: 206 VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQE--IGNLKLLTDLSLSQNQL 263
L L + + P +F L L +L L LS ++ ++ NLK LT L LS+NQ+
Sbjct: 76 RILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQI 135
Query: 264 RG-TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF--MNLNSLSVGGNQFTGFLPQNIC 320
R + S L+SL+ + NQ+ E+ L+ S+ N + +
Sbjct: 136 RSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWG 195
Query: 321 QSG------SLQYFSVHDNYFIGSLPKTLRNCTS------------LERVRLEKNQLIGN 362
+ L+ V N + + N S + + +
Sbjct: 196 KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDP 255
Query: 363 ISDDFG--IYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI-GNAT 419
+ F +++ DLS+ + S + L +L +A N I I E
Sbjct: 256 DQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINK-IADEAFYGLD 314
Query: 420 QLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRF 479
L L+ S N L L + + L N ++ L L LDL N
Sbjct: 315 NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374
Query: 480 SKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG-EIPPEICNL 538
+ + ++ + + +S N+ I L + + LS N L +I + +
Sbjct: 375 T-----TIHFIPSIPDIFLSGNKLVTLPKINL----TANLIHLSENRLENLDILYFLLRV 425
Query: 539 ESLEKLNLSHNNLSG-SIPTNFENMHGLLSIDISYNELDGPIPS 581
L+ L L+ N S S L + + N L +
Sbjct: 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWET 469
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 2e-33
Identities = 95/516 (18%), Positives = 171/516 (33%), Gaps = 96/516 (18%)
Query: 85 HLSYLDLNENQLYGNIPSPIGNLTK------LKFLNLSSNHFSGKIPS------------ 126
LS+ L N LY + G L+ L++S N ++ I
Sbjct: 175 TLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAF 234
Query: 127 EIGLLTNLEVLHMFVN---HLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVG 183
+ L ++ + + + SS+++L L + L L
Sbjct: 235 SLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKV 294
Query: 184 LYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243
L L N + + L NL L L N L S+F L K+ ++L N ++
Sbjct: 295 LNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQ 354
Query: 244 PQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNS 303
Q L+ L L L N L +++ + S+ + L N+L +P+ + N
Sbjct: 355 DQTFKFLEKLQTLDLRDNAL-----TTIHFIPSIPDIFLSGNKLV-TLPK---INLTANL 405
Query: 304 LSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNI 363
+ + N+ ++ YF+ +
Sbjct: 406 IHLSENRLE----------------NLDILYFLLRV------------------------ 425
Query: 364 SDDFGIYPNLKLFDLSYNKF-YGELSSNWWNCPQLGILKIAGNNITGGIPPEI-----GN 417
P+L++ L+ N+F P L L + N + E+
Sbjct: 426 -------PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEG 478
Query: 418 ATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSAN 477
+ L L + N+L P ++LT+L L LN N+L+ + L +L LD+S N
Sbjct: 479 LSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-VLSHND-LPANLEILDISRN 536
Query: 478 RFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICN 537
+ P + L L+++ N+F E +LS N I +
Sbjct: 537 QLLAPNP---DVFVSLSVLDITHNKFICEC--------ELSTFINWLNHTNVTIAGPPAD 585
Query: 538 LESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573
+ + + S +L + L S+ S
Sbjct: 586 IYCVYPDSFSGVSLFSLSTEGCDEEEVLKSLKFSLF 621
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 4e-25
Identities = 69/292 (23%), Positives = 116/292 (39%), Gaps = 26/292 (8%)
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
+NL+ L L F ++Y+DL +N + L KL+ L+L N
Sbjct: 318 VLNLSYNLLG-ELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL-- 374
Query: 123 KIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDG-PIPVSIGNLSSL 181
+ I + ++ + + N L ++P+I + + L N L+ I + + L
Sbjct: 375 ---TTIHFIPSIPDIFLSGNKLV-TLPKIN--LTANLIHLSENRLENLDILYFLLRVPHL 428
Query: 182 VGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKNHLRGPIPSS-----FGYLRKLTKLELS 235
L L N S + +L LFL +N L+ + F L L L L+
Sbjct: 429 QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLN 488
Query: 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI 295
+N L+ P +L L LSL+ N+L + L ++LEIL + NQL P
Sbjct: 489 HNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDL--PANLEILDISRNQLLAPNPD-- 544
Query: 296 GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCT 347
F++L+ L + N+F C+ + + H N I P +
Sbjct: 545 -VFVSLSVLDITHNKF-----ICECELSTFINWLNHTNVTIAGPPADIYCVY 590
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 3e-06
Identities = 32/118 (27%), Positives = 45/118 (38%), Gaps = 8/118 (6%)
Query: 55 CNHAGRIISINLTSTSLKG----TLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKL 110
+ + + L L+ L F SHL L LN N L P +LT L
Sbjct: 447 PSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTAL 506
Query: 111 KFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLD 168
+ L+L+SN + + L NLE+L + N L P SL L + N
Sbjct: 507 RGLSLNSNRLT-VLSHND-LPANLEILDISRNQL--LAPNPDVFVSLSVLDITHNKFI 560
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 4e-55
Identities = 100/496 (20%), Positives = 166/496 (33%), Gaps = 80/496 (16%)
Query: 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNH 143
+ L + + L +P N+ + + + P G + V +
Sbjct: 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCL 69
Query: 144 LNG------------SIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSL 191
S+PE+ L++L N L +P +L SL+ +L
Sbjct: 70 DRQAHELELNNLGLSSLPEL--PPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKAL 126
Query: 192 PGSIPS---------------SIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSN 236
P + N S L + + N L+ +P L + N
Sbjct: 127 SDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKK-LPDL---PPSLEFIAAGN 182
Query: 237 NQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIG 296
NQL +P E+ NL LT + N L+ +P +L E + +N L +P E+
Sbjct: 183 NQLE-ELP-ELQNLPFLTAIYADNNSLK-KLPDLPLSL---ESIVAGNNILE-ELP-ELQ 234
Query: 297 NFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEK 356
N L ++ N LP SL+ +V DNY + LP+ ++ T L+
Sbjct: 235 NLPFLTTIYADNNLLKT-LPDLP---PSLEALNVRDNY-LTDLPELPQSLTFLDVSENIF 289
Query: 357 NQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIG 416
+ L PNL + S N+ L P L L ++ N + +P
Sbjct: 290 SGLSELP-------PNLYYLNASSNEI-RSLCDLP---PSLEELNVSNNKLIE-LPALPP 337
Query: 417 NATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSA 476
L L S NHL +VP NL L+ + N L P + DL
Sbjct: 338 R---LERLIASFNHLA-EVPELPQNLKQLH---VEYNPLRE-FPDIPESVEDL-----RM 384
Query: 477 NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEIC 536
N +P L L++ +N E P + +L ++ +
Sbjct: 385 NSHLAEVPELPQ---NLKQLHVETNPLR-EFPDIPE---SVEDLRMNSERVVDPYEFAHE 437
Query: 537 NLESLEKLNLSHNNLS 552
+ LE H++
Sbjct: 438 TTDKLEDDVFEHHHHH 453
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 3e-48
Identities = 103/427 (24%), Positives = 156/427 (36%), Gaps = 62/427 (14%)
Query: 149 PEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYL 208
P + L+ ++L +PV N+ S Y + + P G +
Sbjct: 5 PRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVS 63
Query: 209 FLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVP 268
L+ R+ +LEL+N LS S+P+ + L L S N L +P
Sbjct: 64 RLRDCL-----------DRQAHELELNNLGLS-SLPELPPH---LESLVASCNSLT-ELP 107
Query: 269 SSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYF 328
+L SL + + LS P L L V NQ LP + S L+
Sbjct: 108 ELPQSLKSLLVDNNNLKALSDLPP-------LLEYLGVSNNQLE-KLP-ELQNSSFLKII 158
Query: 329 SVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELS 388
V +N + LP SLE + NQL + P L N L
Sbjct: 159 DVDNN-SLKKLPDLP---PSLEFIAAGNNQL--EELPELQNLPFLTAIYADNNS----LK 208
Query: 389 SNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDL 448
L + N + PE+ N L + +N L +P +L +LN
Sbjct: 209 KLPDLPLSLESIVAGNNILE--ELPELQNLPFLTTIYADNNLLK-TLPDLPPSLEALN-- 263
Query: 449 ILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIP 508
+ N L+ +P LT L + + S+ P L+YLN SSNE +
Sbjct: 264 -VRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPP-------NLYYLNASSNEIR-SLC 313
Query: 509 IQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSI 568
L EL++S+N L E+P LE+L S N+L+ +P +N L +
Sbjct: 314 DLPPSLE---ELNVSNNKLI-ELPALPPR---LERLIASFNHLA-EVPELPQN---LKQL 362
Query: 569 DISYNEL 575
+ YN L
Sbjct: 363 HVEYNPL 369
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 5e-46
Identities = 93/425 (21%), Positives = 149/425 (35%), Gaps = 58/425 (13%)
Query: 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMF 140
L HL L + N L +P +L L N + S L LE L +
Sbjct: 88 ELPPHLESLVASCNSL-TELPELPQSLKSLLVDNNNLKALSD-------LPPLLEYLGVS 139
Query: 141 VNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIG 200
N L +PE+ + S LK + +D N L +P +L + NN L +
Sbjct: 140 NNQLE-KLPELQNSSFLKIIDVDNNSLKK-LPDLPPSLEFI---AAGNNQL--EELPELQ 192
Query: 201 NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQ 260
NL L ++ N L+ +P L + NN L +P E+ NL LT +
Sbjct: 193 NLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADN 246
Query: 261 NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320
N L+ T+P +L +L ++ DN L+ +P+ + L+ + + P
Sbjct: 247 NLLK-TLPDLPPSLEAL---NVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPP---- 297
Query: 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380
+L Y + N I SL SLE + + N+LI + L+ S+
Sbjct: 298 ---NLYYLNASSNE-IRSLCDLP---PSLEELNVSNNKLI-ELPALPP---RLERLIASF 346
Query: 381 NKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELA 440
N E+ L L + N + P + L N + +VP
Sbjct: 347 NHL-AEVPEL---PQNLKQLHVEYNPLRE-FPDIPESVEDLR-----MNSHLAEVPELPQ 396
Query: 441 NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500
NL L+ + N L P + DL +++ R KL
Sbjct: 397 NLKQLH---VETNPLRE-FPDIPESVEDL---RMNSERVVDPYEFAHETTDKLEDDVFEH 449
Query: 501 NEFSQ 505
+
Sbjct: 450 HHHHH 454
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 4e-53
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 36/280 (12%)
Query: 697 IGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G +G K +G+ + +K+L F ET Q+ FL E+K + + H N++KF G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEET--QRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+ + EY++ G+L I+ S ++ WS+RV+ K +A ++Y+H I+H
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLH---SMNIIH 131
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLL--------------KPDSSNWSELAGTYGYVAP 861
RD++S N L+ V+DFG A+L+ KPD + G ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 862 ELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921
E+ EK DV+SFG++ E+I + D M+ ++
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIGRVNA--------DPDYLPRTMDFGLNVRGFLDRY 243
Query: 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
P + S + + C D +PE+RP+ ++ L
Sbjct: 244 CP------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWL 277
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 4e-53
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 47/299 (15%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSE--IKALTGVRHRNIVKFY 753
C+G+G YG V++ G+ VAVK S +K + E + +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSS-----RDEKSWFRETELYNTVMLRHENILGFI 68
Query: 754 GFCSHARHS----FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE- 808
+RHS +L+ Y E GSL L T +D + ++ +A L+++H E
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 809 ----CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL----AGTYGYVA 860
+P I HRD+ SKN+L+ + ++D G A + ++ GT Y+A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 861 PEL------AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE---A 911
PE+ ++ D+++FG++ EV + ++ P ++ +
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY---KPPFYDVVPNDPS 242
Query: 912 IDHMFDA--------RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ M +P W L +++ C NP R + K L+
Sbjct: 243 FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMK---ECWYQNPSARLTALRIKKTLT 298
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 5e-53
Identities = 67/480 (13%), Positives = 147/480 (30%), Gaps = 47/480 (9%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHM 139
+ + ++ L + S + +K L+LS N S +++ T LE+L++
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 140 FVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSI 199
N L ++ LS+L+ L L+ N++ + S+ L+ NN++ + S
Sbjct: 66 SSNVLY-ETLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNI-SRVSCSR 118
Query: 200 GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG-SIPQEIGNLKLLTDLSL 258
++L N + G ++ L+L N++ + + + L L+L
Sbjct: 119 --GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176
Query: 259 SQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQN 318
N + V + + L+ L L N+L+ + E + + +S+ N+
Sbjct: 177 QYNFIY-DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV------ 227
Query: 319 ICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDL 378
+ K LR +LE L N DF N ++ +
Sbjct: 228 -------------------LIEKALRFSQNLEHFDLRGNGFHCGTLRDF-FSKNQRVQTV 267
Query: 379 SYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHL----VGK 434
+ N C + P L + + +
Sbjct: 268 AKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETER 327
Query: 435 VPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLH 494
+ E N ++ Q I L+ + + +L
Sbjct: 328 LECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELD 387
Query: 495 Y--LNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552
Q + L L + + + + + ++ ++ + +
Sbjct: 388 GTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEM--YVEQQSVQNNAIRDWDMYQHKET 445
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 8e-48
Identities = 60/387 (15%), Positives = 129/387 (33%), Gaps = 20/387 (5%)
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLL 253
+I N + + + L+ + S + +L+LS N LS ++ L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 254 TDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313
L+LS N L L +LS+L L L +N + E+ ++ +L N +
Sbjct: 61 ELLNLSSNVL--YETLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS- 112
Query: 314 FLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG-NISDDFGIYPN 372
+ + Q + + +N + ++ + L+ N++ N ++
Sbjct: 113 RVSCSRGQ--GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 373 LKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLV 432
L+ +L YN Y ++ +L L ++ N + + PE +A + + +N LV
Sbjct: 171 LEHLNLQYNFIY-DVKGQ-VVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227
Query: 433 GKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLK 492
+ L +L L GN G + + ++ K N
Sbjct: 228 -LIEKALRFSQNLEHFDLRGNGFHCGTLRDF-FSKNQRVQTVAKQTVKKLTGQNEEECTV 285
Query: 493 LHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG----EIPPEICNLESLEKLNLSH 548
+ + +L+ L + + +G + E N +++
Sbjct: 286 PTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALK 345
Query: 549 NNLSGSIPTNFENMHGLLSIDISYNEL 575
I ++++ L
Sbjct: 346 EQYRTVIDQVTLRKQAKITLEQKKKAL 372
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 8e-48
Identities = 66/416 (15%), Positives = 135/416 (32%), Gaps = 23/416 (5%)
Query: 175 IGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLEL 234
N + + ++SL ++ S + N+ L L N L + KL L L
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQE 294
S+N L ++ +L L L L+ N + L S+E LH +N +S +
Sbjct: 66 SSNVLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS-RVS-- 115
Query: 295 IGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIG-SLPKTLRNCTSLERVR 353
++ + N+ T + +QY + N + + + +LE +
Sbjct: 116 CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175
Query: 354 LEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPP 413
L+ N + ++ LK DLS NK + + + + + + N + I
Sbjct: 176 LQYNFIY-DVKGQVVF-AKLKTLDLSSNKL-AFMGPEFQSAAGVTWISLRNNKLV-LIEK 231
Query: 414 EIGNATQLHELDFSSNHLV-GKVPLELANLTSLNDLILNGNQ-LSGGIPPELGLLTDLGY 471
+ + L D N G + + + + + L+G E + T Y
Sbjct: 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHY 291
Query: 472 LDLSANRFSKSIPGNMGYLLKLHYLNMS-SNEFSQEIPIQLGKLVQLSELDLSHNLLRGE 530
+ L + + +S ++ + + + E+D R
Sbjct: 292 GAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYR-T 350
Query: 531 IPPEIC-NLESLEKLNLSHNNLSGSIPTNFE---NMHGLLSIDISYNELDGPIPSI 582
+ ++ ++ L L + + G L + EL
Sbjct: 351 VIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQ 406
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 9e-47
Identities = 60/460 (13%), Positives = 137/460 (29%), Gaps = 23/460 (5%)
Query: 124 IPSEIGLLTNLEVLHMFVNHLNGSIPEIGH-LSSLKNLALDGNHLDGPIPVSIGNLSSLV 182
I ++ + + L ++ + ++K L L GN L + + L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 183 GLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242
L L +N L + +LS L L L N++ + L +NN +S
Sbjct: 62 LLNLSSNVL--YETLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS-R 113
Query: 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG-HIPQEIGNFMNL 301
+ + ++ L+ N++ S ++ L L N++ + + + L
Sbjct: 114 VS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL 171
Query: 302 NSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG 361
L++ N + + + L+ + N + + ++ + + L N+L+
Sbjct: 172 EHLNLQYNFIYD-VKGQVVFA-KLKTLDLSSNK-LAFMGPEFQSAAGVTWISLRNNKLV- 227
Query: 362 NISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQL 421
I NL+ FDL N F+ + + + +A + T
Sbjct: 228 LIEKALRFSQNLEHFDLRGNGFHC-GTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286
Query: 422 HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSG----GIPPELGLLTDLGYLDLSAN 477
+ + L +L G + E +D
Sbjct: 287 TLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKE 346
Query: 478 RFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICN 537
++ I L +++ +L + L + + E+
Sbjct: 347 QYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAEL-DGTLQQAVGQIELQHATEE 405
Query: 538 LESLEKLNLSHNNLS-GSIPTNFENMHGLLSIDISYNELD 576
L+ L + + + D+ ++
Sbjct: 406 QSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKET 445
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 5e-36
Identities = 67/469 (14%), Positives = 136/469 (28%), Gaps = 63/469 (13%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
S L LDLN N + + ++ L+ ++N+ S ++
Sbjct: 75 DLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS-RVSCSR---------- 118
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPS 197
KN+ L N + + G S + L L N + +
Sbjct: 119 ---------------GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAE 163
Query: 198 SIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLS 257
+ L +L L+ N + KL L+LS+N+L+ + E + +T +S
Sbjct: 164 LAASSDTLEHLNLQYNFIYDVKGQVV--FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWIS 220
Query: 258 LSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQ 317
L N+L + +L +LE L N ++ F + Q L
Sbjct: 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDF--FSKNQRVQTVAKQTVKKLTG 277
Query: 318 NICQSGSLQYFSVHDNYFIGSLPK-TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLF 376
+ ++ + Y LP +L+R G+ ++
Sbjct: 278 QNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETE----------- 326
Query: 377 DLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVP 436
L N + + I L+ L +V
Sbjct: 327 ---------RLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVS 377
Query: 437 LELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS-KSIPGNMGYLLKLHY 495
L+ + + + L L R+ + +
Sbjct: 378 NGRRAHAELDGTLQQAVGQ-IELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRD 436
Query: 496 LNMSSNEFSQEIPIQLGKLVQLSE-LDLSHNLLRGEIPPEICNLESLEK 543
+M ++ +Q + + +L +L+ DL+ + + ++L
Sbjct: 437 WDMYQHKETQ-LAEENARLKKLNGEADLALASANATLQELVVREQNLAS 484
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 123 bits (309), Expect = 1e-29
Identities = 42/315 (13%), Positives = 90/315 (28%), Gaps = 12/315 (3%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG-KIPSEIGLLTN 133
+ + S + L N++ G +++++L+L N
Sbjct: 111 ISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 134 LEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG 193
LE L++ N + + + LK L L N L + + + + + L NN L
Sbjct: 171 LEHLNLQYNFIY-DVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKL-V 227
Query: 194 SIPSSIGNLSNLVYLFLKKNHLR-GPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKL 252
I ++ NL + L+ N G + F +++ ++ + Q +
Sbjct: 228 LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV--QTVAKQTVKKLTGQNEEECTV 285
Query: 253 LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG----HIPQEIGNFMNLNSLSVGG 308
T L +L+ G + E N +
Sbjct: 286 PTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALK 345
Query: 309 NQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFG 368
Q+ + Q + + + R L+ + I +
Sbjct: 346 EQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQI-ELQHATE 404
Query: 369 IYPNLKLFDLSYNKF 383
L+L ++
Sbjct: 405 EQSPLQLLRAIVKRY 419
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 2e-23
Identities = 38/259 (14%), Positives = 70/259 (27%), Gaps = 11/259 (4%)
Query: 74 TLDQFPFSLFSHLSYLDLNENQLYG-NIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLT 132
L S + YLDL N++ N + L+ LNL N + ++ +
Sbjct: 134 MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQV-VFA 191
Query: 133 NLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSL- 191
L+ L + N L PE + + ++L N L I ++ +L L N
Sbjct: 192 KLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250
Query: 192 PGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLK 251
G++ + + ++ + T L
Sbjct: 251 CGTLRDFFSKNQRVQTVAK--QTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLI 308
Query: 252 LLTDLSLSQNQLRGTVPSSLS----NLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVG 307
L + +G+ L N + + Q I Q +L
Sbjct: 309 ALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQK 368
Query: 308 GNQFTGFLPQNICQSGSLQ 326
+ L
Sbjct: 369 KKALDEQVSNGRRAHAELD 387
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 2e-15
Identities = 29/307 (9%), Positives = 75/307 (24%), Gaps = 33/307 (10%)
Query: 75 LDQFPFSLF-SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTN 133
+ + + L LDL+ N+L + + + +++L +N I + N
Sbjct: 181 IYDVKGQVVFAKLKTLDLSSNKL-AFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQN 238
Query: 134 LEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSL-- 191
LE + N + + + + + + + +
Sbjct: 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCED 298
Query: 192 --------------------------PGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGY 225
+ N + + K R I
Sbjct: 299 LPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLR 358
Query: 226 LRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEIL-HLYD 284
+ LE L + L + + + S L++L +
Sbjct: 359 KQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVG-QIELQHATEEQSPLQLLRAIVK 417
Query: 285 NQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLR 344
++ Q+ + + ++ T +N + +L + +
Sbjct: 418 RYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVV 477
Query: 345 NCTSLER 351
+L
Sbjct: 478 REQNLAS 484
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 186 bits (473), Expect = 2e-52
Identities = 72/313 (23%), Positives = 117/313 (37%), Gaps = 44/313 (14%)
Query: 679 LVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSE- 737
LV I + I + IG+G YG V+ + G+ VAVK + T + + E
Sbjct: 30 LVQRTIAKQIQ-MVK--QIGKGRYGEVWMGKW-RGEKVAVKVFFT-----TEEASWFRET 80
Query: 738 -IKALTGVRHRNIVKFYGFCSHARHS----FLVYEYLERGSLARILSSETATEMDWSKRV 792
I +RH NI+ F S +L+ +Y E GSL L S T +D +
Sbjct: 81 EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSML 137
Query: 793 NVIKGVAHALSYMHHE-----CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847
+ L ++H E +P I HRD+ SKN+L+ ++D G A D++
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
Query: 848 NWSEL----AGTYGYVAPEL------AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSS 897
GT Y+ PE+ + D+YSFG++ EV + ++
Sbjct: 198 EVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257
Query: 898 LSDSSLPGANMNEAIDHMFDA--------RLPPPWLEVGVEDKLKSIIEVALSCVDANPE 949
+ + + M + P W ++ ++ C NP
Sbjct: 258 YQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMT---ECWAHNPA 314
Query: 950 RRPNMQIVCKLLS 962
R V K L+
Sbjct: 315 SRLTALRVKKTLA 327
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 5e-52
Identities = 73/316 (23%), Positives = 124/316 (39%), Gaps = 50/316 (15%)
Query: 679 LVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSE- 737
LV I R+I E IG+G +G V++ + G+ VAVK S ++ + E
Sbjct: 35 LVQRTIARTIV-LQE--SIGKGRFGEVWRGKW-RGEEVAVKIFSS-----REERSWFREA 85
Query: 738 -IKALTGVRHRNIVKFYGFCSHARHS----FLVYEYLERGSLARILSSETATEMDWSKRV 792
I +RH NI+ F + + +LV +Y E GSL L+ T + +
Sbjct: 86 EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMI 142
Query: 793 NVIKGVAHALSYMHHE-----CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847
+ A L+++H E +P I HRD+ SKN+L+ ++D G A +
Sbjct: 143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 202
Query: 848 NWSEL----AGTYGYVAPEL------AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSS 897
GT Y+APE+ + ++ D+Y+ G++ E+ +
Sbjct: 203 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG---GI 259
Query: 898 LSDSSLPGANM---NEAIDHMFDA--------RLPPPWLEVGVEDKLKSIIEVALSCVDA 946
D LP ++ + +++ M +P W + I+ C A
Sbjct: 260 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR---ECWYA 316
Query: 947 NPERRPNMQIVCKLLS 962
N R + K LS
Sbjct: 317 NGAARLTALRIKKTLS 332
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 1e-51
Identities = 56/282 (19%), Positives = 105/282 (37%), Gaps = 43/282 (15%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG+G +G VY G+ VA++ + K F E+ A RH N+V F G C
Sbjct: 41 IGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
H ++ + +L ++ +D +K + + + + Y+H I+H+
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLH---AKGILHK 154
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKL-----LKPDSSNWSELAGTYGYVAPEL-------- 863
D+ SKNV D + ++DFG + G ++APE+
Sbjct: 155 DLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDT 213
Query: 864 -AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN-EAIDHM--FDAR 919
+ ++ DV++ G + E+ + P EAI +
Sbjct: 214 EEDKLPFSKHSDVFALGTIWYELHARE-------------WPFKTQPAEAIIWQMGTGMK 260
Query: 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
++G+ ++ I+ C E RP +++ L
Sbjct: 261 PNLS--QIGMGKEISDILL---FCWAFEQEERPTFTKLMDML 297
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 6e-51
Identities = 67/272 (24%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG G +G+VYK + VAVK L+ + F +E+ L RH NI+ F G+
Sbjct: 32 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ + + +V ++ E SL L + T+ + K +++ + A + Y+H I+HR
Sbjct: 90 TAPQLA-IVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLK--PDSSNWSELAGTYGYVAPEL---AYTMKVTE 871
D+ S N+ L + + DFG A S + +L+G+ ++APE+ + +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 872 KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV--GV 929
+ DVY+FG++ E++ GQ P ++ N ++ I+ + L P +V
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNIN----------NRDQIIEMVGRGSLSPDLSKVRSNC 254
Query: 930 EDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
++K ++ C+ + RP+ +I+ ++
Sbjct: 255 PKRMKRLMA---ECLKKKRDERPSFPRILAEI 283
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 3e-50
Identities = 52/309 (16%), Positives = 104/309 (33%), Gaps = 20/309 (6%)
Query: 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNH 143
S L + + + + + H N ++
Sbjct: 12 SGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQIETRTGRA 67
Query: 144 LNGSIPEIGHLSS--LKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGN 201
L + + + L L L P LS L + + L +P ++
Sbjct: 68 LKATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQ 125
Query: 202 LSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKL--------- 252
+ L L L +N LR +P+S L +L +L + +P+ + +
Sbjct: 126 FAGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVN 184
Query: 253 LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312
L L L +R ++P+S++NL +L+ L + ++ LS + I + L L + G
Sbjct: 185 LQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTAL 242
Query: 313 GFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPN 372
P L+ + D + +LP + T LE++ L + + P
Sbjct: 243 RNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302
Query: 373 LKLFDLSYN 381
+ + +
Sbjct: 303 NCIILVPPH 311
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 4e-48
Identities = 60/336 (17%), Positives = 104/336 (30%), Gaps = 27/336 (8%)
Query: 144 LNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLS 203
+ S H S +NL G+ P + Y + + N +
Sbjct: 1 MGSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQR---HYNADRNRW-HSAWRQANSN 56
Query: 204 NLVYLFLKKNHLRGPIPSSFGYLR--KLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQN 261
N L+ LEL + L P + L L +++
Sbjct: 57 NPQIETRTGRALKA-TADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAA 114
Query: 262 QLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQ 321
L +P ++ + LE L L N L +P I + L LS+ LP+ +
Sbjct: 115 GLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAS 172
Query: 322 SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYN 381
+ + +L+ +RLE + ++ NLK + +
Sbjct: 173 T---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNS 216
Query: 382 KFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELAN 441
L + P+L L + G PP G L L + +PL++
Sbjct: 217 PL-SALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHR 275
Query: 442 LTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSAN 477
LT L L L G +P + L + + +
Sbjct: 276 LTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 6e-48
Identities = 54/356 (15%), Positives = 102/356 (28%), Gaps = 51/356 (14%)
Query: 174 SIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLE 233
+ S LY ++ + + H
Sbjct: 7 HHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQIET 62
Query: 234 LSNNQLSGSIPQEIGNLKL--LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHI 291
+ L + + + L L L P LS L+ + + L +
Sbjct: 63 RTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-EL 119
Query: 292 PQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLER 351
P + F L +L++ N LP +I L+ S+ + LP+ L + +
Sbjct: 120 PDTMQQFAGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDASG- 177
Query: 352 VRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGI 411
+ NL+ L + + S +
Sbjct: 178 --------------EHQGLVNLQSLRLEWTG----IRS---------------------L 198
Query: 412 PPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGY 471
P I N L L ++ L + + +L L +L L G PP G L
Sbjct: 199 PASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257
Query: 472 LDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLL 527
L L ++P ++ L +L L++ +P + +L + + +L
Sbjct: 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 6e-47
Identities = 57/364 (15%), Positives = 113/364 (31%), Gaps = 68/364 (18%)
Query: 104 IGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALD 163
+ + + L + + + S + ++ +
Sbjct: 8 HHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNAD---RNRWHSAWRQANSNNPQIETRT 64
Query: 164 GNHLDGPIPVSIGNLSS--LVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPS 221
G L + + + V L L + LP P LS+L ++ + L +P
Sbjct: 65 GRALKA-TADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLME-LPD 121
Query: 222 SFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSN-------- 273
+ L L L+ N L ++P I +L L +LS+ +P L++
Sbjct: 122 TMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180
Query: 274 -LSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHD 332
L +L+ L L + +P I N NL SL + + + L I L+ +
Sbjct: 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRG 238
Query: 333 NYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW 392
+ + P L+R L
Sbjct: 239 CTALRNYPPIFGGRAPLKR------------------------LILKDC----------- 263
Query: 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNG 452
+N+ +P +I TQL +LD + ++P +A L + +++
Sbjct: 264 ------------SNLL-TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPP 310
Query: 453 NQLS 456
+ +
Sbjct: 311 HLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 4e-45
Identities = 57/249 (22%), Positives = 99/249 (39%), Gaps = 19/249 (7%)
Query: 59 GRIISINLTSTSLKGT-LDQFPFSLF--SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNL 115
+ L+ L QFP F SHL ++ ++ L +P + L+ L L
Sbjct: 76 EDATQPGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGL-MELPDTMQQFAGLETLTL 134
Query: 116 SSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE----------IGHLSSLKNLALDGN 165
+ N +P+ I L L L + +PE L +L++L L+
Sbjct: 135 ARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWT 193
Query: 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGY 225
+ +P SI NL +L L + N+ L ++ +I +L L L L+ P FG
Sbjct: 194 GIRS-LPASIANLQNLKSLKIRNSPL-SALGPAIHHLPKLEELDLRGCTALRNYPPIFGG 251
Query: 226 LRKLTKLELSN-NQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYD 284
L +L L + + L ++P +I L L L L +PS ++ L + I+ +
Sbjct: 252 RAPLKRLILKDCSNLL-TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPP 310
Query: 285 NQLSGHIPQ 293
+ +
Sbjct: 311 HLQAQLDQH 319
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-37
Identities = 46/354 (12%), Positives = 101/354 (28%), Gaps = 75/354 (21%)
Query: 222 SFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILH 281
+ L + + + + ++ +N ++ +I
Sbjct: 7 HHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNNPQIET 62
Query: 282 LYDNQLSGHIPQEIGN--FMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSL 339
L + + +L +
Sbjct: 63 RTGRALK-ATADLLEDATQPGRVALELRSVPLP-------------------------QF 96
Query: 340 PKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGI 399
P + L+ + ++ L+ + D + L+ L+ N L +
Sbjct: 97 PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNP----LRA---------- 141
Query: 400 LKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGI 459
+P I + +L EL + + ++P LA+ +
Sbjct: 142 -----------LPASIASLNRLRELSIRACPELTELPEPLASTDA--------------- 175
Query: 460 PPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSE 519
E L +L L L +S+P ++ L L L + ++ S + + L +L E
Sbjct: 176 SGEHQGLVNLQSLRLEWTGI-RSLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEE 233
Query: 520 LDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573
LDL PP L++L L + ++P + + L +D+
Sbjct: 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGC 287
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-28
Identities = 38/176 (21%), Positives = 62/176 (35%), Gaps = 10/176 (5%)
Query: 84 SHLSYLDLNENQLYGNIPSPIGN---------LTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
+ L L + +P P+ + L L+ L L +P+ I L NL
Sbjct: 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNL 208
Query: 135 EVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
+ L + + L+ P I HL L+ L L G P G + L L L + S +
Sbjct: 209 KSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT 268
Query: 195 IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNL 250
+P I L+ L L L+ +PS L + + + +
Sbjct: 269 LPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVAR 324
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 5e-25
Identities = 41/244 (16%), Positives = 83/244 (34%), Gaps = 30/244 (12%)
Query: 336 IGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCP 395
+GS + + E + + + + D + D + + W
Sbjct: 1 MGSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRN-------RWHSAWRQA 53
Query: 396 QLGILKIAGNNITG--GIPPEIGNATQ--LHELDFSSNHLVGKVPLELANLTSLNDLILN 451
+I + +ATQ L+ S L + P + L+ L + ++
Sbjct: 54 NSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTID 112
Query: 452 GNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL 511
L +P + L L L+ N +++P ++ L +L L++ + E+P L
Sbjct: 113 AAGLME-LPDTMQQFAGLETLTLARNPL-RALPASIASLNRLRELSIRACPELTELPEPL 170
Query: 512 GKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDIS 571
+ E L +L+ L L + S+P + N+ L S+ I
Sbjct: 171 AST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIR 214
Query: 572 YNEL 575
+ L
Sbjct: 215 NSPL 218
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 175 bits (444), Expect = 9e-47
Identities = 99/487 (20%), Positives = 182/487 (37%), Gaps = 28/487 (5%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
L P L + L++++N + S I +L+KL+ L +S N S L
Sbjct: 12 LIHVPKDLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQEL 71
Query: 135 EVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDG-PIPVSIGNLSSLVGLYLYNNSLPG 193
E L + N L I +LK+L L N D PI GN+S L L L L
Sbjct: 72 EYLDLSHNKLV-KIS-CHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLL 253
S I +L+ L + L+ L + I ++ +
Sbjct: 130 SSVLPIAHLNISKVLLVLGETYGEKE--DPEGLQDFNTESLHIVFPTNKEFHFILDVSVK 187
Query: 254 TDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313
T +L + ++ + + + L+ + + LN++ N F
Sbjct: 188 TVANLELSNIK--------CVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIR 239
Query: 314 FLPQNICQSGSLQYFSVHDNYFIG-----SLPKTLRNCTSLERVRLEKNQLIGNISDDFG 368
L + ++ YFS+ + G + + +L ++ + S +
Sbjct: 240 IL--QLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYE 297
Query: 369 IYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSS 428
I+ N+ + + + + L + N +T + G+ T+L L
Sbjct: 298 IFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQM 357
Query: 429 NHL--VGKVPLELANLTSLNDLILNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSKSIPG 485
N L + K+ + SL L ++ N +S L L++S+N + +I
Sbjct: 358 NQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR 417
Query: 486 NMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEIC-NLESLEKL 544
+ ++ L++ SN+ + IP Q+ KL L EL+++ N L+ +P I L SL+K+
Sbjct: 418 CL--PPRIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKI 473
Query: 545 NLSHNNL 551
L N
Sbjct: 474 WLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 3e-41
Identities = 98/470 (20%), Positives = 157/470 (33%), Gaps = 57/470 (12%)
Query: 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNH 214
L + N++ I +LS L L + +N + S L YL L N
Sbjct: 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80
Query: 215 LRGPIPSSFGYLRKLTKLELSNNQLSGSIPQ--EIGNLKLLTDLSLSQNQLRGTVPSSLS 272
L S L L+LS N ++P E GN+ L L LS L + ++
Sbjct: 81 LVK---ISCHPTVNLKHLDLSFNAFD-ALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIA 136
Query: 273 N----------------------LSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQ 310
+ L L+ + I + ++ +
Sbjct: 137 HLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSN 196
Query: 311 FTGFLPQNICQSGSLQYFSVHDNYFIGSLPKT--------------LRNCTSLERVRLEK 356
L N C + N + +L L T++ +
Sbjct: 197 IKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISN 256
Query: 357 NQLIGNISDDFGIYPN-----LKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGI 411
+L G + Y L + + + F S + + I +
Sbjct: 257 VKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVH 316
Query: 412 PPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL---LTD 468
+ LDFS+N L V +LT L LIL NQL + + +
Sbjct: 317 MLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKS 375
Query: 469 LGYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLL 527
L LD+S N S + L LNMSSN + I L ++ LDL N +
Sbjct: 376 LQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL--PPRIKVLDLHSNKI 433
Query: 528 RGEIPPEICNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNELD 576
+ IP ++ LE+L++LN++ N L S+P F+ + L I + N D
Sbjct: 434 K-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 481
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-23
Identities = 55/346 (15%), Positives = 125/346 (36%), Gaps = 23/346 (6%)
Query: 57 HAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLS 116
+ +++ + + K + L + + + + + + L+ N+
Sbjct: 139 NISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIK 198
Query: 117 SNHFSGKIPSEIGLLTNLEVLHMFVN----------HLNGSIPEIGHLSSLKNLALDGNH 166
K + +L L+ N + I ++ +++ ++
Sbjct: 199 CVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVK 258
Query: 167 LDGPIPVSIGNLS-----SLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPS 221
L G + + S +L + ++ SN+ + R
Sbjct: 259 LQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML 318
Query: 222 SFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR--GTVPSSLSNLSSLEI 279
+ L+ SNN L+ ++ + G+L L L L NQL+ + + + SL+
Sbjct: 319 CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQ 378
Query: 280 LHLYDNQLSGHIPQEIGNFM-NLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGS 338
L + N +S + ++ +L SL++ N T + + C ++ +H N I S
Sbjct: 379 LDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR--CLPPRIKVLDLHSNK-IKS 435
Query: 339 LPKTLRNCTSLERVRLEKNQLIGNISDD-FGIYPNLKLFDLSYNKF 383
+PK + +L+ + + NQL ++ D F +L+ L N +
Sbjct: 436 IPKQVVKLEALQELNVASNQL-KSVPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 3e-13
Identities = 44/190 (23%), Positives = 72/190 (37%), Gaps = 8/190 (4%)
Query: 424 LDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSI 483
+D S N L+ VP +L+ L ++ N +S ++ L+ L L +S NR
Sbjct: 5 VDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLD 61
Query: 484 PGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG-EIPPEICNLESLE 542
+ +L YL++S N+ +I V L LDLS N I E N+ L+
Sbjct: 62 ISVFKFNQELEYLDLSHNKL-VKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLK 118
Query: 543 KLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGE 602
L LS +L S +++ + + E G E + E+L E
Sbjct: 119 FLGLSTTHLEKSSVLPIAHLNI-SKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKE 177
Query: 603 VSGLQPCKAL 612
+
Sbjct: 178 FHFILDVSVK 187
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 2e-12
Identities = 43/230 (18%), Positives = 68/230 (29%), Gaps = 6/230 (2%)
Query: 464 GLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLS 523
L L++S N S+ ++ L KL L +S N +L LDLS
Sbjct: 18 DLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLS 77
Query: 524 HNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN--FENMHGLLSIDISYNELDGPIPS 581
HN L +I +L+ L+LS N ++P F NM L + +S L+
Sbjct: 78 HNKLV-KISCH--PTVNLKHLDLSFNAFD-ALPICKEFGNMSQLKFLGLSTTHLEKSSVL 133
Query: 582 IEAFRHAPVEALQGNKGLCGEVSGLQPCKALKSYKHVHRKWRTVLFTVLPLLAALALIIG 641
A + L + + H+ +L + +
Sbjct: 134 PIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLE 193
Query: 642 LIGMFVCSQRRKKDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNF 691
L + + K LS LT I
Sbjct: 194 LSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQL 243
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 1e-46
Identities = 54/296 (18%), Positives = 121/296 (40%), Gaps = 15/296 (5%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHM 139
+ + ++ L + S + +K L+LS N S +++ T LE+L++
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 140 FVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSI 199
N L ++ LS+L+ L L+ N++ + S+ L+ NN++ + S
Sbjct: 66 SSNVLY-ETLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNI-SRVSCSR 118
Query: 200 GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG-SIPQEIGNLKLLTDLSL 258
++L N + G ++ L+L N++ + + + L L+L
Sbjct: 119 --GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176
Query: 259 SQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQN 318
N + V + + L+ L L N+L+ + E + + +S+ N+ + +
Sbjct: 177 QYNFIY-DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKA 232
Query: 319 ICQSGSLQYFSVHDNYF-IGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNL 373
+ S +L++F + N F G+L ++ V + + + +++ P L
Sbjct: 233 LRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTL 288
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 1e-42
Identities = 61/352 (17%), Positives = 119/352 (33%), Gaps = 42/352 (11%)
Query: 175 IGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLEL 234
N + + ++SL ++ S + N+ L L N L + KL L L
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQE 294
S+N L ++ +L L L L+ N + L S+E LH +N +S +
Sbjct: 66 SSNVLY-ETL-DLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS-RVSCS 117
Query: 295 IGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRL 354
++ + N+ T L + ++ + L
Sbjct: 118 R--GQGKKNIYLANNKITM-LR-----------------------DLDEGCRSRVQYLDL 151
Query: 355 EKNQLIG-NISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPP 413
+ N++ N ++ L+ +L YN Y ++ +L L ++ N + + P
Sbjct: 152 KLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQ-VVFAKLKTLDLSSNKLA-FMGP 208
Query: 414 EIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLD 473
E +A + + +N LV + L +L L GN G + +
Sbjct: 209 EFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDF-FSKNQRVQT 266
Query: 474 LSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG-KLVQLSELDLSH 524
++ K + G + L +++P +L+ L H
Sbjct: 267 VAKQTV-KKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALGHHHHHH 317
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 1e-41
Identities = 65/320 (20%), Positives = 114/320 (35%), Gaps = 21/320 (6%)
Query: 65 NLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124
+T +SLK ++ LDL+ N L + + TKL+ LNLSSN
Sbjct: 16 KVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE-- 72
Query: 125 PSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGL 184
++ L+ L L + N++ E+ S++ L N++ VS +
Sbjct: 73 TLDLESLSTLRTLDLNNNYVQ----ELLVGPSIETLHAANNNISR---VSCSRGQGKKNI 125
Query: 185 YLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSI 243
YL NN + G S + YL LK N + L L L N + +
Sbjct: 126 YLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DV 184
Query: 244 PQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNS 303
++ L L LS N+L + + + + + L +N+L I + + NL
Sbjct: 185 KGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH 241
Query: 304 LSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNI 363
+ GN F S + + +V + CT + + ++
Sbjct: 242 FDLRGNGFHC-GTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECT-VPTLGHYGAYCCEDL 299
Query: 364 SDDFGIYPNLKLFDLSYNKF 383
F +L L ++
Sbjct: 300 PAPFA----DRLIALGHHHH 315
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 3e-37
Identities = 50/359 (13%), Positives = 111/359 (30%), Gaps = 46/359 (12%)
Query: 124 IPSEIGLLTNLEVLHMFVNHLNGSIPEIGH-LSSLKNLALDGNHLDGPIPVSIGNLSSLV 182
I ++ + + L ++ + ++K L L GN L + + L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 183 GLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242
L L +N L + +LS L L L N++ + L +NN +S
Sbjct: 62 LLNLSSNVL--YETLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS-R 113
Query: 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG-HIPQEIGNFMNL 301
+ + ++ L+ N++ S ++ L L N++ + + + L
Sbjct: 114 VSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL 171
Query: 302 NSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG 361
L++ N + + + L+ + N + + ++ + + L N+L+
Sbjct: 172 EHLNLQYNFIYD-VKGQVVFA-KLKTLDLSSNK-LAFMGPEFQSAAGVTWISLRNNKLV- 227
Query: 362 NISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQL 421
I NL+ FDL N ++C L ++
Sbjct: 228 LIEKALRFSQNLEHFDLRGNG---------FHCGTLRDF--------------FSKNQRV 264
Query: 422 HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS 480
+ + + E + +L + P + L +
Sbjct: 265 QTVAKQTVKKLTGQNEEECTVPTL----GHYGAYCCEDLPAPFA---DRLIALGHHHHH 316
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 2e-36
Identities = 52/306 (16%), Positives = 105/306 (34%), Gaps = 16/306 (5%)
Query: 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNL 301
+I + N ++ + L+ + S + +++ L L N LS ++ F L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 302 NSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG 361
L++ N L + +L+ +++NY + L S+E + N I
Sbjct: 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNN-IS 112
Query: 362 NISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITG-GIPPEIGNATQ 420
+S G K L+ NK + ++ L + N I ++
Sbjct: 113 RVSCSRG--QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 421 LHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS 480
L L+ N + V L L L+ N+L+ + PE + ++ L N+
Sbjct: 171 LEHLNLQYNFIY-DVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227
Query: 481 KSIPGNMGYLLKLHYLNMSSNEFSQ-EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLE 539
I + + L + ++ N F + K ++ + E C +
Sbjct: 228 -LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286
Query: 540 SLEKLN 545
+L
Sbjct: 287 TLGHYG 292
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 3e-34
Identities = 48/254 (18%), Positives = 96/254 (37%), Gaps = 15/254 (5%)
Query: 324 SLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKF 383
+ V D+ +L ++ +++ + L N L + D + L+L +LS N
Sbjct: 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVL 70
Query: 384 YGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLT 443
Y + + + L L + N + E+ + L ++N++ + +
Sbjct: 71 YE--TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISR---VSCSRGQ 120
Query: 444 SLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSK-SIPGNMGYLLKLHYLNMSSNE 502
++ L N+++ + G + + YLDL N + L +LN+ N
Sbjct: 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180
Query: 503 FSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENM 562
++ Q+ +L LDLS N L + PE + + ++L +N L I
Sbjct: 181 IY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236
Query: 563 HGLLSIDISYNELD 576
L D+ N
Sbjct: 237 QNLEHFDLRGNGFH 250
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 3e-12
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Query: 482 SIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESL 541
+I + ++ + Q + + ELDLS N L ++ L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 542 EKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
E LNLS N L + E++ L ++D++ N +
Sbjct: 61 ELLNLSSNVLY-ETL-DLESLSTLRTLDLNNNYV 92
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 4e-45
Identities = 86/432 (19%), Positives = 148/432 (34%), Gaps = 71/432 (16%)
Query: 171 IPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT 230
I ++ +++ + L+N + K + +R + R++
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 72
Query: 231 KLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289
L L++ Q+ I + L + N +R P N+ L +L L N LS
Sbjct: 73 LLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS- 130
Query: 290 HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK-TLRNCTS 348
+P+ I F N L S+ +N + + T + TS
Sbjct: 131 SLPRGI--FHNTP---------------------KLTTLSMSNNN-LERIEDDTFQATTS 166
Query: 349 LERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT 408
L+ ++L N+L D + P+L ++SYN
Sbjct: 167 LQNLQLSSNRL---THVDLSLIPSLFHANVSYNLL------------------------- 198
Query: 409 GGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTD 468
+ + ELD S N + LT L L N L+ L
Sbjct: 199 ----STLAIPIAVEELDASHNSINVVRGPVNVELTILK---LQHNNLTD--TAWLLNYPG 249
Query: 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLR 528
L +DLS N K + + +L L +S+N + + + L LDLSHN L
Sbjct: 250 LVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL 308
Query: 529 GEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHA 588
+ + LE L L HN++ ++ H L ++ +S+N+ D FR+
Sbjct: 309 -HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWD-CNSLRALFRNV 363
Query: 589 PVEALQGNKGLC 600
A+ C
Sbjct: 364 ARPAVDDADQHC 375
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 5e-42
Identities = 74/416 (17%), Positives = 145/416 (34%), Gaps = 53/416 (12%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPI--GNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLE 135
+L + D++ + ++ L K + ++ K+P+ + +E
Sbjct: 14 DSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVE 72
Query: 136 VLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG 193
+L++ + I + +++ L + N + P N+ L L L N L
Sbjct: 73 LLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-S 130
Query: 194 SIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKL 252
S+P I N L L + N+L +F L L+LS+N+L+ + + +
Sbjct: 131 SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIPS 187
Query: 253 LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312
L ++S N L S+L+ ++E L N ++ + + + L L + N T
Sbjct: 188 LFHANVSYNLL-----STLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQHNNLT 239
Query: 313 GFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPN 372
L N L V L N+L + F
Sbjct: 240 -------------------------DTA-WLLNYPGLVEVDLSYNELEKIMYHPFVKMQR 273
Query: 373 LKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLV 432
L+ +S N+ L+ P L +L ++ N++ + +L L N +
Sbjct: 274 LERLYISNNRL-VALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI- 330
Query: 433 GKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMG 488
V L+L+ +L +L L+ N L ++ + I +
Sbjct: 331 --VTLKLSTHHTLKNLTLSHNDWDCN--SLRALFRNVARPAVDDADQHCKIDYQLE 382
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 8e-41
Identities = 85/470 (18%), Positives = 147/470 (31%), Gaps = 107/470 (22%)
Query: 100 IPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSSL 157
I S + +++ E L N +++ + + +P + +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQV 71
Query: 158 KNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG 217
+ L L+ + + + + L++ N +R
Sbjct: 72 ELLNLNDLQI---------------------EEID---TYAFAYAHTIQKLYMGFNAIRY 107
Query: 218 PIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSS 276
P F + LT L L N LS S+P+ I N LT LS+S N L + +S
Sbjct: 108 LPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 166
Query: 277 LEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFI 336
L+ L L N+L+ H+ + +L +V N +
Sbjct: 167 LQNLQLSSNRLT-HVD--LSLIPSLFHANVSYNLLS------------------------ 199
Query: 337 GSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQ 396
TL ++E + N I + +
Sbjct: 200 -----TLAIPIAVEELDASHNS-INVVRGPV--------------------------NVE 227
Query: 397 LGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS 456
L ILK+ NN+T + N L E+D S N L + + L L ++ N+L
Sbjct: 228 LTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 285
Query: 457 GGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQ 516
+ + L LDLS N + N +L L + N ++L
Sbjct: 286 -ALNLYGQPIPTLKVLDLSHNHL-LHVERNQPQFDRLENLYLDHNSIVT---LKLSTHHT 340
Query: 517 LSELDLSHNLLRGEIPPEICN-----LESLEKLNLSHNNLSGSIPTNFEN 561
L L LSHN CN ++ + + + I E+
Sbjct: 341 LKNLTLSHNDWD-------CNSLRALFRNVARPAVDDADQHCKIDYQLEH 383
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 2e-36
Identities = 59/337 (17%), Positives = 126/337 (37%), Gaps = 21/337 (6%)
Query: 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI-GNFMN 300
I + + D+ + L++ +I+ ++ + +P + +F
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQ 70
Query: 301 LNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK-TLRNCTSLERVRLEKNQL 359
+ L++ Q + ++Q + N I LP +N L + LE+N
Sbjct: 71 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFN-AIRYLPPHVFQNVPLLTVLVLERND- 128
Query: 360 IGNISDD-FGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNA 418
+ ++ F P L +S N + L L+++ N +T +
Sbjct: 129 LSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDL--SLI 185
Query: 419 TQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANR 478
L + S N L LA ++ +L + N ++ + + +L L L N
Sbjct: 186 PSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRG--PVNVELTILKLQHNN 237
Query: 479 FSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNL 538
+ + L +++S NE + + K+ +L L +S+N L + +
Sbjct: 238 LTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPI 294
Query: 539 ESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
+L+ L+LSHN+L + N L ++ + +N +
Sbjct: 295 PTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 330
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 2e-35
Identities = 67/368 (18%), Positives = 132/368 (35%), Gaps = 33/368 (8%)
Query: 65 NLTSTSLKG----TLDQFPFSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNH 119
N + K L F + L+LN+ Q+ I + ++ L + N
Sbjct: 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI-EEIDTYAFAYAHTIQKLYMGFNA 104
Query: 120 FSGKIPSEIGL-LTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSIG 176
+P + + L VL + N L+ S+P + L L++ N+L+ +
Sbjct: 105 IR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 162
Query: 177 NLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSN 236
+SL L L +N L + + + +L + + N L S+ + +L+ S+
Sbjct: 163 ATTSLQNLQLSSNRL-THVD--LSLIPSLFHANVSYNLL-----STLAIPIAVEELDASH 214
Query: 237 NQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI- 295
N ++ + + LT L L N L T + L N L + L N+L I
Sbjct: 215 NSIN-VVRGPV--NVELTILKLQHNNL--TDTAWLLNYPGLVEVDLSYNELE-KIMYHPF 268
Query: 296 GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355
L L + N+ L +L+ + N+ + + + LE + L+
Sbjct: 269 VKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNH-LLHVERNQPQFDRLENLYLD 326
Query: 356 KNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI 415
N + ++ + LK LS+N + + + + + I ++
Sbjct: 327 HNSI---VTLKLSTHHTLKNLTLSHNDWDCNSLRALF--RNVARPAVDDADQHCKIDYQL 381
Query: 416 GNATQLHE 423
+ E
Sbjct: 382 EHGLCCKE 389
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 7e-22
Identities = 49/267 (18%), Positives = 90/267 (33%), Gaps = 33/267 (12%)
Query: 331 HDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSN 390
+ L+ V ++ + N K+ + ++
Sbjct: 5 PRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAAL 64
Query: 391 WWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLI 449
+ Q+ +L + I I A + +L N + P N+ L L+
Sbjct: 65 LDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123
Query: 450 LNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIP 508
L N LS +P + L L +S N + L L +SSN +
Sbjct: 124 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH--- 179
Query: 509 IQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN---------- 558
+ L + L ++S+NLL + ++E+L+ SHN+++ +
Sbjct: 180 VDLSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGPVNVELTILKL 233
Query: 559 ----------FENMHGLLSIDISYNEL 575
N GL+ +D+SYNEL
Sbjct: 234 QHNNLTDTAWLLNYPGLVEVDLSYNEL 260
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 2e-43
Identities = 83/351 (23%), Positives = 134/351 (38%), Gaps = 42/351 (11%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
L P L +H++ L + +N L ++P+ L L +S N + +P L L
Sbjct: 52 LTTLPDCLPAHITTLVIPDNNL-TSLPALPPELRT---LEVSGNQLT-SLPVLPPGLLEL 106
Query: 135 EVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
+ + HL P + S L L + GN L +PV L L + +N L S
Sbjct: 107 SIFSNPLTHL----PAL--PSGLCKLWIFGNQLTS-LPVLPPGLQE---LSVSDNQL-AS 155
Query: 195 IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLT 254
+P+ L L+ N L +P L +L +S+NQL+ S+P L
Sbjct: 156 LPALPSELCK---LWAYNNQLTS-LPMLPS---GLQELSVSDNQLA-SLPTLPSE---LY 204
Query: 255 DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314
L N+L ++P+ S L+ L + N+L+ +P L L V GN+ T
Sbjct: 205 KLWAYNNRLT-SLPALPSG---LKELIVSGNRLT-SLPVLPS---ELKELMVSGNRLTS- 255
Query: 315 LPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLK 374
LP L SV+ N + LP++L + +S V LE N L +
Sbjct: 256 LPMLP---SGLLSLSVYRNQ-LTRLPESLIHLSSETTVNLEGNPLSERTLQALREITSAP 311
Query: 375 LFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELD 425
+ +F +S L + + + E A + H
Sbjct: 312 GYSGPIIRFDMAGASAPRETRALHLAA--ADWLVPAREGEPAPADRWHMFG 360
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 148 bits (374), Expect = 3e-37
Identities = 68/351 (19%), Positives = 114/351 (32%), Gaps = 71/351 (20%)
Query: 225 YLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYD 284
L + + L+ ++P + +T L + N L ++P+ L +LE +
Sbjct: 38 LNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPALPPELRTLE---VSG 90
Query: 285 NQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLR 344
NQL+ +P + L+ S L + N + SLP
Sbjct: 91 NQLT-SLPVLPPGLLELSIFSNPLTHLPALPS-------GLCKLWIFGNQ-LTSLPVLPP 141
Query: 345 NCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAG 404
L +S N+ L + +L L
Sbjct: 142 GLQEL---------------------------SVSDNQL-ASLPALP---SELCKLWAYN 170
Query: 405 NNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELG 464
N +T +P L EL S N L +P + L L N+L+ +P
Sbjct: 171 NQLTS-LPMLPSG---LQELSVSDNQLA-SLPTLPSELYKLW---AYNNRLTS-LPALPS 221
Query: 465 LLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSH 524
L L +S NR + S+P +L L +S N +P+ L L +
Sbjct: 222 GLK---ELIVSGNRLT-SLPVLPS---ELKELMVSGNRL-TSLPMLPS---GLLSLSVYR 270
Query: 525 NLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
N L +P + +L S +NL N LS + + + S +
Sbjct: 271 NQLT-RLPESLIHLSSETTVNLEGNPLS-ERT--LQALREITSAPGYSGPI 317
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 3e-26
Identities = 56/236 (23%), Positives = 85/236 (36%), Gaps = 26/236 (11%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
L P +L S L L NQL ++P L +L ++S N + +P+ L L
Sbjct: 153 LASLP-ALPSELCKLWAYNNQL-TSLPMLPSGLQEL---SVSDNQLA-SLPTLPSELYKL 206
Query: 135 EVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
+ N L S+P S LK L + GN L +PV L L + N L S
Sbjct: 207 WAYN---NRLT-SLPA--LPSGLKELIVSGNRLTS-LPVLPSELKEL---MVSGNRL-TS 255
Query: 195 IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLT 254
+P L + L + +N L +P S +L T + L N LS + +T
Sbjct: 256 LPMLPSGL---LSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLS-ERTLQALR--EIT 308
Query: 255 DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQ 310
+ + S LHL +P G + + G +
Sbjct: 309 SAPGYSGPIIRFDMAGASAPRETRALHLAAADWL--VPAREGEPAPADRWHMFGQE 362
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 3e-09
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 492 KLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNL 551
LN+ + + +P L ++ L + N L +P L +L +S N L
Sbjct: 41 GNAVLNVGESGLT-TLPDCLPA--HITTLVIPDNNLT-SLPALPPELRTL---EVSGNQL 93
Query: 552 SGSIPTNFENMHGLLSIDISYNELDGPIPSIE 583
+ S+P + L L +
Sbjct: 94 T-SLPVLPPGLLELSIFSNPLTHLPALPSGLC 124
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 7e-42
Identities = 87/511 (17%), Positives = 161/511 (31%), Gaps = 67/511 (13%)
Query: 65 NLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124
L + + D FP F+ L L L+ ++ +
Sbjct: 2 TLKAGQTQSFNDWFPDDNFASEVAAAFEMQAT---DTISEEQLATLTSLDCHNSSITD-- 56
Query: 125 PSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGL 184
+ I LT L L N++ + ++ ++L LA D N L + + L+ L L
Sbjct: 57 MTGIEKLTGLTKLICTSNNI--TTLDLSQNTNLTYLACDSNKLTN---LDVTPLTKLTYL 111
Query: 185 YLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244
N L + L YL +N L + +LT+L+ N+ +
Sbjct: 112 NCDTNKL---TKLDVSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD 165
Query: 245 QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSL 304
+ LT L S N++ +S L L+ N ++ + + + L L
Sbjct: 166 --VTPQTQLTTLDCSFNKITE---LDVSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFL 217
Query: 305 SVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS 364
N+ T ++ L YF N + L + + L + + L +
Sbjct: 218 DCSSNKLTEI---DVTPLTQLTYFDCSVNP-LTELDVS--TLSKLTTLHCIQTDL---LE 268
Query: 365 DDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHEL 424
D L F + EL + + QL +L IT ++ +L L
Sbjct: 269 IDLTHNTQLIYFQAEGCRKIKEL--DVTHNTQLYLLDCQAAGIT---ELDLSQNPKLVYL 323
Query: 425 DFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIP 484
++ L L++++ T L L + +G + L + + ++P
Sbjct: 324 YLNNTELTE---LDVSHNTKLKSLSCVNAHIQD--FSSVGKIPALNNNFEAEGQTI-TMP 377
Query: 485 GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKL 544
L V LD N + I P +
Sbjct: 378 KETLTNNSLTI------------------AVSPDLLDQFGNPM--NIEPGDGGVYDQATN 417
Query: 545 NLSHNNLSGSIPT---NFENMHGLLSIDISY 572
++ NLS P F + +G + ++
Sbjct: 418 TITWENLSTDNPAVTYTFTSENGAIVGTVTT 448
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 7e-40
Identities = 75/421 (17%), Positives = 147/421 (34%), Gaps = 45/421 (10%)
Query: 157 LKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLR 216
+ + +S L++L L +N+S+ + + I L+ L L N++
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSI--TDMTGIEKLTGLTKLICTSNNIT 77
Query: 217 GPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSS 276
LT L +N+L+ ++ + L LT L+ N+L +S
Sbjct: 78 TL---DLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLT---KLDVSQNPL 128
Query: 277 LEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFI 336
L L+ N L+ ++ + L L N+ L + L N I
Sbjct: 129 LTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNK-I 182
Query: 337 GSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSS-NWWNCP 395
L + L R+ + N + + D L D S NK L+ +
Sbjct: 183 TELD--VSQNKLLNRLNCDTNNIT-KL--DLNQNIQLTFLDCSSNK----LTEIDVTPLT 233
Query: 396 QLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQL 455
QL + N +T + + ++L L L+ ++L + T L G +
Sbjct: 234 QLTYFDCSVNPLT-ELD--VSTLSKLTTLHCIQTDLLE---IDLTHNTQLIYFQAEGCRK 287
Query: 456 SGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLV 515
++ T L LD A ++ ++ KL YL +++ E ++ + +
Sbjct: 288 I--KELDVTHNTQLYLLDCQAAGITEL---DLSQNPKLVYLYLNNTELTE---LDVSHNT 339
Query: 516 QLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
+L L + ++ + + + +L + N L+I +S + L
Sbjct: 340 KLKSLSCVNAHIQ-DFSS-VGKIPALNNNFEAEGQTITMPKETLTN--NSLTIAVSPDLL 395
Query: 576 D 576
D
Sbjct: 396 D 396
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 3e-32
Identities = 69/375 (18%), Positives = 122/375 (32%), Gaps = 63/375 (16%)
Query: 201 NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQ 260
N ++ V + S L LT L+ N+ ++ + I L LT L +
Sbjct: 19 NFASEVAAAFEMQAT---DTISEEQLATLTSLDCHNSSIT-DMT-GIEKLTGLTKLICTS 73
Query: 261 NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320
N + LS ++L L N+L+ ++ + L L+ N+ T
Sbjct: 74 NNITTL---DLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLTKL------ 121
Query: 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380
+ L + +N L D L D
Sbjct: 122 ---------------------DVSQNPLLTYLNCARNTLT---EIDVSHNTQLTELDCHL 157
Query: 381 NKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELA 440
NK +L QL L + N IT ++ L+ L+ +N++ L+L
Sbjct: 158 NKKITKLDVT--PQTQLTTLDCSFNKITEL---DVSQNKLLNRLNCDTNNITK---LDLN 209
Query: 441 NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500
L L + N+L+ ++ LT L Y D S N ++ L KL L+
Sbjct: 210 QNIQLTFLDCSSNKLTE---IDVTPLTQLTYFDCSVNPLTELDVST---LSKLTTLHCIQ 263
Query: 501 NEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFE 560
+ + I L QL R ++ + L L+ ++ +
Sbjct: 264 TDLLE---IDLTHNTQLIYFQAEGC--RKIKELDVTHNTQLYLLDCQAAGIT-ELD--LS 315
Query: 561 NMHGLLSIDISYNEL 575
L+ + ++ EL
Sbjct: 316 QNPKLVYLYLNNTEL 330
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 3e-16
Identities = 43/205 (20%), Positives = 78/205 (38%), Gaps = 19/205 (9%)
Query: 371 PNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNH 430
N + + + + L L ++IT I T L +L +SN+
Sbjct: 18 DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD--MTGIEKLTGLTKLICTSNN 75
Query: 431 LVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYL 490
+ L+L+ T+L L + N+L+ + + LT L YL+ N+ +K
Sbjct: 76 ITT---LDLSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTKLDVSQ---N 126
Query: 491 LKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNN 550
L YLN + N ++ I + QL+ELD N ++ L L+ S N
Sbjct: 127 PLLTYLNCARNTLTE---IDVSHNTQLTELDCHLNKK--ITKLDVTPQTQLTTLDCSFNK 181
Query: 551 LSGSIPTNFENMHGLLSIDISYNEL 575
++ + L ++ N +
Sbjct: 182 ITEL---DVSQNKLLNRLNCDTNNI 203
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 7e-42
Identities = 83/408 (20%), Positives = 143/408 (35%), Gaps = 70/408 (17%)
Query: 171 IPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT 230
I ++ +++ + L+N + K + +R + R++
Sbjct: 19 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 78
Query: 231 KLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289
L L++ Q+ I + L + N +R P N+ L +L L N LS
Sbjct: 79 LLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS- 136
Query: 290 HIPQEI-GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTS 348
+P+ I N L +LS+ N + D+ F + TS
Sbjct: 137 SLPRGIFHNTPKLTTLSMSNNNLE----------------RIEDDTF--------QATTS 172
Query: 349 LERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT 408
L+ ++L N+L D + P+L ++SYN
Sbjct: 173 LQNLQLSSNRL---THVDLSLIPSLFHANVSYNLL------------------------- 204
Query: 409 GGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTD 468
+ + ELD S N + LT L L N L+ L
Sbjct: 205 ----STLAIPIAVEELDASHNSINVVRGPVNVELTILK---LQHNNLTD--TAWLLNYPG 255
Query: 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLR 528
L +DLS N K + + +L L +S+N + + + L LDLSHN L
Sbjct: 256 LVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL 314
Query: 529 GEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576
+ + LE L L HN++ ++ H L ++ +S+N+ D
Sbjct: 315 -HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 155 bits (392), Expect = 1e-39
Identities = 89/498 (17%), Positives = 164/498 (32%), Gaps = 53/498 (10%)
Query: 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNH 143
Y Y I S + +++ E L N +++ +
Sbjct: 3 GQQRYNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNST 62
Query: 144 LNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGN 201
+ +P + ++ L L+ + + +
Sbjct: 63 MR-KLPAALLDSFRQVELLNLNDLQI---------------------EEID---TYAFAY 97
Query: 202 LSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQ 260
+ L++ N +R P F + LT L L N LS S+P+ I N LT LS+S
Sbjct: 98 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSN 156
Query: 261 NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320
N L + +SL+ L L N+L+ H+ + +L +V N + +
Sbjct: 157 NNLERIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIPSLFHANVSYNLLS-----TLA 208
Query: 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380
+++ N I + + L ++L+ N L + YP L DLSY
Sbjct: 209 IPIAVEELDASHNS-INVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSY 263
Query: 381 NKFYGELSSN-WWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLEL 439
N+ ++ + + +L L I+ N + + L LD S NHL+ V
Sbjct: 264 NEL-EKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQ 320
Query: 440 ANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMS 499
L +L L+ N + + L L LS N + + + +
Sbjct: 321 PQFDRLENLYLDHNSIV-TLKL--STHHTLKNLTLSHNDWDCN--SLRALFRNVARPAVD 375
Query: 500 SNEFSQEIPIQLGKLVQLSELD--LSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPT 557
+ +I QL + E D LL+ + + S + S+ +
Sbjct: 376 DADQHCKIDYQLEHGLCCKESDKPYLDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQS 435
Query: 558 NFENMHGLLSIDISYNEL 575
+ + + NE
Sbjct: 436 LSHYITQQGGVPLQGNEQ 453
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 1e-33
Identities = 84/508 (16%), Positives = 177/508 (34%), Gaps = 49/508 (9%)
Query: 42 TNITTPCTWSGISCNHAGRIISINLTSTSLKG------------TLDQFPFSLFSHLSYL 89
+N+ C + + + + + +L L F + L
Sbjct: 21 SNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELL 80
Query: 90 DLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEIGL-LTNLEVLHMFVNHLNGS 147
+LN+ Q+ I + ++ L + N +P + + L VL + N L+ S
Sbjct: 81 NLNDLQI-EEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-S 137
Query: 148 IPE--IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL 205
+P + L L++ N+L+ + +SL L L +N L + + + +L
Sbjct: 138 LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL-THVD--LSLIPSL 194
Query: 206 VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG 265
+ + N L S+ + +L+ S+N ++ + + LT L L N L
Sbjct: 195 FHANVSYNLL-----STLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQHNNL-- 244
Query: 266 TVPSSLSNLSSLEILHLYDNQLSGHIPQEI-GNFMNLNSLSVGGNQFTGFLPQNICQSGS 324
T + L N L + L N+L I L L + N+ L +
Sbjct: 245 TDTAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPT 302
Query: 325 LQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFY 384
L+ + N+ + + + LE + L+ N + ++ + LK LS+N +
Sbjct: 303 LKVLDLSHNH-LLHVERNQPQFDRLENLYLDHNSI---VTLKLSTHHTLKNLTLSHNDWD 358
Query: 385 GELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTS 444
+ + + + I ++ + E S + ++ +A
Sbjct: 359 CNSLRALF--RNVARPAVDDADQHCKIDYQLEHGLCCKE---SDKPYLDRLLQYIA---- 409
Query: 445 LNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFS 504
L ++ + G + + + + GN +++ L + +
Sbjct: 410 LTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGNEQLEAEVNELRAEVQQLT 469
Query: 505 QEIPIQLGKLVQLSELDLSHNLLRGEIP 532
E IQ +L+Q ++ NL R +P
Sbjct: 470 NE-QIQQEQLLQGLHAEIDTNLRRYRLP 496
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 4e-30
Identities = 83/516 (16%), Positives = 176/516 (34%), Gaps = 50/516 (9%)
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFS 121
+ + +++ L F L+ L L N L ++P I N KL L++S+N+
Sbjct: 103 KLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLE 160
Query: 122 GKIPSEI-GLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSS 180
+I + T+L+ L + N L + + + SL + + N L ++ +
Sbjct: 161 -RIEDDTFQATTSLQNLQLSSNRLT-HVD-LSLIPSLFHANVSYNLLS-----TLAIPIA 212
Query: 181 LVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240
+ L +NS+ + + L L L+ N+L + L +++LS N+L
Sbjct: 213 VEELDASHNSI-NVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELE 267
Query: 241 GSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFM 299
I ++ L L +S N+L + + +L++L L N L H+ + F
Sbjct: 268 -KIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFD 324
Query: 300 NLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIG-SLPKTLRNCTSLERVRLEKNQ 358
L +L + N L + +L+ ++ N + SL RN +++
Sbjct: 325 RLENLYLDHNSIV-TLKLSTHH--TLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHC 381
Query: 359 LIGNI-------SDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGI 411
I + Y + L ++ ++ C + +
Sbjct: 382 KIDYQLEHGLCCKESDKPYLDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYIT 441
Query: 412 PPEIGNATQLHELDFSSNHLVGKVP---------------LELANLTSLNDLILNGNQLS 456
+L+ N L +V L T+L L + L+
Sbjct: 442 QQGGVPLQGNEQLEAEVNELRAEVQQLTNEQIQQEQLLQGLHAEIDTNLRRYRLPKDGLA 501
Query: 457 GGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLK-LHYLNMSSNEFSQEIPIQLGKLV 515
+ T L R +++ K L + +++ + K
Sbjct: 502 RSSDNLNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQA 561
Query: 516 Q-LSELDLSHNLLRGEIPPEICNLESLEKLNLSHNN 550
+ E L ++ ++ + +++ H++
Sbjct: 562 ELRQETSLKRQKVK-QLEAKKNRNPDTRRVSHHHHH 596
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 93.5 bits (232), Expect = 1e-19
Identities = 53/274 (19%), Positives = 89/274 (32%), Gaps = 29/274 (10%)
Query: 322 SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYN 381
G +Y + L+ V ++ + N K+ +
Sbjct: 2 GGQQRYNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNS 61
Query: 382 KFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELA 440
++ + Q+ +L + I I A + +L N + P
Sbjct: 62 TMRKLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQ 120
Query: 441 NLTSLNDLILNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMS 499
N+ L L+L N LS +P + L L +S N + L L +S
Sbjct: 121 NVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLS 179
Query: 500 SNEFSQEIPIQLGKLVQLSELDLSHNLLRG------------------EIPPEICNLESL 541
SN + + L + L ++S+NLL + + L
Sbjct: 180 SNRLTH---VDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVN--VEL 234
Query: 542 EKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
L L HNNL+ N GL+ +D+SYNEL
Sbjct: 235 TILKLQHNNLT-DTAW-LLNYPGLVEVDLSYNEL 266
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 3e-40
Identities = 90/438 (20%), Positives = 150/438 (34%), Gaps = 61/438 (13%)
Query: 147 SIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSI-GNLSNL 205
+PE+ + + + L N + S L L L + + I ++ LS+L
Sbjct: 24 QVPEL--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81
Query: 206 VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQL-SGSIPQEI-GNLKLLTDLSLSQNQL 263
+ L L N +F L L L L+ L + L L L L N +
Sbjct: 82 IILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNI 141
Query: 264 RGTVPSSL-SNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS 322
+ P+S N+ +L L N++ I +E +N + L
Sbjct: 142 KKIQPASFFLNMRRFHVLDLTFNKVK-SICEED--LLNFQGKHFTLLR----LSSI---- 190
Query: 323 GSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDF-GIYPNLKLFDLSYN 381
+++ + TS+ + L N +++ F K+ L +
Sbjct: 191 ---TLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247
Query: 382 KFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELAN 441
Y SS K N G+ A+ + D S + + + ++
Sbjct: 248 NSYNMGSSFGHTN-----FKDPDNFTFKGLE-----ASGVKTCDLSKSKIFALLKSVFSH 297
Query: 442 LTSLNDLILNGNQLSGGIPPE-LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500
T L L L N+++ I LT L L+LS N SI M
Sbjct: 298 FTDLEQLTLAQNEINK-IDDNAFWGLTHLLKLNLSQNFL-GSIDSRM------------- 342
Query: 501 NEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEI-CNLESLEKLNLSHNNLSGSIPTN- 558
F L +L LDLS+N +R + + L +L++L L N L S+P
Sbjct: 343 --FE--------NLDKLEVLDLSYNHIR-ALGDQSFLGLPNLKELALDTNQLK-SVPDGI 390
Query: 559 FENMHGLLSIDISYNELD 576
F+ + L I + N D
Sbjct: 391 FDRLTSLQKIWLHTNPWD 408
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 2e-34
Identities = 97/481 (20%), Positives = 153/481 (31%), Gaps = 110/481 (22%)
Query: 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMF 140
L +H++Y+DL+ N + + L L+FL + I +
Sbjct: 27 ELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNT------------ 74
Query: 141 VNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIG 200
LSSL L LD N L +
Sbjct: 75 ----------FRGLSSLIILKLDYNQFL---------------------QLE---TGAFN 100
Query: 201 NLSNLVYLFLKKNHLRGPI--PSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLS 257
L+NL L L + +L G + + F L L L L +N + P N++ L
Sbjct: 101 GLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLD 160
Query: 258 LSQNQLRGTVPSSLSNLSS--LEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFL 315
L+ N+++ L N +L L L
Sbjct: 161 LTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQ--------------------------- 193
Query: 316 PQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDF-GIYPNLK 374
+++ + TS+ + L N +++ F K
Sbjct: 194 -------------DMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTK 240
Query: 375 LFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGK 434
+ L + Y SS K N G+ A+ + D S + +
Sbjct: 241 IQSLILSNSYNMGSSFGHTN-----FKDPDNFTFKGLE-----ASGVKTCDLSKSKIFAL 290
Query: 435 VPLELANLTSLNDLILNGNQLSGGIPPE-LGLLTDLGYLDLSANRFSKSIPGNM-GYLLK 492
+ ++ T L L L N+++ I LT L L+LS N SI M L K
Sbjct: 291 LKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDK 348
Query: 493 LHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHNLLRGEIPPEI-CNLESLEKLNLSHNN 550
L L++S N + + Q L L EL L N L+ +P I L SL+K+ L N
Sbjct: 349 LEVLDLSYNHI-RALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNP 406
Query: 551 L 551
Sbjct: 407 W 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 4e-34
Identities = 80/403 (19%), Positives = 144/403 (35%), Gaps = 43/403 (10%)
Query: 124 IPSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSI-GNLSS 180
+P L ++ + + +N + + E L L+ L ++ I + LSS
Sbjct: 25 VPE---LPAHVNYVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSS 80
Query: 181 LVGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKKNHLRGPI--PSSFGYLRKLTKLELSNN 237
L+ L L N + + L+NL L L + +L G + + F L L L L +N
Sbjct: 81 LIILKLDYNQF-LQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDN 139
Query: 238 QLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSS--LEILHLYDNQLS-----G 289
+ P N++ L L+ N+++ L N +L L L
Sbjct: 140 NIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYW 199
Query: 290 HIPQEIGNF---MNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNC 346
++ GN ++ +L + GN F + + + + + + +
Sbjct: 200 LGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTK-----------IQSLILSN 248
Query: 347 TSLERVRLEKNQL--IGNISDDFGIYPNLKLFDLSYNKFYGELSSN-WWNCPQLGILKIA 403
+ N + +K DLS +K L + + + L L +A
Sbjct: 249 SYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKI-FALLKSVFSHFTDLEQLTLA 307
Query: 404 GNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE 462
N I I T L +L+ S N L NL L L L+ N + + +
Sbjct: 308 QNEINK-IDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA-LGDQ 365
Query: 463 L-GLLTDLGYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNEF 503
L +L L L N+ KS+P + L L + + +N +
Sbjct: 366 SFLGLPNLKELALDTNQL-KSVPDGIFDRLTSLQKIWLHTNPW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 4e-21
Identities = 59/269 (21%), Positives = 95/269 (35%), Gaps = 32/269 (11%)
Query: 72 KGTLDQFPFSLFSHLS-----YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS 126
+ L F F+ L D+NE L T + L+LS N F +
Sbjct: 171 EEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAK 230
Query: 127 EI-GLLTNLEVLHMFVNHLNGSIPEIGH--LSSLKNLALDGNHLDGPIPVSIGNLSSLVG 183
+ ++ + +++ GH N G S +
Sbjct: 231 RFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEA-----------SGVKT 279
Query: 184 LYLYNNSLPGSIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242
L + + ++ S+ + ++L L L +N + ++F L L KL LS N L S
Sbjct: 280 CDLSKSKI-FALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLG-S 337
Query: 243 IPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI-GNFMN 300
I + NL L L LS N +R S L +L+ L L NQL +P I +
Sbjct: 338 IDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTS 396
Query: 301 LNSLSVGGNQFTGFLPQNICQSGSLQYFS 329
L + + N + C + Y S
Sbjct: 397 LQKIWLHTNPW-------DCSCPRIDYLS 418
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 149 bits (377), Expect = 5e-40
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 26/263 (9%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
IGRG + +VYK + + VA +L + ++ F E + L G++H NIV+FY
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92
Query: 755 ----FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+ LV E + G+L L M + + + L ++ H
Sbjct: 93 SWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV--MKIKVLRSWCRQILKGLQFL-HTRT 149
Query: 811 PPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
PPI+HRD+ N+ + + D G A L + + + GT ++APE+ Y K
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA--KAVIGTPEFMAPEM-YEEKY 206
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929
E DVY+FG+ LE+ ++P + + I + + P +
Sbjct: 207 DESVDVYAFGMCMLEMATSEYPYSECQNAA-----------QIYRRVTSGVKPASFDKVA 255
Query: 930 EDKLKSIIEVALSCVDANPERRP 952
++K IIE C+ N + R
Sbjct: 256 IPEVKEIIE---GCIRQNKDERY 275
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 1e-39
Identities = 93/488 (19%), Positives = 181/488 (37%), Gaps = 39/488 (7%)
Query: 111 KFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLD 168
++ S+ + + +P L + L + N ++ + I LS L+ L L N +
Sbjct: 34 SMVDYSNRNLT-HVPK--DLPPRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIR 89
Query: 169 GPIPVSI-GNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG-PIPSSFGYL 226
+ + L L + +N L +I +++L +L L N P+ FG L
Sbjct: 90 S-LDFHVFLFNQDLEYLDVSHNRL-QNISC--CPMASLRHLDLSFNDFDVLPVCKEFGNL 145
Query: 227 RKLTKLELSNNQLSGSIPQEIGNLKLLTD-LSLSQNQLRGTVPSSLSNLSSLEILHLYDN 285
KLT L LS + + +L L L L ++G SL + +LHL +
Sbjct: 146 TKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN-TTVLHLVFH 204
Query: 286 QLSGHIPQEIGNFMNLNSLSVGGNQFTGF-------LPQNICQSGSLQYFSVHDNYF--- 335
S Q + L L + + + + +L ++
Sbjct: 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWK 264
Query: 336 -IGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIY-----PNLKLFDLSYNKFYGELSS 389
L + +E + + + I + Y +L + + F +
Sbjct: 265 CSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEA 323
Query: 390 NWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLI 449
+ ++ I ++ ++ + + L+F+ N V + L L LI
Sbjct: 324 LYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLI 383
Query: 450 LNGNQLS--GGIPPELGLLTDLGYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNEFSQE 506
L N L + ++ L LD+S N + + + LN+SSN +
Sbjct: 384 LQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443
Query: 507 IPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-FENMHGL 565
+ L ++ LDL +N + IP ++ +L++L++LN++ N L S+P F+ + L
Sbjct: 444 VFRCLPP--KVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSL 499
Query: 566 LSIDISYN 573
I + N
Sbjct: 500 QYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 150 bits (379), Expect = 4e-38
Identities = 94/488 (19%), Positives = 169/488 (34%), Gaps = 34/488 (6%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTN 133
L P L L L++N + I L++L+ L LS N + + +
Sbjct: 43 LTHVPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQD 101
Query: 134 LEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDG-PIPVSIGNLSSLVGLYLYNNSLP 192
LE L + N L +I ++SL++L L N D P+ GNL+ L L L
Sbjct: 102 LEYLDVSHNRL-QNIS-CCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFR 159
Query: 193 GSIPSSIGNLS-NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLK 251
+ +L + + L L H++G S T L L + S Q ++
Sbjct: 160 QLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIP-NTTVLHLVFHPNSLFSVQVNMSVN 218
Query: 252 LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQF 311
L L LS +L L S ++ L +
Sbjct: 219 ALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVT------------LQHIETTWKCS 266
Query: 312 TGFLPQNICQSGSLQYFSVHDNYFIGSLPK-----TLRNCTSLERVRLEKNQLIGNISDD 366
++Y ++++ + + + SL ++ + +
Sbjct: 267 VKLF--QFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEAL 324
Query: 367 FGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDF 426
+ ++ + + LS + + L N T + +L L
Sbjct: 325 YSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLIL 384
Query: 427 SSNHL--VGKVPLELANLTSLNDLILNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSKSI 483
N L KV L N++SL L ++ N L+ + L+LS+N + S+
Sbjct: 385 QRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV 444
Query: 484 PGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEIC-NLESLE 542
K+ L++ +N IP + L L EL+++ N L+ +P + L SL+
Sbjct: 445 FR--CLPPKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQ 500
Query: 543 KLNLSHNN 550
+ L N
Sbjct: 501 YIWLHDNP 508
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-29
Identities = 70/448 (15%), Positives = 136/448 (30%), Gaps = 73/448 (16%)
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKL 252
+P + L L +N + +L +L L LS+N++ S+ + +
Sbjct: 45 HVPKDL--PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQD 101
Query: 253 LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQL-SGHIPQEIGNFMNLNSLSVGGNQF 311
L L +S N+L+ + ++SL L L N + +E GN L L + +F
Sbjct: 102 LEYLDVSHNRLQ-NISC--CPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKF 158
Query: 312 TGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE--KNQLIGNISDDFG- 368
+ +Y I + + L N L +
Sbjct: 159 RQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVN 218
Query: 369 --IYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPP-----EIGNATQL 421
+ L L+ ++ +L + +I + +
Sbjct: 219 ALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPV 278
Query: 422 HELDFSSNHLVGKVPLELAN-----------------------------LTSLNDLILNG 452
L+ + + ++ E +N +L+
Sbjct: 279 EYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSI 338
Query: 453 NQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512
+ + +L+ + N F+ S+ L +L L + N +
Sbjct: 339 SDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGL-KNFFKVAL 397
Query: 513 KLVQLSEL---DLSHNLLRGEIPPEICNL-ESLEKLNLSHNNLSG--------------- 553
+S L D+S N L C ES+ LNLS N L+G
Sbjct: 398 MTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDL 457
Query: 554 ------SIPTNFENMHGLLSIDISYNEL 575
SIP + ++ L ++++ N+L
Sbjct: 458 HNNRIMSIPKDVTHLQALQELNVASNQL 485
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 89.2 bits (221), Expect = 2e-18
Identities = 59/341 (17%), Positives = 120/341 (35%), Gaps = 24/341 (7%)
Query: 62 ISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTK---LKFLNLSSN 118
I ++L S +KG + + + +L + N L+ + N L + L+
Sbjct: 174 ILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDE 233
Query: 119 HFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHL------SSLKNLALDGNHLDGPIP 172
+ + L +L++ + H+ + L ++ L + + I
Sbjct: 234 NCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERID 293
Query: 173 VSIGN-----LSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLR 227
L SL+ ++ N S + + + L +
Sbjct: 294 REEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPS 353
Query: 228 KLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQL 287
T L + N + S+ Q LK L L L +N L+ ++ L D L
Sbjct: 354 SFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSL 412
Query: 288 ----SGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTL 343
S + ++ L++ N TG + + C ++ +H+N I S+PK +
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR--CLPPKVKVLDLHNNR-IMSIPKDV 469
Query: 344 RNCTSLERVRLEKNQLIGNISDD-FGIYPNLKLFDLSYNKF 383
+ +L+ + + NQL ++ D F +L+ L N +
Sbjct: 470 THLQALQELNVASNQL-KSVPDGVFDRLTSLQYIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 1e-08
Identities = 43/212 (20%), Positives = 73/212 (34%), Gaps = 8/212 (3%)
Query: 368 GIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELDF 426
+ P K LS N + +L +L+++ N I + + L LD
Sbjct: 49 DLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS-LDFHVFLFNQDLEYLDV 107
Query: 427 SSNHLVGKVPLELANLTSLNDLILNGNQL-SGGIPPELGLLTDLGYLDLSANRFSKSIPG 485
S N L + + SL L L+ N + E G LT L +L LSA +F +
Sbjct: 108 SHNRLQN---ISCCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLL 164
Query: 486 NMGYL-LKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKL 544
+ +L L L++ S L + L L + ++ +L L
Sbjct: 165 PVAHLHLSCILLDLVSYHIKGGETESLQIP-NTTVLHLVFHPNSLFSVQVNMSVNALGHL 223
Query: 545 NLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576
LS+ L+ L+ + +
Sbjct: 224 QLSNIKLNDENCQRLMTFLSELTRGPTLLNVT 255
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 5e-06
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 65 NLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124
+++ SL + + L+L+ N L G++ + K+K L+L +N I
Sbjct: 409 DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL--PPKVKVLDLHNNRIM-SI 465
Query: 125 PSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLD 168
P ++ L L+ L++ N L S+P+ L+SL+ + L N D
Sbjct: 466 PKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWD 510
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 5e-37
Identities = 69/353 (19%), Positives = 132/353 (37%), Gaps = 41/353 (11%)
Query: 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289
+ + ++P+ I L L +N+++ ++ LE L L +N +S
Sbjct: 14 RAVLCHRKRFV-AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS- 69
Query: 290 HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK-TLRNCTS 348
+ G F NL +L+ + N + +P ++
Sbjct: 70 AVEP--GAFNNL---------------------FNLRTLGLRSN-RLKLIPLGVFTGLSN 105
Query: 349 LERVRLEKNQLIGNISDD-FGIYPNLKLFDLSYNKFYGELSSNW-WNCPQLGILKIAGNN 406
L ++ + +N+ I + D F NLK ++ N +S L L + N
Sbjct: 106 LTKLDISENK-IVILLDYMFQDLYNLKSLEVGDNDL-VYISHRAFSGLNSLEQLTLEKCN 163
Query: 407 ITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL 465
+T IP E + L L ++ L L L ++ + P
Sbjct: 164 LTS-IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 222
Query: 466 LTDLGYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSH 524
+L L ++ + ++P +L+ L +LN+S N S L +L++L E+ L
Sbjct: 223 GLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281
Query: 525 NLLRGEIPPEI-CNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNEL 575
L + P L L LN+S N L+ ++ + F ++ L ++ + N L
Sbjct: 282 GQLA-VVEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHSVGNLETLILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 5e-37
Identities = 71/372 (19%), Positives = 132/372 (35%), Gaps = 57/372 (15%)
Query: 184 LYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243
+ + ++P I + L L KN ++ F L +LEL+ N +S ++
Sbjct: 16 VLCHRKRFV-AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS-AV 71
Query: 244 PQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI-GNFMNL 301
NL L L L N+L+ + LS+L L + +N++ + + + NL
Sbjct: 72 EPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNL 130
Query: 302 NSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG 361
SL VG N ++ + SLE++ LEK L
Sbjct: 131 KSLEVGDNDLV-YIS-----------------------HRAFSGLNSLEQLTLEKCNLTS 166
Query: 362 NISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQL 421
++ L + L + ++ +L +L+I+ + P L
Sbjct: 167 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226
Query: 422 HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSK 481
L + +L L + +L L L L+ N +S + + +
Sbjct: 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS----------------TIEGSMLHE 270
Query: 482 SIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEIC-NLES 540
LL+L + + + + P L L L++S N L + + ++ +
Sbjct: 271 --------LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHSVGN 321
Query: 541 LEKLNLSHNNLS 552
LE L L N L+
Sbjct: 322 LETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 141 bits (356), Expect = 1e-35
Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 26/332 (7%)
Query: 48 CTWSG--ISCNHAG----------RIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQ 95
C+ + C+ ++L +K TL+Q F+ F HL L+LNEN
Sbjct: 9 CSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENI 67
Query: 96 LYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVLHMFVNHLNGSIPEI-- 151
+ + NL L+ L L SN IP + L+NL L + N + + +
Sbjct: 68 V-SAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIV-ILLDYMF 124
Query: 152 GHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPS-SIGNLSNLVYLFL 210
L +LK+L + N L + L+SL L L +L SIP+ ++ +L L+ L L
Sbjct: 125 QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL-TSIPTEALSHLHGLIVLRL 183
Query: 211 KKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSS 270
+ ++ SF L +L LE+S+ ++ LT LS++ L +
Sbjct: 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA 243
Query: 271 LSNLSSLEILHLYDNQLSGHIPQEI-GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFS 329
+ +L L L+L N +S I + + L + + G Q P L+ +
Sbjct: 244 VRHLVYLRFLNLSYNPIS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLN 302
Query: 330 VHDNYFIGSLPK-TLRNCTSLERVRLEKNQLI 360
V N + +L + + +LE + L+ N L
Sbjct: 303 VSGNQ-LTTLEESVFHSVGNLETLILDSNPLA 333
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 6e-37
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 35/275 (12%)
Query: 697 IGRGGYGSVYKAELPSGDT-VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IGRG +G V+ L + +T VAVK + +FL E + L H NIV+ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL-KAKFLQEARILKQYSHPNIVRLIGV 180
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
C+ + ++V E ++ G L +E + + ++ A + Y+ + +H
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESK---CCIH 236
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG------TYGYVAPELAYTMKV 869
RD++++N L+ + +SDFG ++ S T APE +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT----APEALNYGRY 292
Query: 870 TEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDH-MFDARLPPPWLEV 927
+ + DV+SFG+L E G P P + + + RLP P
Sbjct: 293 SSESDVWSFGILLWETFSLGASP-----------YPNLSNQQTREFVEKGGRLPCP---E 338
Query: 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
D + ++ C P +RP+ + + L
Sbjct: 339 LCPDAVFRLM---EQCWAYEPGQRPSFSTIYQELQ 370
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 5e-36
Identities = 70/315 (22%), Positives = 113/315 (35%), Gaps = 34/315 (10%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGL-LTN 133
L++ P L + LDL N++ NL L L L +N S KI L
Sbjct: 43 LEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS-KISPGAFAPLVK 101
Query: 134 LEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNSLP 192
LE L++ N L +PE +L+ L + N + + S+ L+ ++ + L N L
Sbjct: 102 LERLYLSKNQLK-ELPE-KMPKTLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLK 158
Query: 193 GSI--PSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GN 249
S + + L Y+ + ++ IP G LT+L L N+++ +
Sbjct: 159 SSGIENGAFQGMKKLSYIRIADTNITT-IPQ--GLPPSLTELHLDGNKIT-KVDAASLKG 214
Query: 250 LKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGN 309
L L L LS N + SL+N L LHL +N+L +P + + + + + N
Sbjct: 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNN 273
Query: 310 QFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQL-IGNISDD-F 367
+ + C G S V L N + I F
Sbjct: 274 NISAIGSNDFCPPGYNT------------------KKASYSGVSLFSNPVQYWEIQPSTF 315
Query: 368 GIYPNLKLFDLSYNK 382
L K
Sbjct: 316 RCVYVRAAVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-32
Identities = 64/329 (19%), Positives = 120/329 (36%), Gaps = 49/329 (14%)
Query: 48 CTWSGISCNHAG-----RIISINLTSTSLKG----TLDQFPFSLFSHLSYLDLNENQLYG 98
C + C+ G + + + L+ + F +L L L N++
Sbjct: 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 90
Query: 99 NIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSS 156
P L KL+ L LS N ++P + L+ L + N + + + L+
Sbjct: 91 ISPGAFAPLVKLERLYLSKNQLK-ELPE--KMPKTLQELRVHENEIT-KVRKSVFNGLNQ 146
Query: 157 LKNLALDGNHL-DGPIPVSI-GNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNH 214
+ + L N L I + L + + + ++ +IP G +L L L N
Sbjct: 147 MIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI-TTIPQ--GLPPSLTELHLDGNK 203
Query: 215 LRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNL 274
+ +S L L KL LS N +S + N L +L L+ N+L VP L++
Sbjct: 204 ITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADH 262
Query: 275 SSLEILHLYDNQLSG------HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYF 328
+++++L++N +S P + + +S+ N +QY+
Sbjct: 263 KYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNP--------------VQYW 308
Query: 329 SVHDNYFIGSLPKTLRNCTSLERVRLEKN 357
+ + F R V+L
Sbjct: 309 EIQPSTF--------RCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 2e-31
Identities = 74/332 (22%), Positives = 114/332 (34%), Gaps = 67/332 (20%)
Query: 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
L+L NN+++ + NLK L L L N++ P + + L LE L+L NQL
Sbjct: 54 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 113
Query: 289 GHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK-TLRNCT 347
+P+++ L L V N+ I + K
Sbjct: 114 -ELPEKM--PKTLQELRVHENE-------------------------ITKVRKSVFNGLN 145
Query: 348 SLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNI 407
+ V L N LK + F G +L ++IA NI
Sbjct: 146 QMIVVELGTNP--------------LKSSGIENGAFQG--------MKKLSYIRIADTNI 183
Query: 408 TGGIPPEIGNATQLHELDFSSNHLVGKVPLE-LANLTSLNDLILNGNQLSGGIPPE-LGL 465
T IP G L EL N + KV L L +L L L+ N +S + L
Sbjct: 184 T-TIPQ--GLPPSLTELHLDGNKI-TKVDAASLKGLNNLAKLGLSFNSIS-AVDNGSLAN 238
Query: 466 LTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ------EIPIQLGKLVQLSE 519
L L L+ N+ +PG + + + + +N S P K S
Sbjct: 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSG 297
Query: 520 LDLSHNLLR-GEIPPEI-CNLESLEKLNLSHN 549
+ L N ++ EI P + + L +
Sbjct: 298 VSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-31
Identities = 69/334 (20%), Positives = 120/334 (35%), Gaps = 46/334 (13%)
Query: 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHL 215
L+ + L+ +P + L L NN + NL NL L L N +
Sbjct: 32 HLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 88
Query: 216 RGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLS 275
P +F L KL +L LS NQL +P+++ K L +L + +N++ S + L+
Sbjct: 89 SKISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLN 145
Query: 276 SLEILHLYDNQL-SGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNY 334
+ ++ L N L S I G F + L Y + D
Sbjct: 146 QMIVVELGTNPLKSSGIEN--GAFQGMK---------------------KLSYIRIADT- 181
Query: 335 FIGSLPKTLRNCTSLERVRLEKNQLIGNISDD-FGIYPNLKLFDLSYNKFYGELSSN-WW 392
I ++P+ L SL + L+ N+ I + NL LS+N + +
Sbjct: 182 NITTIPQGL--PPSLTELHLDGNK-ITKVDAASLKGLNNLAKLGLSFNSI-SAVDNGSLA 237
Query: 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHL------VGKVPLELANLTSLN 446
N P L L + N + +P + + + + +N++ P S +
Sbjct: 238 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYS 296
Query: 447 DLILNGNQLS-GGIPPEL-GLLTDLGYLDLSANR 478
+ L N + I P + + L +
Sbjct: 297 GVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-25
Identities = 62/355 (17%), Positives = 115/355 (32%), Gaps = 90/355 (25%)
Query: 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
L ++ S+ L +P+++ L L N++ NL +L L L +N++S
Sbjct: 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS 89
Query: 289 GHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTS 348
I P
Sbjct: 90 -KIS-----------------------------------------------PGAFAPLVK 101
Query: 349 LERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT 408
LER+ L KNQL + L+ + N+ S + Q+ ++++ N +
Sbjct: 102 LERLYLSKNQLK---ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLK 158
Query: 409 -GGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLT 467
GI + L+ + + ++ IP GL
Sbjct: 159 SSGIENGA-----------------------FQGMKKLSYIRIADTNITT-IPQ--GLPP 192
Query: 468 DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLL 527
L L L N+ +K ++ L L L +S N S L L EL L++N L
Sbjct: 193 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 252
Query: 528 RGEIPPEICNLESLEKLNLSHNNLSGSIPTN-------FENMHGLLSIDISYNEL 575
++P + + + ++ + L +NN+S +I +N + + N +
Sbjct: 253 V-KVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPV 305
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 4e-12
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 444 SLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEF 503
L + + L +P L D LDL N+ ++ G+ L LH L + +N+
Sbjct: 32 HLRVVQCSDLGLEK-VPK--DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 88
Query: 504 SQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-FENM 562
S+ P LV+L L LS N L+ E+P ++ ++L++L + N ++ + + F +
Sbjct: 89 SKISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGL 144
Query: 563 HGLLSIDISYNEL-DGPIPSIEAFRHAP 589
+ ++ +++ N L I + AF+
Sbjct: 145 NQMIVVELGTNPLKSSGIEN-GAFQGMK 171
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 1e-34
Identities = 85/424 (20%), Positives = 145/424 (34%), Gaps = 55/424 (12%)
Query: 170 PIPVSIGNLSSLVGLYLYNN--SLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLR 227
I + I N SL YN S+ +N + +
Sbjct: 2 SIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECL--IN 59
Query: 228 KLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQL 287
+ ++L+L+ LS S+P + +T L ++QN L ++P ++L E L DN+L
Sbjct: 60 QFSELQLNRLNLS-SLPDNLP--PQITVLEITQNALI-SLPELPASL---EYLDACDNRL 112
Query: 288 SGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCT 347
S +P+ + L L V NQ T LP+ L+Y + +N + LP+ T
Sbjct: 113 S-TLPELPAS---LKHLDVDNNQLT-MLPELP---ALLEYINADNN-QLTMLPELP---T 160
Query: 348 SLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQL----GILKIA 403
SLE + + NQL + + +L+ D+S N L + +
Sbjct: 161 SLEVLSVRNNQL-TFLPELPE---SLEALDVSTNLL-ESLPAVPVRNHHSEETEIFFRCR 215
Query: 404 GNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS---GGIP 460
N IT IP I + + N L ++ L+ T+ D S G
Sbjct: 216 ENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQN 274
Query: 461 PELGLLTDLGYLDLSANRFS---------KSIPGNMGYLLKLHYLNMSSN-----EFSQE 506
L D N+ S + + L L+ + + F ++
Sbjct: 275 TLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGFREQ 334
Query: 507 IPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS-----HNNLSGSIPTNFEN 561
+ L KL +EL + + + +L NL H G +
Sbjct: 335 VAAWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGA 394
Query: 562 MHGL 565
+ L
Sbjct: 395 LLSL 398
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 2e-33
Identities = 75/430 (17%), Positives = 141/430 (32%), Gaps = 44/430 (10%)
Query: 100 IPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNG--SIPEIGHLSSL 157
I PI N L N N SG E + + N S+ + ++
Sbjct: 3 IMLPINNNFSLS-QNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECLINQF 61
Query: 158 KNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG 217
L L+ +L +P ++ + L + N+L S+P +L L N L
Sbjct: 62 SELQLNRLNLSS-LPDNLP--PQITVLEITQNAL-ISLPELPASLEYLD---ACDNRLST 114
Query: 218 PIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSL 277
+P L L++ NNQL+ +P+ L+ ++ NQL +P ++ L
Sbjct: 115 -LPELPA---SLKHLDVDNNQLT-MLPELPALLE---YINADNNQLT-MLPELPTS---L 162
Query: 278 EILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQ----YFSVHDN 333
E+L + +NQL+ +P+ +L +L V N LP ++ + +F +N
Sbjct: 163 EVLSVRNNQLT-FLPELPE---SLEALDVSTNLLES-LPAVPVRNHHSEETEIFFRCREN 217
Query: 334 YFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWN 393
I +P+ + + + LE N L I + + F
Sbjct: 218 R-ITHIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTL 276
Query: 394 CPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGN 453
L ++ E + +N L++ S +
Sbjct: 277 HRPLADAVT--AWFPENKQSDVSQIWHAFEHEEHANTFS-AFLDRLSDTVSARNTSGFRE 333
Query: 454 QLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEI-----P 508
Q++ L L+ L + + + + L + N+ +
Sbjct: 334 QVAA----WLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQASEGLFD 389
Query: 509 IQLGKLVQLS 518
G L+ L
Sbjct: 390 NDTGALLSLG 399
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-33
Identities = 51/238 (21%), Positives = 89/238 (37%), Gaps = 28/238 (11%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
L + S L LN L ++P + ++ L ++ N +P L L+
Sbjct: 54 KECLINQFSELQLNRLNL-SSLPDNLP--PQITVLEITQNALI-SLPELPASLEYLDACD 109
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS 198
N L+ ++PE +SLK+L +D N L +P L + NN L +P
Sbjct: 110 ---NRLS-TLPE--LPASLKHLDVDNNQLTM-LPELPALLEY---INADNNQL-TMLPEL 158
Query: 199 IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNL----KLLT 254
+L L ++ N L +P L L++S N L S+P +
Sbjct: 159 PTSLE---VLSVRNNQLTF-LPEL---PESLEALDVSTNLLE-SLPAVPVRNHHSEETEI 210
Query: 255 DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312
+N++ +P ++ +L + L DN LS I + + F+
Sbjct: 211 FFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFS 267
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-26
Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 37/262 (14%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKL-----------------KFLNLSS 117
L P +L ++ L++ +N L ++P +L L K L++ +
Sbjct: 71 LSSLPDNLPPQITVLEITQNAL-ISLPELPASLEYLDACDNRLSTLPELPASLKHLDVDN 129
Query: 118 NHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGN 177
N + +P LL + + N L +PE+ +SL+ L++ N L +P +
Sbjct: 130 NQLT-MLPELPALLEYINADN---NQLT-MLPEL--PTSLEVLSVRNNQL-TFLPELPES 181
Query: 178 LSSLVGLYLYNNSLPGSIPSSIGNLSNL----VYLFLKKNHLRGPIPSSFGYLRKLTKLE 233
L +L + N L S+P+ + ++ ++N + IP + L +
Sbjct: 182 LEAL---DVSTNLL-ESLPAVPVRNHHSEETEIFFRCRENRITH-IPENILSLDPTCTII 236
Query: 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQ 293
L +N LS I + + D + ++ N + +
Sbjct: 237 LEDNPLSSRIRESLSQQTAQPDYHGPRIYF--SMSDGQQNTLHRPLADAVTAWFPENKQS 294
Query: 294 EIGNFMNLNSLSVGGNQFTGFL 315
++ + N F+ FL
Sbjct: 295 DVSQIWHAFEHEEHANTFSAFL 316
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 110 bits (275), Expect = 5e-25
Identities = 59/362 (16%), Positives = 101/362 (27%), Gaps = 84/362 (23%)
Query: 242 SIPQEIGNLKLLTDLSLSQNQLRGT---VPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF 298
SI I N L+ N + GT S+ + N+ + +
Sbjct: 2 SIMLPINNNFSLSQN-SFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKE--CLI 58
Query: 299 MNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQ 358
+ L + + LP N+ + + N + SLP+ + L
Sbjct: 59 NQFSELQLNRLNLS-SLPDNLPPQ--ITVLEITQNA-LISLPELPASLEYL--------- 105
Query: 359 LIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNA 418
D N+ LS+ +P +
Sbjct: 106 ------------------DACDNR----LST---------------------LPELPAS- 121
Query: 419 TQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANR 478
L LD +N L +P A L +N + NQL+ +P L L + N+
Sbjct: 122 --LKHLDVDNNQLT-MLPELPALLEYIN---ADNNQLTM-LPELPTSLE---VLSVRNNQ 171
Query: 479 FSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSE----LDLSHNLLRGEIPPE 534
+ +P L L++S+N +P + E N + IP
Sbjct: 172 LT-FLPELPE---SLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPEN 225
Query: 535 ICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQ 594
I +L+ + L N LS S + + H P+
Sbjct: 226 ILSLDPTCTIILEDNPLS-SRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAV 284
Query: 595 GN 596
Sbjct: 285 TA 286
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 1e-34
Identities = 56/261 (21%), Positives = 104/261 (39%), Gaps = 26/261 (9%)
Query: 697 IGRGGYGSVYKAELPSGD-TVAVKKLHS-FTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+GRGG G VY+AE + VA+K + + + + E + ++ ++V +
Sbjct: 42 VGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHD 101
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
F ++ + LA +L + + + V +++ + AL H
Sbjct: 102 FGEIDGQLYVDMRLINGVDLAAMLRRQGP--LAPPRAVAIVRQIGSALDAAH---AAGAT 156
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA---GTYGYVAPELAYTMKVTE 871
HRDV +N+L+ + A++ DFG A ++L GT Y+APE T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT--TDEKLTQLGNTVGTLYYMAPERFSESHATY 214
Query: 872 KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931
+ D+Y+ + E + G P G ++ H+ A P + G+
Sbjct: 215 RADIYALTCVLYECLTGSPP-----------YQGDQLSVMGAHINQAIPRPSTVRPGIPV 263
Query: 932 KLKSIIEVALSCVDANPERRP 952
++I ++ NPE R
Sbjct: 264 AFDAVIARGMA---KNPEDRY 281
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 2e-34
Identities = 53/270 (19%), Positives = 113/270 (41%), Gaps = 22/270 (8%)
Query: 686 RSINNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEF-LSEIKALTG 743
+S+ + IG G +G + G +K++ + + ++ ++E E+ L
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKEREESRREVAVLAN 79
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALS 803
++H NIV++ ++V +Y E G L + ++++ + ++ + AL
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL 863
++H I+HRD+ S+N+ L + + DFG A++L GT Y++PE+
Sbjct: 140 HVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI 196
Query: 864 AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
K D+++ G + E+ +H + +M + + PP
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFE-----------AGSMKNLVLKIISGSFPP- 244
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPN 953
+ + L+S++ NP RP+
Sbjct: 245 -VSLHYSYDLRSLVS---QLFKRNPRDRPS 270
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 2e-34
Identities = 72/301 (23%), Positives = 116/301 (38%), Gaps = 55/301 (18%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV 744
R ++F+E +G+G +G V KA A+KK+ + LSE+ L +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK---LSTILSEVMLLASL 59
Query: 745 RHRNIVKFYGFCSHARHS-------------FLVYEYLERGSLA-RILSSETATEMDWSK 790
H+ +V++Y R+ F+ EY E G+L I S + D
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 791 RVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850
R + + + ALSY+H + I+HRD+ N+ +D + DFG AK +
Sbjct: 120 R--LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 851 ELA--------------GTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLL 895
+ GT YVA E L T EK D+YS G++ E ++
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE---------MI 225
Query: 896 SSLSDSSLPGANMNEAIDHMFDARL-PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM 954
S G + + + PP + K II +D +P +RP
Sbjct: 226 YPFS----TGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIR---LLIDHDPNKRPGA 278
Query: 955 Q 955
+
Sbjct: 279 R 279
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 3e-34
Identities = 72/295 (24%), Positives = 110/295 (37%), Gaps = 19/295 (6%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTN 133
L P + + LDL N + L L L L +N S KI + L
Sbjct: 45 LKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS-KIHEKAFSPLRK 103
Query: 134 LEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLP- 192
L+ L++ NHL IP SSL L + N + L ++ + + N L
Sbjct: 104 LQKLYISKNHLV-EIPP-NLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN 161
Query: 193 GSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLK 251
+ L YL + + L G IP L +L L +N++ +I E
Sbjct: 162 SGFEPGAFDGLKLNYLRISEAKLTG-IPK--DLPETLNELHLDHNKIQ-AIELEDLLRYS 217
Query: 252 LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQF 311
L L L NQ+R SLS L +L LHL +N+LS +P + + L + + N
Sbjct: 218 KLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNI 276
Query: 312 TGFLPQNICQSG------SLQYFSVHDNY--FIGSLPKTLRNCTSLERVRLEKNQ 358
T + C G S+ +N + P T R T ++ +
Sbjct: 277 TKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-30
Identities = 60/334 (17%), Positives = 108/334 (32%), Gaps = 47/334 (14%)
Query: 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHL 215
L+ + L +P I L L NN + L +L L L N +
Sbjct: 34 HLRVVQCSDLGLKA-VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI 90
Query: 216 RGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLS 275
+F LRKL KL +S N L IP + L +L + N++R S L
Sbjct: 91 SKIHEKAFSPLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRIRKVPKGVFSGLR 147
Query: 276 SLEILHLYDNQL-SGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNY 334
++ + + N L + + + LN L + + T + +
Sbjct: 148 NMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT----------------GIPKDL 191
Query: 335 FIGSLPKTLRNCTSLERVRLEKNQLIGNISD-DFGIYPNLKLFDLSYNKFYGELSSN-WW 392
+L + L+ N+ I I D Y L L +N+ + +
Sbjct: 192 P-----------ETLNELHLDHNK-IQAIELEDLLRYSKLYRLGLGHNQI-RMIENGSLS 238
Query: 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHL------VGKVPLELANLTSLN 446
P L L + N ++ +P + + L + +N++ N
Sbjct: 239 FLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYN 297
Query: 447 DLILNGNQLS-GGIPPELGL-LTDLGYLDLSANR 478
+ L N + + P +TD + +
Sbjct: 298 GISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-27
Identities = 63/333 (18%), Positives = 110/333 (33%), Gaps = 70/333 (21%)
Query: 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
T L+L NN +S + L+ L L L N++ + S L L+ L++ N L
Sbjct: 56 TTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV 115
Query: 289 GHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK-TLRNCT 347
IP + +L L + N+ I +PK
Sbjct: 116 -EIPPNL--PSSLVELRIHDNR-------------------------IRKVPKGVFSGLR 147
Query: 348 SLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNI 407
++ + + N L ++ +L L+I+ +
Sbjct: 148 NMNCIEMGGNPL-----------------------ENSGFEPGAFDGLKLNYLRISEAKL 184
Query: 408 TGGIPPEIGNATQLHELDFSSNHLVGKVPLE-LANLTSLNDLILNGNQLSGGIPPE-LGL 465
T GIP L+EL N + + LE L + L L L NQ+ I L
Sbjct: 185 T-GIPK--DLPETLNELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIR-MIENGSLSF 239
Query: 466 LTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIP-------IQLGKLVQLS 518
L L L L N+ S +P + L L + + +N + ++ K +
Sbjct: 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYN 297
Query: 519 ELDLSHNLLR-GEIPPEI-CNLESLEKLNLSHN 549
+ L +N + E+ P + + +
Sbjct: 298 GISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 2e-22
Identities = 67/370 (18%), Positives = 116/370 (31%), Gaps = 93/370 (25%)
Query: 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
L ++ S+ L ++P+EI T L L N + L L L L +N++S
Sbjct: 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS 91
Query: 289 GHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTS 348
I K
Sbjct: 92 -KIH-----------------------------------------------EKAFSPLRK 103
Query: 349 LERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT 408
L+++ + KN L+ I + +L + N+ + + +++ GN +
Sbjct: 104 LQKLYISKNHLV-EIPP--NLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE 160
Query: 409 -GGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE-LGLL 466
G P + +L+ L S L +P +L +LN+L L+ N++ I E L
Sbjct: 161 NSGFEPGAFDGLKLNYLRISEAKLT-GIPKDL--PETLNELHLDHNKIQA-IELEDLLRY 216
Query: 467 TDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNL 526
+ L L L N+ I L L L EL L +N
Sbjct: 217 SKLYRLGLGHNQIR-MIENGS-----------------------LSFLPTLRELHLDNNK 252
Query: 527 LRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-------FENMHGLLSIDISYNELDGPI 579
L +P + +L+ L+ + L NN++ + N I + N +
Sbjct: 253 LS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWE 310
Query: 580 PSIEAFRHAP 589
FR
Sbjct: 311 VQPATFRCVT 320
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 1e-11
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 10/146 (6%)
Query: 444 SLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEF 503
L + + L +P + D LDL N S+ + L L+ L + +N+
Sbjct: 34 HLRVVQCSDLGLKA-VPK--EISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI 90
Query: 504 SQEIPIQ-LGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-FEN 561
S +I + L +L +L +S N L EIPP + SL +L + N + +P F
Sbjct: 91 S-KIHEKAFSPLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRIR-KVPKGVFSG 145
Query: 562 MHGLLSIDISYNELDGPIPSIEAFRH 587
+ + I++ N L+ AF
Sbjct: 146 LRNMNCIEMGGNPLENSGFEPGAFDG 171
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 6e-34
Identities = 59/265 (22%), Positives = 105/265 (39%), Gaps = 46/265 (17%)
Query: 696 CIGRGGYGSVYKAE---LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
CI GG G +Y A + +G V +K L +G+ Q ++E + L V H +IV+
Sbjct: 87 CIAHGGLGWIYLALDRNV-NGRPVVLKGLVH-SGDAEAQAMAMAERQFLAEVVHPSIVQI 144
Query: 753 YGFCSHARHS-----FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
+ F H ++V EY+ SL R ++ ++ + + + ALSY+H
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK----GQKLPVAEAIAYLLEILPALSYLH- 199
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
+V+ D+ +N++L E + + D G + L GT G+ APE+ T
Sbjct: 200 --SIGLVYNDLKPENIMLT-EEQLKLIDLGAVSRINSFGY----LYGTPGFQAPEIVRT- 251
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
T D+Y+ G + ++ +D LP +
Sbjct: 252 GPTVATDIYTVGRTLAALTLDLPTRN---------------GRYVDG-----LPEDDPVL 291
Query: 928 GVEDKLKSIIEVALSCVDANPERRP 952
D ++ A+ D +P +R
Sbjct: 292 KTYDSYGRLLRRAI---DPDPRQRF 313
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 1e-33
Identities = 58/287 (20%), Positives = 118/287 (41%), Gaps = 48/287 (16%)
Query: 686 RSINNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV 744
R +F E IG GG+G V+KA+ G T +K++ + ++ E+KAL +
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK------YNNEKAEREVKALAKL 61
Query: 745 RHRNIVKFYGF----------------CSHARHSFLVYEYLERGSLARILSSETATEMDW 788
H NIV + G S + F+ E+ ++G+L + + ++D
Sbjct: 62 DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 789 SKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848
+ + + + + Y+H + +++RD+ N+ L + + DFG LK D
Sbjct: 122 VLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANM 908
+ GT Y++PE + ++ D+Y+ G++ E++
Sbjct: 179 -TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD-------------TAFET 224
Query: 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
++ + D + + + K K++++ + PE RPN
Sbjct: 225 SKFFTDLRDGIISDIF-----DKKEKTLLQ---KLLSKKPEDRPNTS 263
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 2e-33
Identities = 54/296 (18%), Positives = 118/296 (39%), Gaps = 48/296 (16%)
Query: 686 RSINNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV 744
R + +F+ C+GRGG+G V++A+ A+K++ +++ + E+KAL +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKL 60
Query: 745 RHRNIVKFYGFC------------SHARHSFLVYEYLERGSLARILSS-ETATEMDWSKR 791
H IV+++ S + ++ + + +L ++ T E + S
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 792 VNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK-------- 843
+++ +A A+ ++H + ++HRD+ N+ + V DFG +
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 844 ----PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899
P + + GT Y++PE + + K D++S G++ E LL S
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE---------LLYPFS 228
Query: 900 DSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ + + + PP + + +++ + +P RP
Sbjct: 229 TQM----ERVRTLTDVRNLKFPPLFTQKY--PCEYVMVQ---DMLSPSPMERPEAI 275
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 7e-33
Identities = 67/267 (25%), Positives = 107/267 (40%), Gaps = 25/267 (9%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFL-SEIKALTGVRHRNIVKFYG 754
IG G YG K G + K+L + T +K+ L SE+ L ++H NIV++Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 755 --FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYMHHECR 810
++V EY E G LA +++ T + V+ + AL H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 811 PP--IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMK 868
++HRD+ NV LD + + DFG A++L D+S GT Y++PE M
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMS 192
Query: 869 VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928
EK D++S G L E+ P + E + + +
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFT-----------AFSQKELAGKIREGKFRRIPYRYS 241
Query: 929 VEDKLKSIIEVALSCVDANPERRPNMQ 955
E L II ++ RP+++
Sbjct: 242 DE--LNEIIT---RMLNLKDYHRPSVE 263
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 1e-32
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 32/272 (11%)
Query: 696 CIGRGGYGSVYKAELPSGDT-VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G G YG VY+ VAVK L +T +EFL E + ++H N+V+ G
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
C+ +++ E++ G+L L E+ + + ++ A+ Y+ + +
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 340
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD---SSNWSELAGTYGYVAPELAYTMKVTE 871
HR+++++N L+ + V+DFG ++L+ D + ++ + APE K +
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFSI 398
Query: 872 KCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGV 929
K DV++FGVL E+ G P PG ++++ + + R+ P
Sbjct: 399 KSDVWAFGVLLWEIATYGMSP-----------YPGIDLSQVYELLEKDYRMERP------ 441
Query: 930 EDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
E + + E+ +C NP RP+ +I
Sbjct: 442 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 473
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-32
Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 46/278 (16%)
Query: 697 IGRGGYGSVYKAELPSGDT-VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G YG VY+ VAVK L +T +EFL E + ++H N+V+ G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
C+ +++ E++ G+L L E+ + + ++ A+ Y+ + +H
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPD----SSN------WSELAGTYGYVAPELAY 865
RD++++N L+ + V+DFG ++L+ D + W+ APE
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APESLA 185
Query: 866 TMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPP 923
K + K DV++FGVL E+ G P PG ++++ + + R+ P
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP-----------YPGIDLSQVYELLEKDYRMERP 234
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
E + + E+ +C NP RP+ +I
Sbjct: 235 ------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-32
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 30/264 (11%)
Query: 697 IGRGGYGSVYKAELPSGDT-----VAVKKLHS-FTGETTHQKEFLSEIKALTGVRHRNIV 750
+G GG +VY AE DT VA+K + + K F E+ + + H+NIV
Sbjct: 19 LGGGGMSTVYLAE----DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+LV EY+E +L+ + S + +N + + + H
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILDGIKHAH---D 129
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS-SNWSELAGTYGYVAPELAYTMKV 869
IVHRD+ +N+L+D + DFG AK L S + + + GT Y +PE A
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEAT 189
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP-WLEVG 928
E D+YS G++ E++ G+ P + +++ ++ AI H+ D+ +
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFN-----GETA-----VSIAIKHIQDSVPNVTTDVRKD 239
Query: 929 VEDKLKSIIEVALSCVDANPERRP 952
+ L ++I A + R
Sbjct: 240 IPQSLSNVILRATE---KDKANRY 260
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 3e-32
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 697 IGRGGYGSVYKAELPSGDT-----VAVKKLHS-FTGETTHQKEFLSEIKALTGVRHRNIV 750
+G GG V+ A D VAVK L + + + F E + + H IV
Sbjct: 20 LGFGGMSEVHLAR----DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 751 KFY--GF--CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH 806
Y G ++V EY++ +L I+ +E M + + VI AL++ H
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSH 133
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW---SELAGTYGYVAPEL 863
+ I+HRDV N+++ V DFG A+ + ++ + + GT Y++PE
Sbjct: 134 ---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 864 AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
A V + DVYS G + EV+ G+ P DS ++ A H+ + +PP
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT-----GDSP-----VSVAYQHVREDPIPPS 240
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRP 952
G+ L +++ AL+ NPE R
Sbjct: 241 ARHEGLSADLDAVVLKALA---KNPENRY 266
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 3e-32
Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 44/274 (16%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG+G +G V + G+ VAVK + + FL+E +T +RH N+V+ G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 757 SHARHS-FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+ ++V EY+ +GSL L S + + + V A+ Y+ VH
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 140
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN------WSELAGTYGYVAPELAYTMKV 869
RD++++NVL+ + A VSDFG K W+ APE K
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------APEALREKKF 191
Query: 870 TEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEV 927
+ K DV+SFG+L E+ G+ P P + + + + ++ P
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVP-----------YPRIPLKDVVPRVEKGYKMDAP---- 236
Query: 928 GVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ ++ EV +C + RP+ +Q+ +L
Sbjct: 237 --DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 268
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 4e-32
Identities = 67/275 (24%), Positives = 113/275 (41%), Gaps = 44/275 (16%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG+G +G V + G+ VAVK + + FL+E +T +RH N+V+ G
Sbjct: 200 TIGKGEFGDVMLGDY-RGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLVQLLGV 254
Query: 756 CSHARHSF-LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+ +V EY+ +GSL L S + + + V A+ Y+ V
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 311
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN------WSELAGTYGYVAPELAYTMK 868
HRD++++NVL+ + A VSDFG K W+ APE K
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------APEALREKK 362
Query: 869 VTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLE 926
+ K DV+SFG+L E+ G+ P P + + + + ++ P
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGRVP-----------YPRIPLKDVVPRVEKGYKMDAP--- 408
Query: 927 VGVEDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
+ ++ +V +C + RP Q+ +L
Sbjct: 409 ---DGCPPAVYDVMKNCWHLDAATRPTFLQLREQL 440
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 4e-32
Identities = 62/280 (22%), Positives = 115/280 (41%), Gaps = 52/280 (18%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG G +G V+ + D VA+K + +++F+ E + + + H +V+ YG C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY---MHHECRPPI 813
LV E++E G L+ L ++ + + V ++Y +
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC------V 125
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD----SSN------WSELAGTYGYVAPEL 863
+HRD++++N L+ VSDFG + + D S+ W+ +PE+
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA---------SPEV 176
Query: 864 AYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLP 921
+ + K DV+SFGVL EV +G+ P + +E ++ + RL
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP-----------YENRSNSEVVEDISTGFRLY 225
Query: 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
P + ++ C PE RP +++ +L
Sbjct: 226 KP------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 4e-32
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 28/269 (10%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G +G V+ VA+K L T + FL E + + +RH +V+ Y
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
S ++V EY+ +GSL L ET + + V++ +A ++Y+ VH
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 303
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKCD 874
RD+ + N+L+ V+DFG A+L++ + + A + APE A + T K D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 875 VYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDK 932
V+SFG+L E+ KG+ P PG E +D + R+P P +
Sbjct: 364 VWSFGILLTELTTKGRVP-----------YPGMVNREVLDQVERGYRMPCP------PEC 406
Query: 933 LKSIIEVALSCVDANPERRPNM-QIVCKL 960
+S+ ++ C PE RP + L
Sbjct: 407 PESLHDLMCQCWRKEPEERPTFEYLQAFL 435
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 8e-32
Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 20/279 (7%)
Query: 686 RSINNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFL-SEIKALTG 743
++ NF IGRG + VY+A L G VA+KK+ F + EI L
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHA 801
+ H N++K+Y +V E + G L+R++ + +R + A
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAP 861
L +MH ++HRD+ NV + + D G + ++ L GT Y++P
Sbjct: 149 LEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 862 ELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921
E + K D++S G L E+ Q P N+ +
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSP---------FYGDKMNLYSLCKKIEQCD-Y 255
Query: 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKL 960
PP ++L+ ++ C++ +PE+RP++ V +
Sbjct: 256 PPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYVYDV 291
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 8e-32
Identities = 60/287 (20%), Positives = 112/287 (39%), Gaps = 45/287 (15%)
Query: 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLS----EIKALTGV- 744
+F +G G G++ + VAVK++ E S E++ L
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI---------LPECFSFADREVQLLRESD 75
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY 804
H N+++++ + ++ E +L + + + + + +++ L++
Sbjct: 76 EHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLG-LEPITLLQQTTSGLAH 133
Query: 805 MHHECRPPIVHRDVSSKNVLL-----DFEYEAHVSDFGTAKLLKPDSS---NWSELAGTY 856
+H IVHRD+ N+L+ + +A +SDFG K L S + GT
Sbjct: 134 LHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 857 GYVAPEL---AYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAI 912
G++APE+ T D++S G + VI +G HP S AN+
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP------FGKSLQRQANILLGA 244
Query: 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
P V + +IE + +P++RP+ + V K
Sbjct: 245 ---CSLDCLHPEKHEDVI--ARELIE---KMIAMDPQKRPSAKHVLK 283
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 9e-32
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 32/284 (11%)
Query: 697 IGRGGYGSVYKAEL-PSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G V P GD VAVK L +G H + EI+ L + H NIVK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN-HIADLKKEIEILRNLYHENIVK 87
Query: 752 FYGFCSHARHS--FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ G C+ + L+ E+L GSL L +++ +++ + + Y+
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYL-GSR 145
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT------YGYVAPEL 863
+ VHRD++++NVL++ E++ + DFG K ++ D ++ Y APE
Sbjct: 146 Q--YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWY---APEC 200
Query: 864 AYTMKVTEKCDVYSFGVLALEVI----KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA- 918
K DV+SFGV E++ P L + + + ++ + +
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260
Query: 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
RLP P + + ++ C + P R + Q + +
Sbjct: 261 RLPCP------PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 1e-31
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 28/260 (10%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
IG+G +G V+K + + VA+K + ++ EI L+ + K+YG
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+++ EYL GS +L E + +++ + L Y+H E +
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA---TILREILKGLDYLHSE---KKI 141
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCD 874
HRD+ + NVLL E ++DFG A L + GT ++APE+ K D
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 201
Query: 875 VYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN--EAIDHMFDARLPPPWLEVGVEDK 932
++S G+ A+E+ +G P P + ++ + + + + PP LE
Sbjct: 202 IWSLGITAIELARG-EP------------PHSELHPMKVLFLI--PKNNPPTLEGNYSKP 246
Query: 933 LKSIIEVALSCVDANPERRP 952
LK +E C++ P RP
Sbjct: 247 LKEFVEA---CLNKEPSFRP 263
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-31
Identities = 62/271 (22%), Positives = 120/271 (44%), Gaps = 32/271 (11%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G +G V+ A VAVK + + + FL+E + ++H +VK +
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKP---GSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+ +++ E++ +GSL L S+ ++ K ++ +A ++++ +H
Sbjct: 252 VTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIH 307
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV---APELAYTMKVTEK 872
RD+ + N+L+ ++DFG A++++ + ++ G + APE T K
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNE--YTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 873 CDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVE 930
DV+SFG+L +E++ G+ P PG + E I + R+P P E
Sbjct: 366 SDVWSFGILLMEIVTYGRIP-----------YPGMSNPEVIRALERGYRMPRP------E 408
Query: 931 DKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ + + + + C PE RP I L
Sbjct: 409 NCPEELYNIMMRCWKNRPEERPTFEYIQSVL 439
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 2e-31
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 28/269 (10%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G +G V+ VA+K L T + FL E + + +RH +V+ Y
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
S ++V EY+ +GSL L ET + + V++ +A ++Y+ VH
Sbjct: 331 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 386
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG-TYGYVAPELAYTMKVTEKCD 874
RD+ + N+L+ V+DFG A+L++ + + A + APE A + T K D
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 875 VYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDK 932
V+SFG+L E+ KG+ P PG E +D + R+P P +
Sbjct: 447 VWSFGILLTELTTKGRVP-----------YPGMVNREVLDQVERGYRMPCP------PEC 489
Query: 933 LKSIIEVALSCVDANPERRPNM-QIVCKL 960
+S+ ++ C PE RP + L
Sbjct: 490 PESLHDLMCQCWRKEPEERPTFEYLQAFL 518
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 2e-31
Identities = 69/279 (24%), Positives = 111/279 (39%), Gaps = 44/279 (15%)
Query: 697 IGRGGYGSVYKAELPSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
+G G +G+V K TVAVK L + + + E L+E + + + IV+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY---MHHECR 810
G C LV E E G L + L + + ++ V+ + Y +
Sbjct: 85 GICEAESW-MLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN---- 137
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT------YGYVAPELA 864
VHRD++++NVLL ++ A +SDFG +K L+ D + + Y APE
Sbjct: 138 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECI 192
Query: 865 YTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPP 922
K + K DV+SFGVL E GQ P G +E + R+
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKP-----------YRGMKGSEVTAMLEKGERMGC 241
Query: 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
P + + ++ C + E RP + +L
Sbjct: 242 P------AGCPREMYDLMNLCWTYDVENRPGFAAVELRL 274
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 4e-31
Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 46/277 (16%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V + VAVK + + + EF E + + + H +VKFYG C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE---GSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
S ++V EY+ G L L S ++ S+ + + V ++++ +HR
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHR 128
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPD----SSN------WSELAGTYGYVAPELAYT 866
D++++N L+D + VSDFG + + D S WS APE+ +
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS---------APEVFHY 179
Query: 867 MKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924
K + K DV++FG+L EV G+ P +E + + RL P
Sbjct: 180 FKYSSKSDVWAFGILMWEVFSLGKMP-----------YDLYTNSEVVLKVSQGHRLYRP- 227
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+I ++ SC PE+RP Q++ +
Sbjct: 228 -----HLASDTIYQIMYSCWHELPEKRPTFQQLLSSI 259
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 4e-31
Identities = 74/242 (30%), Positives = 110/242 (45%), Gaps = 14/242 (5%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTN 133
L + P + ++ L+L+ENQ+ + +L L+ L LS NH I L N
Sbjct: 55 LREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLAN 113
Query: 134 LEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNS 190
L L +F N L +IP +LS LK L L N ++ IP + SL L L
Sbjct: 114 LNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIES-IPSYAFNRIPSLRRLDLGELK 171
Query: 191 LPGSIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-G 248
I LSNL YL L +LR IP+ L KL +L+LS N LS +I
Sbjct: 172 RLSYISEGAFEGLSNLRYLNLAMCNLRE-IPN-LTPLIKLDELDLSGNHLS-AIRPGSFQ 228
Query: 249 NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI-GNFMNLNSLSVG 307
L L L + Q+Q++ ++ NL SL ++L N L+ +P ++ +L + +
Sbjct: 229 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLH 287
Query: 308 GN 309
N
Sbjct: 288 HN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-27
Identities = 66/236 (27%), Positives = 96/236 (40%), Gaps = 16/236 (6%)
Query: 62 ISINLTSTSLKG----TLDQFPFSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLS 116
IS N +L + F HL L L+ N + I L L L L
Sbjct: 62 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHI-RTIEIGAFNGLANLNTLELF 120
Query: 117 SNHFSGKIPSEI-GLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLAL-DGNHLDGPIP 172
N + IP+ L+ L+ L + N + SIP + SL+ L L + L
Sbjct: 121 DNRLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISE 178
Query: 173 VSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232
+ LS+L L L +L IP+ + L L L L NHL P SF L L KL
Sbjct: 179 GAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 236
Query: 233 ELSNNQLSGSIPQE-IGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQL 287
+ +Q+ I + NL+ L +++L+ N L + L LE +HL+ N
Sbjct: 237 WMIQSQIQ-VIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 4e-23
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 13/233 (5%)
Query: 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNW-WNCPQLGILKIAGN 405
T+ + L +NQ+ + F +L++ LS N + L L++ N
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHI-RTIEIGAFNGLANLNTLELFDN 122
Query: 406 NITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLIL-NGNQLSGGIPPE- 462
+T IP ++L EL +N + + SL L L +LS I
Sbjct: 123 RLTT-IPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY-ISEGA 180
Query: 463 LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDL 522
L++L YL+L+ IP N+ L+KL L++S N S P L+ L +L +
Sbjct: 181 FEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWM 238
Query: 523 SHNLLRGEIPPE-ICNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYN 573
+ ++ I NL+SL ++NL+HNNL+ +P + F +H L I + +N
Sbjct: 239 IQSQIQ-VIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-22
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 11/213 (5%)
Query: 368 GIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELDF 426
GI N +L +L N+ +++ + L IL+++ N+I I L+ L+
Sbjct: 61 GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-IEIGAFNGLANLNTLEL 119
Query: 427 SSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSKSIPG 485
N L L+ L +L L N + IP + L LDL + I
Sbjct: 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIES-IPSYAFNRIPSLRRLDLGELKRLSYISE 178
Query: 486 NM-GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEI-CNLESLEK 543
L L YLN++ EIP L L++L ELDLS N L I P L L+K
Sbjct: 179 GAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQK 235
Query: 544 LNLSHNNLSGSIPTN-FENMHGLLSIDISYNEL 575
L + + + I N F+N+ L+ I++++N L
Sbjct: 236 LWMIQSQIQ-VIERNAFDNLQSLVEINLAHNNL 267
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 2e-20
Identities = 47/199 (23%), Positives = 75/199 (37%), Gaps = 11/199 (5%)
Query: 395 PQLGILKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGN 453
+L + N I I + L L S NH+ L +LN L L N
Sbjct: 64 TNTRLLNLHENQIQI-IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122
Query: 454 QLSGGIPPE-LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQ-L 511
+L+ IP L+ L L L N + L L++ + I
Sbjct: 123 RLTT-IPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAF 181
Query: 512 GKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDI 570
L L L+L+ LR P + L L++L+LS N+LS +I F+ + L + +
Sbjct: 182 EGLSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWM 238
Query: 571 SYNELDGPIPSIEAFRHAP 589
+++ I AF +
Sbjct: 239 IQSQIQV-IER-NAFDNLQ 255
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 4e-31
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 32/266 (12%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G+G YG VY +L + +A+K++ + EI ++H+NIV++ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQYLG 86
Query: 755 FCSHARHSFLVYEYLERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
S + E + GSL+ +L S+ + + K + L Y+H I
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---I 143
Query: 814 VHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPE--LAYTMKV 869
VHRD+ NVL++ Y + SDFGT+K L + GT Y+APE
Sbjct: 144 VHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF---DARLPPPWLE 926
+ D++S G +E+ G+ P + E MF ++ P +
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPF-------------YELGEPQAAMFKVGMFKVHPE-IP 248
Query: 927 VGVEDKLKSIIEVALSCVDANPERRP 952
+ + K+ I L C + +P++R
Sbjct: 249 ESMSAEAKAFI---LKCFEPDPDKRA 271
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 5e-31
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 50/279 (17%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V + VA+K + + + EF+ E K + + H +V+ YG C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYM--HHECRPPIV 814
+ R F++ EY+ G L L + + + K V A+ Y+ +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQ-----FL 142
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD----SSN------WSELAGTYGYVAPELA 864
HRD++++N L++ + VSDFG ++ + D S WS PE+
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS---------PPEVL 193
Query: 865 YTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPP 922
K + K D+++FGVL E+ G+ P +E +H+ RL
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMP-----------YERFTNSETAEHIAQGLRLYR 242
Query: 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
P + + + SC + RP ++ +
Sbjct: 243 P------HLASEKVYTIMYSCWHEKADERPTFKILLSNI 275
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 5e-31
Identities = 62/278 (22%), Positives = 116/278 (41%), Gaps = 46/278 (16%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G +G V+ VAVK L + FL+E + ++H+ +V+ Y
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+ +++ EY+E GSL L + + ++ +K +++ +A ++++ +H
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPD----SSN------WSELAGTYGYVAPELAY 865
RD+ + N+L+ ++DFG A+L++ + W+ APE
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT---------APEAIN 183
Query: 866 TMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPP 923
T K DV+SFG+L E++ G+ P PG E I ++ R+ P
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIP-----------YPGMTNPEVIQNLERGYRMVRP 232
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
++L ++ C PE RP + L
Sbjct: 233 ---DNCPEELYQLM---RLCWKERPEDRPTFDYLRSVL 264
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 6e-31
Identities = 55/285 (19%), Positives = 110/285 (38%), Gaps = 41/285 (14%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G GG+ V E L G A+K++ + ++E E H NI++ +
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQ--DREEAQREADMHRLFNHPNILRLVAY 94
Query: 756 CSHARHS----FLVYEYLERGSLARILSSETATEMDWSKR--VNVIKGVAHALSYMHHEC 809
C R + +L+ + +RG+L + ++ + ++ G+ L +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH--- 151
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA---------GTYGYVA 860
HRD+ N+LL E + + D G+ + T Y A
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 861 PEL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916
PEL ++ + + E+ DV+S G + ++ G+ P D G ++ A+ +
Sbjct: 212 PELFSVQSHCV-IDERTDVWSLGCVLYAMMFGEGPYD------MVFQKGDSVALAVQNQL 264
Query: 917 DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM-QIVCKL 960
P L ++ S + +P +RP++ ++ +L
Sbjct: 265 S---IPQSPRHS--SALWQLLN---SMMTVDPHQRPHIPLLLSQL 301
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 124 bits (312), Expect = 7e-31
Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 17/305 (5%)
Query: 654 KDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAEL-PS 712
K +E E + + + L + LT + K V E ++F++ +G G G V+K PS
Sbjct: 2 KKLEELELDEQQRKRLEAFLTQKQK-VGEL---KDDDFEKISELGAGNGGVVFKVSHKPS 57
Query: 713 GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERG 772
G +A K +H + + + + E++ L IV FYG + E+++ G
Sbjct: 58 GLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116
Query: 773 SLARIL-SSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA 831
SL ++L + E K V V L+Y+ + + I+HRDV N+L++ E
Sbjct: 117 SLDQVLKKAGRIPEQILGK---VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 171
Query: 832 HVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+ DFG + L S + GT Y++PE + + D++S G+ +E+ G++P
Sbjct: 172 KLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
Query: 892 ---KDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANP 948
D P +I E+ V+ P
Sbjct: 230 IPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP 289
Query: 949 ERRPN 953
+ P+
Sbjct: 290 PKLPS 294
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 7e-31
Identities = 65/244 (26%), Positives = 100/244 (40%), Gaps = 14/244 (5%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTN 133
L + P + S+ YL+L EN + +L L+ L L N +I L +
Sbjct: 66 LSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLAS 124
Query: 134 LEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNS 190
L L +F N L IP +LS L+ L L N ++ IP + SL+ L L
Sbjct: 125 LNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLMRLDLGELK 182
Query: 191 LPGSIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQE-IG 248
I L NL YL L +++ +P + L L +LE+S N I
Sbjct: 183 KLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFP-EIRPGSFH 239
Query: 249 NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI-GNFMNLNSLSVG 307
L L L + +Q+ ++ L+SL L+L N LS +P ++ L L +
Sbjct: 240 GLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLH 298
Query: 308 GNQF 311
N +
Sbjct: 299 HNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 6e-28
Identities = 66/257 (25%), Positives = 96/257 (37%), Gaps = 23/257 (8%)
Query: 48 CTWSG--ISCNHAG-----RIISINLTSTSLKG----TLDQFPFSLFSHLSYLDLNENQL 96
C+ + C G + I N +L + F HL L L N +
Sbjct: 52 CSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI 111
Query: 97 YGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVLHMFVNHLNGSIPE--IG 152
I L L L L N + IPS L+ L L + N + SIP
Sbjct: 112 -RQIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFN 168
Query: 153 HLSSLKNLAL-DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLK 211
+ SL L L + L+ + L +L L L ++ +P ++ L L L +
Sbjct: 169 RVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMS 226
Query: 212 KNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQE-IGNLKLLTDLSLSQNQLRGTVPSS 270
NH P SF L L KL + N+Q+S I + L L +L+L+ N L
Sbjct: 227 GNHFPEIRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLSSLPHDL 285
Query: 271 LSNLSSLEILHLYDNQL 287
+ L L LHL+ N
Sbjct: 286 FTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 3e-24
Identities = 46/257 (17%), Positives = 86/257 (33%), Gaps = 12/257 (4%)
Query: 203 SNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQ 262
+ + + L +P L L N + +L L L L +N
Sbjct: 54 NQFSKVVCTRRGLSE-VPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 263 LRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI-GNFMNLNSLSVGGNQFTGFLPQNICQ 321
+R + + L+SL L L+DN L+ IP L L + N +
Sbjct: 111 IRQIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNR 169
Query: 322 SGSLQYFSVHDNYFIGSLPK-TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380
SL + + + + + +L+ + L + ++ + L+ ++S
Sbjct: 170 VPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DM-PNLTPLVGLEELEMSG 227
Query: 381 NKFYGELSSNW-WNCPQLGILKIAGNNITGGIPPE-IGNATQLHELDFSSNHLVGKVPLE 438
N F E+ L L + + ++ I L EL+ + N+L
Sbjct: 228 NHF-PEIRPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLSSLPHDL 285
Query: 439 LANLTSLNDLILNGNQL 455
L L +L L+ N
Sbjct: 286 FTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 2e-23
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 13/233 (5%)
Query: 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSN-WWNCPQLGILKIAGN 405
++ + L +N + +D F +L++ L N ++ + L L++ N
Sbjct: 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI-RQIEVGAFNGLASLNTLELFDN 133
Query: 406 NITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLIL-NGNQLSGGIPPE- 462
+T IP ++L EL +N + + SL L L +L I
Sbjct: 134 WLTV-IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEY-ISEGA 191
Query: 463 LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDL 522
L +L YL+L +P N+ L+ L L MS N F + P L L +L +
Sbjct: 192 FEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWV 249
Query: 523 SHNLLRGEIPPE-ICNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYN 573
++ + I L SL +LNL+HNNLS S+P + F + L+ + + +N
Sbjct: 250 MNSQVS-LIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 7e-23
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 11/213 (5%)
Query: 368 GIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELDF 426
GI N + +L N + + + L +L++ N+I I L+ L+
Sbjct: 72 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ-IEVGAFNGLASLNTLEL 130
Query: 427 SSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE-LGLLTDLGYLDLSANRFSKSIPG 485
N L L+ L +L L N + IP + L LDL + + I
Sbjct: 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLMRLDLGELKKLEYISE 189
Query: 486 NM-GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPE-ICNLESLEK 543
L L YLN+ ++P L LV L EL++S N EI P L SL+K
Sbjct: 190 GAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFP-EIRPGSFHGLSSLKK 246
Query: 544 LNLSHNNLSGSIPTN-FENMHGLLSIDISYNEL 575
L + ++ +S I N F+ + L+ +++++N L
Sbjct: 247 LWVMNSQVS-LIERNAFDGLASLVELNLAHNNL 278
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 9e-23
Identities = 63/327 (19%), Positives = 98/327 (29%), Gaps = 80/327 (24%)
Query: 227 RKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQ 286
+ +K+ + LS +PQ I L+L +N ++ + +L LE+L L N
Sbjct: 54 NQFSKVVCTRRGLS-EVPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 287 LSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNC 346
+ I
Sbjct: 111 IR-QIE-----------------------------------------------VGAFNGL 122
Query: 347 TSLERVRLEKNQLIGNISDD-FGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGN 405
SL + L N + I F L+ L N S + P L L +
Sbjct: 123 ASLNTLELFDNW-LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL 181
Query: 406 NITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL 465
I L +L L L + P L
Sbjct: 182 KKLEYISEGA-----------------------FEGLFNLKYLNLGMCNIKD--MPNLTP 216
Query: 466 LTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHN 525
L L L++S N F + PG+ L L L + +++ S L L EL+L+HN
Sbjct: 217 LVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHN 276
Query: 526 LLRGEIPPEIC-NLESLEKLNLSHNNL 551
L +P ++ L L +L+L HN
Sbjct: 277 NLS-SLPHDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 3e-22
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVL 137
F+ + L+ L+L +N L IPS L+KL+ L L +N IPS + +L L
Sbjct: 119 FNGLASLNTLELFDNWL-TVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRL 176
Query: 138 HMF-VNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
+ + L I E L +LK L L ++ +P ++ L L L + N P
Sbjct: 177 DLGELKKLE-YISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEI 233
Query: 195 IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLL 253
P S LS+L L++ + + ++F L L +L L++N LS S+P ++ L+ L
Sbjct: 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLRYL 292
Query: 254 TDLSLSQNQLR 264
+L L N
Sbjct: 293 VELHLHHNPWN 303
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 4e-21
Identities = 43/199 (21%), Positives = 67/199 (33%), Gaps = 11/199 (5%)
Query: 395 PQLGILKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGN 453
L + NNI I + + L L N + L SLN L L N
Sbjct: 75 SNTRYLNLMENNIQM-IQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133
Query: 454 QLSGGIPPE-LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQ-L 511
L+ IP L+ L L L N + L L++ + + I
Sbjct: 134 WLTV-IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAF 192
Query: 512 GKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDI 570
L L L+L ++ P + L LE+L +S N+ I F + L + +
Sbjct: 193 EGLFNLKYLNLGMCNIKD--MPNLTPLVGLEELEMSGNHFP-EIRPGSFHGLSSLKKLWV 249
Query: 571 SYNELDGPIPSIEAFRHAP 589
+++ I AF
Sbjct: 250 MNSQVSL-IER-NAFDGLA 266
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 8e-31
Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 36/275 (13%)
Query: 697 IGRGGYGSVYKAELPSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
+G G +GSV + VA+K L T + +E + E + + + + IV+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD-TEEMMREAQIMHQLDNPYIVRLI 76
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY---MHHECR 810
G C LV E G L + L + E+ S ++ V+ + Y +
Sbjct: 77 GVCQAEAL-MLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---- 130
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT---YGYVAPELAYTM 867
VHRD++++NVLL + A +SDFG +K L D S ++ + + APE
Sbjct: 131 --FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 868 KVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926
K + + DV+S+GV E + GQ P + G + I+ R+ P
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKPYK--------KMKGPEVMAFIEQGK--RMECP--- 235
Query: 927 VGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ + + C E RP+ + + ++
Sbjct: 236 ---PECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 2e-30
Identities = 65/283 (22%), Positives = 112/283 (39%), Gaps = 32/283 (11%)
Query: 697 IGRGGYGSVYKAEL-PSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G V P+ D VAVK L + G H+ + EI L + H +I+K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQ-HRSGWKQEIDILRTLYHEHIIK 97
Query: 752 FYGFCSHARHS--FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ G C A + LV EY+ GSL L + ++ + + + ++Y+ H
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIG---LAQLLLFAQQICEGMAYL-HAQ 153
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-----APELA 864
+HRD++++NVLLD + + DFG AK + + G APE
Sbjct: 154 H--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR--VREDGDSPVFWYAPECL 209
Query: 865 YTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSL---PGANMNEAIDHMFD-AR 919
K DV+SFGV E++ + + + + + + R
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 269
Query: 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
LP P + + + +C + RP + + +L
Sbjct: 270 LPRP------DKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 2e-30
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 22/250 (8%)
Query: 649 SQRRKKDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKA 708
S K + E N LL+ Y E + + + +GRG +G V++
Sbjct: 21 SSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQP---RVGRGSFGEVHRM 77
Query: 709 -ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767
+ +G AVKK+ + + E+ A G+ IV YG + E
Sbjct: 78 KDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130
Query: 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827
LE GSL +++ + + + + L Y+H I+H DV + NVLL
Sbjct: 131 LLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSS 185
Query: 828 E-YEAHVSDFGTAKLLKPDSSNWSE-----LAGTYGYVAPELAYTMKVTEKCDVYSFGVL 881
+ A + DFG A L+PD S + GT ++APE+ K D++S +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 882 ALEVIKGQHP 891
L ++ G HP
Sbjct: 246 MLHMLNGCHP 255
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-30
Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 35/269 (13%)
Query: 691 FDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNI 749
+ IG+G G+VY A ++ +G VA+++++ ++ ++EI + ++ NI
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNI 79
Query: 750 VKFYGFCSHARHSFL--VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
V + S+ L V EYL GSL +++ E + V + AL ++H
Sbjct: 80 VNYLD--SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHS 134
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
++HRD+ S N+LL + ++DFG + P+ S S + GT ++APE+
Sbjct: 135 N---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN--EAIDHMFDARLPPPWL 925
K D++S G++A+E+I+G+ P P N N A+ + A P L
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGE-P------------PYLNENPLRALYLI--ATNGTPEL 236
Query: 926 EVGVE--DKLKSIIEVALSCVDANPERRP 952
+ + + + C++ + E+R
Sbjct: 237 QNPEKLSAIFRDFLNR---CLEMDVEKRG 262
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-30
Identities = 71/282 (25%), Positives = 114/282 (40%), Gaps = 31/282 (10%)
Query: 697 IGRGGYGSVYKAEL-PSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G+G +GSV P GD VAVK+L Q++F EI+ L + IVK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQH--SGPDQQRDFQREIQILKALHSDFIVK 88
Query: 752 FYGFCSHARHS--FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ G LV EYL G L L A +D S+ + + + Y+
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYL-GSR 146
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-----APELA 864
R VHRD++++N+L++ E ++DFG AKLL D + G APE
Sbjct: 147 R--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV--VREPGQSPIFWYAPESL 202
Query: 865 YTMKVTEKCDVYSFGVLALEVI-KGQHP---KDLLSSLSDSSLPGANMNEAIDHMFDA-R 919
+ + DV+SFGV+ E+ + ++ ++ + + R
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR 262
Query: 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
LP P + E+ C +P+ RP+ + L
Sbjct: 263 LPAP------PACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 4e-30
Identities = 61/308 (19%), Positives = 114/308 (37%), Gaps = 65/308 (21%)
Query: 680 VYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGD--------TVAVKKLHSFTGETTHQ 731
V+ +I F+ES +G+G + ++K V +K L +
Sbjct: 1 VFHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK--AHRNYS 56
Query: 732 KEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR 791
+ F ++ + H+++V YG C + LV E+++ GSL L ++ +
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILWK 115
Query: 792 VNVIKGVAHALSYM--HHECRPPIVHRDVSSKNVLLDFEYEAH--------VSDFGTAKL 841
+ V K +A A+ ++ + ++H +V +KN+LL E + +SD G +
Sbjct: 116 LEVAKQLAAAMHFLEENT-----LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT 170
Query: 842 LKPDSSNWSELAGTYGYV-----APE-LAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDL 894
+ P PE + + D +SFG E+ G P
Sbjct: 171 VLPKD---------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP--- 218
Query: 895 LSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN 953
L + + D +LP P K + + +C+D P+ RP+
Sbjct: 219 --------LSALDSQRKLQFYEDRHQLPAP--------KAAELANLINNCMDYEPDHRPS 262
Query: 954 -MQIVCKL 960
I+ L
Sbjct: 263 FRAIIRDL 270
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 4e-30
Identities = 61/274 (22%), Positives = 100/274 (36%), Gaps = 20/274 (7%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTN 133
L+ P L + LDL+ N++ S + L+ L L+SN + I + L +
Sbjct: 43 LNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGS 101
Query: 134 LEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNS 190
LE L + N+L ++ LSSL L L GN S+ +L+ L L + N
Sbjct: 102 LEHLDLSYNYL-SNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD 160
Query: 191 LPGSIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-G 248
I L+ L L + + L+ P S ++ ++ L L Q + +
Sbjct: 161 TFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVD 219
Query: 249 NLKLLTDLSLSQNQLRGT--------VPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN 300
+ L L L +SL + + + D L + + +
Sbjct: 220 VTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISG 278
Query: 301 LNSLSVGGNQFTGFLPQNICQS-GSLQYFSVHDN 333
L L NQ +P I SLQ +H N
Sbjct: 279 LLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 6e-28
Identities = 52/267 (19%), Positives = 94/267 (35%), Gaps = 24/267 (8%)
Query: 62 ISINLTSTSLKG----TLDQFPFSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLS 116
++ + S L + +L L L N + I +L L+ L+LS
Sbjct: 50 LTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGI-NTIEEDSFSSLGSLEHLDLS 108
Query: 117 SNHFSGKIPSEI-GLLTNLEVLHMFVNHLNGSIPEIG---HLSSLKNLALDGNHLDGPIP 172
N+ S + S L++L L++ N ++ E HL+ L+ L + I
Sbjct: 109 YNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQ 166
Query: 173 VSI-GNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTK 231
L+ L L + + L P S+ ++ N+ +L L + +
Sbjct: 167 RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVEC 226
Query: 232 LELSNNQLSGSIPQEI--------GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLY 283
LEL + L E+ ++ ++ L V L+ +S L L
Sbjct: 227 LELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFS 285
Query: 284 DNQLSGHIPQEI-GNFMNLNSLSVGGN 309
NQL +P I +L + + N
Sbjct: 286 RNQLKS-VPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-25
Identities = 55/324 (16%), Positives = 113/324 (34%), Gaps = 54/324 (16%)
Query: 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQ 293
S+ L+ SIP + + + L LS N++ S L +L+ L L N ++ I +
Sbjct: 38 GSSGSLN-SIPSGL--TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEE 93
Query: 294 EIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLP-KTLRNCTSLERV 352
+F +L GSL++ + NY + +L + +SL +
Sbjct: 94 --DSFSSL---------------------GSLEHLDLSYNY-LSNLSSSWFKPLSSLTFL 129
Query: 353 RLEKNQLIGNISDD--FGIYPNLKLFDLSYNKFYGELSSNW-WNCPQLGILKIAGNNITG 409
L N + + F L++ + + ++ L L+I +++
Sbjct: 130 NLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS 188
Query: 410 GIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTD 468
P+ + + L + + + + +S+ L L L
Sbjct: 189 -YEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDT----------- 236
Query: 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLR 528
+ S ++ + ++ ++ L ++ L EL+ S N L+
Sbjct: 237 -----FHFSELSTGETNSLIKKFTFRNVKITDESL-FQVMKLLNQISGLLELEFSRNQLK 290
Query: 529 GEIPPEIC-NLESLEKLNLSHNNL 551
+P I L SL+K+ L N
Sbjct: 291 S-VPDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 2e-17
Identities = 38/241 (15%), Positives = 86/241 (35%), Gaps = 15/241 (6%)
Query: 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNW-WNCPQLGILKIAGN 405
+++ + L N++ + D NL+ L+ N + + + L L ++ N
Sbjct: 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGI-NTIEEDSFSSLGSLEHLDLSYN 110
Query: 406 NITGGIPPEI-GNATQLHELDFSSNHLVGKVPLEL-ANLTSLNDLILNGNQLSGGIPPE- 462
++ + + L L+ N L ++LT L L + I +
Sbjct: 111 YLSN-LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKD 169
Query: 463 LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDL 522
LT L L++ A+ P ++ + + +L + + + I + + L+L
Sbjct: 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLEL 229
Query: 523 SHNLLRGEIPPEIC--------NLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNE 574
L E+ + + ++ +L + + GLL ++ S N+
Sbjct: 230 RDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQ 288
Query: 575 L 575
L
Sbjct: 289 L 289
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 1e-14
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 11/187 (5%)
Query: 394 CPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGN 453
C + GI K + ++ IP + A + LD S+N + +L +L L+L N
Sbjct: 30 CDRNGICKGSSGSLNS-IPSGLTEAVK--SLDLSNNRITYISNSDLQRCVNLQALVLTSN 86
Query: 454 QLSGGIPPEL-GLLTDLGYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPIQL 511
++ I + L L +LDLS N S ++ + L L +LN+ N + L
Sbjct: 87 GINT-IEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSL 144
Query: 512 -GKLVQLSELDLSHNLLRGEIPPEI-CNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSI 568
L +L L + + +I + L LE+L + ++L S +++ + +
Sbjct: 145 FSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ-SYEPKSLKSIQNVSHL 203
Query: 569 DISYNEL 575
+ +
Sbjct: 204 ILHMKQH 210
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 12/122 (9%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI--------GL 130
++S+L L+ Q + + ++ L L SE+
Sbjct: 194 LKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIK 252
Query: 131 LTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNN 189
+ + L + + +S L L N L +P I L+SL ++L+ N
Sbjct: 253 KFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTN 311
Query: 190 SL 191
Sbjct: 312 PW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 8e-06
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 12/99 (12%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI--------GNLTKLKFLNLSSNHFSGKIPSEIGLL 131
+ S + L+L + L S + + + ++ ++ + +
Sbjct: 218 VDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQI 276
Query: 132 TNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLD 168
+ L L N L S+P+ L+SL+ + L N D
Sbjct: 277 SGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 314
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 4e-30
Identities = 78/295 (26%), Positives = 124/295 (42%), Gaps = 48/295 (16%)
Query: 683 EIIRSINNFDESFCIGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEI 738
EI S + ++ IG G G V L VA+K L + E +++FLSE
Sbjct: 45 EIEASRIHIEK--IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ-RRDFLSEA 101
Query: 739 KALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGV 798
+ H NI++ G + R + +V EY+E GSL L + + + V +++GV
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGV 160
Query: 799 AHALSY---MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG- 854
+ Y + VHRD++++NVL+D VSDFG +++L+ D G
Sbjct: 161 GAGMRYLSDLG------YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGG 214
Query: 855 ------TYGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGAN 907
T APE + DV+SFGV+ EV+ G+ P
Sbjct: 215 KIPIRWT----APEAIAFRTFSSASDVWSFGVVMWEVLAYGERP-----------YWNMT 259
Query: 908 MNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ I + + RLP P ++ ++ L C + +RP QIV L
Sbjct: 260 NRDVISSVEEGYRLPAP------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 4e-30
Identities = 61/277 (22%), Positives = 105/277 (37%), Gaps = 39/277 (14%)
Query: 697 IGRGGYGSVYKAELPSGD-----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G+VYK VA+K+L T KE L E + V + ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNPHVCR 81
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G C L+ + + G L + + +N +A ++Y+
Sbjct: 82 LLGICL-TSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR-- 137
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-----APELAYT 866
+VHRD++++NVL+ ++DFG AKLL + E G V A E
Sbjct: 138 -LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYHAEGGKVPIKWMALESILH 193
Query: 867 MKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924
T + DV+S+GV E++ G P G +E + RLP P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKP-----------YDGIPASEISSILEKGERLPQP- 241
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ + C + + RP +++ +
Sbjct: 242 -----PICTIDVYMIMRKCWMIDADSRPKFRELIIEF 273
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 5e-30
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 691 FDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNI 749
D IG G G V A E SG VAVK + + ++ +E+ + +H N+
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR--RELLFNEVVIMRDYQHFNV 104
Query: 750 VKFYGFCSHARHSFL--VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
V+ Y S+ L + E+L+ G+L I+S E + V + V AL+Y+H
Sbjct: 105 VEMYK--SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT---VCEAVLQALAYLHA 159
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
+ ++HRD+ S ++LL + +SDFG + D L GT ++APE+
Sbjct: 160 Q---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRS 216
Query: 868 KVTEKCDVYSFGVLALEVIKGQHP 891
+ D++S G++ +E++ G+ P
Sbjct: 217 LYATEVDIWSLGIMVIEMVDGEPP 240
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 6e-30
Identities = 65/314 (20%), Positives = 126/314 (40%), Gaps = 62/314 (19%)
Query: 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLS---- 736
+E+ ++++ ++ +G G G+V G VAVK++ +F
Sbjct: 9 FEQSLKNLVVSEKI--LGYGSSGTVVFQGSFQGRPVAVKRM---------LIDFCDIALM 57
Query: 737 EIKALTGV-RHRNIVKFYGFCSHARHSFLVYEYLERGSL-----ARILSSETATEMDWSK 790
EIK LT H N++++Y + R ++ E +L ++ +S E
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYN 116
Query: 791 RVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH-------------VSDFG 837
+++++ +A ++++H I+HRD+ +N+L+ +SDFG
Sbjct: 117 PISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 838 TAKLLKPDSSNW----SELAGTYGYVAPEL-------AYTMKVTEKCDVYSFGVLALEVI 886
K L S++ + +GT G+ APEL ++T D++S G + ++
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 887 -KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVD 945
KG+HP D +N+ I D + E +I +D
Sbjct: 234 SKGKHP------FGDKYSRESNIIRGI-FSLDEMKCLHDRSLIAEA--TDLIS---QMID 281
Query: 946 ANPERRPNMQIVCK 959
+P +RP V +
Sbjct: 282 HDPLKRPTAMKVLR 295
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 6e-30
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 10/219 (4%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTN 133
L P + + + L+ N++ + L L L SN + +I + L
Sbjct: 23 LQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLAL 81
Query: 134 LEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNS 190
LE L + N S+ L L L LD L + + L++L LYL +N+
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNA 140
Query: 191 LPGSIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-G 248
L ++P +L NL +LFL N + +F L L +L L N+++ +
Sbjct: 141 L-QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFR 198
Query: 249 NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQL 287
+L L L L N L +L+ L +L+ L L DN
Sbjct: 199 DLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 4e-25
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 9/215 (4%)
Query: 171 IPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT 230
+PV I ++ ++L+ N + +S NL L+L N L ++F L L
Sbjct: 26 VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 231 KLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289
+L+LS+N S+ L L L L + L+ P L++L+ L+L DN L
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ- 142
Query: 290 HIPQEI-GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK-TLRNCT 347
+P + + NL L + GN+ + + SL +H N + + R+
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR-VAHVHPHAFRDLG 201
Query: 348 SLERVRLEKNQLIGNISDD-FGIYPNLKLFDLSYN 381
L + L N L + + L+ L+ N
Sbjct: 202 RLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 7e-23
Identities = 52/212 (24%), Positives = 79/212 (37%), Gaps = 11/212 (5%)
Query: 368 GIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELDF 426
GI + L N+ ++++ C L IL + N + I L +LD
Sbjct: 29 GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLAR-IDAAAFTGLALLEQLDL 87
Query: 427 SSNHLVGKVPLE-LANLTSLNDLILNGNQLSGGIPPE-LGLLTDLGYLDLSANRFSKSIP 484
S N + V L L+ L L+ L + P L L YL L N ++P
Sbjct: 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNALQ-ALP 145
Query: 485 GNM-GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEI-CNLESLE 542
+ L L +L + N S L L L L N + + P +L L
Sbjct: 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFRDLGRLM 204
Query: 543 KLNLSHNNLSGSIPTN-FENMHGLLSIDISYN 573
L L NNLS ++PT + L + ++ N
Sbjct: 205 TLYLFANNLS-ALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 9e-22
Identities = 41/186 (22%), Positives = 65/186 (34%), Gaps = 9/186 (4%)
Query: 395 PQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQ 454
+ + GN I+ L L SN L L L L L+ N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 455 LSGGIPPE-LGLLTDLGYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPIQ-L 511
+ P L L L L + + L L YL + N Q +P
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNAL-QALPDDTF 149
Query: 512 GKLVQLSELDLSHNLLRGEIPPEI-CNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSID 569
L L+ L L N + +P L SL++L L N ++ + + F ++ L+++
Sbjct: 150 RDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFRDLGRLMTLY 207
Query: 570 ISYNEL 575
+ N L
Sbjct: 208 LFANNL 213
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 1e-20
Identities = 49/209 (23%), Positives = 74/209 (35%), Gaps = 7/209 (3%)
Query: 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNW-WNCPQLGILKIAGN 405
+ +R+ L N++ + F NL + L N + + L L ++ N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVL-ARIDAAAFTGLALLEQLDLSDN 90
Query: 406 NITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE-L 463
+ P +LH L L P L +L L L N L +P +
Sbjct: 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTF 149
Query: 464 GLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLS 523
L +L +L L NR S L L L + N + P L +L L L
Sbjct: 150 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLF 209
Query: 524 HNLLRGEIPPEI-CNLESLEKLNLSHNNL 551
N L +P E L +L+ L L+ N
Sbjct: 210 ANNLS-ALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 2e-19
Identities = 54/262 (20%), Positives = 82/262 (31%), Gaps = 55/262 (20%)
Query: 219 IPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLE 278
+P ++ L N++S + LT L L N L ++ + L+ LE
Sbjct: 26 VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 279 ILHLYDNQLSGHIPQEI-GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIG 337
L L DN + L++L + L
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-----------ELG----------- 121
Query: 338 SLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQL 397
P R +L+ + L+ N + + DD F + L
Sbjct: 122 --PGLFRGLAALQYLYLQDNA-LQALPDD--------TFR---------------DLGNL 155
Query: 398 GILKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS 456
L + GN I+ +P L L N + P +L L L L N LS
Sbjct: 156 THLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214
Query: 457 GGIPPE-LGLLTDLGYLDLSAN 477
+P E L L L YL L+ N
Sbjct: 215 -ALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 7/133 (5%)
Query: 459 IPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS 518
+P G+ + L NR S + L L + SN ++ L L
Sbjct: 26 VPV--GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 519 ELDLSHNLLRGEIPPEI-CNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNELD 576
+LDLS N + P L L L+L L + F + L + + N L
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ 142
Query: 577 GPIPSIEAFRHAP 589
+P + FR
Sbjct: 143 A-LPD-DTFRDLG 153
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 75 LDQFPFSLFSHLS---YLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-G 129
L P F L +L L+ N++ ++P L L L L N + +
Sbjct: 141 LQALPDDTFRDLGNLTHLFLHGNRI-SSVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFR 198
Query: 130 LLTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLD 168
L L L++F N+L+ ++P + L +L+ L L+ N
Sbjct: 199 DLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPWV 238
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 7e-30
Identities = 58/272 (21%), Positives = 102/272 (37%), Gaps = 33/272 (12%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV 744
+F +G G YG V+K G AVK+ S + L+E+ + V
Sbjct: 54 FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV 113
Query: 745 -RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALS 803
+H V+ +L E SL + + A+ + ++ ++ AL+
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTELCG-PSLQQHCEAWGAS-LPEAQVWGYLRDTLLALA 171
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL 863
++H + +VH DV N+ L + DFG L + + G Y+APEL
Sbjct: 172 HLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE-GDPRYMAPEL 227
Query: 864 ---AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920
+Y DV+S G+ LEV + E + L
Sbjct: 228 LQGSY----GTAADVFSLGLTILEVACNMEL--------------PHGGEGWQQLRQGYL 269
Query: 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
PP + G+ +L+S++ ++ +P+ R
Sbjct: 270 PPEFTA-GLSSELRSVLV---MMLEPDPKLRA 297
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 7e-30
Identities = 74/285 (25%), Positives = 122/285 (42%), Gaps = 34/285 (11%)
Query: 697 IGRGGYGSVYKAELP-----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G+G +GSV +G+ VAVKKL T E H ++F EI+ L ++H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 75
Query: 752 FYGFCSHARHS--FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ G C A L+ EYL GSL L +D K + + + Y+
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYL-GTK 133
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT------YGYVAPEL 863
R +HRD++++N+L++ E + DFG K+L D + Y APE
Sbjct: 134 R--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY---APES 188
Query: 864 AYTMKVTEKCDVYSFGVLALEVI-----KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918
K + DV+SFGV+ E+ P + + + + + I+ + +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248
Query: 919 -RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
RLP P + I + C + N +RP+ + + +
Sbjct: 249 GRLPRP------DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-29
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 17/235 (7%)
Query: 78 FPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVL 137
FP ++ + ++ + +L + L+ + I + L NL L
Sbjct: 13 FPDPALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVT-TI-EGVQYLNNLIGL 68
Query: 138 HMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPS 197
+ N + + + +L+ + L L GN L I L S+ L L + + + +
Sbjct: 69 ELKDNQIT-DLAPLKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQI--TDVT 123
Query: 198 SIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLS 257
+ LSNL L+L N + S L L L + N Q+S P + NL LT L
Sbjct: 124 PLAGLSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLK 179
Query: 258 LSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312
N++ + S L++L +L +HL +NQ+S P + N NL +++ T
Sbjct: 180 ADDNKI--SDISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 5e-24
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
++L L+L +NQ+ ++ +P+ NLTK+ L LS N K S I L +++ L
Sbjct: 58 GVQYLNNLIGLELKDNQI-TDL-APLKNLTKITELELSGNPL--KNVSAIAGLQSIKTLD 113
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS 198
+ + + + LS+L+ L LD N + P + L++L L + N + S +
Sbjct: 114 LTSTQIT-DVTPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQV--SDLTP 168
Query: 199 IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSL 258
+ NLS L L N + S L L ++ L NNQ+S P + N L ++L
Sbjct: 169 LANLSKLTTLKADDNKISD--ISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
Query: 259 SQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQ 310
+ + +NL ++ P I + S ++ N
Sbjct: 225 TNQTITNQPVFYNNNLVVPNVVKGPSGAPI--APATISDNGTYASPNLTWNL 274
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 18/255 (7%)
Query: 201 NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQ 260
L+N + + K+++ + L +T L ++ +I + L L L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKD 72
Query: 261 NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320
NQ+ T + L NL+ + L L N L I ++ +L + Q T +
Sbjct: 73 NQI--TDLAPLKNLTKITELELSGNPLK--NVSAIAGLQSIKTLDLTSTQITDV--TPLA 126
Query: 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380
+LQ + N I ++ L T+L+ + + Q + +++ L
Sbjct: 127 GLSNLQVLYLDLNQ-ITNIS-PLAGLTNLQYLSIGNAQ-VSDLTP-LANLSKLTTLKADD 182
Query: 381 NKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELA 440
NK S + P L + + N I+ + N + L + ++ + +
Sbjct: 183 NKI--SDISPLASLPNLIEVHLKNNQISD--VSPLANTSNLFIVTLTNQTITNQPVFYNN 238
Query: 441 NLTSLNDLILNGNQL 455
NL N +
Sbjct: 239 NLVVPNVVKGPSGAP 253
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 3e-22
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 14/241 (5%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
P + ++ L+L+ N L S I L +K L+L+S + P + L+NL+VL+
Sbjct: 80 PLKNLTKITELELSGNPL--KNVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLY 135
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS 198
+ +N + +I + L++L+ L++ + P + NLS L L +N + S S
Sbjct: 136 LDLNQIT-NISPLAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI--SDISP 190
Query: 199 IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSL 258
+ +L NL+ + LK N + S L + L+N ++ NL + +
Sbjct: 191 LASLPNLIEVHLKNNQISDV--SPLANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKG 248
Query: 259 SQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQN 318
P+++S+ + +L N S I F + F+G + Q
Sbjct: 249 PSGAP--IAPATISDNGTYASPNLTWNLTSF-INNVSYTFNQSVTFKNTTVPFSGTVTQP 305
Query: 319 I 319
+
Sbjct: 306 L 306
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 3e-19
Identities = 51/240 (21%), Positives = 91/240 (37%), Gaps = 20/240 (8%)
Query: 342 TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELS--SNWWNCPQLGI 399
T + + + + I NL +L N+ ++ + N ++
Sbjct: 36 TQADLDGITTLSAFGTG-VTTIEG-VQYLNNLIGLELKDNQ----ITDLAPLKNLTKITE 89
Query: 400 LKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGI 459
L+++GN + I + LD +S + PL L++L L L+ NQ++ I
Sbjct: 90 LELSGNPLK--NVSAIAGLQSIKTLDLTSTQITDVTPLA--GLSNLQVLYLDLNQITN-I 144
Query: 460 PPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSE 519
P L LT+L YL + + S P + L KL L N+ S P L L L E
Sbjct: 145 SP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIE 199
Query: 520 LDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPI 579
+ L +N + P + N +L + L++ ++ N+ + P
Sbjct: 200 VHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPIAPA 257
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 8e-16
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 14/183 (7%)
Query: 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNG 452
+ +N+T + + L + ++ L +L L L
Sbjct: 17 ALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVTTIEGVQ--YLNNLIGLELKD 72
Query: 453 NQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512
NQ++ + P L LT + L+LS N K++ + L + L+++S + + P L
Sbjct: 73 NQITD-LAP-LKNLTKITELELSGNPL-KNVS-AIAGLQSIKTLDLTSTQITDVTP--LA 126
Query: 513 KLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISY 572
L L L L N + I P + L +L+ L++ + +S + N+ L ++
Sbjct: 127 GLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNAQVS-DLT-PLANLSKLTTLKADD 182
Query: 573 NEL 575
N++
Sbjct: 183 NKI 185
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 10/137 (7%)
Query: 439 LANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNM 498
L + + + ++ L + L +I G + YL L L +
Sbjct: 15 DPALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGV-TTIEG-VQYLNNLIGLEL 70
Query: 499 SSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN 558
N+ + P L L +++EL+LS N L+ + I L+S++ L+L+ ++ T
Sbjct: 71 KDNQITDLAP--LKNLTKITELELSGNPLK-NVSA-IAGLQSIKTLDLTSTQITD--VTP 124
Query: 559 FENMHGLLSIDISYNEL 575
+ L + + N++
Sbjct: 125 LAGLSNLQVLYLDLNQI 141
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 2e-29
Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 38/277 (13%)
Query: 697 IGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G +G V L +VA+K L E +++FL E + H NI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNIIRL 111
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY---MHHEC 809
G + ++ +V EY+E GSL L A + + V +++G+A + Y M
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMG--- 167
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV---APELAYT 866
VHRD++++N+L++ VSDFG ++L+ D G + +PE
Sbjct: 168 ---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 867 MKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924
K T DV+S+G++ EV+ G+ P + + I + + RLPPP
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP-----------YWEMSNQDVIKAVDEGYRLPPP- 272
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
D ++ ++ L C + RP QIV L
Sbjct: 273 -----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-29
Identities = 63/275 (22%), Positives = 112/275 (40%), Gaps = 36/275 (13%)
Query: 697 IGRGGYGSVYKAELPSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
+G G +GSV + VA+K L T + +E + E + + + + IV+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD-TEEMMREAQIMHQLDNPYIVRLI 402
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY---MHHECR 810
G C LV E G L + L + E+ S ++ V+ + Y +
Sbjct: 403 GVCQAEAL-MLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---- 456
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT---YGYVAPELAYTM 867
VHR+++++NVLL + A +SDFG +K L D S ++ + + APE
Sbjct: 457 --FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 868 KVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926
K + + DV+S+GV E + GQ P + G + I+ R+ P
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKPYK--------KMKGPEVMAFIEQGK--RMECP--- 561
Query: 927 VGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ + + C E RP+ + + ++
Sbjct: 562 ---PECPPELYALMSDCWIYKWEDRPDFLTVEQRM 593
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-29
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G +G V K + + AVK ++ + + L E++ L + H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 756 CSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+ ++V E G L I+ + +E D ++ +IK V ++YMH IV
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 815 HRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPEL---AYTMK 868
HRD+ +N+LL+ + + + DFG + + ++ + GT Y+APE+ Y
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLRGTY--- 199
Query: 869 VTEKCDVYSFGV 880
EKCDV+S GV
Sbjct: 200 -DEKCDVWSAGV 210
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-29
Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 29/264 (10%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
L P + S + L+L N+L LT+L L+LSSN S K ++
Sbjct: 19 LTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFK---GCCSQSDF 75
Query: 135 EVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
+SLK L L N + + + L L L +++L
Sbjct: 76 ------------------GTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQM 116
Query: 195 IPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKL 252
S+ +L NL+YL + H R F L L L+++ N + +I L+
Sbjct: 117 SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 176
Query: 253 LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI-GNFMNLNSLSVGGNQF 311
LT L LSQ QL P++ ++LSSL++L++ N + +L L N
Sbjct: 177 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF-SLDTFPYKCLNSLQVLDYSLNHI 235
Query: 312 TGFLPQNICQS--GSLQYFSVHDN 333
+ Q SL + ++ N
Sbjct: 236 M-TSKKQELQHFPSSLAFLNLTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-26
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 10/237 (4%)
Query: 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNK--FYGELSSNWWNCPQLGILKIAG 404
+S R+ LE N+L F L LS N F G S + + L L ++
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87
Query: 405 NNITGGIPPEIGNATQLHELDFSSNHLVGKVPLEL-ANLTSLNDLILNGNQLSGGIPPE- 462
N + + QL LDF ++L + +L +L L ++
Sbjct: 88 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AFNGI 145
Query: 463 LGLLTDLGYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELD 521
L+ L L ++ N F ++ ++ L L +L++S + Q P L L L+
Sbjct: 146 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205
Query: 522 LSHNLLRGEIPPEI-CNLESLEKLNLSHNNLSGSIPTNFENMHGLLS-IDISYNELD 576
+SHN + L SL+ L+ S N++ S ++ L+ ++++ N+
Sbjct: 206 MSHNNFF-SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-26
Identities = 59/282 (20%), Positives = 98/282 (34%), Gaps = 37/282 (13%)
Query: 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289
T++ ++ L+ S+P I T L L N+L+ L+ L L L N LS
Sbjct: 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLS- 65
Query: 290 HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSL 349
G L+Y + N + ++ L
Sbjct: 66 -------------FKGCCSQSDFG-TTS-------LKYLDLSFN-GVITMSSNFLGLEQL 103
Query: 350 ERVRLEKNQLIGNISDD--FGIYPNLKLFDLSYNKFYGELSSNW-WNCPQLGILKIAGNN 406
E + + + + +S+ F NL D+S+ + L +LK+AGN+
Sbjct: 104 EHLDFQHSN-LKQMSEFSVFLSLRNLIYLDISHTHT-RVAFNGIFNGLSSLEVLKMAGNS 161
Query: 407 ITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE-LG 464
P+I L LD S L P +L+SL L ++ N +
Sbjct: 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF-SLDTFPYK 220
Query: 465 LLTDLGYLDLSANRFSKSIPGNM--GYLLKLHYLNMSSNEFS 504
L L LD S N + + L +LN++ N+F+
Sbjct: 221 CLNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 2e-18
Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 8/167 (4%)
Query: 80 FSLFSHLSYLDLNENQLYGNIP--SPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEV 136
F L +LD + L + S +L L +L++S H + I L++LEV
Sbjct: 97 FLGLEQLEHLDFQHSNL-KQMSEFSVFLSLRNLIYLDISHTHTR-VAFNGIFNGLSSLEV 154
Query: 137 LHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
L M N + L +L L L L+ P + +LSSL L + +N+
Sbjct: 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214
Query: 195 IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYL-RKLTKLELSNNQLS 240
L++L L NH+ + L L L+ N +
Sbjct: 215 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 2e-14
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Query: 444 SLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEF 503
S ++ N L+ +P G+ + L+L +N+ G L +L L++SSN
Sbjct: 8 SGTEIRCNSKGLTS-VPT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGL 64
Query: 504 SQE--IPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-FE 560
S + L LDLS N + + LE LE L+ H+NL + F
Sbjct: 65 SFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL 123
Query: 561 NMHGLLSIDISYNEL 575
++ L+ +DIS+
Sbjct: 124 SLRNLIYLDISHTHT 138
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 2e-29
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 34/285 (11%)
Query: 697 IGRGGYGSVYKAELP-----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G+G +GSV +G+ VAVKKL T E H ++F EI+ L ++H NIVK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 106
Query: 752 FYGFCSHARHS--FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ G C A L+ EYL GSL L +D K + + + Y+ +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT------YGYVAPEL 863
+HRD++++N+L++ E + DFG K+L D + Y APE
Sbjct: 166 ---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY---APES 219
Query: 864 AYTMKVTEKCDVYSFGVLALEVI-----KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918
K + DV+SFGV+ E+ P + + + + + I+ + +
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279
Query: 919 -RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
RLP P + I + C + N +RP+ + + +
Sbjct: 280 GRLPRP------DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-29
Identities = 44/189 (23%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G + V + ++ +G A +++ ++ E + ++H NIV+ +
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 756 CSHARHSFLVYEYLERGSLA-RILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
S H +L+++ + G L I++ E +E D S I+ + A+ + H +V
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAVLHCHQMG---VV 132
Query: 815 HRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
HR++ +N+LL + + ++DFG A ++ + W AGT GY++PE+ +
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 192
Query: 872 KCDVYSFGV 880
D+++ GV
Sbjct: 193 PVDLWACGV 201
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 4e-29
Identities = 42/208 (20%), Positives = 82/208 (39%), Gaps = 15/208 (7%)
Query: 696 CIGRG--GYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
IG+G +V A P+G+ V V++++ E+ H NIV +
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
++V ++ GS ++ + M+ +++GV AL Y+HH
Sbjct: 92 RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---G 148
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLL-------KPDSSNWSELAGTYGYVAPELAY 865
VHR V + ++L+ + + ++S + + + +++PE+
Sbjct: 149 YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQ 208
Query: 866 TMKV--TEKCDVYSFGVLALEVIKGQHP 891
K D+YS G+ A E+ G P
Sbjct: 209 QNLQGYDAKSDIYSVGITACELANGHVP 236
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 6e-29
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 33/269 (12%)
Query: 690 NFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQ-KEFLSEIKALTGVRHR 747
FD +G G YGSVYKA +G VA+K++ +E + EI +
Sbjct: 30 VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-----PVESDLQEIIKEISIMQQCDSP 84
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
++VK+YG ++V EY GS++ I+ + + +++ L Y+H
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR-LRNKTLTEDEIATILQSTLKGLEYLHF 143
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
+HRD+ + N+LL+ E A ++DFG A L + + + GT ++APE+ +
Sbjct: 144 M---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI 200
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN--EAIDHMFDARLPPPWL 925
D++S G+ A+E+ +G+ P P A+++ AI + PPP
Sbjct: 201 GYNCVADIWSLGITAIEMAEGK-P------------PYADIHPMRAIFMI--PTNPPPTF 245
Query: 926 EVGVE--DKLKSIIEVALSCVDANPERRP 952
D ++ C+ +PE+R
Sbjct: 246 RKPELWSDNFTDFVKQ---CLVKSPEQRA 271
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 69/276 (25%), Positives = 109/276 (39%), Gaps = 34/276 (12%)
Query: 697 IGRGGYGSVYKAEL--PSGDT--VAVKKLHS-FTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G V + E PSG T VAVK L + +F+ E+ A+ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
YG +V E GSL L VA + Y+ +
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR-- 141
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT---YGYVAPELAYTMK 868
+HRD++++N+LL + DFG + L + ++ + + APE T
Sbjct: 142 -FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 200
Query: 869 VTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA--RLPPPWL 925
+ D + FGV E+ GQ P G N ++ + + RLP P
Sbjct: 201 FSHASDTWMFGVTLWEMFTYGQEP-----------WIGLNGSQILHKIDKEGERLPRP-- 247
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
ED + I V + C PE RP + + L
Sbjct: 248 ----EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 1e-28
Identities = 64/273 (23%), Positives = 106/273 (38%), Gaps = 39/273 (14%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIK-ALTGVRHRNIVKFYG 754
IGRG YGSV K PSG +AVK++ S E QK+ L ++ + IV+FYG
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKE-QKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVN------VIKGVAHALSYMHHE 808
++ E + S + + + AL+++
Sbjct: 89 ALFREGDCWICMELMS-TSFDKFYK---YVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE----LA 864
+ I+HRD+ N+LLD + DFG + L DS + AG Y+APE A
Sbjct: 145 LK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMAPERIDPSA 201
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924
+ DV+S G+ E+ G+ P + ++ + + + PP
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFP------YPKWN----SVFDQLTQVVKG--DPPQ 249
Query: 925 LEVGVEDK----LKSIIEVALSCVDANPERRPN 953
L E + + + C+ + +RP
Sbjct: 250 LSNSEEREFSPSFINFVN---LCLTKDESKRPK 279
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-28
Identities = 57/286 (19%), Positives = 114/286 (39%), Gaps = 39/286 (13%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G +V++ +GD A+K ++ + E + L + H+NIVK +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNN-ISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 756 --CSHARHSFLVYEYLERGSLA-RILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
+ RH L+ E+ GSL + A + S+ + V++ V ++++
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 813 IVHRDVSSKNVLLDFEYEAH----VSDFGTAKLLKPDSSNWSELAGTYGYVAPEL----- 863
IVHR++ N++ + ++DFG A+ L+ D + L GT Y+ P++
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAV 191
Query: 864 ---AYTMKVTEKCDVYSFGVLALEVIKGQHP--------------KDLLSSLSDSSLPGA 906
+ K D++S GV G P +++ ++ G
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV 251
Query: 907 NMNEAIDHMFDARLP-PPWLEVGVEDKLKSIIEVALSCVDANPERR 951
E + +P L G++ L ++ L +A+ E+
Sbjct: 252 QKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL---EADQEKC 294
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-28
Identities = 57/283 (20%), Positives = 108/283 (38%), Gaps = 38/283 (13%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-FLSEIKALTG 743
RS + +G+GG+ ++ + + + A K + HQ+E EI
Sbjct: 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS 71
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVN------VIKG 797
+ H+++V F+GF F+V E R SL + K + ++
Sbjct: 72 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR--------RKALTEPEARYYLRQ 123
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG 857
+ Y+H ++HRD+ N+ L+ + E + DFG A ++ D L GT
Sbjct: 124 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 180
Query: 858 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917
Y+APE+ + + DV+S G + ++ G+ P + S L I
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE------TSCLK--ETYLRI---KK 229
Query: 918 ARLP-PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
P + ++ +++ +P RP + +
Sbjct: 230 NEYSIPKHINPVAASLIQKMLQT-------DPTARPTINELLN 265
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 2e-28
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G YG V + + A+K + + T+ + L E+ L + H NI+K Y F
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 756 CSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
R+ +LV E + G L I+ E+D + +IK V ++Y+H IV
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLHKHN---IV 158
Query: 815 HRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
HRD+ +N+LL+ + + + DFG + + + E GT Y+APE+ K E
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKERLGTAYYIAPEV-LRKKYDE 216
Query: 872 KCDVYSFGVLALEVIKGQHP 891
KCDV+S GV+ ++ G P
Sbjct: 217 KCDVWSIGVILFILLAGYPP 236
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 2e-28
Identities = 88/373 (23%), Positives = 142/373 (38%), Gaps = 58/373 (15%)
Query: 614 SYKHVHRKWRTVLFTVLPLLAALALIIGLIGMFVCSQRRKKDSQEQEENNRNNQALLSIL 673
+ H R+ +V +L + L + + KK E N + +
Sbjct: 10 HHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLS 69
Query: 674 TY------EGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGD----TVAVKKLHS 723
+ V I +F+E IGRG +G VY L D AVK L+
Sbjct: 70 ALNPELVQAVQHVVIGPSSLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR 127
Query: 724 FTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS-FLVYEYLERGSLARILSSE- 781
T +FL+E + H N++ G C + S +V Y++ G L + +E
Sbjct: 128 ITDIGE-VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET 186
Query: 782 ---TATEMDWSKRVNVIKGVAHALSY---MHHECRPPIVHRDVSSKNVLLDFEYEAHVSD 835
T ++ + VA + + VHRD++++N +LD ++ V+D
Sbjct: 187 HNPTVKDL-----IGFGLQVAKGMKFLASKK------FVHRDLAARNCMLDEKFTVKVAD 235
Query: 836 FGTAKLLKPDSSNWSELAGTYGYV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGQ 889
FG A+ + D S T + A E T K T K DV+SFGVL E++ +G
Sbjct: 236 FGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 294
Query: 890 HPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANP 948
P P N + ++ RL P E + EV L C
Sbjct: 295 PP-----------YPDVNTFDITVYLLQGRRLLQP------EYCPDPLYEVMLKCWHPKA 337
Query: 949 ERRPN-MQIVCKL 960
E RP+ ++V ++
Sbjct: 338 EMRPSFSELVSRI 350
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-28
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 33/275 (12%)
Query: 697 IGRGGYGSVYKAEL--PSGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
IG G +G VYK L SG VA+K L + E + +FL E + H NI++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ-RVDFLGEAGIMGQFSHHNIIR 110
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G S + ++ EY+E G+L + L + E + V +++G+A + Y+ +
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMN-- 167
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV---APELAYTMK 868
VHRD++++N+L++ VSDFG +++L+ D +G + APE K
Sbjct: 168 -YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 869 VTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLE 926
T DV+SFG++ EV+ G+ P + +E + + D RLP P
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERP-----------YWELSNHEVMKAINDGFRLPTP--- 272
Query: 927 VGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
D +I ++ + C RRP IV L
Sbjct: 273 ---MDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-28
Identities = 68/276 (24%), Positives = 115/276 (41%), Gaps = 40/276 (14%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKAL-TGVRHRNIVKFY 753
+G G YG VYK + +G A+K + ++E EI L HRNI +Y
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDV---TGDEEEEIKQEINMLKKYSHHRNIATYY 87
Query: 754 G------FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
G +LV E+ GS+ ++ + + + + + LS++H
Sbjct: 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
++HRD+ +NVLL E + DFG + L + GT ++APE+
Sbjct: 148 HK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204
Query: 868 KVTE-----KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN--EAIDHMFDARL 920
+ + K D++S G+ A+E+ +G P P +M+ A+ + R
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGA-P------------PLCDMHPMRALFLI--PRN 249
Query: 921 PPPWLE-VGVEDKLKSIIEVALSCVDANPERRPNMQ 955
P P L+ K +S IE C+ N +RP +
Sbjct: 250 PAPRLKSKKWSKKFQSFIES---CLVKNHSQRPATE 282
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-28
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 687 SINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-FLSEIKALTGV 744
++ +F+ +G+G +G+VY A E S +A+K L E + E++ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY 804
RH NI++ YG+ A +L+ EY G++ R L + + + I +A+ALSY
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELANALSY 124
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
H + ++HRD+ +N+LL E ++DFG + SS ++L GT Y+ PE+
Sbjct: 125 CHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA--PSSRRTDLCGTLDYLPPEMI 179
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP-PP 923
EK D++S GVL E + G+ P + E + P
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE-----------ANTYQETYKRISRVEFTFPD 228
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
++ G D + ++ NP +RP ++
Sbjct: 229 FVTEGARDLISRLL-------KHNPSQRPMLR 253
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 2e-28
Identities = 65/292 (22%), Positives = 128/292 (43%), Gaps = 37/292 (12%)
Query: 674 TYEGKLVYEEIIRSIN---NFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETT 729
+ YE + R ++ ++ +G G +G VYKA +G A K + + + E
Sbjct: 1 SMRKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE- 59
Query: 730 HQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWS 789
++++ EI+ L H IVK G H +++ E+ G++ I+ E +
Sbjct: 60 -LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML-ELDRGLTEP 117
Query: 790 KRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849
+ V + + AL+++H + I+HRD+ + NVL+ E + ++DFG +
Sbjct: 118 QIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 174
Query: 850 SELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP 904
GT ++APE+ + + K D++S G+ +E+ + + P P
Sbjct: 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE-P------------P 221
Query: 905 GANMN--EAIDHMFDARLPPPWLEVGVE--DKLKSIIEVALSCVDANPERRP 952
+N + + A+ PP L + + + +++ +D NPE RP
Sbjct: 222 HHELNPMRVLLKI--AKSDPPTLLTPSKWSVEFRDFLKI---ALDKNPETRP 268
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 3e-28
Identities = 55/283 (19%), Positives = 109/283 (38%), Gaps = 38/283 (13%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-FLSEIKALTG 743
RS + +G+GG+ ++ + + + A K + HQ+E EI
Sbjct: 38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS 97
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVN------VIKG 797
+ H+++V F+GF F+V E R SL + K + ++
Sbjct: 98 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--------KALTEPEARYYLRQ 149
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG 857
+ Y+H ++HRD+ N+ L+ + E + DFG A ++ D L GT
Sbjct: 150 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 206
Query: 858 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917
Y+APE+ + + DV+S G + ++ G+ P + + + E +
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-----------TSCLKETYLRIKK 255
Query: 918 ARLP-PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
P + ++ +++ +P RP + +
Sbjct: 256 NEYSIPKHINPVAASLIQKMLQT-------DPTARPTINELLN 291
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 120 bits (301), Expect = 3e-28
Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 17/256 (6%)
Query: 78 FPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVL 137
FP F+ +L + + L + + +++ + I L N+ L
Sbjct: 15 FPDDAFAETIKDNLKKKSV--TDAVTQNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKL 70
Query: 138 HMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPS 197
+ N L I + +L +L L LD N + + +L L L L +N + S +
Sbjct: 71 FLNGNKLT-DIKPLTNLKNLGWLFLDENKIKDLSSLK--DLKKLKSLSLEHNGI--SDIN 125
Query: 198 SIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLS 257
+ +L L L+L N + + L KL L L +NQ+S I + L L +L
Sbjct: 126 GLVHLPQLESLYLGNNKIT--DITVLSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLY 181
Query: 258 LSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQ 317
LS+N + + +L+ L +L++L L+ + N + N++ P+
Sbjct: 182 LSKNHI--SDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL--VTPE 237
Query: 318 NICQSGSLQYFSVHDN 333
I G + +V +
Sbjct: 238 IISDDGDYEKPNVKWH 253
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 114 bits (285), Expect = 3e-26
Identities = 56/275 (20%), Positives = 101/275 (36%), Gaps = 18/275 (6%)
Query: 61 IISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHF 120
I NL S+ D + + + + N + + ++ I L + L L+ N
Sbjct: 23 TIKDNLKKKSVT---DAVTQNELNSIDQIIANNSDI-KSV-QGIQYLPNVTKLFLNGNKL 77
Query: 121 SGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSS 180
+ I + L NL L + N + + + L LK+L+L+ N + + +L
Sbjct: 78 T-DI-KPLTNLKNLGWLFLDENKIK-DLSSLKDLKKLKSLSLEHNGISDING--LVHLPQ 132
Query: 181 LVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240
L LYL NN + + + + L+ L L L+ N + L KL L LS N +S
Sbjct: 133 LESLYLGNNKI--TDITVLSRLTKLDTLSLEDNQISDI--VPLAGLTKLQNLYLSKNHIS 188
Query: 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN 300
+ + + LK L L L + + SNL + D L P+ I + +
Sbjct: 189 -DL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL--VTPEIISDDGD 244
Query: 301 LNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYF 335
+V + + + +
Sbjct: 245 YEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFH 279
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 108 bits (270), Expect = 2e-24
Identities = 53/292 (18%), Positives = 105/292 (35%), Gaps = 15/292 (5%)
Query: 102 SPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLA 161
P + NL + + L +++ + + + S+ I +L ++ L
Sbjct: 15 FPDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQGIQYLPNVTKLF 71
Query: 162 LDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPS 221
L+GN L P + NL +L L+L N + SS+ +L L L L+ N + +
Sbjct: 72 LNGNKLTDIKP--LTNLKNLGWLFLDENKI--KDLSSLKDLKKLKSLSLEHNGIS--DIN 125
Query: 222 SFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILH 281
+L +L L L NN+++ + L L LSL NQ+ + L+ L+ L+ L+
Sbjct: 126 GLVHLPQLESLYLGNNKITDITV--LSRLTKLDTLSLEDNQI--SDIVPLAGLTKLQNLY 181
Query: 282 LYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK 341
L N +S + + NL+ L + + + D +
Sbjct: 182 LSKNHIS--DLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEII 239
Query: 342 TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWN 393
+ V+ + +S F + ++ + +
Sbjct: 240 SDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKEVYT 291
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 98.6 bits (245), Expect = 2e-21
Identities = 50/264 (18%), Positives = 91/264 (34%), Gaps = 20/264 (7%)
Query: 343 LRNCTSLERVRLEKNQL--IGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGIL 400
+ L+K + ++ ++ + + + P + L
Sbjct: 17 DDAFAETIKDNLKKKSVTDAVTQNE----LNSIDQIIANNSDI--KSVQGIQYLPNVTKL 70
Query: 401 KIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIP 460
+ GN +T I P + N L L N + L+ +L L L L N +S I
Sbjct: 71 FLNGNKLTD-IKP-LTNLKNLGWLFLDENKIKDLSSLK--DLKKLKSLSLEHNGISD-IN 125
Query: 461 PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSEL 520
L L L L L N+ + + L KL L++ N+ S +P+ L +L L
Sbjct: 126 G-LVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVPLA--GLTKLQNL 180
Query: 521 DLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580
LS N + ++ + L++L+ L L + N+ ++ + L P
Sbjct: 181 YLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEI 238
Query: 581 SIEAFRHAPVEALQGNKGLCGEVS 604
+ + EVS
Sbjct: 239 ISDDGDYEKPNVKWHLPEFTNEVS 262
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 98.3 bits (244), Expect = 3e-21
Identities = 65/337 (19%), Positives = 118/337 (35%), Gaps = 68/337 (20%)
Query: 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
+ + + + P + +L + + T + + L+S++ + ++ +
Sbjct: 1 MGETITVSTPIKQIFPDD--AFAETIKDNLKKKSV--TDAVTQNELNSIDQIIANNSDIK 56
Query: 289 GHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTS 348
+ Q I N+ L + GN+ T P L N +
Sbjct: 57 -SV-QGIQYLPNVTKLFLNGNKLTDIKP--------------------------LTNLKN 88
Query: 349 LERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT 408
L + L++N+ I ++S +LK + +L L + N I+
Sbjct: 89 LGWLFLDENK-IKDLS-------SLK------------------DLKKLKSLSLEHNGIS 122
Query: 409 GGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTD 468
I + + QL L +N + L+ LT L+ L L NQ+S I P L LT
Sbjct: 123 D-ING-LVHLPQLESLYLGNNKI--TDITVLSRLTKLDTLSLEDNQISD-IVP-LAGLTK 176
Query: 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLR 528
L L LS N S + + L L L + S E + LV + + + L
Sbjct: 177 LQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLV 234
Query: 529 GEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGL 565
P I + EK N+ + + +F +
Sbjct: 235 --TPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPV 269
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 97.9 bits (243), Expect = 3e-21
Identities = 51/255 (20%), Positives = 90/255 (35%), Gaps = 40/255 (15%)
Query: 201 NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQ 260
+ + LKK + + L + ++ +N+ + S+ Q I L +T L L+
Sbjct: 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFLNG 74
Query: 261 NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320
N+L L+NL +L L L +N++ + + + L SLS+ N + +
Sbjct: 75 NKLTDI--KPLTNLKNLGWLFLDENKIK-DL-SSLKDLKKLKSLSLEHNGISDI--NGLV 128
Query: 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380
L+ + +N I + L T L+ + LE NQ I +I L+ LS
Sbjct: 129 HLPQLESLYLGNNK-ITDIT-VLSRLTKLDTLSLEDNQ-ISDIVP-LAGLTKLQNLYLSK 184
Query: 381 NKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELA 440
N I + + L L+ S + K +
Sbjct: 185 NH----------------ISDL----------RALAGLKNLDVLELFSQECLNKPINHQS 218
Query: 441 NLTSLNDLILNGNQL 455
NL N + L
Sbjct: 219 NLVVPNTVKNTDGSL 233
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 3e-28
Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 43/291 (14%)
Query: 677 GKLVYEEIIRSINNFD--ESF----CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETT 729
G L ++ D + F IG G +G+VY A ++ + + VA+KK+ ++
Sbjct: 36 GSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN 95
Query: 730 HQ-KEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDW 788
+ ++ + E++ L +RH N +++ G ++LV EY GS + +L +
Sbjct: 96 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEV-HKKPLQE 153
Query: 789 SKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG-TAKLLKPDSS 847
+ V G L+Y+H ++HRDV + N+LL + DFG + + +S
Sbjct: 154 VEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS- 209
Query: 848 NWSELAGTYGYVAPELAYTMKVTE---KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP 904
GT ++APE+ M + K DV+S G+ +E+ + + P P
Sbjct: 210 ----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK-P------------P 252
Query: 905 GANMN--EAIDHMFDARLPPPWLEVG-VEDKLKSIIEVALSCVDANPERRP 952
NMN A+ H+ A+ P L+ G + ++ ++ C+ P+ RP
Sbjct: 253 LFNMNAMSALYHI--AQNESPALQSGHWSEYFRNFVDS---CLQKIPQDRP 298
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 61/277 (22%), Positives = 106/277 (38%), Gaps = 39/277 (14%)
Query: 697 IGRGGYGSVYKAELPSGD-----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G+VYK VA+K+L T KE L E + V + ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYVMASVDNPHVCR 81
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G C L+ + + G L + + +N +A ++Y+
Sbjct: 82 LLGICL-TSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR-- 137
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-----APELAYT 866
+VHRD++++NVL+ ++DFG AKLL + E G V A E
Sbjct: 138 -LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE---KEYHAEGGKVPIKWMALESILH 193
Query: 867 MKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924
T + DV+S+GV E++ G P G +E + RLP P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKP-----------YDGIPASEISSILEKGERLPQP- 241
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ + + C + + RP +++ +
Sbjct: 242 -----PICTIDVYMIMVKCWMIDADSRPKFRELIIEF 273
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 4e-28
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 13/220 (5%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTN 133
+ P +L LDL+ N L + +L+ L+LS I L++
Sbjct: 19 FYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSH 77
Query: 134 LEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSL 191
L L + N + S+ LSSL+ L +L IG+L +L L + +N +
Sbjct: 78 LSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 136
Query: 192 PGSIPSS--IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT----KLELSNNQLSGSIPQ 245
S NL+NL +L L N ++ + L ++ L+LS N ++ I
Sbjct: 137 -QSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQP 194
Query: 246 EIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN 285
L +L+L NQL+ L+SL+ + L+ N
Sbjct: 195 GAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 7e-23
Identities = 60/261 (22%), Positives = 95/261 (36%), Gaps = 48/261 (18%)
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKL 252
IP ++ + L L N LR SF +L L+LS ++ +I +L
Sbjct: 21 KIPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSH 77
Query: 253 LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312
L+ L L+ N ++ + S LSSL+ L + L+ IG+ L L+V N
Sbjct: 78 LSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ 137
Query: 313 GFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPN 372
S + LP+ N T+LE + L N++ D +
Sbjct: 138 -----------SFK------------LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQ 174
Query: 373 LKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLV 432
+ L +LS L ++ N + I P +L EL +N L
Sbjct: 175 MPLLNLS--------------------LDLSLNPMN-FIQPGAFKEIRLKELALDTNQLK 213
Query: 433 GKVPLELANLTSLNDLILNGN 453
LTSL + L+ N
Sbjct: 214 SVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 18/220 (8%)
Query: 368 GIYPNLKLFDLSYNKFYGELSSN-WWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELD 425
+ + K DLS+N L S +++ P+L +L ++ I I + + L L
Sbjct: 25 NLPFSTKNLDLSFNPL-RHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLI 82
Query: 426 FSSNHLVGKVPLEL-ANLTSLNDLILNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSK-S 482
+ N + + L + L+SL L+ L+ + G L L L+++ N
Sbjct: 83 LTGNPI-QSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQSFK 140
Query: 483 IPGNMGYLLKLHYLNMSSNEFSQEIPIQ-LGKLVQL----SELDLSHNLLRGEIPPEICN 537
+P L L +L++SSN+ Q I L L Q+ LDLS N + I P
Sbjct: 141 LPEYFSNLTNLEHLDLSSNKI-QSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFK 198
Query: 538 LESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNELD 576
L++L L N L S+P F+ + L I + N D
Sbjct: 199 EIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 237
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 13/136 (9%)
Query: 65 NLTSTSLKG----TLDQFPFSLFSHLSYLDLNENQLYGNIPSP--IGNLTKLKFLNLSSN 118
+L +L+ FP L L++ N + + P NLT L+ L+LSSN
Sbjct: 101 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI-QSFKLPEYFSNLTNLEHLDLSSN 159
Query: 119 HFSGKIPSEI-GLLTNLEV----LHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPV 173
I +L + + L + +N +N P LK LALD N L
Sbjct: 160 KIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDG 218
Query: 174 SIGNLSSLVGLYLYNN 189
L+SL ++L+ N
Sbjct: 219 IFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKF----LNLSSNHFSGKIPSEIGLLTNL 134
FS ++L +LDL+ N++ +I L ++ L+LS N + I L
Sbjct: 145 FSNLTNLEHLDLSSNKI-QSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRL 202
Query: 135 EVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLD 168
+ L + N L S+P+ L+SL+ + L N D
Sbjct: 203 KELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 237
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 5e-28
Identities = 34/263 (12%), Positives = 70/263 (26%), Gaps = 54/263 (20%)
Query: 696 CIGRGGYGSVYKAELPSGDT-----VAVKKLHS-FTGETTHQKEFLSEIKALTGVRHRNI 749
G ++A DT VA+ + +E LS L+ + +
Sbjct: 38 FHGGVPPLQFWQAL----DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGV 93
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ +V E++ GSL + T + ++ +A A H
Sbjct: 94 ARVLDVVHTRAGGLVVAEWIRGGSLQEVA----DTSPSPVGAIRAMQSLAAAADAAH--- 146
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
R + V VS G L +
Sbjct: 147 RAGVALSIDHPSRVR--------VSIDGDVVL------------AYPATMPD-------A 179
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929
+ D+ G ++ + P L + S L A + P ++ +
Sbjct: 180 NPQDDIRGIGASLYALLVNRWP--LPEAGVRSGLAPAER-----DTAGQPIEPADIDRDI 232
Query: 930 EDKLKSIIEVALSCVDANPERRP 952
++ ++ ++ + R
Sbjct: 233 PFQISAVAARSVQ---GDGGIRS 252
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 8e-28
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G +G V K + + AVK ++ + + L E++ L + H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 756 CSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+ ++V E G L I+ + +E D ++ +IK V ++YMH IV
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 815 HRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
HRD+ +N+LL+ + + + DFG + + ++ + GT Y+APE+ E
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEV-LRGTYDE 201
Query: 872 KCDVYSFGV 880
KCDV+S GV
Sbjct: 202 KCDVWSAGV 210
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 8e-28
Identities = 74/283 (26%), Positives = 119/283 (42%), Gaps = 50/283 (17%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
IG G V A P + VA+K++ + T E L EI+A++ H NIV +Y
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVN------VIKGVAHALSYMHHE 808
+LV + L GS+ I+ A S ++ +++ V L Y+H
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA------GTYGYVAPE 862
+HRDV + N+LL + ++DFG + L + + GT ++APE
Sbjct: 141 ---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLA-TGGDITRNKVRKTFVGTPCWMAPE 196
Query: 863 L-----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN--EAIDHM 915
+ Y K D++SFG+ A+E+ G P + + M
Sbjct: 197 VMEQVRGY----DFKADIWSFGITAIELATG-AA------------PYHKYPPMKVL--M 237
Query: 916 FDARLPPPWLEVGVEDKL------KSIIEVALSCVDANPERRP 952
+ PP LE GV+DK KS ++ C+ +PE+RP
Sbjct: 238 LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 280
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 61/275 (22%), Positives = 105/275 (38%), Gaps = 47/275 (17%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIK-ALTGVRHRNIVKFYG 754
+GRG YG V K +PSG +AVK++ + T + QK L ++ ++ V V FYG
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRA-TVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYMHHECRPP 812
++ E ++ SL + + + + + AL ++H +
Sbjct: 74 ALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 130
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE--------LA 864
++HRDV NVL++ + + DFG + L D AG Y+APE
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLV-DDVAKDIDAGCKPYMAPERINPELNQKG 189
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-----R 919
Y++ K D++S G+ +E+ + P ++ F
Sbjct: 190 YSV----KSDIWSLGITMIELAILRFP-----------------YDSWGTPFQQLKQVVE 228
Query: 920 LPPPWLEVGV-EDKLKSIIEVALSCVDANPERRPN 953
P P L + C+ N + RP
Sbjct: 229 EPSPQLPADKFSAEFVDFTS---QCLKKNSKERPT 260
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 69/297 (23%), Positives = 115/297 (38%), Gaps = 48/297 (16%)
Query: 683 EIIRSINNFDESFCIGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEI 738
I IG+G +G VY E A+K L T + FL E
Sbjct: 15 LIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQ-VEAFLREG 73
Query: 739 KALTGVRHRNIVKFYGFCSHAR-HSFLVYEYLERGSLARILSSE----TATEMDWSKRVN 793
+ G+ H N++ G ++ Y+ G L + + S T ++ ++
Sbjct: 74 LLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-----IS 128
Query: 794 VIKGVAHALSYM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851
VA + Y+ VHRD++++N +LD + V+DFG A+ + D +S
Sbjct: 129 FGLQVARGMEYLAEQK-----FVHRDLAARNCMLDESFTVKVADFGLARDIL-DREYYSV 182
Query: 852 LAGTYGYV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPG 905
+ + A E T + T K DV+SFGVL E++ +G P
Sbjct: 183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP-----------YRH 231
Query: 906 ANMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ + + RLP P E S+ +V C +A+P RP +V ++
Sbjct: 232 IDPFDLTHFLAQGRRLPQP------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEV 282
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 2e-27
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 18/197 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK---KLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
IG+G + V + +G AVK + ++ E ++H +IV+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 753 YGFCSHARHSFLVYEYLERGSLA-RILSSETA----TEMDWSKRVNVIKGVAHALSYMHH 807
S ++V+E+++ L I+ A +E S + ++ + AL Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS---HYMRQILEALRYCHD 148
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
I+HRDV VLL + + + FG A L GT ++APE+
Sbjct: 149 NN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 865 YTMKVTEKCDVYSFGVL 881
+ DV+ GV+
Sbjct: 206 KREPYGKPVDVWGCGVI 222
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 63/277 (22%), Positives = 109/277 (39%), Gaps = 39/277 (14%)
Query: 697 IGRGGYGSVYKAELPSGD-----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G+V+K V +K + +G + + + A+ + H +IV+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS-FQAVTDHMLAIGSLDHAHIVR 79
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G C LV +YL GSL + + +N +A + Y+
Sbjct: 80 LLGLCP-GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG-- 135
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-----APELAYT 866
+VHR+++++NVLL + V+DFG A LL PD +L + A E +
Sbjct: 136 -MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD---KQLLYSEAKTPIKWMALESIHF 191
Query: 867 MKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924
K T + DV+S+GV E++ G P G + E D + RL P
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEP-----------YAGLRLAEVPDLLEKGERLAQP- 239
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ + V + C + RP ++ +
Sbjct: 240 -----QICTIDVYMVMVKCWMIDENIRPTFKELANEF 271
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G + V + +G A K +++ ++ E + ++H NIV+ +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 756 CSHARHSFLVYEYLERGSLA-RILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+LV++ + G L I++ E +E D S I+ + +++Y H IV
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESIAYCHSNG---IV 127
Query: 815 HRDVSSKNVLLDFEYE-AHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
HR++ +N+LL + + A V +DFG A + + W AGT GY++PE+ ++
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEVLKKDPYSK 186
Query: 872 KCDVYSFGV 880
D+++ GV
Sbjct: 187 PVDIWACGV 195
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 2e-27
Identities = 51/292 (17%), Positives = 102/292 (34%), Gaps = 50/292 (17%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKAL-TG 743
R F E IG G +GSV+K + G A+K+ + ++ L E+ A
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHA 801
+H ++V+++ + H + EY GSLA +S + + +++ V
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS-------------------DFGTAKLL 842
L Y+H +VH D+ N+ + + + D G +
Sbjct: 128 LRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI 184
Query: 843 KPDSSNWSELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS 901
S+ G ++A E L K D+++ + + +
Sbjct: 185 ----SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL---------- 230
Query: 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN 953
+ + RLP + + + +++ + +PERRP+
Sbjct: 231 ----PRNGDQWHEIRQGRLPR--IPQVLSQEFTELLK---VMIHPDPERRPS 273
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 2e-27
Identities = 52/275 (18%), Positives = 107/275 (38%), Gaps = 36/275 (13%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN--IVKFY 753
IG GG V++ A+K ++ + + +EI L ++ + I++ Y
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
+ ++ ++V E L L + + + K K + A+ +H I
Sbjct: 95 DYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG---I 148
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE--LAGTYGYVAPEL-------- 863
VH D+ N L+ + + DFG A ++PD+++ + GT Y+ PE
Sbjct: 149 VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 864 ---AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920
K++ K DV+S G + + G+ P + N + + D
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI----------INQISKLHAIIDPNH 257
Query: 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ + E L+ ++ C+ +P++R ++
Sbjct: 258 EIEFPD-IPEKDLQDVL---KCCLKRDPKQRISIP 288
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 2e-27
Identities = 57/213 (26%), Positives = 79/213 (37%), Gaps = 31/213 (14%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
L P L + L L+EN LY + + T+L LNL +
Sbjct: 22 LTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT------------- 68
Query: 135 EVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
+ G L L L L N L +P+ L +L L + N L S
Sbjct: 69 ------------KLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLT-S 114
Query: 195 IPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKL 252
+P L L L+LK N L+ P KL KL L+NN L+ +P + L+
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLEN 173
Query: 253 LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN 285
L L L +N L T+P L L+ N
Sbjct: 174 LDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 3e-21
Identities = 57/243 (23%), Positives = 88/243 (36%), Gaps = 44/243 (18%)
Query: 154 LSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKN 213
++S + D +L +P + L+L N L +++ + L L L +
Sbjct: 9 VASHLEVNCDKRNLTA-LPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 214 HLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSN 273
L G L L L+LS+NQL S+P L LT L +S N+L +L
Sbjct: 66 ELT--KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRG 122
Query: 274 LSSLEILHLYDNQLSGHIPQEI-GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHD 332
L L+ L+L N+L +P + L LS+ N T
Sbjct: 123 LGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLT-------------------- 161
Query: 333 NYFIGSLPK-TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNW 391
LP L +L+ + L++N L I G + + L L N
Sbjct: 162 -----ELPAGLLNGLENLDTLLLQENSL-YTIPK--GFFGSHLLPFAF-------LHGNP 206
Query: 392 WNC 394
W C
Sbjct: 207 WLC 209
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 3e-17
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLG 470
+PP++ T L S N L L T L L L+ +L+ G L LG
Sbjct: 25 LPPDLPKDTT--ILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT--KLQVDGTLPVLG 80
Query: 471 YLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHNLLRG 529
LDLS N+ S+P L L L++S N +P+ L +L EL L N L+
Sbjct: 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL-TSLPLGALRGLGELQELYLKGNELK- 137
Query: 530 EIPPEIC-NLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNEL 575
+PP + LEKL+L++NNL+ +P + L ++ + N L
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 8e-17
Identities = 55/236 (23%), Positives = 87/236 (36%), Gaps = 39/236 (16%)
Query: 342 TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILK 401
+ S V +K L + + + + LS N Y + +L L
Sbjct: 5 EVSKVASHLEVNCDKRNL-TALPP--DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 402 IAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPP 461
+ +T G L LD S N L +PL L +L L ++ N+L+ +P
Sbjct: 62 LDRAELT--KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTS-LPL 117
Query: 462 ELGL---LTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS 518
G L +L L L N K++P + L +L
Sbjct: 118 --GALRGLGELQELYLKGNEL-KTLPPGL-----------------------LTPTPKLE 151
Query: 519 ELDLSHNLLRGEIPPEIC-NLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573
+L L++N L E+P + LE+L+ L L N+L +IP F H L + N
Sbjct: 152 KLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 1e-13
Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 59/251 (23%)
Query: 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
++ L+ ++P ++ K T L LS+N L ++L + L L+L +L+
Sbjct: 12 HLEVNCDKRNLT-ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT 68
Query: 289 GHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTS 348
+ G L +L + NQ SLP + +
Sbjct: 69 -KLQ-VDGTLPVLGTLDLSHNQLQ-------------------------SLPLLGQTLPA 101
Query: 349 LERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT 408
L + + N+ + ++ +L L + GN +
Sbjct: 102 LTVLDVSFNR-LTSLPLG--------ALR---------------GLGELQELYLKGNELK 137
Query: 409 GGIPPEI-GNATQLHELDFSSNHLVGKVPLEL-ANLTSLNDLILNGNQLSGGIPPELGLL 466
+PP + +L +L ++N+L ++P L L +L+ L+L N L IP
Sbjct: 138 T-LPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGS 194
Query: 467 TDLGYLDLSAN 477
L + L N
Sbjct: 195 HLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 3e-13
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Query: 441 NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500
+ S ++ + L+ +PP L D L LS N + +L LN+
Sbjct: 8 KVASHLEVNCDKRNLTA-LPP--DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDR 64
Query: 501 NEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-F 559
E ++ + G L L LDLSHN L+ +P L +L L++S N L+ S+P
Sbjct: 65 AEL-TKLQV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGAL 120
Query: 560 ENMHGLLSIDISYNEL 575
+ L + + NEL
Sbjct: 121 RGLGELQELYLKGNEL 136
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 2e-27
Identities = 57/286 (19%), Positives = 114/286 (39%), Gaps = 39/286 (13%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G +V++ +GD A+K ++ + E + L + H+NIVK +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNN-ISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 756 --CSHARHSFLVYEYLERGSLA-RILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
+ RH L+ E+ GSL + A + S+ + V++ V ++++
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 813 IVHRDVSSKNVLLDFEYEAH----VSDFGTAKLLKPDSSNWSELAGTYGYVAPEL----- 863
IVHR++ N++ + ++DFG A+ L+ D + L GT Y+ P++
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYLHPDMYERAV 191
Query: 864 ---AYTMKVTEKCDVYSFGVLALEVIKGQHP--------------KDLLSSLSDSSLPGA 906
+ K D++S GV G P +++ ++ G
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV 251
Query: 907 NMNEAIDHMFDARLPPP-WLEVGVEDKLKSIIEVALSCVDANPERR 951
E + +P L G++ L ++ L +A+ E+
Sbjct: 252 QKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL---EADQEKC 294
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-27
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G + V+ + +G A+K + +EI L ++H NIV
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIK--KSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 756 CSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
H +LV + + G L RIL TE D S VI+ V A+ Y+H IV
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHENG---IV 128
Query: 815 HRDVSSKNVLL-DFEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
HRD+ +N+L E + + +DFG +K+ + S GT GYVAPE+ ++
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQN--GIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 872 KCDVYSFGV 880
D +S GV
Sbjct: 187 AVDCWSIGV 195
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 3e-27
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK-----KLHSFTGETTHQKE--FLSEIKALTGV-RHR 747
+GRG V + P+ AVK SF+ E + L E+ L V H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMH 806
NI++ FLV++ +++G L + T +E + K +++ + + +H
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK---IMRALLEVICALH 141
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAY 865
IVHRD+ +N+LLD + ++DFG + L P E+ GT Y+APE +
Sbjct: 142 KLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREVCGTPSYLAPEIIEC 197
Query: 866 TMKV-----TEKCDVYSFGV 880
+M ++ D++S GV
Sbjct: 198 SMNDNHPGYGKEVDMWSTGV 217
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 4e-27
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 23/276 (8%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-FLSEIKALTG 743
I +F +G+G + VY+A + +G VA+K + + +E+K
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALS 803
++H +I++ Y + + + +LV E G + R L + + R + + + +
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGML 126
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL 863
Y+H I+HRD++ N+LL ++DFG A LK L GT Y++PE+
Sbjct: 127 YLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI 183
Query: 864 AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
A + DV+S G + ++ G+ P D ++ N + D + P
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFD------TDTVK--NTLNKVVLA-DYEM-PS 233
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
+L + +D + ++ NP R ++ V
Sbjct: 234 FLSIEAKDLIHQLL-------RRNPADRLSLSSVLD 262
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 4e-27
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-FLSEIKALTGVRHRNIVKFYG 754
+G+G +G V + +G AVK + + KE L E++ L + H NI+K Y
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 755 FCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
F + +LV E G L I+S + +E+D ++ +I+ V ++YMH I
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKNK---I 147
Query: 814 VHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT 870
VHRD+ +N+LL+ + + + DFG + + + GT Y+APE+
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIAPEV-LHGTYD 205
Query: 871 EKCDVYSFGVLALEVIKGQHP 891
EKCDV+S GV+ ++ G P
Sbjct: 206 EKCDVWSTGVILYILLSGCPP 226
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 113 bits (283), Expect = 5e-27
Identities = 41/297 (13%), Positives = 89/297 (29%), Gaps = 41/297 (13%)
Query: 675 YEGKLVYEEIIRSINNFDESFCI----GRGGYGSVYKAE------LPSGDTVAVKKLHSF 724
++ KL + + + G G + VY+A + +K
Sbjct: 47 WQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQ--- 103
Query: 725 TGETTHQKEF---LSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL--- 778
+ + EF ++ L +KFY S LV E G+L +
Sbjct: 104 --KPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLY 161
Query: 779 SSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH------ 832
+ M ++ + + + +H I+H D+ N +L +
Sbjct: 162 KNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDL 218
Query: 833 -----VSDFGTAKLLK--PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 885
+ D G + +K P + ++ T G+ E+ + D + +
Sbjct: 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCM 278
Query: 886 IKGQHP---KDLLSSLSDSSLPGANMNEAIDHMFDARL-PPPWLEVGVEDKLKSIIE 938
+ G + + + + + F L P + D L+ ++
Sbjct: 279 LFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 6e-27
Identities = 76/284 (26%), Positives = 118/284 (41%), Gaps = 50/284 (17%)
Query: 697 IGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
IGRG +G VY L D AVK L+ T +FL+E + H N++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFSHPNVLSL 91
Query: 753 YGFCSHARHS-FLVYEYLERGSLARILSSE----TATEMDWSKRVNVIKGVAHALSY--- 804
G C + S +V Y++ G L + +E T ++ + VA + Y
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 146
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV----- 859
VHRD++++N +LD ++ V+DFG A+ + D +S T +
Sbjct: 147 KK------FVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPVKWM 199
Query: 860 APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918
A E T K T K DV+SFGVL E++ +G P P N + ++
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-----------YPDVNTFDITVYLLQG 248
Query: 919 -RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
RL P E + EV L C E RP+ ++V ++
Sbjct: 249 RRLLQP------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 286
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 6e-27
Identities = 29/291 (9%), Positives = 70/291 (24%), Gaps = 50/291 (17%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+ G V+ ++ + A+K + + A + + +
Sbjct: 70 LRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARD 129
Query: 755 FCSHAR--------------------------HSFLVYEYLERGSLARILS-----SETA 783
+ L+ L + S
Sbjct: 130 RRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFR 188
Query: 784 TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843
+ + + + + + +VH + N+ + + + D
Sbjct: 189 GDEGILALHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSAL---W 242
Query: 844 PDSSNWSELAGTYGYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS 901
+ + Y E A T T + + G+ V P L++
Sbjct: 243 KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG 302
Query: 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
S ++ P + D +K++I L + + RR
Sbjct: 303 SWKRPSLRVPGTDSLAFGSCTP-----LPDFVKTLIGRFL---NFDRRRRL 345
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 6e-27
Identities = 45/189 (23%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G+G + V + +G A K +++ ++ E + ++H NIV+ +
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 756 CSHARHSFLVYEYLERGSLA-RILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+LV++ + G L I++ E +E D S + I+ + +++Y H IV
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYCHSNG---IV 150
Query: 815 HRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
HR++ +N+LL + + ++DFG A + + W AGT GY++PE+ ++
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEVLKKDPYSK 209
Query: 872 KCDVYSFGV 880
D+++ GV
Sbjct: 210 PVDIWACGV 218
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 7e-27
Identities = 52/277 (18%), Positives = 106/277 (38%), Gaps = 40/277 (14%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH--RNIVKFY 753
IG GG V++ A+K ++ + + +EI L ++ I++ Y
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
+ ++ ++V E L L + + + K K + A+ +H I
Sbjct: 76 DYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG---I 129
Query: 814 VHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSE--LAGTYGYVAPEL------ 863
VH D+ N L+ + + DFG A ++PD+++ + GT Y+ PE
Sbjct: 130 VHSDLKPANFLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 864 -----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918
K++ K DV+S G + + G+ P + N + + D
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----------NQISKLHAIIDP 236
Query: 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ + E L+ ++ C+ +P++R ++
Sbjct: 237 NHEIEFPD-IPEKDLQDVL---KCCLKRDPKQRISIP 269
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 1e-26
Identities = 63/281 (22%), Positives = 108/281 (38%), Gaps = 31/281 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY-- 753
+G GG+G V + +G+ VA+K+ ++ + EI+ + + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER-WCLEIQIMKKLNHPNVVSAREV 80
Query: 754 ----GFCSHARHSFLVYEYLERGSLA-RILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
+ L EY E G L + E + ++ ++ AL Y+H
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY 865
I+HRD+ +N++L + + D G AK L +E GT Y+APEL
Sbjct: 141 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELLE 196
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHP-----------KDLLSSLSDSSLPGANMNEAIDH 914
K T D +SFG LA E I G P + ++ + ++ A+
Sbjct: 197 QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKF 256
Query: 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
P L + KL+ ++ L + +R
Sbjct: 257 SSV-LPTPNHLSGILAGKLERWLQCML---MWHQRQRGTDP 293
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 1e-26
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 24/202 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK-----------KLHSFTGETTHQKEFLSEIKALTGV 744
+G G YG V E A+K +E +EI L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALS 803
H NI+K + ++ +LV E+ E G L +I++ E D + ++K + +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN---IMKQILSGIC 160
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVA 860
Y+H IVHRD+ +N+LL+ + + DFG + D + GT Y+A
Sbjct: 161 YLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRLGTAYYIA 216
Query: 861 PELAYTMKVTEKCDVYSFGVLA 882
PE K EKCDV+S GV+
Sbjct: 217 PE-VLKKKYNEKCDVWSCGVIM 237
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-26
Identities = 58/191 (30%), Positives = 84/191 (43%), Gaps = 17/191 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYG 754
+G G + K S AVK + + EI AL H NIVK +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII-----SKRMEANTQKEITALKLCEGHPNIVKLHE 73
Query: 755 FCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
H+FLV E L G L RI + +E + S +++ + A+S+MH +
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY---IMRKLVSAVSHMHDVG---V 127
Query: 814 VHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT 870
VHRD+ +N+L E + + DFG A+L PD+ T Y APEL
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYD 187
Query: 871 EKCDVYSFGVL 881
E CD++S GV+
Sbjct: 188 ESCDLWSLGVI 198
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 2e-26
Identities = 51/275 (18%), Positives = 105/275 (38%), Gaps = 36/275 (13%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH--RNIVKFY 753
IG GG V++ A+K ++ + + +EI L ++ I++ Y
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
+ ++ ++V E L L + + + K K + A+ +H I
Sbjct: 123 DYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG---I 176
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE--LAGTYGYVAPEL-------- 863
VH D+ N L+ + + DFG A ++PD+++ + G Y+ PE
Sbjct: 177 VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR 235
Query: 864 ---AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920
K++ K DV+S G + + G+ P + N + + D
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI----------INQISKLHAIIDPNH 285
Query: 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ + E L+ ++ C+ +P++R ++
Sbjct: 286 EIEFPD-IPEKDLQDVL---KCCLKRDPKQRISIP 316
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-26
Identities = 58/277 (20%), Positives = 104/277 (37%), Gaps = 32/277 (11%)
Query: 687 SINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKAL-TGV 744
IN+ + +G G G V+K +G +AVK++ +G K L ++ +
Sbjct: 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR-RSGNKEENKRILMDLDVVLKSH 81
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY 804
IV+ +G F+ E + + + + + + AL Y
Sbjct: 82 DCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGK--MTVAIVKALYY 139
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
+ + ++HRDV N+LLD + + DFG + L D AG Y+APE
Sbjct: 140 LKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRSAGCAAYMAPERI 196
Query: 865 YTMKVTE-----KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD-A 918
T+ + DV+S G+ +E+ GQ P N + +
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPY-------------KNCKTDFEVLTKVL 243
Query: 919 RLPPPWLEVGVE--DKLKSIIEVALSCVDANPERRPN 953
+ PP L + +S ++ C+ + +RP
Sbjct: 244 QEEPPLLPGHMGFSGDFQSFVK---DCLTKDHRKRPK 277
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 3e-26
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 22/199 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK-----KLHSFTGETTHQKEFL-SEIKALTGVR-HRN 748
IGRG V + +G AVK + +E E L V H +
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
I+ + FLV++ + +G L + +E + +++ + A+S++H
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRS---IMRSLLEAVSFLHA 218
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYT 866
IVHRD+ +N+LLD + +SDFG + L+P EL GT GY+APE L +
Sbjct: 219 NN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-LRELCGTPGYLAPEILKCS 274
Query: 867 MKVTEK-----CDVYSFGV 880
M T D+++ GV
Sbjct: 275 MDETHPGYGKEVDLWACGV 293
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 4e-26
Identities = 62/277 (22%), Positives = 114/277 (41%), Gaps = 41/277 (14%)
Query: 697 IGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
IG G +G V++ S + VA+K + T ++ +++FL E + H +IVK
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVKL 81
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYM-HHECRP 811
G + +++ E G L L +D + + ++ AL+Y+
Sbjct: 82 IGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRF-- 137
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-----APELAYT 866
VHRD++++NVL+ + DFG ++ ++ + + G + APE
Sbjct: 138 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS----TYYKASKGKLPIKWMAPESINF 191
Query: 867 MKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924
+ T DV+ FGV E++ G P G N+ I + + RLP P
Sbjct: 192 RRFTSASDVWMFGVCMWEILMHGVKP-----------FQGVKNNDVIGRIENGERLPMP- 239
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ ++ + C +P RRP ++ +L
Sbjct: 240 -----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 271
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 5e-26
Identities = 58/286 (20%), Positives = 103/286 (36%), Gaps = 59/286 (20%)
Query: 697 IGRGGYGSVYKAEL--PSGDT--VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G +G VY+ G+ VAVK +++F+SE + + H +IVK
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN-KEKFMSEAVIMKNLDHPHIVKL 78
Query: 753 YGFCSHARHS-FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYM--HHEC 809
G +++ E G L L + V + A++Y+ +
Sbjct: 79 IGIIE--EEPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESIN-- 133
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV---------- 859
VHRD++ +N+L+ + DFG ++ ++ + Y
Sbjct: 134 ---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED-----------YYKASVTRLPIK 179
Query: 860 --APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916
+PE + T DV+ F V E++ G+ P + I +
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP-----------FFWLENKDVIGVLE 228
Query: 917 DA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
RLP P + + + C D +P RP ++VC L
Sbjct: 229 KGDRLPKP------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 6e-26
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 22/199 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLH------SFTGETTHQKEFLSEIKALTGVRHRNI 749
+G G G V A E + VA++ + E +EI+ L + H I
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 750 VKFYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
+K F A ++V E +E G L +++ ++ E + A+ Y+H
Sbjct: 203 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFYQMLLAVQYLHEN 258
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LA 864
I+HRD+ +NVLL + E ++DFG +K+L S L GT Y+APE L
Sbjct: 259 G---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLV 314
Query: 865 YTMKV--TEKCDVYSFGVL 881
D +S GV+
Sbjct: 315 SVGTAGYNRAVDCWSLGVI 333
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 7e-26
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+GRG VY+ + + A+K L T +K +EI L + H NI+K
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKK----TVDKKIVRTEIGVLLRLSHPNIIKLKEI 116
Query: 756 CSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
LV E + G L RI+ +E D + +K + A++Y+H IV
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD---AVKQILEAVAYLHENG---IV 170
Query: 815 HRDVSSKNVLL-DFEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
HRD+ +N+L +A + +DFG +K+++ + GT GY APE+
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL-MKTVCGTPGYCAPEILRGCAYGP 229
Query: 872 KCDVYSFGV 880
+ D++S G+
Sbjct: 230 EVDMWSVGI 238
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 8e-26
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK-----KLHSFTGETTHQKE-FLSEIKALTGVRHRNI 749
+G G G V A E + VA+K K + +EI+ L + H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 750 VKFYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
+K F A ++V E +E G L +++ ++ E + A+ Y+H
Sbjct: 78 IKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFYQMLLAVQYLHEN 133
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LA 864
I+HRD+ +NVLL + E ++DFG +K+L S L GT Y+APE L
Sbjct: 134 G---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLV 189
Query: 865 YTMKV--TEKCDVYSFGV 880
D +S GV
Sbjct: 190 SVGTAGYNRAVDCWSLGV 207
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 8e-26
Identities = 70/311 (22%), Positives = 119/311 (38%), Gaps = 63/311 (20%)
Query: 680 VYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGD---TVAVKKLHSFTGETTHQKEFLS 736
+Y + + F + IG G +G V KA + A+K++ + + H ++F
Sbjct: 18 IYPVLDWNDIKFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAG 74
Query: 737 EIKALTGV-RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVI 795
E++ L + H NI+ G C H + +L EY G+L L E D + +
Sbjct: 75 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 134
Query: 796 KG--------------VAHALSY---MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838
VA + Y +HRD++++N+L+ Y A ++DFG
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQ------FIHRDLAARNILVGENYVAKIADFGL 188
Query: 839 AKLLKPDSSNWSELAGTYGYV-----APE-LAYTMKVTEKCDVYSFGVLALEVI-KGQHP 891
++ + T G + A E L Y+ T DV+S+GVL E++ G P
Sbjct: 189 SR----GQEVYV--KKTMGRLPVRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTP 241
Query: 892 KDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPER 950
G E + + RL P + + ++ C P
Sbjct: 242 -----------YCGMTCAELYEKLPQGYRLEKP------LNCDDEVYDLMRQCWREKPYE 284
Query: 951 RPN-MQIVCKL 960
RP+ QI+ L
Sbjct: 285 RPSFAQILVSL 295
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 9e-26
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 21/192 (10%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IGRG +G V A + + A KK+ F EI+ + + H NI++ Y
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIP--KYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 756 CSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+LV E G L R++ E D ++ ++K V A++Y H +
Sbjct: 75 FEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVLSAVAYCHKL---NVA 128
Query: 815 HRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPEL---AYTMK 868
HRD+ +N L + + DFG A KP GT YV+P++ Y
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVLEGLY--- 184
Query: 869 VTEKCDVYSFGV 880
+CD +S GV
Sbjct: 185 -GPECDEWSAGV 195
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-25
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 19/192 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKAL-TGVRHRNIVKFYG 754
IG G Y + + AVK + +++ EI+ L +H NI+
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIID------KSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 755 FCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
++ ++V E ++ G L +IL + +E + S V+ + + Y+H + +
Sbjct: 84 VYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA---VLFTITKTVEYLHAQG---V 137
Query: 814 VHRDVSSKNVLLDFEYEAH----VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
VHRD+ N+L E + DFG AK L+ ++ T +VAPE+
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGY 197
Query: 870 TEKCDVYSFGVL 881
CD++S GVL
Sbjct: 198 DAACDIWSLGVL 209
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 1e-25
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 30/273 (10%)
Query: 687 SINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVK---KLHSFTGETTHQKEFLSEIKALT 742
+I++FD +G+G +G+VY A E + +A+K K HQ EI+ +
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ--LRREIEIQS 69
Query: 743 GVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHAL 802
+RH NI++ Y + + +L+ E+ RG L + L + S ++ +A AL
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT--FMEELADAL 127
Query: 803 SYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE 862
Y H ++HRD+ +N+L+ ++ E ++DFG + P + + GT Y+ PE
Sbjct: 128 HYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSV-HAPSLRRRT-MCGTLDYLPPE 182
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922
+ EK D++ GVL E + G P D S + I ++ D + P
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD------SPSHT--ETHRRIVNV-DLKF-P 232
Query: 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
P+L G +D + ++ +P +R ++
Sbjct: 233 PFLSDGSKDLISKLL-------RYHPPQRLPLK 258
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 66/289 (22%), Positives = 109/289 (37%), Gaps = 52/289 (17%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G VY+ ++ VAVK L E + +FL E ++ H+NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-ELDFLMEALIISKFNHQNIV 96
Query: 751 KFYGFCSHARHSFLVYEYLERGSL-----ARILSSETATEMDWSKRVNVIKGVAHALSYM 805
+ G + F++ E + G L + + ++V + +A Y+
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 806 --HHECRPPIVHRDVSSKNVLLDFEYEAHV---SDFGTAKLLKPDSSNWSELAGTYGYV- 859
+H +HRD++++N LL V DFG A+ + S G +
Sbjct: 157 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS---YYRKGGCAMLP 208
Query: 860 ----APE-LAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAID 913
PE T K D +SFGVL E+ G P P + E ++
Sbjct: 209 VKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMP-----------YPSKSNQEVLE 256
Query: 914 HMFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ R+ PP + I+ C PE RPN I+ ++
Sbjct: 257 FVTSGGRMDPP---KNCPGPVYRIM---TQCWQHQPEDRPNFAIILERI 299
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 1e-25
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 19/197 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK---KLHSFTGETTHQKE-FLSEIKALTGVRHRNIVK 751
+G G + V K + +G A K K + +E E+ L +RH NI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 752 FYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+ + L+ E + G L + E+ TE + + +K + + Y+H +
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT---QFLKQILDGVHYLHSKR- 128
Query: 811 PPIVHRDVSSKNVLL-DFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAY 865
I H D+ +N++L D + DFG A ++ + + + GT +VAPE + Y
Sbjct: 129 --IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNY 185
Query: 866 TMKVTEKCDVYSFGVLA 882
+ + D++S GV+
Sbjct: 186 E-PLGLEADMWSIGVIT 201
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 60/288 (20%), Positives = 116/288 (40%), Gaps = 49/288 (17%)
Query: 697 IGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G+G +GSV +A+L D VAVK L + ++ +EFL E + H ++ K
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 753 YGFCS------HARHSFLVYEYLERGSLARILSSETATEMDWS----KRVNVIKGVAHAL 802
G ++ +++ G L L + E ++ V + +A +
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 803 SYM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV- 859
Y+ + +HRD++++N +L + V+DFG ++ + G +
Sbjct: 151 EYLSSRN-----FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD---YYRQGCASKLP 202
Query: 860 ----APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDH 914
A E T DV++FGV E++ +GQ P G E ++
Sbjct: 203 VKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP-----------YAGIENAEIYNY 251
Query: 915 MFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ RL P +++ ++ C A+P++RP+ + +L
Sbjct: 252 LIGGNRLKQP---PECMEEVYDLM---YQCWSADPKQRPSFTCLRMEL 293
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 62/290 (21%), Positives = 110/290 (37%), Gaps = 47/290 (16%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYG 754
+ GG+ VY+A+ + SG A+K+L + E + + E+ + + H NIV+F
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRL--LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 755 FCSHARHS-------FLVYEYLERGSLARIL-SSETATEMDWSKRVNVIKGVAHALSYMH 806
S + FL+ L +G L L E+ + + + A+ +MH
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA------------G 854
+PPI+HRD+ +N+LL + + DFG+A +
Sbjct: 154 R-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 855 TYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911
T Y PE+ + EK D+++ G + + QHP +
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE-----------DGAKLRI 261
Query: 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
++ + PP S+I + + NPE R ++ V L
Sbjct: 262 VNGKYS---IPPHDTQY--TVFHSLIR---AMLQVNPEERLSIAEVVHQL 303
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 19/197 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK---KLHSFTGETTHQKE-FLSEIKALTGVRHRNIVK 751
+G G + V K E +G A K K S +E E+ L V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 752 FYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+ + L+ E + G L + E+ +E + + + IK + ++Y+H +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQILDGVNYLHTKK- 135
Query: 811 PPIVHRDVSSKNVLLDFEYEAH----VSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAY 865
I H D+ +N++L + + DFG A ++ + + GT +VAPE + Y
Sbjct: 136 --IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNY 192
Query: 866 TMKVTEKCDVYSFGVLA 882
+ + D++S GV+
Sbjct: 193 E-PLGLEADMWSIGVIT 208
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-25
Identities = 65/289 (22%), Positives = 108/289 (37%), Gaps = 52/289 (17%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G VY+ ++ VAVK L E + +FL E ++ H+NIV
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD-ELDFLMEALIISKFNHQNIV 137
Query: 751 KFYGFCSHARHSFLVYEYLERGSL-----ARILSSETATEMDWSKRVNVIKGVAHALSYM 805
+ G + F++ E + G L + + ++V + +A Y+
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 806 --HHECRPPIVHRDVSSKNVLLDFEYEAHV---SDFGTAKLLKPDSSNWSELAGTYGYV- 859
+H +HRD++++N LL V DFG A+ + G +
Sbjct: 198 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG---YYRKGGCAMLP 249
Query: 860 ----APE-LAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAID 913
PE T K D +SFGVL E+ G P P + E ++
Sbjct: 250 VKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMP-----------YPSKSNQEVLE 297
Query: 914 HMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ R+ PP + I+ C PE RPN I+ ++
Sbjct: 298 FVTSGGRMDPP---KNCPGPVYRIM---TQCWQHQPEDRPNFAIILERI 340
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-25
Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 22/246 (8%)
Query: 649 SQRRKKDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESF------CIGRGGY 702
+ ++ R + + I + + + + +G G +
Sbjct: 43 WSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRF 102
Query: 703 GSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761
G V+K E +G +A K + T ++E +EI + + H N+++ Y
Sbjct: 103 GQVHKCEETATGLKLAAKIIK--TRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKND 160
Query: 762 SFLVYEYLERGSL-ARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVS 819
LV EY++ G L RI+ TE+D + +K + + +MH I+H D+
Sbjct: 161 IVLVMEYVDGGELFDRIIDESYNLTELD---TILFMKQICEGIRHMHQM---YILHLDLK 214
Query: 820 SKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTMKVTEKCDVY 876
+N+L + DFG A+ KP GT ++APE + Y V+ D++
Sbjct: 215 PENILCVNRDAKQIKIIDFGLARRYKPR-EKLKVNFGTPEFLAPEVVNYD-FVSFPTDMW 272
Query: 877 SFGVLA 882
S GV+A
Sbjct: 273 SVGVIA 278
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 2e-25
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK---KLHSFTGETTHQKEFL-SEIKALTGVRHRNIVK 751
+G G + V K E +G A K K S +E + E+ L V H NI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 752 FYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+ + L+ E + G L + E+ +E + + + IK + ++Y+H +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQILDGVNYLHTKK- 135
Query: 811 PPIVHRDVSSKNVLLDFEYEAH----VSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAY 865
I H D+ +N++L + + DFG A ++ + + GT +VAPE + Y
Sbjct: 136 --IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNY 192
Query: 866 TMKVTEKCDVYSFGVLA 882
+ + D++S GV+
Sbjct: 193 E-PLGLEADMWSIGVIT 208
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-25
Identities = 49/238 (20%), Positives = 96/238 (40%), Gaps = 18/238 (7%)
Query: 651 RRKKDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKA-E 709
R K D + + ++ + + + V + + + E +G G +G V++ E
Sbjct: 15 RGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEE--LGSGAFGVVHRCVE 72
Query: 710 LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769
+G K +++ + +EI + + H ++ + L+ E+L
Sbjct: 73 KATGRVFVAKFINTPYPLD--KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130
Query: 770 ERGSL-ARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827
G L RI + + +E + +N ++ L +MH IVH D+ +N++ +
Sbjct: 131 SGGELFDRIAAEDYKMSEAE---VINYMRQACEGLKHMHEH---SIVHLDIKPENIMCET 184
Query: 828 EYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLA 882
+ + V DFG A L PD T + APE + V D+++ GVL
Sbjct: 185 KKASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEIVDREP-VGFYTDMWAIGVLG 240
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-25
Identities = 65/287 (22%), Positives = 109/287 (37%), Gaps = 48/287 (16%)
Query: 697 IGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G +GSV + L D VAVK + +EFLSE + H N+++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 753 YGFCS-----HARHSFLVYEYLERGSLARIL----SSETATEMDWSKRVNVIKGVAHALS 803
G C ++ +++ G L L + + + +A +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 804 YM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-- 859
Y+ + +HRD++++N +L + V+DFG +K + G +
Sbjct: 162 YLSNRN-----FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD---YYRQGRIAKMPV 213
Query: 860 ---APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHM 915
A E T K DV++FGV E+ +G P PG +E D++
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP-----------YPGVQNHEMYDYL 262
Query: 916 FD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
RL P ED L + E+ SC +P RP + +L
Sbjct: 263 LHGHRLKQP------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQL 303
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 2e-25
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK---KLHSFTGETTHQKEFL-SEIKALTGVRHRNIVK 751
+G G + V K E +G A K K + + +E + E+ L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 752 FYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+ + L+ E + G L + E+ TE + + +K + + + Y+H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLHSLQ- 134
Query: 811 PPIVHRDVSSKNVLL-DFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAY 865
I H D+ +N++L D + DFG A + + + + GT +VAPE + Y
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 866 TMKVTEKCDVYSFGVLA 882
+ + D++S GV+
Sbjct: 192 E-PLGLEADMWSIGVIT 207
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 8e-25
Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G +G V++ E +G+ A K + T + ++ EI+ ++ +RH +V +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVM--TPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 756 CSHARHSFLVYEYLERGSL-ARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
++YE++ G L ++ +E + V ++ V L +MH
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDE---AVEYMRQVCKGLCHMHEN---NY 276
Query: 814 VHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTE 871
VH D+ +N++ + + DFG L P + GT + APE+A V
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAEGKPVGY 335
Query: 872 KCDVYSFGVLA 882
D++S GVL+
Sbjct: 336 YTDMWSVGVLS 346
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 1e-24
Identities = 62/277 (22%), Positives = 114/277 (41%), Gaps = 41/277 (14%)
Query: 697 IGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
IG G +G V++ S + VA+K + T ++ +++FL E + H +IVK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVKL 456
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH-HECRP 811
G + +++ E G L L +D + + ++ AL+Y+
Sbjct: 457 IGVIT-ENPVWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTALAYLESKRF-- 512
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-----APELAYT 866
VHRD++++NVL+ + DFG ++ ++ + + G + APE
Sbjct: 513 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS----TYYKASKGKLPIKWMAPESINF 566
Query: 867 MKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924
+ T DV+ FGV E++ G P G N+ I + + RLP P
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKP-----------FQGVKNNDVIGRIENGERLPMP- 614
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ ++ + C +P RRP ++ +L
Sbjct: 615 -----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-24
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 17/192 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+GRG +G V++ E S T K + + T Q EI L RHRNI+ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVK---VKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 756 CSHARHSFLVYEYLERGSL-ARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
+++E++ + RI +S E + V+ + V AL ++H I
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTSAFELNERE---IVSYVHQVCEALQFLHSH---NI 123
Query: 814 VHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTMKVT 870
H D+ +N++ + + +FG A+ LKP N+ L Y APE + + V+
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQHDV-VS 181
Query: 871 EKCDVYSFGVLA 882
D++S G L
Sbjct: 182 TATDMWSLGTLV 193
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 58/294 (19%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G V+ AE + VAVK L + +++F E + LT ++H++IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIV 106
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR-------------VNVIKG 797
+F+G C+ R +V+EY+ G L R L S + + V
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 798 VAHALSYM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGT 855
VA + Y+ H VHRD++++N L+ + DFG ++ + G
Sbjct: 167 VAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD---YYRVGG 218
Query: 856 YGYV-----APE-LAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANM 908
+ PE + Y K T + DV+SFGV+ E+ G+ P +
Sbjct: 219 RTMLPIRWMPPESILYR-KFTTESDVWSFGVVLWEIFTYGKQP-----------WYQLSN 266
Query: 909 NEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
EAID + L P ++ +I+ C P++R + + +L
Sbjct: 267 TEAIDCITQGRELERP---RACPPEVYAIM---RGCWQREPQQRHSIKDVHARL 314
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-24
Identities = 54/288 (18%), Positives = 112/288 (38%), Gaps = 47/288 (16%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G+G +G VY+ VA+K ++ + EFL+E + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE-RIEFLNEASVMKEFNCHHVV 91
Query: 751 KFYGFCSHARHSFLVYEYLERGSL--------ARILSSETATEMDWSKRVNVIKGVAHAL 802
+ G S + + ++ E + RG L + ++ SK + + +A +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 803 SYMH-HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-- 859
+Y++ ++ VHRD++++N ++ ++ + DFG + + G G +
Sbjct: 152 AYLNANKF----VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD---YYRKGGKGLLPV 204
Query: 860 ---APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHM 915
+PE T DV+SFGV+ E+ + P G + + + +
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-----------YQGLSNEQVLRFV 253
Query: 916 FD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ L P D L ++ C NP+ RP+ + +
Sbjct: 254 MEGGLLDKP---DNCPDMLFELM---RMCWQYNPKMRPSFLEIISSIK 295
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-24
Identities = 62/334 (18%), Positives = 119/334 (35%), Gaps = 52/334 (15%)
Query: 655 DSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGD 714
S + +N +N L+ E + IN++ + +G + + E
Sbjct: 4 GSMKDILSNYSNLIYLNKYVKEKD-------KYINDYRIIRTLNQGKFNKIILCE-KDNK 55
Query: 715 TVAVKKLH---------------SFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA 759
A+KK + +F +E++ +T +++ + G ++
Sbjct: 56 FYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY 115
Query: 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRV------NVIKGVAHALSYMHHECRPPI 813
+++YEY+E S+ + + +++ + +IK V ++ SY+H+E I
Sbjct: 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--I 173
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT--E 871
HRDV N+L+D +SDFG ++ + GTY ++ PE
Sbjct: 174 CHRDVKPSNILMDKNGRVKLSDFGESEYMV--DKKIKGSRGTYEFMPPEFFSNESSYNGA 231
Query: 872 KCDVYSFGVLALEVIKGQHPKDLLSSLS---------DSSLP-GANMNEAIDHMFDARLP 921
K D++S G+ + P L SL + P N +
Sbjct: 232 KVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCS 291
Query: 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+L D LK + NP R +
Sbjct: 292 NNFLSNEDIDFLKLFLRK-------NPAERITSE 318
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 71/297 (23%), Positives = 121/297 (40%), Gaps = 59/297 (19%)
Query: 697 IGRGGYGSVYKAELPSGD--------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHR 747
+G G +G V AE D TVAVK L E + +SE++ + + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHK 101
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG---------- 797
NI+ G C+ +++ EY +G+L L + M++S +N +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 798 ----VAHALSYM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851
+A + Y+ +HRD++++NVL+ ++DFG A+ +
Sbjct: 162 CTYQLARGMEYLASQK-----CIHRDLAARNVLVTENNVMKIADFGLARDINNID---YY 213
Query: 852 LAGTYGYV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPG 905
T G + APE + T + DV+SFGVL E+ G P PG
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP-----------YPG 262
Query: 906 ANMNEAIDHMFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ E + + R+ P ++L ++ C A P +RP Q+V L
Sbjct: 263 IPVEELFKLLKEGHRMDKP---ANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 313
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 3e-24
Identities = 69/293 (23%), Positives = 116/293 (39%), Gaps = 50/293 (17%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNI 749
+G G +G V +A TVAVK L T ++ +SE+K L+ + H NI
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREALMSELKVLSYLGNHMNI 89
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY----- 804
V G C+ + ++ EY G L L + + + +++ AL
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 805 --------MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY 856
M +HRD++++N+LL + DFG A+ +K DS+ +
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY---VVKGN 206
Query: 857 GYV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNE 910
+ APE + T + DV+S+G+ E+ G P PG ++
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-----------YPGMPVDS 255
Query: 911 AIDHMFDA--RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
M R+ P ++ I+ +C DA+P +RP QIV +
Sbjct: 256 KFYKMIKEGFRMLSP---EHAPAEMYDIM---KTCWDADPLKRPTFKQIVQLI 302
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 3e-24
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 20/194 (10%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G +G V+ E SG +K ++ + ++ +EI+ L + H NI+K +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQ-IEAEIEVLKSLDHPNIIKIFEV 88
Query: 756 CSHARHSFLVYEYLERGSL-ARILSSETA----TEMDWSKRVNVIKGVAHALSYMHHECR 810
+ ++V E E G L RI+S++ +E ++ ++K + +AL+Y H +
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAE---LMKQMMNALAYFHSQ-- 143
Query: 811 PPIVHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYT 866
+VH+D+ +N+L + DFG A+L K D + AGT Y+APE
Sbjct: 144 -HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH-STNAAGTALYMAPEVFKR- 200
Query: 867 MKVTEKCDVYSFGV 880
VT KCD++S GV
Sbjct: 201 -DVTFKCDIWSAGV 213
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 60/303 (19%), Positives = 99/303 (32%), Gaps = 40/303 (13%)
Query: 266 TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSL 325
V S +L D + +I ++L L+V + + +
Sbjct: 35 DVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALR---- 90
Query: 326 QYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNI--SDDFGIYPNLKLFDLSYNKF 383
+ + L+ + LE ++ G P+L + +L +
Sbjct: 91 -----------------VLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSW 133
Query: 384 YGELSSNW----WNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLEL 439
+ W P L +L IA + ++ L LD S N +G+ L
Sbjct: 134 ATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193
Query: 440 A----NLTSLNDLILNGNQ---LSGGIPPELGLLTDLGYLDLSANRFSKSIP-GNMGYLL 491
A +L L L SG L LDLS N + + +
Sbjct: 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253
Query: 492 KLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNL 551
+L+ LN+S ++P L +LS LDLS+N L P L + L+L N
Sbjct: 254 QLNSLNLSFTGLK-QVPKGLPA--KLSVLDLSYNRLDR--NPSPDELPQVGNLSLKGNPF 308
Query: 552 SGS 554
S
Sbjct: 309 LDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 7e-24
Identities = 52/222 (23%), Positives = 77/222 (34%), Gaps = 20/222 (9%)
Query: 83 FSHLSYLDLNENQLYGNIPSPIGNLT--KLKFLNLSSNHFSGKIPS----EIGLLTNLEV 136
S L L L ++ G P P+ T L LNL + ++ + + L L+V
Sbjct: 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKV 153
Query: 137 LHMFVNHLNG-SIPEIGHLSSLKNLALDGNHLDGPIPVSI----GNLSSLVGLYLYNN-- 189
L + H S ++ +L L L N G + +L L L N
Sbjct: 154 LSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM 213
Query: 190 -SLPGSIPSSIGNLSNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQEI 247
+ G + L L L N LR S + +L L LS L +P+ +
Sbjct: 214 ETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272
Query: 248 GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289
L+ L LS N+L S L + L L N
Sbjct: 273 --PAKLSVLDLSYNRLDRN--PSPDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 97.3 bits (242), Expect = 4e-22
Identities = 59/276 (21%), Positives = 81/276 (29%), Gaps = 34/276 (12%)
Query: 342 TLRNCTSLERVRLEKN--------QLIGNISDDFGIYPNLKLFDLSYNKFYGELSSN--- 390
+ NC V L + + +D +K L +
Sbjct: 26 SAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRIL 85
Query: 391 -----WWNCPQLGILKIAGNNITGGIPPEIGNAT--QLHELDFSSNHLVGKVP----LEL 439
L L + +TG PP + AT L+ L+ + + L+
Sbjct: 86 FGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQ 145
Query: 440 ANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSI-------PGNMGYLLK 492
L L + ++ + L LDLS N P L
Sbjct: 146 WLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQV 205
Query: 493 LHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEIC-NLESLEKLNLSHNNL 551
L N S VQL LDLSHN LR C L LNLS L
Sbjct: 206 LALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL 265
Query: 552 SGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRH 587
+P L +D+SYN LD PS +
Sbjct: 266 K-QVPKGLP--AKLSVLDLSYNRLDR-NPSPDELPQ 297
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 86.9 bits (215), Expect = 1e-18
Identities = 54/275 (19%), Positives = 81/275 (29%), Gaps = 22/275 (8%)
Query: 152 GHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS---IGNLSNLVYL 208
G S L D I SL L + +P I + +S L L
Sbjct: 41 GGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQEL 100
Query: 209 FLKKNHLRGPIPSSFG--YLRKLTKLELSNNQLSG--SIPQEIGNLKL--LTDLSLSQNQ 262
L+ + G P L L L N + + E+ L LS++Q
Sbjct: 101 TLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAH 160
Query: 263 LRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI----GNFMNLNSLSVGGNQFT---GFL 315
+ +L L L DN G F L L++ G
Sbjct: 161 SLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVC 220
Query: 316 PQNICQSGSLQYFSVHDNYFIGSLPKTL-RNCTSLERVRLEKNQLIGNISDDFGIYPNLK 374
LQ + N + + L + L L G+ L
Sbjct: 221 SALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL---KQVPKGLPAKLS 277
Query: 375 LFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITG 409
+ DLSYN+ + + + PQ+G L + GN
Sbjct: 278 VLDLSYNRL--DRNPSPDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 5e-10
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 6/107 (5%)
Query: 65 NLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGK 123
N + G + L LDL+ N L +P ++L LNLS +
Sbjct: 210 NAGMETPSGVCSAL-AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-Q 267
Query: 124 IPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGP 170
+P GL L VL + N L+ P L + NL+L GN
Sbjct: 268 VPK--GLPAKLSVLDLSYNRLD-RNPSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 27/156 (17%), Positives = 48/156 (30%), Gaps = 9/156 (5%)
Query: 448 LILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLL---KLHYLNMSSNEFS 504
L + G ++ L L + A R I +L L L + + E +
Sbjct: 49 LKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT 108
Query: 505 QEIPIQLGKLV--QLSELDLSHNLLRGEIPP----EICNLESLEKLNLSHNNLSGSIPTN 558
P L + L+ L+L + + L+ L+++ +
Sbjct: 109 GTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQ 168
Query: 559 FENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQ 594
L ++D+S N G I A LQ
Sbjct: 169 VRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQ 204
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 7e-24
Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 55/295 (18%)
Query: 697 IGRGGYGSVYKAELPSGD--------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHR 747
+G G +G V AE D VAVK L S E + +SE++ + + +H+
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD-LSDLISEMEMMKMIGKHK 135
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG---------- 797
NI+ G C+ +++ EY +G+L L + +++S +
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 798 ----VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA 853
VA + Y+ + +HRD++++NVL+ + ++DFG A+ +
Sbjct: 196 CAYQVARGMEYL--ASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID---YYKK 249
Query: 854 GTYGYV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGAN 907
T G + APE + T + DV+SFGVL E+ G P PG
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP-----------YPGVP 298
Query: 908 MNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ E + + R+ P ++L ++ C A P +RP Q+V L
Sbjct: 299 VEELFKLLKEGHRMDKP---SNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 347
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 7e-24
Identities = 70/298 (23%), Positives = 117/298 (39%), Gaps = 56/298 (18%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G V KA TVAVK L + ++ LSE L V H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-LRDLLSEFNVLKQVNHPHVI 89
Query: 751 KFYGFCSHARHSFLVYEYLERGSL------ARILSSETATEMDWSKRVNVIKGVAHALSY 804
K YG CS L+ EY + GSL +R + ++ AL+
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 805 -------------MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851
M + +VHRD++++N+L+ + +SDFG ++ + + S
Sbjct: 150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY--- 206
Query: 852 LAGTYGYV-----APE-LAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLP 904
+ + G + A E L T + DV+SFGVL E++ G +P P
Sbjct: 207 VKRSQGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNP-----------YP 254
Query: 905 GANMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
G + + R+ P +++ ++ L C P++RP I L
Sbjct: 255 GIPPERLFNLLKTGHRMERP---DNCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 1e-23
Identities = 60/191 (31%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 100 IPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSSL 157
IPS I K L+L SN S LT L +L++ N L ++P L +L
Sbjct: 31 IPSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNL 87
Query: 158 KNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKKNHL 215
+ L + N L +P+ + L +L L L N L S+P + +L+ L YL L N L
Sbjct: 88 ETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQL-KSLPPRVFDSLTKLTYLSLGYNEL 145
Query: 216 RGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNL 274
+ F L L +L L NNQL +P+ L L L L NQL+ + +L
Sbjct: 146 QSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSL 204
Query: 275 SSLEILHLYDN 285
L++L L +N
Sbjct: 205 EKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 4e-21
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 109 KLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNH 166
++ SS + IPS + + + L + N L+ S+P L+ L+ L L+ N
Sbjct: 17 NKNSVDCSSKKLTA-IPS--NIPADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNK 72
Query: 167 LDGPIPVSI-GNLSSLVGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFG 224
L +P I L +L L++ +N L ++P + L NL L L +N L+ P F
Sbjct: 73 LQT-LPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFD 130
Query: 225 YLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLY 283
L KLT L L N+L S+P+ + L L +L L NQL+ + L+ L+ L L
Sbjct: 131 SLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLD 189
Query: 284 DNQLSGHIPQEIGNFMNLNSLS 305
+NQL +P+ G F +L L
Sbjct: 190 NNQLKR-VPE--GAFDSLEKLK 208
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 3e-19
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKL 252
+IPS+I ++ L L+ N L +F L KL L L++N+L ++P I LK
Sbjct: 30 AIPSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKN 86
Query: 253 LTDLSLSQNQLRGTVPSSL-SNLSSLEILHLYDNQLSGHIPQEI-GNFMNLNSLSVGGNQ 310
L L ++ N+L+ +P + L +L L L NQL +P + + L LS+G N+
Sbjct: 87 LETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNE 144
Query: 311 FTGFLPQNICQS-GSLQYFSVHDNYFIGSLPK-TLRNCTSLERVRLEKNQLIGNISDDFG 368
LP+ + SL+ +++N + +P+ T L+ ++L+ NQL + +
Sbjct: 145 LQ-SLPKGVFDKLTSLKELRLYNN-QLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEG-- 199
Query: 369 IYPNLKLFDLSYNKFYGELSSNWWNCPQLGIL 400
FD +L N W+C GI+
Sbjct: 200 ------AFDSLEKLKMLQLQENPWDCTCNGII 225
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 3e-14
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEL-GLLTDL 469
IP I T+ +LD SN L LT L L LN N+L +P + L +L
Sbjct: 31 IPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNL 87
Query: 470 GYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHNLL 527
L ++ N+ +++P + L+ L L + N+ + +P ++ L +L+ L L +N L
Sbjct: 88 ETLWVTDNKL-QALPIGVFDQLVNLAELRLDRNQL-KSLPPRVFDSLTKLTYLSLGYNEL 145
Query: 528 RGEIPPEIC-NLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNEL 575
+ +P + L SL++L L +N L +P F+ + L ++ + N+L
Sbjct: 146 Q-SLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQL 193
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 6e-14
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 399 ILKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLEL-ANLTSLNDLILNGNQLS 456
L + N ++ +P + T+L L + N L +P + L +L L + N+L
Sbjct: 41 KLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ 98
Query: 457 GGIPPEL-GLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKL 514
+P + L +L L L N+ P L KL YL++ NE Q +P + KL
Sbjct: 99 A-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL-QSLPKGVFDKL 156
Query: 515 VQLSELDLSHNLLRGEIPPEIC-NLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISY 572
L EL L +N L+ +P L L+ L L +N L +P F+++ L + +
Sbjct: 157 TSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQE 214
Query: 573 NELD 576
N D
Sbjct: 215 NPWD 218
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 40/210 (19%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK-----KLHSFTGETTHQKEFLSEIKALTGVR-HRNI 749
+G G + V L + AVK H + E++ L + HRN+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHI-------RSRVFREVEMLYQCQGHRNV 73
Query: 750 VKFYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
++ F +LV+E + GS+ + I E++ S V++ VA AL ++H++
Sbjct: 74 LELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNK 130
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVS-----DFGTAKLLKPDSS-------NWSELAGTY 856
I HRD+ +N+L E+ VS DF +K + G+
Sbjct: 131 G---IAHRDLKPENIL--CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 857 GYVAPE-----LAYTMKVTEKCDVYSFGVL 881
Y+APE ++CD++S GV+
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-23
Identities = 39/300 (13%), Positives = 94/300 (31%), Gaps = 67/300 (22%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSE----IKALTGVRH----- 746
+G+ + +A +G++ V + ++ + + E ++ L G+++
Sbjct: 86 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 145
Query: 747 --------------RNIVKFYGFCSHARHSFLVYEYL-------ERGSLARILSSETATE 785
K R +++ + + +L S ++T
Sbjct: 146 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 205
Query: 786 --MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843
+ R+ + V L+ +HH +VH + +++LD ++ F +
Sbjct: 206 KSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLV--R 260
Query: 844 PDSSNWSELAGTYG---YVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLL 895
+S S + + A + +T D ++ G+ + P
Sbjct: 261 DGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNT-- 318
Query: 896 SSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
D + G +E I +P P +++++E L E R
Sbjct: 319 ----DDAALG--GSEWI-FRSCKNIPQP---------VRALLEGFL---RYPKEDRLLPL 359
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-23
Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 59/297 (19%)
Query: 697 IGRGGYGSVYKAELPSGD--------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHR 747
+G G +G V AE D TVAVK L E + +SE++ + + +H+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHK 147
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG---------- 797
NI+ G C+ +++ EY +G+L L + M++S +N +
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 798 ----VAHALSYM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851
+A + Y+ +HRD++++NVL+ ++DFG A+ +
Sbjct: 208 CTYQLARGMEYLASQK-----CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY--- 259
Query: 852 LAGTYGYV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPG 905
T G + APE + T + DV+SFGVL E+ G P PG
Sbjct: 260 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP-----------YPG 308
Query: 906 ANMNEAIDHMFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ E + + R+ P + + + C A P +RP Q+V L
Sbjct: 309 IPVEELFKLLKEGHRMDKP------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 70/301 (23%), Positives = 118/301 (39%), Gaps = 71/301 (23%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G +G V+ AE + VAVK L T +K+F E + LT ++H +IV
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA--RKDFQREAELLTNLQHEHIV 80
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR--------------VNVIK 796
KFYG C +V+EY++ G L + L + M +++
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 797 GVAHALSYM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL------KPDSSN 848
+A + Y+ H VHRD++++N L+ + DFG ++ + +
Sbjct: 141 QIASGMVYLASQH-----FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 849 -----WSELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDS 901
W PE + Y K T + DV+SFGV+ E+ G+ P
Sbjct: 196 MLPIRWM---------PPESIMYR-KFTTESDVWSFGVILWEIFTYGKQP---------- 235
Query: 902 SLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCK 959
+ E I+ + L P ++ ++ L C P++R N +I
Sbjct: 236 -WFQLSNTEVIECITQGRVLERP---RVCPKEVYDVM---LGCWQREPQQRLNIKEIYKI 288
Query: 960 L 960
L
Sbjct: 289 L 289
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 56/246 (22%), Positives = 97/246 (39%), Gaps = 18/246 (7%)
Query: 61 IISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHF 120
I NL S+ D + + + + N + + ++ I L + L L+ N
Sbjct: 26 TIKDNLKKKSVT---DAVTQNELNSIDQIIANNSDI-KSV-QGIQYLPNVTKLFLNGNKL 80
Query: 121 SGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSS 180
+ I + L NL L + N + + + L LK+L+L+ N + + +L
Sbjct: 81 T-DI-KPLANLKNLGWLFLDENKVK-DLSSLKDLKKLKSLSLEHNGISDING--LVHLPQ 135
Query: 181 LVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240
L LYL NN + + + + L+ L L L+ N + L KL L LS N +S
Sbjct: 136 LESLYLGNNKI--TDITVLSRLTKLDTLSLEDNQISDI--VPLAGLTKLQNLYLSKNHIS 191
Query: 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN 300
+ + + LK L L L + + SNL + D L P+ I + +
Sbjct: 192 -DL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT--PEIISDDGD 247
Query: 301 LNSLSV 306
+V
Sbjct: 248 YEKPNV 253
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 2e-18
Identities = 46/235 (19%), Positives = 85/235 (36%), Gaps = 20/235 (8%)
Query: 343 LRNCTSLERVRLEKNQL--IGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGIL 400
+ L+K + ++ ++ + + + P + L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVTQNE----LNSIDQIIANNSDI--KSVQGIQYLPNVTKL 73
Query: 401 KIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIP 460
+ GN +T I P + N L L N + L+ +L L L L N +S I
Sbjct: 74 FLNGNKLTD-IKP-LANLKNLGWLFLDENKVKDLSSLK--DLKKLKSLSLEHNGISD-IN 128
Query: 461 PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSEL 520
L L L L L N+ + + L KL L++ N+ S +P+ L +L L
Sbjct: 129 G-LVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVPLA--GLTKLQNL 183
Query: 521 DLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
LS N + ++ + L++L+ L L + N+ ++ + L
Sbjct: 184 YLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL 236
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 4e-17
Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 22/259 (8%)
Query: 197 SSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDL 256
S + + LKK + + L + ++ +N+ + S+ Q I L +T L
Sbjct: 18 FSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKL 73
Query: 257 SLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLP 316
L+ N+L L+NL +L L L +N++ + + + L SLS+ N +
Sbjct: 74 FLNGNKLTDI--KPLANLKNLGWLFLDENKVK-DL-SSLKDLKKLKSLSLEHNGISDI-- 127
Query: 317 QNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLF 376
+ L+ + +N I + L T L+ + LE NQ I +I L+
Sbjct: 128 NGLVHLPQLESLYLGNNK-ITDI-TVLSRLTKLDTLSLEDNQ-ISDIVP-LAGLTKLQNL 183
Query: 377 DLSYNKF--YGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGK 434
LS N L+ L +L++ N + + + LV
Sbjct: 184 YLSKNHISDLRALA----GLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLV-- 237
Query: 435 VPLELANLTSLNDLILNGN 453
P +++ + +
Sbjct: 238 TPEIISDDGDYEKPNVKWH 256
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 2e-13
Identities = 49/234 (20%), Positives = 85/234 (36%), Gaps = 20/234 (8%)
Query: 342 TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELS--SNWWNCPQLGI 399
T S++++ + I ++ PN+ L+ NK L+ N LG
Sbjct: 41 TQNELNSIDQIIANNSD-IKSVQG-IQYLPNVTKLFLNGNK----LTDIKPLANLKNLGW 94
Query: 400 LKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGI 459
L + N + + + + +L L N + L +L L L L N+++ I
Sbjct: 95 LFLDENKVKD-LSS-LKDLKKLKSLSLEHNGI--SDINGLVHLPQLESLYLGNNKITD-I 149
Query: 460 PPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSE 519
L LT L L L N+ S I + L KL L +S N S ++ L L L
Sbjct: 150 TV-LSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDV 204
Query: 520 LDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573
L+L + NL + + +L P + ++ ++
Sbjct: 205 LELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT--PEIISDDGDYEKPNVKWH 256
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 7/165 (4%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
L L L N + + + + +L +L+ L L +N + I + + LT L+ L
Sbjct: 107 SLKDLKKLKSLSLEHNGI--SDINGLVHLPQLESLYLGNNKIT-DI-TVLSRLTKLDTLS 162
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS 198
+ N ++ I + L+ L+NL L NH+ ++ L +L L L++ +
Sbjct: 163 LEDNQIS-DIVPLAGLTKLQNLYLSKNHISDLRALA--GLKNLDVLELFSQECLNKPINH 219
Query: 199 IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243
NL + L P S + ++ + + +
Sbjct: 220 QSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEV 264
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 17/195 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR-NIVKFYG 754
+GRG + V + +G A K L + E L EI L + ++ +
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 755 FCSHARHSFLVYEYLERGSL-ARILS--SETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
+ L+ EY G + + L +E +E D +IK + + Y+H
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVI---RLIKQILEGVYYLHQNN-- 151
Query: 812 PIVHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTM 867
IVH D+ +N+LL Y + DFG ++ + E+ GT Y+APE L Y
Sbjct: 152 -IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEYLAPEILNYD- 208
Query: 868 KVTEKCDVYSFGVLA 882
+T D+++ G++A
Sbjct: 209 PITTATDMWNIGIIA 223
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 6e-23
Identities = 51/236 (21%), Positives = 83/236 (35%), Gaps = 53/236 (22%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVK---KLHSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
IG+G YG V A E + A+K K + +E++ + + H NI +
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 753 YGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRV------------------- 792
Y ++ LV E G L ++ + + V
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 793 ------------------NVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV- 833
N+++ + AL Y+H++ I HRD+ +N L +
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIK 210
Query: 834 -SDFGTAKLLKP----DSSNWSELAGTYGYVAPEL--AYTMKVTEKCDVYSFGVLA 882
DFG +K + + AGT +VAPE+ KCD +S GVL
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 7e-23
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 71/302 (23%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNI 749
+G G +G V +A VAVK L S ++ +SE+K ++ + +H NI
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE-KEALMSELKIMSHLGQHENI 112
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARIL-SSETATEMDWSKRVN--------------- 793
V G C+H ++ EY G L L E D + +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 794 VIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA 853
V +G+A L+ + +HRDV+++NVLL + A + DFG A+ + DS+
Sbjct: 173 VAQGMAF-LASKN------CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN------ 219
Query: 854 GTYGYV------------APELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS 901
Y+ APE + T + DV+S+G+L E+ SL +
Sbjct: 220 ----YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----------SLGLN 265
Query: 902 SLPGANMNEAIDHMFDA--RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
PG +N + ++ P + SI+ +C P RP Q +C
Sbjct: 266 PYPGILVNSKFYKLVKDGYQMAQP---AFAPKNIYSIM---QACWALEPTHRPTFQQICS 319
Query: 960 LL 961
L
Sbjct: 320 FL 321
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 1e-22
Identities = 62/299 (20%), Positives = 111/299 (37%), Gaps = 66/299 (22%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G +G VYK L VA+K L ++EF E ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL-REEFRHEAMLRARLQHPNVV 75
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR--------------VNVIK 796
G + + +++ Y G L L + S V+++
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 797 GVAHALSYM--HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG 854
+A + Y+ HH +VH+D++++NVL+ + +SD G + + A
Sbjct: 136 QIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREV--------YAAD 182
Query: 855 TY-----GYV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSL 903
Y + APE K + D++S+GV+ EV G P
Sbjct: 183 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP-----------Y 231
Query: 904 PGANMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
G + + ++ + + LP P +D + + + C + P RRP I +L
Sbjct: 232 CGYSNQDVVEMIRNRQVLPCP------DDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 1e-22
Identities = 76/352 (21%), Positives = 134/352 (38%), Gaps = 66/352 (18%)
Query: 650 QRRKKDSQEQEENNRNNQALLSILTYEGKLVYE-----EIIRSINNFDESFCIGRGGYGS 704
+++ + Q + + + + Y YE E R F + +G G +G
Sbjct: 3 YKKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKV--LGSGAFGK 60
Query: 705 VYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCS 757
V A VAVK L + ++ +SE+K +T + H NIV G C+
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSE-REALMSELKMMTQLGSHENIVNLLGACT 119
Query: 758 HARHSFLVYEYLERGSL------ARILSSETATEMDWSKRVNVIKG-------------- 797
+ +L++EY G L R SE E + KR+ +
Sbjct: 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 179
Query: 798 -VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY 856
VA + ++ E + VHRD++++NVL+ + DFG A+ + DS + +
Sbjct: 180 QVAKGMEFL--EFK-SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS---NYVVRGN 233
Query: 857 GYV-----APELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911
+ APE + T K DV+S+G+L E+ SL + PG ++
Sbjct: 234 ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF----------SLGVNPYPGIPVDAN 283
Query: 912 IDHMFDA--RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+ ++ P + I + SC + +RP+ + L
Sbjct: 284 FYKLIQNGFKMDQP------FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 2e-22
Identities = 67/297 (22%), Positives = 111/297 (37%), Gaps = 54/297 (18%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
IG G +G V++A P VAVK L Q +F E + + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM-QADFQREAALMAEFDNPNIV 113
Query: 751 KFYGFCSHARHSFLVYEYLERGSL------ARILSSETATEMDWSKRVNVIKGVAHALSY 804
K G C+ + L++EY+ G L + + + D S R V LS
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 805 -------------MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE 851
M + VHRD++++N L+ ++DFG ++ + S+++ +
Sbjct: 174 AEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI--YSADYYK 231
Query: 852 LAGTYGYV-----APE-LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905
A + PE + Y + T + DV+++GV+ E+ S G
Sbjct: 232 -ADGNDAIPIRWMPPESIFYN-RYTTESDVWAYGVVLWEIF----------SYGLQPYYG 279
Query: 906 ANMNEAIDHMFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
E I ++ D L P E+ + + C P RP+ I L
Sbjct: 280 MAHEEVIYYVRDGNILACP------ENCPLELYNLMRLCWSKLPADRPSFCSIHRIL 330
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 2e-22
Identities = 33/186 (17%), Positives = 68/186 (36%), Gaps = 9/186 (4%)
Query: 78 FPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVL 137
P S F L ++ + L ++ L++ + + + + I N++ L
Sbjct: 17 IPDSTFKAYLNGLLGQSS---TANITEAQMNSLTYITLANINVT-DL-TGIEYAHNIKDL 71
Query: 138 HMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPS 197
+ H + I LS+L+ L + G + ++ L+SL L + +++ SI +
Sbjct: 72 TINNIHAT-NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILT 130
Query: 198 SIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLS 257
I L + + L N I L +L L + + + I + L L
Sbjct: 131 KINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLY 187
Query: 258 LSQNQL 263
+
Sbjct: 188 AFSQTI 193
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 2e-21
Identities = 25/163 (15%), Positives = 58/163 (35%), Gaps = 8/163 (4%)
Query: 154 LSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKN 213
+ N L + ++ ++SL + L N ++ + + I N+ L +
Sbjct: 22 FKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINV-TDL-TGIEYAHNIKDLTINNI 76
Query: 214 HLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSN 273
H + L L +L + ++ + L LT L +S + ++ + ++
Sbjct: 77 HATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINT 134
Query: 274 LSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLP 316
L + + L N I + L SL++ + +
Sbjct: 135 LPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDYRG 176
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 3e-19
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 7/161 (4%)
Query: 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNG 452
L + +A N+T + I A + +L ++ H P+ + L++L L + G
Sbjct: 42 QMNSLTYITLANINVTD-LTG-IEYAHNIKDLTINNIHATNYNPI--SGLSNLERLRIMG 97
Query: 453 NQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512
++ P L LT L LD+S + SI + L K++ +++S N +I L
Sbjct: 98 KDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLK 156
Query: 513 KLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSG 553
L +L L++ + + I + L +L + G
Sbjct: 157 TLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 5e-17
Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 10/184 (5%)
Query: 226 LRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN 285
+ L + + + LT ++L+ + T + + +++ L + +
Sbjct: 22 FKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINV--TDLTGIEYAHNIKDLTINNI 76
Query: 286 QLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRN 345
+ + P I NL L + G T N+ SL + + S+ +
Sbjct: 77 HATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINT 134
Query: 346 CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGN 405
+ + L N I +I P LK ++ ++ + + P+L L
Sbjct: 135 LPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD--YRGIEDFPKLNQLYAFSQ 191
Query: 406 NITG 409
I G
Sbjct: 192 TIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 1e-16
Identities = 26/141 (18%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Query: 436 PLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHY 495
+ A + SL + L ++ + + ++ L ++ + P + L L
Sbjct: 37 NITEAQMNSLTYITLANINVTD-LTG-IEYAHNIKDLTINNIHATNYNP--ISGLSNLER 92
Query: 496 LNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSI 555
L + + + + L L L+ LD+SH+ I +I L + ++LS+N I
Sbjct: 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI 152
Query: 556 PTNFENMHGLLSIDISYNELD 576
+ + L S++I ++ +
Sbjct: 153 -MPLKTLPELKSLNIQFDGVH 172
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 6e-15
Identities = 27/134 (20%), Positives = 55/134 (41%), Gaps = 7/134 (5%)
Query: 440 ANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMS 499
+ + + +L + + + L Y+ L+ + + G + Y + L ++
Sbjct: 20 STFKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINVT-DLTG-IEYAHNIKDLTIN 74
Query: 500 SNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNF 559
+ + P + L L L + + + P + L SL L++SH+ SI T
Sbjct: 75 NIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKI 132
Query: 560 ENMHGLLSIDISYN 573
+ + SID+SYN
Sbjct: 133 NTLPKVNSIDLSYN 146
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 8e-15
Identities = 29/209 (13%), Positives = 72/209 (34%), Gaps = 34/209 (16%)
Query: 249 NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGG 308
K + L Q+ + +++L+ + L + ++ + I N+ L++
Sbjct: 21 TFKAYLNGLLGQSSTANITEAQMNSLTYIT---LANINVT-DL-TGIEYAHNIKDLTINN 75
Query: 309 NQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFG 368
T + P + ++LER+R+ + + +
Sbjct: 76 IHATNYNP--------------------------ISGLSNLERLRIMGKDVTSDKIPNLS 109
Query: 369 IYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSS 428
+L L D+S++ + + P++ + ++ N I P + +L L+
Sbjct: 110 GLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP-LKTLPELKSLNIQF 168
Query: 429 NHLVGKVPLELANLTSLNDLILNGNQLSG 457
+ + +E + LN L + G
Sbjct: 169 DGVHDYRGIE--DFPKLNQLYAFSQTIGG 195
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 4e-22
Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 55/295 (18%)
Query: 697 IGRGGYGSVYKAELPSGD------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNI 749
+GRG +G V +A+ D TVAVK L + + +SE+K L + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-HRALMSELKILIHIGHHLNV 93
Query: 750 VKFYGFCSHA-RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG----------- 797
V G C+ ++ E+ + G+L+ L S+ + + +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 798 ---VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG 854
VA + ++ R +HRD++++N+LL + + DFG A+ + D +
Sbjct: 154 SFQVAKGMEFL--ASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY---VRK 207
Query: 855 TYGYV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANM 908
+ APE + T + DV+SFGVL E+ G P PG +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP-----------YPGVKI 256
Query: 909 NEAIDHMFDA--RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKL 960
+E R+ P + + + L C P +RP ++V L
Sbjct: 257 DEEFCRRLKEGTRMRAP------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 9e-22
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 27/197 (13%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYG 754
+G G G V + +G A+K L+ + E+ +IV
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYD-------SPKARQEVDHHWQASGGPHIVCILD 89
Query: 755 FCSHARHS----FLVYEYLERGSL-ARILS--SETATEMDWSKRVNVIKGVAHALSYMHH 807
+ H ++ E +E G L +RI + TE + ++ +++ + A+ ++H
Sbjct: 90 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE---IMRDIGTAIQFLHS 146
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
I HRDV +N+L + + ++DFG AK ++ T YVAPE+
Sbjct: 147 HN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVL 201
Query: 865 YTMKVTEKCDVYSFGVL 881
K + CD++S GV+
Sbjct: 202 GPEKYDKSCDMWSLGVI 218
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 2e-21
Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 35/270 (12%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG+G + V A + +G VA+K + T ++ E++ + + H NIVK +
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 756 CSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+ +L+ EY G + +++ E + + + A+ Y H + IV
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS---KFRQIVSAVQYCHQKR---IV 136
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL----AYTMKVT 870
HRD+ ++N+LLD + ++DFG + G Y APEL Y
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDAFCGAPPYAAPELFQGKKYDGP-- 193
Query: 871 EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP-PPWLEVGV 929
+ DV+S GV+ ++ G P D G N+ E + + + P ++
Sbjct: 194 -EVDVWSLGVILYTLVSGSLPFD-----------GQNLKELRERVLRGKYRIPFYMSTDC 241
Query: 930 EDKLKSIIEVALSCVDANPERRPNMQIVCK 959
E+ LK + + NP +R ++ + K
Sbjct: 242 ENLLKRFLVL-------NPIKRGTLEQIMK 264
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 94.6 bits (235), Expect = 4e-21
Identities = 34/291 (11%), Positives = 97/291 (33%), Gaps = 35/291 (12%)
Query: 683 EIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQK-EFLSEIKAL 741
+ + + + K + + + + + +I+ +
Sbjct: 56 KALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRM 115
Query: 742 TGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSE-TATEMDWSKRVNVIKGVAH 800
+N V S + ++ + + +L ++ + + + +++ +A
Sbjct: 116 DPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAE 175
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA------- 853
A+ ++H + ++HRD+ N+ + V DFG + D + L
Sbjct: 176 AVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAT 232
Query: 854 -----GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANM 908
GT Y++PE + + K D++S G++ E++ +
Sbjct: 233 HTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFS----------TQMER 279
Query: 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
I + + + P + + + +++ + +P RP + +
Sbjct: 280 VRIITDVRNLKFPLLFTQ--KYPQEHMMVQ---DMLSPSPTERPEATDIIE 325
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 5e-21
Identities = 42/237 (17%), Positives = 82/237 (34%), Gaps = 16/237 (6%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTN 133
+ + P L + L +L L+ + +S N I +++ L
Sbjct: 21 VTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80
Query: 134 LEVLHMF-VNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNS 190
L + + N+L I +L +L+ L + + V + V L + +N
Sbjct: 81 LHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI 139
Query: 191 LPGSIPSSI--GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI- 247
+I + G V L+L KN ++ S+F + NN L +P ++
Sbjct: 140 NIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVF 198
Query: 248 GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSL 304
L +S+ ++ L NL L Y+ +++ L +L
Sbjct: 199 HGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL-------KKLPTLEKLVAL 248
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 1e-18
Identities = 56/303 (18%), Positives = 99/303 (32%), Gaps = 65/303 (21%)
Query: 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289
++++ IP ++ + +L +LR + S LE + + N +
Sbjct: 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 68
Query: 290 HIPQEIGNFMNLNSLSV----GGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRN 345
I F NL L N ++ P+ +N
Sbjct: 69 VIEA--DVFSNLPKLHEIRIEKANNLL-YIN-----------------------PEAFQN 102
Query: 346 CTSLERVRLEKNQLIGNISDD-FGIYPNLKLFDLSYNKFYGELSSNWWN--CPQLGILKI 402
+L+ + + I ++ D L D+ N + N + + IL +
Sbjct: 103 LPNLQYLLISNTG-IKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWL 161
Query: 403 AGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE 462
N I I N TQL EL+ S N+ NL L + + +G
Sbjct: 162 NKNGIQ-EIHNSAFNGTQLDELNLSDNN----------NLEELPNDVFHG---------- 200
Query: 463 LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDL 522
+ LD+S R + L KL + + +++P L KLV L E L
Sbjct: 201 ---ASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL---KKLPT-LEKLVALMEASL 253
Query: 523 SHN 525
++
Sbjct: 254 TYP 256
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 2e-17
Identities = 48/276 (17%), Positives = 91/276 (32%), Gaps = 39/276 (14%)
Query: 184 LYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243
+ + IPS + N + L LR +F L K+E+S N + I
Sbjct: 14 FLCQESKV-TEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 70
Query: 244 PQEI-GNLKLLTDLSLSQ-NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNL 301
++ NL L ++ + + N L P + NL +L+ L + + + H+P + ++
Sbjct: 71 EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPD--VHKIHS 127
Query: 302 NSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLP-KTLRNCTS-LERVRLEKNQL 359
+ DN I ++ + + + L KN +
Sbjct: 128 L---------------------QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166
Query: 360 IGNISDDFGIYPNLKLFDLSYNKFYGELSSN-WWNCPQLGILKIAGNNITGGIPPEI-GN 417
+ F +L N EL ++ + IL I+ I +P N
Sbjct: 167 QEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSYGLEN 224
Query: 418 ATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGN 453
+L + + L L +L + L
Sbjct: 225 LKKLRARSTYNLKKLP----TLEKLVALMEASLTYP 256
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 4e-12
Identities = 41/205 (20%), Positives = 71/205 (34%), Gaps = 14/205 (6%)
Query: 64 INLTSTSLKGTLDQFPFSLFSHLSYLDL-NENQLYGNIPSPI-GNLTKLKFLNLSSNHFS 121
I ++ + ++ FS L + + N L I NL L++L +S+
Sbjct: 59 IEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIK 117
Query: 122 GKIPSEIGL-LTNLEVLHMFVNHLNGSIPE---IGHLSSLKNLALDGNHLDGPIPVSIGN 177
+P + +L + N +I +G L L+ N + I S N
Sbjct: 118 -HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFN 175
Query: 178 LSSLVGLYL-YNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSN 236
+ L L L NN+L S V L + + + L+KL N
Sbjct: 176 GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 235
Query: 237 NQLSGSIPQEIGNLKLLTDLSLSQN 261
+ +P + L L + SL+
Sbjct: 236 LK---KLPT-LEKLVALMEASLTYP 256
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 1e-20
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK-FYG 754
G+G +G+V E +G +VA+KK+ +E L ++ L + H NIV+
Sbjct: 31 AGQGTFGTVQLGKEKSTGMSVAIKKV--IQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSY 87
Query: 755 FCSHARHSF------LVYEYLERGSLARILSSETATEMDWSKRVNVIKG----VAHALSY 804
F + +V EY+ +L R + ++ +IK + ++
Sbjct: 88 FYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPP--PILIKVFLFQLIRSIGC 144
Query: 805 MHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL 863
+H + HRD+ NVL++ + DFG+AK L P N + + Y Y APEL
Sbjct: 145 LHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-YRAPEL 202
Query: 864 -----AYTMKVTEKCDVYSFG-VLALEVIKGQ 889
YT V D++S G + A E++ G+
Sbjct: 203 IFGNQHYTTAV----DIWSVGCIFA-EMMLGE 229
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 1e-20
Identities = 45/229 (19%), Positives = 93/229 (40%), Gaps = 16/229 (6%)
Query: 78 FPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVL 137
FP ++ +L + + L+ ++ N +++ + + + TNL+ L
Sbjct: 13 FPDPGLANAVKQNLGKQSV--TDLVSQKELSGVQNFNGDNSNIQ-SL-AGMQFFTNLKEL 68
Query: 138 HMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPS 197
H+ N ++ + + L+ L+ L+++ N L ++ + L L+L NN L
Sbjct: 69 HLSHNQIS-DLSPLKDLTKLEELSVNRNRLKN---LNGIPSACLSRLFLDNNEL--RDTD 122
Query: 198 SIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLS 257
S+ +L NL L ++ N L+ G+L KL L+L N+++ + + LK + +
Sbjct: 123 SLIHLKNLEILSIRNNKLK--SIVMLGFLSKLEVLDLHGNEIT-NTG-GLTRLKKVNWID 178
Query: 258 LSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSV 306
L+ + L + D + P I N + V
Sbjct: 179 LTGQKCVNEPVKYQPELYITNTVKDPDGRWIS--PYYISNGGSYVDGCV 225
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 4e-18
Identities = 48/260 (18%), Positives = 93/260 (35%), Gaps = 23/260 (8%)
Query: 147 SIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLV 206
+ L++ L + + LS + N+++ + + +NL
Sbjct: 11 QVFPDPGLANAVKQNLGKQSVTDLVSQK--ELSGVQNFNGDNSNI--QSLAGMQFFTNLK 66
Query: 207 YLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKL--LTDLSLSQNQLR 264
L L N + S L KL +L ++ N+L + + L+ L L N+L
Sbjct: 67 ELHLSHNQISDL--SPLKDLTKLEELSVNRNRLK-----NLNGIPSACLSRLFLDNNEL- 118
Query: 265 GTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS 324
SL +L +LEIL + +N+L I +G L L + GN+ T + +
Sbjct: 119 -RDTDSLIHLKNLEILSIRNNKLK-SIV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKK 173
Query: 325 LQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG--NISDDFGIYPNLKLFDLSYNK 382
+ + + + K V+ + I IS+ G Y + +
Sbjct: 174 VNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWISPYYISNG-GSYVDGCVLW-ELPV 231
Query: 383 FYGELSSNWWNCPQLGILKI 402
+ E+S + +G +
Sbjct: 232 YTDEVSYKFSEYINVGETEA 251
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 5e-14
Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 15/183 (8%)
Query: 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNG 452
+ ++T + + + + ++++ + + T+L +L L+
Sbjct: 17 GLANAVKQNLGKQSVTD-LVS-QKELSGVQNFNGDNSNI--QSLAGMQFFTNLKELHLSH 72
Query: 453 NQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512
NQ+S + P L LT L L ++ NR L L + +NE L
Sbjct: 73 NQISD-LSP-LKDLTKLEELSVNRNRLKNLNGIP---SACLSRLFLDNNELRDTDS--LI 125
Query: 513 KLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISY 572
L L L + +N L+ I + L LE L+L N ++ + + + ID++
Sbjct: 126 HLKNLEILSIRNNKLK-SIVM-LGFLSKLEVLDLHGNEIT-NT-GGLTRLKKVNWIDLTG 181
Query: 573 NEL 575
+
Sbjct: 182 QKC 184
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 49/241 (20%), Positives = 86/241 (35%), Gaps = 37/241 (15%)
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
F++L L L+ NQ+ ++ SP+ +LTKL+ L+++ N L NL +
Sbjct: 58 GMQFFTNLKELHLSHNQI-SDL-SPLKDLTKLEELSVNRNR-----------LKNLNGI- 103
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS 198
+ L L LD N L + +L +L L + NN L
Sbjct: 104 --------------PSACLSRLFLDNNELRDTDS--LIHLKNLEILSIRNNKL--KSIVM 145
Query: 199 IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSL 258
+G LS L L L N + L+K+ ++L+ + + L + +
Sbjct: 146 LGFLSKLEVLDLHGNEITN--TGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKD 203
Query: 259 SQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQN 318
+ P +SN S + + + F ++ F G + Q
Sbjct: 204 PDGRW--ISPYYISNGGSYVDGCVLWELPV-YTDEVSYKFSEYINVGETEAIFDGTVTQP 260
Query: 319 I 319
I
Sbjct: 261 I 261
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 3e-13
Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 16/226 (7%)
Query: 354 LEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPP 413
+++ I + D G N +L +S + +NI +
Sbjct: 3 IQRPTPINQVFPDPG-LANAVKQNLGKQSVTDLVSQK--ELSGVQNFNGDNSNIQS-LAG 58
Query: 414 EIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLD 473
+ T L EL S N + PL+ +LT L +L +N N+L + + L L
Sbjct: 59 -MQFFTNLKELHLSHNQISDLSPLK--DLTKLEELSVNRNRLKN-LNG-IPSAC-LSRLF 112
Query: 474 LSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPP 533
L N ++ +L L L++ +N+ I LG L +L LDL N +
Sbjct: 113 LDNNELRD--TDSLIHLKNLEILSIRNNKLK-SIV-MLGFLSKLEVLDLHGNEIT-NTGG 167
Query: 534 EICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPI 579
+ L+ + ++L+ ++ ++ P
Sbjct: 168 -LTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWISPY 212
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 1e-20
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 30/199 (15%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYG 754
+G G G V + + + A+K L + E++ + +IV+
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVD 122
Query: 755 FC----SHARHSFLVYEYLERGSL-ARILS--SETATEMDWSKRVNVIKGVAHALSYMHH 807
+ + +V E L+ G L +RI + TE + S ++K + A+ Y+H
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS---EIMKSIGEAIQYLHS 179
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVS-----DFGTAKLLKPDSSNWSELAGTYGYVAPE 862
I HRDV +N+L + + + DFG AK +S + T YVAPE
Sbjct: 180 IN---IAHRDVKPENLL--YTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPE 233
Query: 863 LAYTMKVTEKCDVYSFGVL 881
+ K + CD++S GV+
Sbjct: 234 VLGPEKYDKSCDMWSLGVI 252
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 6e-20
Identities = 58/276 (21%), Positives = 102/276 (36%), Gaps = 46/276 (16%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVK-----KLHSFTG-ETTHQKEFLSEIKALTGVRHRNI 749
+G G +G V+ A V VK K+ E + EI L+ V H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 750 VKFYGFCSHARHSFLVYEYLERGS--LARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
+K + LV E G A I E S + + + A+ Y+
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY---IFRQLVSAVGYLRL 148
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL---- 863
+ I+HRD+ +N+++ ++ + DFG+A L+ + GT Y APE+
Sbjct: 149 KD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG-KLFYTFCGTIEYCAPEVLMGN 204
Query: 864 AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
Y + +++S GV L +L P + E ++ PP
Sbjct: 205 PYRGP---ELEMWSLGV-------------TLYTLVFEENPFCELEETVEAAIH---PPY 245
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
+ + + +++ PERR ++ +
Sbjct: 246 LVSKELMSLVSGLLQP-------VPERRTTLEKLVT 274
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 6e-20
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGS 147
+L + + + + L + + +++ + I L N+ L + N L+
Sbjct: 23 KANLKKKSV-TDAVTQNE-LNSIDQIIANNSDIK-SVQG-IQYLPNVRYLALGGNKLH-D 77
Query: 148 IPEIGHLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNSLPGSIPSSIGN-LSNL 205
I + L++L L L GN L +P + L++L L L N L S+P + + L+NL
Sbjct: 78 ISALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNL 135
Query: 206 VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLR 264
YL L N L+ F L LT+L+LS NQL S+P+ + L L DL L QNQL+
Sbjct: 136 TYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLK 194
Query: 265 GTVPS-SLSNLSSLEILHLYDNQ 286
+VP L+SL+ + L+DN
Sbjct: 195 -SVPDGVFDRLTSLQYIWLHDNP 216
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 1e-18
Identities = 65/213 (30%), Positives = 97/213 (45%), Gaps = 28/213 (13%)
Query: 103 PIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162
P + NL + ++ L +++ + + + S+ I +L +++ LAL
Sbjct: 14 PDDAFAETIKANLKKKSVT-DAVTQNEL-NSIDQIIANNSDIK-SVQGIQYLPNVRYLAL 70
Query: 163 DGNHLDGPIPVSIG---NLSSLVGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKKNHLRGP 218
GN L I L++L L L N L S+P+ + L+NL L L +N L+
Sbjct: 71 GGNKLH-----DISALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQSL 124
Query: 219 IPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSN---- 273
F L LT L L++NQL S+P+ + L LT+L LS NQL SL
Sbjct: 125 PDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQL-----QSLPEGVFD 178
Query: 274 -LSSLEILHLYDNQLSGHIPQEIGNFMNLNSLS 305
L+ L+ L LY NQL +P G F L SL
Sbjct: 179 KLTQLKDLRLYQNQLKS-VPD--GVFDRLTSLQ 208
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 7e-15
Identities = 58/221 (26%), Positives = 88/221 (39%), Gaps = 28/221 (12%)
Query: 51 SGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKL 110
NL S+ D + + + + N + + I L +
Sbjct: 15 DDAFAETI----KANLKKKSVT---DAVTQNELNSIDQIIANNSDIKS--VQGIQYLPNV 65
Query: 111 KFLNLSSNHFSGKIPSEIGL---LTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGN 165
++L L N +I LTNL L + N L S+P L++LK L L N
Sbjct: 66 RYLALGGNKLH-----DISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVEN 119
Query: 166 HLDGPIPVSIGN-LSSLVGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKKNHLRGPIPSS- 222
L +P + + L++L L L +N L S+P + L+NL L L N L+ +P
Sbjct: 120 QLQS-LPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQS-LPEGV 176
Query: 223 FGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQ 262
F L +L L L NQL S+P + L L + L N
Sbjct: 177 FDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNP 216
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 5e-14
Identities = 50/194 (25%), Positives = 76/194 (39%), Gaps = 21/194 (10%)
Query: 124 IPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVG 183
P + ++ + L+S+ + + + + I L ++
Sbjct: 13 FPDDA--FAETIKANLKKKSVT-DAVTQNELNSIDQIIANNSDIKSVQG--IQYLPNVRY 67
Query: 184 LYLYNNSLPGSIPSSIG---NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240
L L N L I L+NL YL L N L+ F L L +L L NQL
Sbjct: 68 LALGGNKL-----HDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ 122
Query: 241 GSIPQEIGN-LKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF- 298
S+P + + L LT L+L+ NQL+ L++L L L NQL +P+ G F
Sbjct: 123 -SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPE--GVFD 178
Query: 299 --MNLNSLSVGGNQ 310
L L + NQ
Sbjct: 179 KLTQLKDLRLYQNQ 192
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 419 TQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS---GGIPPELGLLTDLGYLDLS 475
T L L + N L LT+L +L+L NQL G+ +L T+L YL+L+
Sbjct: 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKL---TNLTYLNLA 141
Query: 476 ANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHNLLRGEIPPE 534
N+ G L L L++S N+ Q +P + KL QL +L L N L+ +P
Sbjct: 142 HNQLQSLPKGVFDKLTNLTELDLSYNQL-QSLPEGVFDKLTQLKDLRLYQNQLKS-VPDG 199
Query: 535 IC-NLESLEKLNLSHN 549
+ L SL+ + L N
Sbjct: 200 VFDRLTSLQYIWLHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 413 PEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL---LTDL 469
+ ++ +++ + ++ L ++ L L GN+L ++ LT+L
Sbjct: 35 VTQNELNSIDQIIANNSDIKSVQGIQ--YLPNVRYLALGGNKLH-----DISALKELTNL 87
Query: 470 GYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHNLLR 528
YL L+ N+ G L L L + N+ Q +P + KL L+ L+L+HN L+
Sbjct: 88 TYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLTYLNLAHNQLQ 146
Query: 529 GEIPPEIC-NLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNEL 575
+P + L +L +L+LS+N L S+P F+ + L + + N+L
Sbjct: 147 -SLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQL 193
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 89.9 bits (223), Expect = 2e-19
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 124 IPSEIGLLTNLEVLHMFVNHLNGSIPEI--GHLSSLKNLALDGNHLDGPIPVSI-GNLSS 180
+P L + +L + N+L+ E L++L +L L NHL+ I + +
Sbjct: 33 VPQ--SLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNF-ISSEAFVPVPN 89
Query: 181 LVGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQL 239
L L L +N L ++ + +L L L L NH+ ++F + +L KL LS NQ+
Sbjct: 90 LRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI 148
Query: 240 SGSIPQEI----GNLKLLTDLSLSQNQLRGTVPSSLSNLSSL--EILHLYDNQL 287
S P E+ L L L LS N+L+ + L L + L+L++N L
Sbjct: 149 S-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 86.1 bits (213), Expect = 4e-18
Identities = 44/206 (21%), Positives = 65/206 (31%), Gaps = 39/206 (18%)
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLK 251
++P S+ S L L N+L + L L L LS+N L+ I E +
Sbjct: 32 NVPQSL--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVP 88
Query: 252 LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSV---GG 308
L L LS N L S+L +LE+L LY+N + + + F ++ L
Sbjct: 89 NLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIV-VVDR--NAFEDMAQLQKLYLSQ 145
Query: 309 NQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFG 368
NQ + L + L N+L D
Sbjct: 146 NQIS----------------RFPVELIKD-----GNKLPKLMLLDLSSNKLKKLPLTDLQ 184
Query: 369 IYPNLKLFDLSYNKFYGELSSNWWNC 394
P L L +N C
Sbjct: 185 KLPAWVKNGLY-------LHNNPLEC 203
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 2e-16
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPLE--LANLTSLNDLILNGNQLSGGIPPE-LGLLT 467
+P + + T LD S N+L ++ E LT+L+ L+L+ N L+ I E +
Sbjct: 33 VPQSLPSYTA--LLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLNF-ISSEAFVPVP 88
Query: 468 DLGYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNL 526
+L YLDLS+N ++ + L L L + +N + QL +L LS N
Sbjct: 89 NLRYLDLSSNHL-HTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQ 147
Query: 527 LRGEIPPEI----CNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDIS 571
+ P E+ L L L+LS N L T+ + + + +
Sbjct: 148 IS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLY 195
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 2e-13
Identities = 47/188 (25%), Positives = 68/188 (36%), Gaps = 29/188 (15%)
Query: 368 GIYPNLKLFDLSYNKFYGELSSNW--WNCPQLGILKIAGNNITGGIPPEI-GNATQLHEL 424
+ L DLS+N L + W L L ++ N++ I E L L
Sbjct: 36 SLPSYTALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLNF-ISSEAFVPVPNLRYL 93
Query: 425 DFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE-LGLLTDLGYLDLSANRFSKSI 483
D SSNHL ++L +L L+L N + + + L L LS N+ S
Sbjct: 94 DLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQNQIS-RF 151
Query: 484 PGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEK 543
P + KL +L LDLS N L+ ++ L + K
Sbjct: 152 PVEL---------------IKD-----GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVK 191
Query: 544 LNLS-HNN 550
L HNN
Sbjct: 192 NGLYLHNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 6e-10
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 14/139 (10%)
Query: 65 NLTSTSLKG-TLDQFPFSLFSHLS---YLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNH 119
NL S L L+ F + YLDL+ N L + + +L L+ L L +NH
Sbjct: 65 NLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHL-HTLDEFLFSDLQALEVLLLYNNH 123
Query: 120 FSGKIPSEI-GLLTNLEVLHMFVNHL----NGSIPEIGHLSSLKNLALDGNHLDGPIPVS 174
+ + L+ L++ N + I + L L L L N L
Sbjct: 124 IV-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTD 182
Query: 175 IGNLSSLV--GLYLYNNSL 191
+ L + V GLYL+NN L
Sbjct: 183 LQKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 6e-05
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 519 ELDLSHNLLRGEIPPEI--CNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNEL 575
LDLSHN L + E L +L L LSHN+L+ I + F + L +D+S N L
Sbjct: 43 LLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHL 100
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 89.3 bits (221), Expect = 5e-19
Identities = 35/303 (11%), Positives = 88/303 (29%), Gaps = 72/303 (23%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE---------------------- 733
+G+ + +A + +G++ V + ++ +
Sbjct: 81 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 140
Query: 734 ----FLSEIKALTGVRHRNIVKFYG-FCSHARHSFLVYEYLERGSLARILS-----SETA 783
F+ + + + +++ S + +L S T
Sbjct: 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 200
Query: 784 TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843
+ R+ + V L+ +HH +VH + +++LD ++ F
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRD- 256
Query: 844 PDSSNWSELAGTYGYVAPEL-----------AYTMKVTEKCDVYSFGVLALEVIKGQHPK 892
+ + G+ PEL +T D ++ G++ + P
Sbjct: 257 ---GARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP- 312
Query: 893 DLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
++ + G +E I +P P +++++E + E R
Sbjct: 313 -----ITKDAALG--GSEWI-FRSCKNIPQP---------VRALLE---GFLRYPKEDRL 352
Query: 953 NMQ 955
Sbjct: 353 LPL 355
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 89.0 bits (220), Expect = 2e-18
Identities = 53/321 (16%), Positives = 96/321 (29%), Gaps = 22/321 (6%)
Query: 1 FSLNVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGR 60
+ + +R TL + + + N
Sbjct: 239 AEPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSH 298
Query: 61 IISINLTSTSLKGTLDQFPFS---LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSS 117
+ +L + SL L Q F S + +L LS
Sbjct: 299 VWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSV 358
Query: 118 NHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGN 177
S + SE+ L + + + I + +L L + L
Sbjct: 359 EK-STVLQSELESCKEL--QELEPENKWCLLTIILLMRALDPLLYEKETLQ-----YFST 410
Query: 178 LSSLVGLYLYNNSLPGSI-----PSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232
L ++ + S +++ L L L + L +T L
Sbjct: 411 LKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT--VLCHLEQLLLVTHL 468
Query: 233 ELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGH-I 291
+LS+N+L ++P + L+ L L S N L ++NL L+ L L +N+L
Sbjct: 469 DLSHNRLR-ALPPALAALRCLEVLQASDNAL--ENVDGVANLPRLQELLLCNNRLQQSAA 525
Query: 292 PQEIGNFMNLNSLSVGGNQFT 312
Q + + L L++ GN
Sbjct: 526 IQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 80.2 bits (197), Expect = 1e-15
Identities = 52/316 (16%), Positives = 98/316 (31%), Gaps = 18/316 (5%)
Query: 246 EIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLS 305
E ++ +S + L L+ S + L L ++ + + N S
Sbjct: 240 EPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSHV 299
Query: 306 VGGNQFTGFLPQNICQSGSLQYFSVHDNYF--------IGSLPKTLRNCTSLERVRLEKN 357
+ L + Q ++ D+ + L R L
Sbjct: 300 WLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVE 359
Query: 358 QLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGN 417
+ + +L +L + L + L L + + +
Sbjct: 360 KST---VLQSELESCKELQELEPENKW-CLLTIILLMRALDPLLYEKETLQYFSTLKAVD 415
Query: 418 ATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSAN 477
+ LD + + + + + L L L+ + L L + +LDLS N
Sbjct: 416 PMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT--VLCHLEQLLLVTHLDLSHN 473
Query: 478 RFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG-EIPPEIC 536
R ++P + L L L S N + + L +L EL L +N L+ +
Sbjct: 474 RLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQQSAAIQPLV 530
Query: 537 NLESLEKLNLSHNNLS 552
+ L LNL N+L
Sbjct: 531 SCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 73.6 bits (180), Expect = 2e-13
Identities = 43/215 (20%), Positives = 79/215 (36%), Gaps = 16/215 (7%)
Query: 378 LSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHL---VGK 434
+ + QL +++ T + E+ + +L EL+ + +
Sbjct: 332 VLLKDRPECWCRDSATDEQLFRCELSVEKSTV-LQSELESCKELQELEPENKWCLLTIIL 390
Query: 435 VPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLH 494
+ L L + + + L P L DL L N K ++
Sbjct: 391 LMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADV------R 444
Query: 495 YLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGS 554
L+++ + + L +L+ ++ LDLSHN LR +PP + L LE L S N L +
Sbjct: 445 VLHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-N 500
Query: 555 IPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAP 589
+ N+ L + + N L +I+ P
Sbjct: 501 VD-GVANLPRLQELLLCNNRLQQ-SAAIQPLVSCP 533
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 60.2 bits (145), Expect = 2e-09
Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 9/151 (5%)
Query: 83 FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVN 142
+YLD ++ ++ L+L+ + + + L + L + N
Sbjct: 416 PMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHN 473
Query: 143 HLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPSSIGN 201
L P + L L+ L N L+ + + NL L L L NN L + + +
Sbjct: 474 RLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVS 531
Query: 202 LSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232
LV L L+ N + G +L ++
Sbjct: 532 CPRLVLLNLQGN----SLCQEEGIQERLAEM 558
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 6e-18
Identities = 53/276 (19%), Positives = 97/276 (35%), Gaps = 52/276 (18%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVK-----KLHSFTGETTHQKEFLSEIKAL----TGVRH 746
+G+GG+G+V+ L VA+K ++ ++ + L E+ L G H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL-EVALLWKVGAGGGH 97
Query: 747 RNIVKFYGFCSHARHSFLVYEYLERGS--LARILSSETATEMDWSKRVNVIKGVAHALSY 804
+++ + LV E I E S+ V A+ +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE-GPSRC--FFGQVVAAIQH 154
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL 863
H +VHRD+ +N+L+D A + DFG+ LL +++ GT Y PE
Sbjct: 155 CHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLH--DEPYTDFDGTRVYSPPEW 209
Query: 864 ----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919
Y V+S G+L +++ G P + E ++
Sbjct: 210 ISRHQYHAL---PATVWSLGILLYDMVCGDIPFE-------------RDQEILEAELH-- 251
Query: 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
P + ++ + P RP+++
Sbjct: 252 -FPAHVSPDCCALIRRCLAP-------KPSSRPSLE 279
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 6e-18
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 4/133 (3%)
Query: 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKKN 213
++ + L+ N + P + L + L NN + + L +L L L N
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGN 90
Query: 214 HLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLS 272
+ S F L L L L+ N+++ + + +L L LSL N+L+ + S
Sbjct: 91 KITELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 149
Query: 273 NLSSLEILHLYDN 285
L +++ +HL N
Sbjct: 150 PLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 4e-11
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 459 IPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLVQL 517
IP L + + L N PG KL +++S+N+ E+ L L
Sbjct: 26 IPT--NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQI-SELAPDAFQGLRSL 82
Query: 518 SELDLSHNLLRGEIPPEI-CNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNEL 575
+ L L N + E+P + L SL+ L L+ N ++ + + F+++H L + + N+L
Sbjct: 83 NSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKL 140
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 5e-11
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 230 TKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
T++ L N + IP K L + LS NQ+ P + L SL L LY N+++
Sbjct: 35 TEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93
Query: 289 GHIPQEI-GNFMNLNSLSVGGNQFTGFLPQNICQS-GSLQYFSVHDNYFIGSLPK-TLRN 345
+P+ + +L L + N+ L + Q +L S++DN + ++ K T
Sbjct: 94 -ELPKSLFEGLFSLQLLLLNANKINC-LRVDAFQDLHNLNLLSLYDN-KLQTIAKGTFSP 150
Query: 346 CTSLERVRLEKN 357
+++ + L +N
Sbjct: 151 LRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 9e-11
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 14/145 (9%)
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL---LT 467
IP + E+ N + P + L + L+ NQ+S + P L
Sbjct: 26 IPTNLPETIT--EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAP--DAFQGLR 80
Query: 468 DLGYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHN 525
L L L N+ +P ++ L L L +++N+ + + L L+ L L N
Sbjct: 81 SLNSLVLYGNKI-TELPKSLFEGLFSLQLLLLNANKI-NCLRVDAFQDLHNLNLLSLYDN 138
Query: 526 LLRGEIPPEI-CNLESLEKLNLSHN 549
L+ I L +++ ++L+ N
Sbjct: 139 KLQ-TIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVL 137
FS + L +DL+ NQ+ + L L L L N + ++P + L +L++L
Sbjct: 52 FSPYKKLRRIDLSNNQI-SELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLL 109
Query: 138 HMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNN 189
+ N +N + L +L L+L N L + L ++ ++L N
Sbjct: 110 LLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 7e-07
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVL 137
F L+ L L N++ +P + L L+ L L++N + + + L NL +L
Sbjct: 76 FQGLRSLNSLVLYGNKI-TELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLL 133
Query: 138 HMFVNHLNGSIPE--IGHLSSLKNLALDGNHLD 168
++ N L +I + L +++ + L N
Sbjct: 134 SLYDNKLQ-TIAKGTFSPLRAIQTMHLAQNPFI 165
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 26/140 (18%), Positives = 45/140 (32%), Gaps = 28/140 (20%)
Query: 340 PKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGI 399
P L R+ L NQ+ D F +L L NK ++
Sbjct: 49 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK----ITE---------- 94
Query: 400 LKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLEL-ANLTSLNDLILNGNQLSG 457
+P + L L ++N + + ++ +L +LN L L N+L
Sbjct: 95 -----------LPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQT 142
Query: 458 GIPPELGLLTDLGYLDLSAN 477
L + + L+ N
Sbjct: 143 IAKGTFSPLRAIQTMHLAQN 162
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 9e-18
Identities = 44/218 (20%), Positives = 76/218 (34%), Gaps = 12/218 (5%)
Query: 75 LDQFPFSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-GLLT 132
+ + P SL L L E L IPS NL + + +S + ++ S L+
Sbjct: 23 IQRIP-SLPPSTQTLKLIETHL-RTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 80
Query: 133 NLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDG-PIPVSIGNLSSLVGLYLYNN 189
+ + + I + L LK L + L P + + L + +N
Sbjct: 81 KVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDN 140
Query: 190 SLPGSIPS-SIGNLSN-LVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI 247
SIP + L N + L L N + KL + L+ N+ I ++
Sbjct: 141 PYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGYAFNGTKLDAVYLNKNKYLTVIDKDA 199
Query: 248 --GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLY 283
G + L +SQ + L +L L + +
Sbjct: 200 FGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARNTW 237
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 2e-14
Identities = 33/190 (17%), Positives = 67/190 (35%), Gaps = 12/190 (6%)
Query: 395 PQLGILKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLEL-ANLTSLNDLILNG 452
P LK+ ++ IP N + + S + + ++ NL+ + + +
Sbjct: 31 PSTQTLKLIETHLRT-IPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRN 89
Query: 453 NQLSGGIPPE-LGLLTDLGYLDLSANRFSKSIPGN--MGYLLKLHYLNMSSNEFSQEIPI 509
+ I P+ L L L +L + P + L ++ N + IP+
Sbjct: 90 TRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPV 148
Query: 510 QL--GKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-FENMHGLL 566
G + L L +N + N L+ + L+ N I + F ++
Sbjct: 149 NAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGP 207
Query: 567 SI-DISYNEL 575
S+ D+S +
Sbjct: 208 SLLDVSQTSV 217
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 42/278 (15%), Positives = 82/278 (29%), Gaps = 59/278 (21%)
Query: 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
++ + IP L L + LR + SNL ++ +++ +
Sbjct: 13 EEDFRVTCKDIQ-RIP---SLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTL 68
Query: 289 GHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK-TLRNCT 347
+ +F NL+ + + + + + + L+
Sbjct: 69 QQLES--HSFYNLS---------------------KVTHIEIRNTRNLTYIDPDALKELP 105
Query: 348 SLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNI 407
L+ + + + D +Y F IL+I N
Sbjct: 106 LLKFLGIFNTG-LKMFPDLTKVYSTDIFF----------------------ILEITDNPY 142
Query: 408 TGGIPPEI--GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEL-- 463
IP G + L +N V N T L+ + LN N+ I +
Sbjct: 143 MTSIPVNAFQGLCNETLTLKLYNNGF-TSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFG 201
Query: 464 GLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSN 501
G+ + LD+S + ++P L L L +
Sbjct: 202 GVYSGPSLLDVSQTSVT-ALPSKG--LEHLKELIARNT 236
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-17
Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 5/136 (3%)
Query: 155 SSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKK 212
L L+ N I L L + NN + I S + + L
Sbjct: 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKI-TDIEEGAFEGASGVNEILLTS 90
Query: 213 NHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSL 271
N L F L L L L +N+++ + + L + LSL NQ+ P +
Sbjct: 91 NRLENVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQITTVAPGAF 149
Query: 272 SNLSSLEILHLYDNQL 287
L SL L+L N
Sbjct: 150 DTLHSLSTLNLLANPF 165
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 2e-17
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 184 LYLYNNSLPGSIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242
L L NN + I L L + N + +F + ++ L++N+L +
Sbjct: 37 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE-N 95
Query: 243 IPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNL 301
+ ++ L+ L L L N++ S LSS+ +L LYDNQ++ + G F L
Sbjct: 96 VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT-TVAP--GAFDTL 152
Query: 302 NSLS 305
+SLS
Sbjct: 153 HSLS 156
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 4e-10
Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 37/172 (21%)
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPL-ELANLTSLNDLILNGNQLSGGIPPELGL---L 466
IP I T EL ++N L L + + N+++ I G
Sbjct: 26 IPEHIPQYTA--ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD-IEE--GAFEGA 80
Query: 467 TDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNL 526
+ + + L++NR +++ M L L L L N
Sbjct: 81 SGVNEILLTSNRL-ENVQHKM-----------------------FKGLESLKTLMLRSNR 116
Query: 527 LRGEIPPEI-CNLESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNELD 576
+ + + L S+ L+L N ++ ++ F+ +H L ++++ N +
Sbjct: 117 IT-CVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHSLSTLNLLANPFN 166
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 9/131 (6%)
Query: 64 INLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSG 122
+ L + F L ++ + N++ +I + + + L+SN
Sbjct: 37 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKI-TDIEEGAFEGASGVNEILLTSNRLEN 95
Query: 123 KIPSEI-GLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKNLALDGNHLDGPIPVSI-GNL 178
+ ++ L +L+ L + N + + LSS++ L+L N + + L
Sbjct: 96 -VQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQI-TTVAPGAFDTL 152
Query: 179 SSLVGLYLYNN 189
SL L L N
Sbjct: 153 HSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 7/138 (5%)
Query: 368 GIYPNLKLFDLSYNKFYG-ELSSNWWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELD 425
I L+ N+F E + + PQL + + N IT I A+ ++E+
Sbjct: 29 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD-IEEGAFEGASGVNEIL 87
Query: 426 FSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSKSIP 484
+SN L L SL L+L N+++ + + L+ + L L N+ ++
Sbjct: 88 LTSNRLENVQHKMFKGLESLKTLMLRSNRITC-VGNDSFIGLSSVRLLSLYDNQI-TTVA 145
Query: 485 -GNMGYLLKLHYLNMSSN 501
G L L LN+ +N
Sbjct: 146 PGAFDTLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVL 137
F S ++ + L N+L N+ + L LK L L SN + + ++ L+++ +L
Sbjct: 77 FEGASGVNEILLTSNRL-ENVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLL 134
Query: 138 HMFVNHLNGSIPE--IGHLSSLKNLALDGNHLD 168
++ N + ++ L SL L L N +
Sbjct: 135 SLYDNQIT-TVAPGAFDTLHSLSTLNLLANPFN 166
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 66/182 (36%)
Query: 230 TKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
+L L+NN+ + I L L ++ S N++ + S + + L N+L
Sbjct: 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE 94
Query: 289 GHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLP-KTLRNCT 347
++ K +
Sbjct: 95 -------------------------------------------------NVQHKMFKGLE 105
Query: 348 SLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNK--------FYG-------ELSSNWW 392
SL+ + L N++ +D F +++L L N+ F L +N +
Sbjct: 106 SLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165
Query: 393 NC 394
NC
Sbjct: 166 NC 167
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 29/142 (20%), Positives = 48/142 (33%), Gaps = 21/142 (14%)
Query: 347 TSLERVRLEKNQLIG-NISDDFGIYPNLKLFDLSYNK--------FYGELSSNWWNCPQL 397
+RL N+ + F P L+ + S NK F G +
Sbjct: 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEG--------ASGV 83
Query: 398 GILKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS 456
+ + N + + ++ L L SN + L+S+ L L NQ++
Sbjct: 84 NEILLTSNRLEN-VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT 142
Query: 457 GGIPPE-LGLLTDLGYLDLSAN 477
+ P L L L+L AN
Sbjct: 143 -TVAPGAFDTLHSLSTLNLLAN 163
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 1e-17
Identities = 83/438 (18%), Positives = 136/438 (31%), Gaps = 64/438 (14%)
Query: 179 SSLVGLYLYNNSL-PGSIPSSIGNLSNLVYLFLKKNHLR----GPIPSSFGYLRKLTKLE 233
+ L + L + L + L L I S+ L +L
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 62
Query: 234 LSNNQLSGSIPQEIGN-LKL----LTDLSLSQNQLRGT----VPSSLSNLSSLEILHLYD 284
L +N+L + L+ + LSL L G + S+L L +L+ LHL D
Sbjct: 63 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSD 122
Query: 285 NQLSGHIPQEIGNFM-----NLNSLSVGGNQFT----GFLPQNICQSGSLQYFSVHDNYF 335
N L Q + + L L + + L + + +V +N
Sbjct: 123 NLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDI 182
Query: 336 IGS----LPKTLRNCT-SLERVRLEKNQL----IGNISDDFGIYPNLKLFDLSYNKFYGE 386
+ L + L++ LE ++LE + ++ +L+ L NK
Sbjct: 183 NEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242
Query: 387 ----LSSNWWNC-PQLGILKIAGNNIT----GGIPPEIGNATQLHELDFSSNHLVGKVPL 437
L + +L L I IT G + + L EL + N L +
Sbjct: 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302
Query: 438 ELANL-----TSLNDLILNGNQLSG----GIPPELGLLTDLGYLDLSANRFSKSIPGNMG 488
L L L + + L L L +S NR + +
Sbjct: 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC 362
Query: 489 YLLK-----LHYLNMSSNEFSQEIPIQLGKLVQ----LSELDLSHNLLRGEIPPEIC--- 536
L L L ++ + S L + L ELDLS+N L ++
Sbjct: 363 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 422
Query: 537 --NLESLEKLNLSHNNLS 552
LE+L L S
Sbjct: 423 RQPGCLLEQLVLYDIYWS 440
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 1e-12
Identities = 62/375 (16%), Positives = 113/375 (30%), Gaps = 72/375 (19%)
Query: 229 LTKLELSNNQLSGSIPQEIG-NLKLLTDLSLSQNQLRGT----VPSSLSNLSSLEILHLY 283
+ L++ +LS + E+ L+ + L L + S+L +L L+L
Sbjct: 5 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 64
Query: 284 DNQLSGHIPQEIGNFM-----NLNSLSVGGNQFT----GFLPQNICQSGSLQYFSVHDNY 334
N+L + + + LS+ T G L + +LQ + DN
Sbjct: 65 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 124
Query: 335 FIGS-----LPKTLRNCTSLERVRLEKNQL----IGNISDDFGIYPNLKLFDLSYNKFYG 385
+ L LE+++LE L ++ P+ K +S N
Sbjct: 125 LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 184
Query: 386 E--------LSSNWWNCPQLGILKIAGNNITGGIPPEIGNA----TQLHELDFSSNHLVG 433
L + L LK+ +T ++ L EL SN L
Sbjct: 185 AGVRVLCQGLKDSPCQ---LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241
Query: 434 KVPLELAN-----LTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMG 488
EL + L L + ++ + +
Sbjct: 242 VGMAELCPGLLHPSSRLRTLWIWECGIT----------------AKGCGDLCRVLRAKE- 284
Query: 489 YLLKLHYLNMSSNEFSQEIPIQLGKLV-----QLSELDLSHNLLRGEIPPEICNL----E 539
L L+++ NE E L + + QL L + ++
Sbjct: 285 ---SLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNR 341
Query: 540 SLEKLNLSHNNLSGS 554
L +L +S+N L +
Sbjct: 342 FLLELQISNNRLEDA 356
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 7e-11
Identities = 71/431 (16%), Positives = 138/431 (32%), Gaps = 104/431 (24%)
Query: 84 SHLSYLDLNENQLYGNIPSPIG----------NLTKLKFLNLSSNHFSGK----IPSEIG 129
L+ L+L N+L +G K++ L+L + +G + S +
Sbjct: 56 PALAELNLRSNEL-----GDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLR 110
Query: 130 LLTNLEVLHMFVNHLNGS-IPEIGHL-----SSLKNLALDGNHLDGPIPVSIG----NLS 179
L L+ LH+ N L + + + L+ L L+ L +
Sbjct: 111 TLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKP 170
Query: 180 SLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQL 239
L + NN + + + L LK + +L L+L + +
Sbjct: 171 DFKELTVSNNDI---NEAGVRVLCQG----LKDSPC------------QLEALKLESCGV 211
Query: 240 S----GSIPQEIGNLKLLTDLSLSQNQLRGT-----VPSSLSNLSSLEILHLYDNQLS-- 288
+ + + + L +L+L N+L P L S L L +++ ++
Sbjct: 212 TSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAK 271
Query: 289 --GHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNC 346
G + + + +L LS+ GN+ + +C+ +L +
Sbjct: 272 GCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE----------------TLLE---PG 312
Query: 347 TSLERVRLEKNQL----IGNISDDFGIYPNLKLFDLSYNKFYGE--------LSSNWWNC 394
LE + ++ + S L +S N+ L
Sbjct: 313 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQP--GS 370
Query: 395 PQLGILKIAGNNITGGIPPEIGNA----TQLHELDFSSNHL--VGKVPLELA---NLTSL 445
L +L +A +++ + L ELD S+N L G + L + L
Sbjct: 371 -VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 429
Query: 446 NDLILNGNQLS 456
L+L S
Sbjct: 430 EQLVLYDIYWS 440
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 2e-07
Identities = 49/293 (16%), Positives = 83/293 (28%), Gaps = 65/293 (22%)
Query: 322 SGSLQYFSVHDNYF----IGSLPKTLRNCTSLERVRLEKNQL----IGNISDDFGIYPNL 373
S +Q + L L+ C + RL+ L +IS + P L
Sbjct: 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVV---RLDDCGLTEARCKDISSALRVNPAL 58
Query: 374 KLFDLSYNKFYGE--------LSSNWWNCPQLGILKIAGNNIT----GGIPPEIGNATQL 421
+L N+ L + +C ++ L + +T G + + L
Sbjct: 59 AELNLRSNELGDVGVHCVLQGLQTP--SC-KIQKLSLQNCCLTGAGCGVLSSTLRTLPTL 115
Query: 422 HELDFSSNHLVGKVPLELA-----NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSA 476
EL S N L L L L L LS S
Sbjct: 116 QELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLS----------------AASC 159
Query: 477 NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKL-----VQLSELDLSHNLLRGE- 530
+ + L +S+N+ ++ L + QL L L + +
Sbjct: 160 EPLASVLRAKP----DFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215
Query: 531 ---IPPEICNLESLEKLNLSHNNLSGS-----IPTNFENMHGLLSIDISYNEL 575
+ + + SL +L L N L P L ++ I +
Sbjct: 216 CRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI 268
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 2e-17
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 36/211 (17%)
Query: 697 IGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G +G VY+A+L SG+ VA+KK+ ++ E++ + + H NIV+ F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 756 CSHARHSF------LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYM 805
+ LV +Y+ ++ R+ + + V +K + +L+Y+
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLP--VIYVKLYMYQLFRSLAYI 172
Query: 806 HHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL- 863
H I HRD+ +N+LLD + + DFG+AK L N S + Y Y APEL
Sbjct: 173 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 228
Query: 864 ----AYTMKVTEKCDVYSFG-VLALEVIKGQ 889
YT + DV+S G VLA E++ GQ
Sbjct: 229 FGATDYTSSI----DVWSAGCVLA-ELLLGQ 254
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 2e-17
Identities = 54/287 (18%), Positives = 101/287 (35%), Gaps = 76/287 (26%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVK-----KLHSFTGETTHQKEFLSEIKALTGVRHR--N 748
+G GG+GSVY + VA+K ++ + + + E+ L V
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-EVVLLKKVSSGFSG 109
Query: 749 IVKFYGFCSHARHSFLVYEY-----------LERGSL----ARILSSETATEMDWSKRVN 793
+++ + L+ E ERG+L AR +
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----------------S 153
Query: 794 VIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPDSSNWSEL 852
V A+ + H+ ++HRD+ +N+L+D E + DFG+ LLK + +++
Sbjct: 154 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF 208
Query: 853 AGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANM 908
GT Y PE Y + V+S G+L +++ G P + +
Sbjct: 209 DGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMVCGDIPFE-------------HD 252
Query: 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
E I + + ++ + + P RP +
Sbjct: 253 EEIIRGQVF---FRQRVSSECQHLIRWCLAL-------RPSDRPTFE 289
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 6e-17
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 35/210 (16%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK-FYGF 755
IG G +G V++A+L D VA+KK+ ++ E++ + V+H N+V F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQ------DKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 756 CSHARHS-----FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYMH 806
S+ LV EY+ ++ R + +IK + +L+Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPM--LLIKLYMYQLLRSLAYIH 158
Query: 807 HECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL-- 863
I HRD+ +N+LLD + DFG+AK+L N S + Y Y APEL
Sbjct: 159 SIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRY-YRAPELIF 214
Query: 864 ---AYTMKVTEKCDVYSFG-VLALEVIKGQ 889
YT + D++S G V+A E+++GQ
Sbjct: 215 GATNYTTNI----DIWSTGCVMA-ELMQGQ 239
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 7e-17
Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 42/274 (15%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLS-EIKALTGVRHRNIVKFYG 754
+G G +G V E +G VAVK L+ + + EI+ L RH +I+K Y
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 755 FCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
S F+V EY+ G L I E + + + + A+ Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEE---MEARRLFQQILSAVDYCHRHM---V 132
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA---GTYGYVAPEL----AYT 866
VHRD+ +NVLLD A ++DFG + ++ L G+ Y APE+ Y
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----EFLRTSCGSPNYAAPEVISGRLYA 188
Query: 867 MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP-PPWL 925
+ D++S GV+ ++ G P D D +P + + I P +L
Sbjct: 189 ---GPEVDIWSCGVILYALLCGTLPFD------DEHVP--TLFKKI---RGGVFYIPEYL 234
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
V L +++V +P +R ++ + +
Sbjct: 235 NRSVATLLMHMLQV-------DPLKRATIKDIRE 261
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 9e-17
Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 124 IPSEIGLLTNLEVLHMFVNHLNGSIPEIGH-LSSLKNLALDGNHLDGPIPVSI-GNLSSL 181
+PS I + E L + L L+ L L LD N L + + +L+ L
Sbjct: 29 VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQL-QTLSAGVFDDLTEL 85
Query: 182 VGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240
L L NN L S+P + +L+ L L+L N L+ F L KL +L L+ NQL
Sbjct: 86 GTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144
Query: 241 GSIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQ 286
SIP L L LSLS NQL+ + L L+ + L+ NQ
Sbjct: 145 -SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQ 190
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 1e-13
Identities = 48/154 (31%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 184 LYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243
L L + L ++ L+ L +L L N L+ F L +L L L+NNQL+ S+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SL 98
Query: 244 PQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF---M 299
P + +L L L L NQL+ L+ L+ L L NQL IP G F
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS-IPA--GAFDKLT 155
Query: 300 NLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDN 333
NL +LS+ NQ + G LQ ++ N
Sbjct: 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 1e-11
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEL-GLLTDL 469
+P I T+ +LD S L LT L L L+ NQL + + LT+L
Sbjct: 29 VPSGIPADTE--KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LSAGVFDDLTEL 85
Query: 470 GYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHNLLR 528
G L L+ N+ + G +L +L L + N+ + +P + +L +L EL L+ N L+
Sbjct: 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQ 144
Query: 529 GEIPPEICN-LESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNELD 576
IP + L +L+ L+LS N L S+P F+ + L +I + N+ D
Sbjct: 145 -SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFD 192
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVL 137
F + L++L+L+ NQL + + + +LT+L L L++N + +P + LT L+ L
Sbjct: 55 FRGLTKLTWLNLDYNQL-QTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKL 112
Query: 138 HMFVNHLNGSIPEIG---HLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNSLPG 193
++ N L S+P G L+ LK L L+ N L IP L++L L L N L
Sbjct: 113 YLGGNQLK-SLPS-GVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQ- 168
Query: 194 SIPSSI-GNLSNLVYLFLKKN 213
S+P L L + L N
Sbjct: 169 SVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVL 137
F + L L L NQL ++PS + LTKLK L L++N IP+ LTNL+ L
Sbjct: 103 FDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTL 160
Query: 138 HMFVNHLNGSIPE--IGHLSSLKNLALDGNHLD 168
+ N L S+P L L+ + L GN D
Sbjct: 161 SLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFD 192
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCP-QLGILKIAGN 405
E++ L+ L F L +L YN+ LS+ ++ +LG L +A N
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQL-QTLSAGVFDDLTELGTLGLANN 93
Query: 406 NITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELG 464
+ +P + + TQL +L N L LT L +L LN NQL IP G
Sbjct: 94 QLAS-LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPA--G 149
Query: 465 L---LTDLGYLDLSANRFSKSIP-GNMGYLLKLHYLNMSSN 501
LT+L L LS N+ +S+P G L KL + + N
Sbjct: 150 AFDKLTNLQTLSLSTNQL-QSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 254 TDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFM-NLNSLSVGGNQFT 312
L L L ++ L+ L L+L NQL + + + + L +L + NQ
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LSAGVFDDLTELGTLGLANNQLA 96
Query: 313 GFLPQNICQS-GSLQYFSVHDNYFIGSLP-KTLRNCTSLERVRLEKNQL 359
LP + L + N + SLP T L+ +RL NQL
Sbjct: 97 -SLPLGVFDHLTQLDKLYLGGNQ-LKSLPSGVFDRLTKLKELRLNTNQL 143
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 1e-16
Identities = 62/284 (21%), Positives = 106/284 (37%), Gaps = 62/284 (21%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVK-----KLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+G G YG V + + AVK KL + K EI+ L +RH+N++
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVK---KEIQLLRRLRHKNVI 69
Query: 751 KFYGFCSHA--RHSFLVYEYLERGS---LARILSSETATEMDWSKRVNVIKGVAH----- 800
+ + + ++V EY G L + KR V AH
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE----------KRFPV--CQAHGYFCQ 117
Query: 801 ---ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA---G 854
L Y+H + IVH+D+ N+LL +S G A+ L P +++ G
Sbjct: 118 LIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD-DTCRTSQG 173
Query: 855 TYGYVAPELAYTMKVTE--KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912
+ + PE+A + K D++S GV + G +P + ++ + E I
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE------GDNIY--KLFENI 225
Query: 913 DHMFDARLP-PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
P + D LK ++E P +R +++
Sbjct: 226 ---GKGSYAIPGDCGPPLSDLLKGMLEY-------EPAKRFSIR 259
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 1e-16
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 47/285 (16%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT----GETTHQKEFLSEIKAL 741
++F+ IGRG + V ++ +G A+K ++ + GE + F E L
Sbjct: 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSC---FREERDVL 115
Query: 742 TGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSLARILSSETAT-EMDWSKRVNVIKGVA 799
R I + + F + +LV EY G L +LS + ++ + +
Sbjct: 116 VNGDRRWITQLHFAFQD-ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFY--LAEIV 172
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELA-GTY 856
A+ +H VHRD+ N+LLD H+ +DFG+ L+ D + S +A GT
Sbjct: 173 MAIDSVHRLG---YVHRDIKPDNILLD--RCGHIRLADFGSCLKLRADGTVRSLVAVGTP 227
Query: 857 GYVAPELAYTMKVTEK-------CDVYSFGVLALEVIKGQHP---KDLLSSLSDSSLPGA 906
Y++PE+ + CD ++ GV A E+ GQ P A
Sbjct: 228 DYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-----------A 276
Query: 907 NMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERR 951
I H + L P ++ GV ++ + I+ L C PE R
Sbjct: 277 ETYGKIVH-YKEHLSLPLVDEGVPEEARDFIQ-RLLC---PPETR 316
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 1e-16
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 53/224 (23%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG- 754
+G G YG V A P+G+ VA+KK+ F + L EIK L +H NI+ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 755 FCSHARHSF----LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH---------- 800
+ +F ++ E ++ L R++S++ ++ H
Sbjct: 78 QRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSD-------------DHIQYFIYQTLR 123
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG--- 857
A+ +H ++HRD+ N+L++ + V DFG A+++ +++ SE G
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 858 -YV------APEL-----AYTMKVTEKCDVYSFGVLALEVIKGQ 889
+V APE+ Y+ + DV+S G + E+ +
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAM----DVWSCGCILAELFLRR 220
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 2e-16
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 147 SIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSI-GNLSNL 205
S+P G ++ + L L N + P +L +L LYL +N L ++P + +L+ L
Sbjct: 33 SVP-AGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQL 90
Query: 206 VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG 265
L L N L + F L L +L + N+L+ +P+ I L LT L+L QNQL+
Sbjct: 91 TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS 149
Query: 266 TVPSSLSNLSSLEILHLYDNQ 286
+ LSSL +L+ N
Sbjct: 150 IPHGAFDRLSSLTHAYLFGNP 170
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 1e-10
Identities = 39/143 (27%), Positives = 54/143 (37%), Gaps = 10/143 (6%)
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS---GGIPPELGLLT 467
+P I Q L N + P +L +L +L L NQL G+ LT
Sbjct: 34 VPAGIPTNAQ--ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDS---LT 88
Query: 468 DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLL 527
L LDL N+ + L+ L L M N+ E+P + +L L+ L L N L
Sbjct: 89 QLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLALDQNQL 147
Query: 528 RGEIPPEICNLESLEKLNLSHNN 550
+ L SL L N
Sbjct: 148 KSIPHGAFDRLSSLTHAYL-FGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVL 137
F +L L L NQL G +P + +LT+L L+L +N + +PS + L +L+ L
Sbjct: 60 FDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKEL 117
Query: 138 HMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNN 189
M N L +P I L+ L +LALD N L + LSSL YL+ N
Sbjct: 118 FMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 458 GIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLVQ 516
GIP T+ L L N+ +K PG L+ L L + SN+ +P+ + L Q
Sbjct: 37 GIP------TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQ 89
Query: 517 LSELDLSHNLLRGEIPPEICN-LESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
L+ LDL N L +P + + L L++L + N L+ +P E + L + + N+L
Sbjct: 90 LTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL 147
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 443 TSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNE 502
T+ L L+ NQ++ P L +L L L +N+ G L +L L++ +N+
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99
Query: 503 FSQEIPIQL-GKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTN-FE 560
+P + +LV L EL + N L E+P I L L L L N L SIP F+
Sbjct: 100 L-TVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFD 156
Query: 561 NMHGLLSIDISYN 573
+ L + N
Sbjct: 157 RLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Query: 254 TDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI-GNFMNLNSLSVGGNQFT 312
L L NQ+ P +L +L+ L+L NQL +P + + L L +G NQ T
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-LPVGVFDSLTQLTVLDLGTNQLT 101
Query: 313 GFLPQNICQS-GSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYP 371
LP + L+ + N LP+ + T L + L++NQL S G +
Sbjct: 102 V-LPSAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLALDQNQL---KSIPHGAFD 156
Query: 372 NLKLFDLSYNKFYGELSSNWWNCPQLGIL 400
L S Y L N W+C I+
Sbjct: 157 RLS----SLTHAY--LFGNPWDCECRDIM 179
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 2e-16
Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 71/293 (24%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT----GETTHQKEFLSEIKAL 741
+ ++F+ IG+G +G V + + A+K ++ E + E++ +
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNV---FKELQIM 69
Query: 742 TGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL--------------ARILSSETATEM 786
G+ H +V +Y F F+V + L G L ++ E
Sbjct: 70 QGLEHPFLVNLWYSFQDEED-MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE----- 123
Query: 787 DWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846
+ AL Y+ ++ I+HRD+ N+LLD H++DF A +L ++
Sbjct: 124 -----------LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169
Query: 847 SNWSELAGTYGYVAPEL-------AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899
+ +AGT Y+APE+ Y+ V D +S GV A E+++G+ P + SS
Sbjct: 170 QITT-MAGTKPYMAPEMFSSRKGAGYSFAV----DWWSLGVTAYELLRGRRPYHIRSS-- 222
Query: 900 DSSLPGANMNEAIDHMFDARLP-PPWLEVGVEDKLKSIIEVALSCVDANPERR 951
+ E + + P + LK ++E NP++R
Sbjct: 223 ------TSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEP-------NPDQR 262
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 3e-16
Identities = 66/344 (19%), Positives = 112/344 (32%), Gaps = 96/344 (27%)
Query: 697 IGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNI 749
+GRG +G V +A+ + TVAVK L + + +SE+K L + H N+
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHLNV 88
Query: 750 VKFYGFCSHARHSFL----------VYEYLER------------GSLARILSSETATEMD 787
V G C+ + + YL + A +D
Sbjct: 89 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVD 148
Query: 788 WSKRVNVIKGVAHALSYMHHECRPP----------------------------------- 812
+R++ I + S E +
Sbjct: 149 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEF 208
Query: 813 -----IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV-----APE 862
+HRD++++N+LL + + DFG A+ + D + + APE
Sbjct: 209 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY---VRKGDARLPLKWMAPE 265
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA--RL 920
+ T + DV+SFGVL E+ SL S PG ++E R+
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIF----------SLGASPYPGVKIDEEFCRRLKEGTRM 315
Query: 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964
P + + + L C P +RP + + L
Sbjct: 316 RAP------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 7e-16
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 687 SINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFT----GETTHQKEFLSEIKAL 741
+++ IGRG +G V + A+K L F ++ F E +
Sbjct: 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF---FWEERDIM 123
Query: 742 TGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH 800
+V+ FY F R+ ++V EY+ G L ++S+ E W++ V
Sbjct: 124 AFANSPWVVQLFYAFQD-DRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFY--TAEVVL 179
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELA-GTYG 857
AL +H +HRDV N+LLD H+ +DFGT + + + A GT
Sbjct: 180 ALDAIHSMG---FIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 234
Query: 858 YVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
Y++PE+ +CD +S GV E++ G P
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 80.2 bits (198), Expect = 7e-16
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT----GETTHQKEFLSEIKAL 741
+F+ IGRG +G V +L + A+K L+ + ET F E L
Sbjct: 72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETAC---FREERDVL 128
Query: 742 TGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSLARILS-SETATEMDWSKRVNVIKGVA 799
+ I Y F + +LV +Y G L +LS E + ++ + +
Sbjct: 129 VNGDSKWITTLHYAFQD-DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFY--LAEMV 185
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELA-GTY 856
A+ +H VHRD+ N+L+D H+ +DFG+ L D + S +A GT
Sbjct: 186 IAIDSVHQLH---YVHRDIKPDNILMD--MNGHIRLADFGSCLKLMEDGTVQSSVAVGTP 240
Query: 857 GYVAPELAYTMKVTEK-----CDVYSFGVLALEVIKGQHP 891
Y++PE+ M+ + CD +S GV E++ G+ P
Sbjct: 241 DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 8e-16
Identities = 53/231 (22%), Positives = 87/231 (37%), Gaps = 53/231 (22%)
Query: 687 SINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEF----------L 735
+F +G G + +V A EL + A+K L +K
Sbjct: 28 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL---------EKRHIIKENKVPYVT 78
Query: 736 SEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL------ARILSSETA----TE 785
E ++ + H VK Y + Y + G L E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLK 843
+ AL Y+H + I+HRD+ +N+LL+ + H+ +DFGTAK+L
Sbjct: 139 ------------IVSALEYLHGK---GIIHRDLKPENILLN--EDMHIQITDFGTAKVLS 181
Query: 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
P+S S GT YV+PEL + D+++ G + +++ G P
Sbjct: 182 PESKQARANS-FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 1e-15
Identities = 60/295 (20%), Positives = 106/295 (35%), Gaps = 63/295 (21%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVK-----KLHSFTGETTHQKEFLS-------------- 736
IG+G YG V A A+K KL G +
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 737 -----EIKALTGVRHRNIVKFYGFCSHA--RHSFLVYEYLERGSLARI-----LSSETAT 784
EI L + H N+VK H ++V+E + +G + + LS + A
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA- 139
Query: 785 EMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844
+ + + Y+H++ I+HRD+ N+L+ + ++DFG + K
Sbjct: 140 -------RFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 845 DSSNWSELAGTYGYVAPELAYTMKVT---EKCDVYSFGVLALEVIKGQHPKDLLSSLSDS 901
+ S GT ++APE + + DV++ GV + GQ P D
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM------DE 243
Query: 902 SLPGANMNEAIDHMFDARLPP-PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ ++ I P P + ++D + +++ NPE R +
Sbjct: 244 RIM--CLHSKIKSQ-ALEFPDQPDIAEDLKDLITRMLDK-------NPESRIVVP 288
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 1e-15
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 48/218 (22%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG- 754
IG G YG V A + + VA+KK+ F T+ + L EIK L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 755 FCSHARHSF----LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH---------- 800
+ +V + +E L ++L ++ + H
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSN-------------DHICYFLYQILR 139
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG---TYG 857
L Y+H ++HRD+ N+LL+ + + DFG A++ PD + L T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 858 YVAPEL-----AYTMKVTEKCDVYSFG-VLALEVIKGQ 889
Y APE+ YT + D++S G +LA E++ +
Sbjct: 197 YRAPEIMLNSKGYTKSI----DIWSVGCILA-EMLSNR 229
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 1e-15
Identities = 62/275 (22%), Positives = 101/275 (36%), Gaps = 35/275 (12%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGV 744
+ N F + +G+GG+G V ++ +G A KKL + + L+E + L V
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 745 RHRNIVK-FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALS 803
R +V Y + + LV + G L + ++ V + L
Sbjct: 242 NSRFVVSLAYAYETKD-ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAP 861
+H E IV+RD+ +N+LLD H+ SD G A + + GT GY+AP
Sbjct: 301 DLHRER---IVYRDLKPENILLD--DHGHIRISDLGLAVHVPEGQTIKG-RVGTVGYMAP 354
Query: 862 EL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917
E+ YT D ++ G L E+I GQ P + +
Sbjct: 355 EVVKNERYTFSP----DWWALGCLLYEMIAGQSP-----------FQQRKKKIKREEVER 399
Query: 918 ARL-PPPWLEVGVEDKLKSIIEVALSCVDANPERR 951
P + +S+ L +P R
Sbjct: 400 LVKEVPEEYSERFSPQARSLCSQLL---CKDPAER 431
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 1e-15
Identities = 65/286 (22%), Positives = 102/286 (35%), Gaps = 54/286 (18%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEF----------L 735
+ F + +GRGG+G V+ ++ +G A KKL K+ +
Sbjct: 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKL---------NKKRLKKRKGYQGAM 233
Query: 736 SEIKALTGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNV 794
E K L V R IV Y F + LV + G + + + + + +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 795 IKG--VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWS 850
+ L ++H I++RD+ +NVLLD + +V SD G A LK +
Sbjct: 293 FYTAQIVSGLEHLHQRN---IIYRDLKPENVLLD--DDGNVRISDLGLAVELKAGQTKTK 347
Query: 851 ELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGA 906
AGT G++APEL Y V D ++ GV E+I + P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSV----DYFALGVTLYEMIAARGP-----------FRAR 392
Query: 907 NMNEAIDHMFDARL-PPPWLEVGVEDKLKSIIEVALSCVDANPERR 951
+ L K E L +PE+R
Sbjct: 393 GEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL---QKDPEKR 435
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 2e-15
Identities = 49/239 (20%), Positives = 90/239 (37%), Gaps = 31/239 (12%)
Query: 673 LTYEGKLVYEEIIRSINNFDESF----CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGET 728
+ +G+ ++I ++ + I G YG+V G VA+K++ + +
Sbjct: 2 MQAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDG 61
Query: 729 THQKEF---------LSEIKALTGVRHRNIVKFYG-FCSHARHSF----LVYEYLERGSL 774
L EI+ L H NI+ F + LV E + L
Sbjct: 62 RTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DL 120
Query: 775 ARILSSETATEMDWSKRV---NVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA 831
A+++ + + +++ G L +H +VHRD+ N+LL +
Sbjct: 121 AQVIHDQRIVISPQHIQYFMYHILLG----LHVLH---EAGVVHRDLHPGNILLADNNDI 173
Query: 832 HVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQ 889
+ DF A+ D +N + Y APEL T+ D++S G + E+ +
Sbjct: 174 TICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 2e-15
Identities = 48/210 (22%), Positives = 80/210 (38%), Gaps = 36/210 (17%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY-- 753
IG G G V A + VA+KKL TH K E+ + V H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 754 ----GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH--------- 800
+ ++V E ++ +L +++ E E
Sbjct: 93 FTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHE--------------RMSYLLYQML 137
Query: 801 -ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV 859
+ ++H I+HRD+ N+++ + + DFG A+ + T Y
Sbjct: 138 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYR 193
Query: 860 APELAYTMKVTEKCDVYSFGVLALEVIKGQ 889
APE+ M E D++S G + E+IKG
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKGG 223
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 3e-15
Identities = 50/142 (35%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 147 SIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGN-LSNL 205
S+P G + L L+ N L L+SL LYL N L S+P+ + N L++L
Sbjct: 21 SVP-TGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSL 78
Query: 206 VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLR 264
YL L N L+ F L +L +L L+ NQL S+P + L L DL L QNQL+
Sbjct: 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLK 137
Query: 265 GTVPSSLSNLSSLEILHLYDNQ 286
L+SL+ + L+DN
Sbjct: 138 SVPDGVFDRLTSLQYIWLHDNP 159
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPEL-GLLTDL 469
+P I T LD +N L LTSL L L GN+L +P + LT L
Sbjct: 22 VPTGIPAQTT--YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSL 78
Query: 470 GYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHNLLR 528
YL+LS N+ G L +L L +++N+ Q +P + KL QL +L L N L+
Sbjct: 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL-QSLPDGVFDKLTQLKDLRLYQNQLK 137
Query: 529 GEIPPEIC-NLESLEKLNLSHN 549
+P + L SL+ + L N
Sbjct: 138 S-VPDGVFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 4e-09
Identities = 42/125 (33%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 190 SLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGN 249
S+P IP+ L L+ N L+ F L LT+L L N+L S+P + N
Sbjct: 21 SVPTGIPAQTTYLD------LETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFN 73
Query: 250 -LKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF---MNLNSLS 305
L LT L+LS NQL+ L+ L+ L L NQL +P G F L L
Sbjct: 74 KLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQS-LPD--GVFDKLTQLKDLR 130
Query: 306 VGGNQ 310
+ NQ
Sbjct: 131 LYQNQ 135
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 6e-09
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVLHMFVNHLNG 146
YLDL N L LT L L L N +P+ + LT+L L++ N L
Sbjct: 32 YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQ- 89
Query: 147 SIPE--IGHLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNSLPGSIPSSI-GNL 202
S+P L+ LK LAL+ N L +P + L+ L L LY N L S+P + L
Sbjct: 90 SLPNGVFDKLTQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRL 147
Query: 203 SNLVYLFLKKN 213
++L Y++L N
Sbjct: 148 TSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 11/122 (9%)
Query: 74 TLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGN-LTKLKFLNLSSNHFSGKIPSEI-GLL 131
+L F + L+ L L N+L ++P+ + N LT L +LNLS+N +P+ + L
Sbjct: 42 SLPNGVFDELTSLTQLYLGGNKL-QSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKL 99
Query: 132 TNLEVLHMFVNHLNGSIPEIG---HLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLY 187
T L+ L + N L S+P+ G L+ LK+L L N L +P + L+SL ++L+
Sbjct: 100 TQLKELALNTNQLQ-SLPD-GVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLH 156
Query: 188 NN 189
+N
Sbjct: 157 DN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 443 TSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNE 502
L L N L LT L L L N+ G L L YLN+S+N+
Sbjct: 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87
Query: 503 FSQEIPIQL-GKLVQLSELDLSHNLLRGEIPPEICN-LESLEKLNLSHNNLSGSIP 556
Q +P + KL QL EL L+ N L+ +P + + L L+ L L N L S+P
Sbjct: 88 L-QSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVP 140
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 458 GIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLVQ 516
GIP YLDL N G L L L + N+ Q +P + KL
Sbjct: 25 GIP------AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKL-QSLPNGVFNKLTS 77
Query: 517 LSELDLSHNLLRGEIPPEICN-LESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYNE 574
L+ L+LS N L+ +P + + L L++L L+ N L S+P F+ + L + + N+
Sbjct: 78 LTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQ 135
Query: 575 L 575
L
Sbjct: 136 L 136
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 78.0 bits (192), Expect = 5e-15
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 16/200 (8%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY-- 753
IG G G V A + VA+KKL TH K E+ + V H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 754 ----GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ +LV E ++ +L +++ E E + + + + ++H
Sbjct: 130 FTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHER---MSYLLYQML-CGIKHLHSAG 184
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
I+HRD+ N+++ + + DFG A+ S + T Y APE+ M
Sbjct: 185 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 870 TEKCDVYSFGVLALEVIKGQ 889
E D++S G + E+++ +
Sbjct: 241 KENVDIWSVGCIMGEMVRHK 260
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 5e-15
Identities = 60/199 (30%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLS----EIKALTGVRHRNIVK 751
+G G YG V A + + VAVK + + + EI + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 752 FYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRV--NVIKGVAHALSYMHHE 808
FYG +L EY G L RI E D ++R ++ GV Y+H
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGV----VYLHGI 124
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA---GTYGYVAPEL-- 863
I HRD+ +N+LLD +SDFG A + + ++ L GT YVAPEL
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-RLLNKMCGTLPYVAPELLK 180
Query: 864 --AYTMKVTEKCDVYSFGV 880
+ E DV+S G+
Sbjct: 181 RREFH---AEPVDVWSCGI 196
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 6e-15
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 29/198 (14%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-----FLSEIKALTGVRHRNIV 750
+G G Y +VYK +G VA+K++ +E + EI + ++H NIV
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVK------LDSEEGTPSTAIREISLMKELKHENIV 66
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYMH 806
+ Y LV+E+++ L + + S T +N++K L++ H
Sbjct: 67 RLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL--- 863
I+HRD+ +N+L++ + + DFG A+ + +S T Y AP++
Sbjct: 126 ENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 864 --AYTMKVTEKCDVYSFG 879
Y+ + D++S G
Sbjct: 183 SRTYSTSI----DIWSCG 196
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 6e-15
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 686 RSINNFD-ESFCIGRGGYGSVYKA---ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKAL 741
R + F+ E +GRG YG VYKA + A+K++ + EI L
Sbjct: 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA----CREIALL 72
Query: 742 TGVRHRNIVKFYG-FCSHARHS-FLVYEYLERGSLARILSSETATEMDWSKRV---NVIK 796
++H N++ F SHA +L+++Y E L I+ A++ + ++K
Sbjct: 73 RELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVK 131
Query: 797 GVAH----ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH----VSDFGTAKL----LKP 844
+ + + Y+H ++HRD+ N+L+ E ++D G A+L LKP
Sbjct: 132 SLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188
Query: 845 DSSNWSELAGTYGYVAPEL-----AYTMKVTEKCDVYSFG 879
+ + T+ Y APEL YT + D+++ G
Sbjct: 189 LADLDPVVV-TFWYRAPELLLGARHYTKAI----DIWAIG 223
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 7e-15
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 25/215 (11%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEF-----LSEIK 739
+S+ ++ +G G YG V K +G VA+KK + + + EIK
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFL-----ESDDDKMVKKIAMREIK 76
Query: 740 ALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVA 799
L +RH N+V C + +LV+E+++ ++ L +D+ + +
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLEL-FPNGLDYQVVQKYLFQII 134
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV 859
+ + + H I+HRD+ +N+L+ + DFG A+ L + + T Y
Sbjct: 135 NGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR 191
Query: 860 APEL-----AYTMKVTEKCDVYSFGVLALEVIKGQ 889
APEL Y V DV++ G L E+ G+
Sbjct: 192 APELLVGDVKYGKAV----DVWAIGCLVTEMFMGE 222
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 8e-15
Identities = 67/280 (23%), Positives = 105/280 (37%), Gaps = 50/280 (17%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLS-EIKALTGVRHRNIVKFYG 754
IG G +G + + VAVK + E + EI +RH NIV+F
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIE----RGAAIDENVQREIINHRSLRHPNIVRFKE 83
Query: 755 FCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRV--NVIKGVAHALSYMHHECRP 811
H ++ EY G L RI ++ +E D ++ ++ GV SY H
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSE-DEARFFFQQLLSGV----SYCHSMQ-- 136
Query: 812 PIVHRDVSSKNVLLDFEYEAH--VSDFGTAKLLKPDSSNWSELA---GTYGYVAPEL--- 863
I HRD+ +N LLD + DFG +K S+ GT Y+APE+
Sbjct: 137 -ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLLR 191
Query: 864 -AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA--RL 920
Y K DV+S GV ++ G +P + D P + + I + +
Sbjct: 192 QEYDGK---IADVWSCGVTLYVMLVGAYPFE------DPEEP-RDYRKTIQRILSVKYSI 241
Query: 921 PPP-WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
P + + I A+P R ++ +
Sbjct: 242 PDDIRISPECCHLISRIF-------VADPATRISIPEIKT 274
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 9e-15
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 184 LYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243
LYL N +P + N +L + L N + SF + +L L LS N+L I
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CI 93
Query: 244 PQEI-GNLKLLTDLSLSQNQLRGTVP-SSLSNLSSLEILHLYDNQL 287
P LK L LSL N + VP + ++LS+L L + N L
Sbjct: 94 PPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPL 138
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 2e-14
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 190 SLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-G 248
LP IP + L +L N +P + LT ++LSNN++S ++ +
Sbjct: 24 VLPKGIPRDVTEL------YLDGNQFTL-VPKELSNYKHLTLIDLSNNRIS-TLSNQSFS 75
Query: 249 NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLS 305
N+ L L LS N+LR P + L SL +L L+ N +S +P+ G F +L++LS
Sbjct: 76 NMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISV-VPE--GAFNDLSALS 129
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 3e-09
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289
T+L L NQ + +P+E+ N K LT + LS N++ S SN++ L L L N+L
Sbjct: 34 TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC 92
Query: 290 HIPQEIGNFM---NLNSLSVGGNQ 310
IP F +L LS+ GN
Sbjct: 93 -IPP--RTFDGLKSLRLLSLHGND 113
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 7e-09
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 28/141 (19%)
Query: 124 IPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVG 183
+P I ++ L++ N E+ + L + L N +
Sbjct: 25 LPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRI---------------- 66
Query: 184 LYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243
++L S N++ L+ L L N LR P +F L+ L L L N +S +
Sbjct: 67 -----STLS---NQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VV 117
Query: 244 PQEI-GNLKLLTDLSLSQNQL 263
P+ +L L+ L++ N L
Sbjct: 118 PEGAFNDLSALSHLAIGANPL 138
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 3e-08
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 89 LDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGL---LTNLEVLHMFVNHLN 145
L L+ NQ +P + N L ++LS+N S + + +T L L + N L
Sbjct: 36 LYLDGNQF-TLVPKELSNYKHLTLIDLSNNRIS-TLSN--QSFSNMTQLLTLILSYNRLR 91
Query: 146 GSIPE--IGHLSSLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNN 189
IP L SL+ L+L GN + +P +LS+L L + N
Sbjct: 92 -CIPPRTFDGLKSLRLLSLHGNDISV-VPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVLH 138
S + HL+ +DL+ N++ N+T+L L LS N IP L +L +L
Sbjct: 50 LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC-IPPRTFDGLKSLRLLS 108
Query: 139 MFVNHLNGSIPEIG---HLSSLKNLALDGNHLD 168
+ N ++ +PE G LS+L +LA+ N L
Sbjct: 109 LHGNDIS-VVPE-GAFNDLSALSHLAIGANPLY 139
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 5e-07
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 448 LILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEI 507
L L+GNQ + +P EL L +DLS NR S + + +L L +S N + I
Sbjct: 36 LYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL-RCI 93
Query: 508 PIQL-GKLVQLSELDLSHNLLRGEIPPEI-CNLESLEKLNLSHN 549
P + L L L L N + +P +L +L L + N
Sbjct: 94 PPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Query: 399 ILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGG 458
L + GN T +P E+ N L +D S+N + +N+T L LIL+ N+L
Sbjct: 35 ELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-C 92
Query: 459 IPPELGL---LTDLGYLDLSANRFSKSIP-GNMGYLLKLHYLNMSSN 501
IPP L L L L N +P G L L +L + +N
Sbjct: 93 IPP--RTFDGLKSLRLLSLHGNDI-SVVPEGAFNDLSALSHLAIGAN 136
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 1e-14
Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 42/274 (15%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLS-EIKALTGVRHRNIVKFYG 754
+G G +G V + +G VAVK L+ + + EI+ L RH +I+K Y
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 755 FCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
S F+V EY+ G L I + E + + + + + Y H +
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDE---KESRRLFQQILSGVDYCHRHM---V 137
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA---GTYGYVAPEL----AYT 866
VHRD+ +NVLLD A ++DFG + ++ L G+ Y APE+ Y
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----LRTSCGSPNYAAPEVISGRLYA 193
Query: 867 MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP-PPWL 925
+ D++S GV+ ++ G P D D +P + + I D P +L
Sbjct: 194 ---GPEVDIWSSGVILYALLCGTLPFD------DDHVP--TLFKKI---CDGIFYTPQYL 239
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
V LK +++V +P +R ++ + +
Sbjct: 240 NPSVISLLKHMLQV-------DPMKRATIKDIRE 266
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 1e-14
Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 77/291 (26%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLS-EIKALTGVRHRNIVKFYG 754
+G G +G V A + VA+K + + + + EI L +RH +I+K Y
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 755 FCSHARHSFLVYEY---------LERGSL----AR-----ILSSETATEMDWSKRVNVIK 796
+ +V EY +E+ + R I+
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIIC----------------- 119
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA--- 853
A+ Y H IVHRD+ +N+LLD ++DFG + ++ + L
Sbjct: 120 ----AIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG----NFLKTSC 168
Query: 854 GTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN 909
G+ Y APE+ Y + DV+S G++ ++ G+ P D D +P N+
Sbjct: 169 GSPNYAAPEVINGKLYA---GPEVDVWSCGIVLYVMLVGRLPFD------DEFIP--NLF 217
Query: 910 EAIDHMFDARLP-PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
+ + P +L G + ++ +I +P +R +Q + +
Sbjct: 218 KKV---NSCVYVMPDFLSPGAQSLIRRMIVA-------DPMQRITIQEIRR 258
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 1e-14
Identities = 48/240 (20%), Positives = 87/240 (36%), Gaps = 62/240 (25%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK---- 751
+G G +G V + ++ SG A+KK+ + E+ + + H NI+K
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKV------LQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR----VN------------VI 795
FY + + + + + +N V+
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 796 KGVAH-------------------ALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSD 835
K A+ ++H I HRD+ +N+L++ + + D
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCD 185
Query: 836 FGTAKLLKPDSSNWSELAGTYGYVAPEL-----AYTMKVTEKCDVYSFG-VLALEVIKGQ 889
FG+AK L P + + + + Y APEL YT + D++S G V E+I G+
Sbjct: 186 FGSAKKLIPSEPSVAYICSRF-YRAPELMLGATEYTPSI----DLWSIGCVFG-ELILGK 239
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 77.2 bits (190), Expect = 1e-14
Identities = 55/221 (24%), Positives = 86/221 (38%), Gaps = 33/221 (14%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT----GETTH---QKEFLSEI 738
++N+F IGRGG+G VY +G A+K L T ++ LS +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 739 KALTGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG 797
IV Y F + + + + G L LS +
Sbjct: 247 ST---GDCPFIVCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFY--AAE 300
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELAGT 855
+ L +MH+ +V+RD+ N+LLD HV SD G A + GT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLD--EHGHVRISDLGLACDFSKKKPH--ASVGT 353
Query: 856 YGYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+GY+APE+ AY D +S G + ++++G P
Sbjct: 354 HGYMAPEVLQKGVAYDSSA----DWFSLGCMLFKLLRGHSP 390
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-14
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 38/211 (18%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY-- 753
+G G YG+V A + +G VA+KKL+ K E++ L +RH N++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 754 ----GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH--------- 800
+LV ++ L +++ E E
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGE-------------DRIQFLVYQML 138
Query: 801 -ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYV 859
L Y+H I+HRD+ N+ ++ + E + DFG A+ + + T Y
Sbjct: 139 KGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---MTGYVVTRWYR 192
Query: 860 APELAYT-MKVTEKCDVYSFGVLALEVIKGQ 889
APE+ M+ T+ D++S G + E+I G+
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 3e-14
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 39/214 (18%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-----FLSEIK 739
SI+ + +G G YG VYKA + + +TVA+K++ H++E + E+
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR-----LEHEEEGVPGTAIREVS 85
Query: 740 ALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVA 799
L ++HRNI++ H L++EY E L + + M VIK
Sbjct: 86 LLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSM------RVIKSFL 138
Query: 800 H----ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH-----VSDFGTAKLLKPDSSNWS 850
+ +++ H +HRD+ +N+LL + + DFG A+ ++
Sbjct: 139 YQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFT 195
Query: 851 ELAGTYGYVAPEL-----AYTMKVTEKCDVYSFG 879
T Y PE+ Y+ V D++S
Sbjct: 196 HEIITLWYRPPEILLGSRHYSTSV----DIWSIA 225
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 3e-14
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 16/173 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEF-----LSEIKALTGVRHRNIV 750
IG G YG V+K +G VA+KK + L EI+ L ++H N+V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFL-----ESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
R LV+EY + ++ L + ++ A+++ H
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDH-TVLHELDR-YQRGVPEHLVKSITWQTLQAVNFCHKHN- 122
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL 863
+HRDV +N+L+ + DFG A+LL S + + T Y +PEL
Sbjct: 123 --CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 3e-14
Identities = 60/199 (30%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLS----EIKALTGVRHRNIVK 751
+G G YG V A + + VAVK + + + EI + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 752 FYGFCSHARHSFLVYEYLERGSL-ARILSSETATEMDWSKRV--NVIKGVAHALSYMHHE 808
FYG +L EY G L RI E D ++R ++ GV Y+H
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGV----VYLHGI 124
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELA---GTYGYVAPEL-- 863
I HRD+ +N+LLD +SDFG A + + ++ L GT YVAPEL
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-RLLNKMCGTLPYVAPELLK 180
Query: 864 --AYTMKVTEKCDVYSFGV 880
+ E DV+S G+
Sbjct: 181 RREFH---AEPVDVWSCGI 196
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 4e-14
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 38/212 (17%)
Query: 696 CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G G YGSV A + +G VAVKKL H K E++ L ++H N++
Sbjct: 36 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 755 FC--SHARHSF----LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH-------- 800
+ + F LV + L I+ + T+ H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTD-------------DHVQFLIYQI 141
Query: 801 --ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGY 858
L Y+H I+HRD+ N+ ++ + E + DFG A + + + T Y
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEMTGYVATRWY 195
Query: 859 VAPELAYT-MKVTEKCDVYSFGVLALEVIKGQ 889
APE+ M + D++S G + E++ G+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 5e-14
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 57/227 (25%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY-- 753
+G GG G V+ A + VA+KK+ T + K L EIK + + H NIVK +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKI-VLT-DPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 754 --------GFCSHARHSF----LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH- 800
+ +V EY+E LA +L E H
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLE-------------EHA 122
Query: 801 ---------ALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSSNWS 850
L Y+H ++HRD+ N+ ++ E + DFG A+++ P S+
Sbjct: 123 RLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKG 179
Query: 851 ELAG---TYGYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGQ 889
L+ T Y +P L YT + D+++ G + E++ G+
Sbjct: 180 HLSEGLVTKWYRSPRLLLSPNNYTKAI----DMWAAGCIFAEMLTGK 222
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 9e-14
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 66/237 (27%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEF----------L 735
++N F+ +G+G +G V + +G A+K L +KE L
Sbjct: 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL---------KKEVIVAKDEVAHTL 196
Query: 736 SEIKALTGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL--------------ARILSS 780
+E + L RH + Y F +H V EY G L AR +
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHD-RLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 255
Query: 781 ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGT 838
E + AL Y+H E +V+RD+ +N++LD + H+ +DFG
Sbjct: 256 E----------------IVSALDYLHSEKN--VVYRDLKLENLMLD--KDGHIKITDFGL 295
Query: 839 AKLLKPDSSNWSELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
K D + GT Y+APE+ Y V D + GV+ E++ G+ P
Sbjct: 296 CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAV----DWWGLGVVMYEMMCGRLP 348
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 9e-14
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG- 754
+G G YGSV A + SG+ VA+KKL K E+ L ++H N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 755 FCSHARHS-----FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
F + +LV +++ L +I+ + + E ++KG L Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQYLVYQMLKG----LKYIH--- 143
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-MK 868
+VHRD+ N+ ++ + E + DFG A+ + + T Y APE+ + M
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMH 200
Query: 869 VTEKCDVYSFGVLALEVIKGQ 889
+ D++S G + E++ G+
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGK 221
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 9e-14
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 26/172 (15%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEF----LSEI-- 738
+ + ++ IG G YG+VYKA + SG VA+K + + E+
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VPNGGGGGGGLPISTVREVAL 64
Query: 739 -KALTGVRHRNIVKFYGFCSHARHS-----FLVYEYLERGSLARILSSETATEMDWSKRV 792
+ L H N+V+ C+ +R LV+E++++ L L +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP----A 119
Query: 793 NVIKGVAH----ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840
IK + L ++H C IVHRD+ +N+L+ ++DFG A+
Sbjct: 120 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 168
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 1e-13
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 45/221 (20%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-F----LSEIK 739
++ +++ IG+G +G V+KA +G VA+KK+ ++KE F L EIK
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-----MENEKEGFPITALREIK 68
Query: 740 ALTGVRHRNIVKFYGFCSHARHS--------FLVYEYLERGSLARILSSETATEMDWSKR 791
L ++H N+V C +LV+++ E LA +LS+ +
Sbjct: 69 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN-----VLVKFT 122
Query: 792 VNVIKGVAH----ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL-KPDS 846
++ IK V L Y+H I+HRD+ + NVL+ + ++DFG A+ +
Sbjct: 123 LSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179
Query: 847 SNWSELAG---TYGYVAPEL-----AYTMKVTEKCDVYSFG 879
S + T Y PEL Y + D++ G
Sbjct: 180 SQPNRYTNRVVTLWYRPPELLLGERDYGPPI----DLWGAG 216
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 1e-13
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKE-----FLSEIKALTGVRHRNIVK 751
IG G YG VYKA+ G+T A+KK+ + E + EI L ++H NIVK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR-----LEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYMHH 807
Y + LV+E+L++ L ++L ++ K ++Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQ-DLKKLLDV-CEGGLE----SVTAKSFLLQLLNGIAYCHD 118
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL---- 863
++HRD+ +N+L++ E E ++DFG A+ ++ T Y AP++
Sbjct: 119 RR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 864 -AYTMKVTEKCDVYSFG 879
Y+ + D++S G
Sbjct: 176 KKYSTTI----DIWSVG 188
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 2e-13
Identities = 59/285 (20%), Positives = 98/285 (34%), Gaps = 57/285 (20%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG- 754
IG G YG V +A + VA+KK+ + K L EI L + H ++VK
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 755 FCSHARHSF----LVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYMH-H 807
F +V E + ++ + K + N++ G + Y+H
Sbjct: 121 VIPKDVEKFDELYVVLEIADS-DFKKLFRTPVYLTELHIKTLLYNLLVG----VKYVHSA 175
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY----------- 856
I+HRD+ N L++ + V DFG A+ + + S+L +
Sbjct: 176 G----ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 857 ----------GYV------APEL-----AYTMKVTEKCDVYSFG-VLALEVIKGQHPKDL 894
G+V APEL YT + DV+S G + A E++
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAI----DVWSIGCIFA-ELLNMIKENVA 286
Query: 895 LSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEV 939
+ PG++ D+L I +
Sbjct: 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNR-DQLNVIFNI 330
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 2e-13
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 38/210 (18%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYG 754
+GRG Y V++A + + + V VK L +K+ EIK L +R NI+
Sbjct: 44 LGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLAD 98
Query: 755 FCSHARHSF---LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYMHH 807
S LV+E++ ++ +T T+ D I+ + AL Y H
Sbjct: 99 -IVKDPVSRTPALVFEHVNNTDFKQLY--QTLTDYD-------IRFYMYEILKALDYCHS 148
Query: 808 ECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL--- 863
I+HRDV NV++D E+ + + D+G A+ P +A Y + PEL
Sbjct: 149 MG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY-FKGPELLVD 204
Query: 864 --AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
Y + D++S G + +I + P
Sbjct: 205 YQMYDYSL----DMWSLGCMLASMIFRKEP 230
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 2e-13
Identities = 59/279 (21%), Positives = 101/279 (36%), Gaps = 53/279 (18%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG- 754
IGRG YG VY A + + VA+KK++ + K L EI L ++ I++ Y
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 755 FCSHARHSF----LVYEYLERGSLARILSSETATEMDWSKRV--NVIKGVAHALSYMHHE 808
F +V E + L ++ + + K + N++ G +++H
Sbjct: 94 IIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLG----ENFIH-- 146
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY------------ 856
I+HRD+ N LL+ + V DFG A+ + +
Sbjct: 147 -ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK 205
Query: 857 ----GYV------APEL-----AYTMKVTEKCDVYSFG-VLALEVIKGQHPKDLLSSLSD 900
+V APEL YT + D++S G + A E++ +
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSI----DIWSTGCIFA-ELLNMLQSHINDPTNRF 260
Query: 901 SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEV 939
PG++ + R E D+L I +
Sbjct: 261 PLFPGSSCF----PLSPDRNSKKVHEKSNRDQLNIIFNI 295
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 3e-13
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 184 LYLYNNSLPGSIPSS--IGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241
L L +N L G I S G L +LV L LK+N L G P++F + +L+L N++
Sbjct: 34 LLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK- 91
Query: 242 SIPQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN 285
I ++ L L L+L NQ+ +P S +L+SL L+L N
Sbjct: 92 EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 3e-12
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 12/118 (10%)
Query: 190 SLPGSIPSSIGNLSNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQEI- 247
+P IP L L N L FG L L KLEL NQL+ I
Sbjct: 22 EIPRDIPLHTTEL------LLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAF 74
Query: 248 GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLS 305
+ +L L +N+++ L L+ L+LYDNQ+S + G+F +LNSL+
Sbjct: 75 EGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISC-VMP--GSFEHLNSLT 129
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 7e-10
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 158 KNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKKNHL 215
L L+ N L + G L LV L L N L I + S++ L L +N +
Sbjct: 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGENKI 90
Query: 216 RGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQN 261
+ F L +L L L +NQ+S + +L LT L+L+ N
Sbjct: 91 KEISNKMFLGLHQLKTLNLYDNQIS-CVMPGSFEHLNSLTSLNLASN 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 66 LTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKI 124
L S G + P HL L+L NQL I + ++ L L N +I
Sbjct: 41 LGRISSDGLFGRLP-----HLVKLELKRNQL-TGIEPNAFEGASHIQELQLGENKIK-EI 93
Query: 125 PSEI-GLLTNLEVLHMFVNHLNGSIPEIG---HLSSLKNLALDGNHLD 168
+++ L L+ L+++ N ++ + G HL+SL +L L N +
Sbjct: 94 SNKMFLGLHQLKTLNLYDNQIS-CVMP-GSFEHLNSLTSLNLASNPFN 139
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 13/123 (10%)
Query: 458 GIPPELGLLTDLGYLDLSANRFSKSIP-GNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLV 515
IP L L+ N + G G L L L + N+ I
Sbjct: 26 DIP------LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQL-TGIEPNAFEGAS 78
Query: 516 QLSELDLSHNLLRGEIPPEICN-LESLEKLNLSHNNLSGSIPTN-FENMHGLLSIDISYN 573
+ EL L N ++ EI ++ L L+ LNL N +S + FE+++ L S++++ N
Sbjct: 79 HIQELQLGENKIK-EISNKMFLGLHQLKTLNLYDNQIS-CVMPGSFEHLNSLTSLNLASN 136
Query: 574 ELD 576
+
Sbjct: 137 PFN 139
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 399 ILKIAGNNITGGIPPE--IGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS 456
L + N + I + G L +L+ N L G P + + +L L N++
Sbjct: 33 ELLLNDNELGR-ISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK 91
Query: 457 GGIPPELGL---LTDLGYLDLSANRFSKSIP-GNMGYLLKLHYLNMSSN 501
I + L L L+L N+ + G+ +L L LN++SN
Sbjct: 92 -EISN--KMFLGLHQLKTLNLYDNQI-SCVMPGSFEHLNSLTSLNLASN 136
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 4e-13
Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 24/251 (9%)
Query: 649 SQRRKKDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKA 708
+ KK S+++ +A L ++ FD +G G +G V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTA--QLDQFDRIKTLGTGSFGRVMLV 60
Query: 709 EL-PSGDTVAVKKLHSFTGETTHQKE-FLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766
+ SG+ A+K L Q E L+E + L V +VK + ++V
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD 826
EY+ G + L ++ + Y+H +++RD+ +N+L+D
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLTFEYLHSLD---LIYRDLKPENLLID 175
Query: 827 FEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPEL----AYTMKVTEKCDVYSFGV 880
+ ++ +DFG AK + W+ L GT +APE+ Y V D ++ GV
Sbjct: 176 --QQGYIQVTDFGFAK--RVKGRTWT-LCGTPEALAPEIILSKGYNKAV----DWWALGV 226
Query: 881 LALEVIKGQHP 891
L E+ G P
Sbjct: 227 LIYEMAAGYPP 237
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 4e-13
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKE-----FLSEIKALTGVRHRNIVK 751
+G G YG VYKA+ G VA+K++ + E + EI L + H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIR-----LDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYMHH 807
R LV+E++E+ L ++L + + IK + +++ H
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDE-----NKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL---- 863
I+HRD+ +N+L++ + ++DFG A+ +++ T Y AP++
Sbjct: 138 HR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 864 -AYTMKVTEKCDVYSFG 879
Y+ V D++S G
Sbjct: 195 KKYSTSV----DIWSIG 207
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 4e-13
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 33/198 (16%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-----FLSEIKALTGVRHRNIV 750
IG G YG+V+KA + + VA+K++ E L EI L ++H+NIV
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR-----LDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYMH 806
+ + + LV+E+ ++ L + S ++D ++K L + H
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQ-DLKKYFDS-CNGDLD----PEIVKSFLFQLLKGLGFCH 118
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL--- 863
++HRD+ +N+L++ E +++FG A+ +S T Y P++
Sbjct: 119 SRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 864 --AYTMKVTEKCDVYSFG 879
Y+ + D++S G
Sbjct: 176 AKLYSTSI----DMWSAG 189
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 5e-13
Identities = 42/197 (21%), Positives = 74/197 (37%), Gaps = 47/197 (23%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYG 754
+G G G V + + + A+K L + E++ + +IV+
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVD 78
Query: 755 FC----SHARHSFLVYEYLERGSL-ARILS--SETATEMDWSKRVNVIKGVAHALSYMHH 807
+ + +V E L+ G L +RI + TE + S ++K + A+ Y+H
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS---EIMKSIGEAIQYLHS 135
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAH---VSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
I HRDV +N+L + ++DFG AK Y
Sbjct: 136 IN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET---------TGEKYD------- 176
Query: 865 YTMKVTEKCDVYSFGVL 881
+ CD++S GV+
Sbjct: 177 ------KSCDMWSLGVI 187
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 7e-13
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 184 LYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243
L L +N L L+ L L L +N ++ F L KLT L L N+L S+
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SL 91
Query: 244 PQEI-GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQ 286
P + L L +L+L NQL+ L+SL+ + L+ N
Sbjct: 92 PNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 135
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 190 SLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-G 248
S+P IPSS L L+ N L+ F L +LTKL LS NQ+ S+P +
Sbjct: 21 SVPTGIPSS------ATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFD 73
Query: 249 NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLS 305
L LT L L +N+L+ L+ L+ L L NQL +P G F L SL
Sbjct: 74 KLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKS-VPD--GIFDRLTSLQ 127
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGL---LTNLEVLHMFVNHL 144
L+L N+L LT+L L+LS N +P G+ LT L +L++ N L
Sbjct: 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPD--GVFDKLTKLTILYLHENKL 88
Query: 145 NGSIPEIG---HLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNN 189
S+P G L+ LK LALD N L L+SL ++L+ N
Sbjct: 89 Q-SLPN-GVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 458 GIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL-GKLVQ 516
GIP + L+L +N+ G L +L L++S N+ Q +P + KL +
Sbjct: 25 GIP------SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQI-QSLPDGVFDKLTK 77
Query: 517 LSELDLSHNLLRGEIPPEIC-NLESLEKLNLSHNNLSGSIP 556
L+ L L N L+ +P + L L++L L N L S+P
Sbjct: 78 LTILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQLK-SVP 116
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 103 PIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIG---HLSSLKN 159
P G + L L SN LT L L + N + S+P+ G L+ L
Sbjct: 23 PTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPD-GVFDKLTKLTI 80
Query: 160 LALDGNHLDGPIPVSI-GNLSSLVGLYLYNNSLPGSIPSSI-GNLSNLVYLFLKKN 213
L L N L +P + L+ L L L N L S+P I L++L ++L N
Sbjct: 81 LYLHENKLQS-LPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 41/143 (28%), Positives = 57/143 (39%), Gaps = 34/143 (23%)
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL---LT 467
+P I ++ L+ SN L LT L L L+ NQ+ +P G+ LT
Sbjct: 22 VPTGIPSSAT--RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPD--GVFDKLT 76
Query: 468 DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLL 527
L L L N+ +S+P + F KL QL EL L N L
Sbjct: 77 KLTILYLHENKL-QSLPNGV---------------FD--------KLTQLKELALDTNQL 112
Query: 528 RGEIPPEIC-NLESLEKLNLSHN 549
+ +P I L SL+K+ L N
Sbjct: 113 KS-VPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPI-GNLTKLKFLNLSSNHFSGKIPSEIGL---LTNLE 135
F + L+ L L++NQ+ ++P + LTKL L L N +P+ G+ LT L+
Sbjct: 48 FDKLTQLTKLSLSQNQI-QSLPDGVFDKLTKLTILYLHENKLQ-SLPN--GVFDKLTQLK 103
Query: 136 VLHMFVNHLNGSIPE--IGHLSSLKNLALDGN 165
L + N L S+P+ L+SL+ + L N
Sbjct: 104 ELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 134
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 1e-12
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 34/198 (17%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKE-----FLSEIKALTGVRHRNIV 750
+G G Y +VYK + + VA+K++ +E + E+ L ++H NIV
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIR------LEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH----ALSYMH 806
+ + LV+EYL++ L + L ++ ++ +K L+Y H
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDK-DLKQYLDD-CGNIIN----MHNVKLFLFQLLRGLAYCH 117
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPEL--- 863
+ ++HRD+ +N+L++ E ++DFG A+ + + T Y P++
Sbjct: 118 RQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 864 --AYTMKVTEKCDVYSFG 879
Y+ ++ D++ G
Sbjct: 175 STDYSTQI----DMWGVG 188
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 2e-12
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 27/171 (15%)
Query: 683 EIIRSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEF------- 734
++ +++ +G G + +VYKA + + VA+KK+ H+ E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIK-----LGHRSEAKDGINRT 58
Query: 735 -LSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVN 793
L EIK L + H NI+ H + LV++++E L I+ +
Sbjct: 59 ALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKD-----NSLVLTPS 112
Query: 794 VIKGVAH----ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840
IK L Y+H I+HRD+ N+LLD ++DFG AK
Sbjct: 113 HIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 70.7 bits (172), Expect = 2e-12
Identities = 95/657 (14%), Positives = 194/657 (29%), Gaps = 187/657 (28%)
Query: 321 QSGSLQY-----FSVHDNYFIGSL-----PKTLRNCTSLERVRLEKNQLIGNISDDFGIY 370
++G QY SV ++ F+ + ++ S E E + +I + G
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKE----EIDHIIMSKDAVSGTL 65
Query: 371 PNLKLFDL-------SYNKFYGE-LSSNW-WNCPQLGIL-KIAGNNITGGIPPEIGNATQ 420
+LF KF E L N+ + ++ I + +
Sbjct: 66 ---RLFWTLLSKQEEMVQKFVEEVLRINYKF------LMSPIKTEQRQPSMMTRMYIEQ- 115
Query: 421 LHELDFSSNHLVGK--VPLE---------LANLTSLNDLILNGNQLSGGIPPELG---LL 466
+ ++ N + K V L L +++++G G G +
Sbjct: 116 -RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG---VLGS----GKTWVA 167
Query: 467 TDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNL 526
D+ + + + + +LN+ + + + L KL+ + + +
Sbjct: 168 LDV----CLSYKVQCKMDFKI------FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217
Query: 527 LRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSID-ISYNELDGPIPSIEAF 585
+ E L + +EN LL + + + AF
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSK-------PYEN--CLLVLLNVQNAKA------WNAF 262
Query: 586 ----------RHAPV-EALQGNKG----LCGEVSGLQPCKALKSYKHVHRKWRTVLFTVL 630
R V + L L L P + + K+ L
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS----LLLKYLDCRPQDL 318
Query: 631 PLLAALA--LIIGLIGMFVCSQRRKKDSQEQEEN--NRNNQALLSIL--------TYEGK 678
P + +I +D +N + N L +I+ E +
Sbjct: 319 PREVLTTNPRRLSIIA------ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR 372
Query: 679 LVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEI 738
+++ + S+ F S I ++ + S V V KLH ++ KE I
Sbjct: 373 KMFDRL--SV--FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI 428
Query: 739 --------------KALTGVRHRNIVKFY----GFCSHAR---------HSFLVY----- 766
AL HR+IV Y F S +S + +
Sbjct: 429 PSIYLELKVKLENEYAL----HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484
Query: 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD 826
E+ ER +L R++ + + ++ K + H+ + N L
Sbjct: 485 EHPERMTLFRMV----FLDFRFLEQ----K--------IRHDSTAWNASGSIL--NTLQQ 526
Query: 827 FE-YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLA 882
+ Y+ ++ D + + L P++ + ++ D+ ++A
Sbjct: 527 LKFYKPYICD---------NDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 6e-10
Identities = 59/368 (16%), Positives = 115/368 (31%), Gaps = 95/368 (25%)
Query: 660 EENNRNNQA--LLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTV- 716
+ + L L + + + ++ + + + F + + + PS T
Sbjct: 56 MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP--IKTEQRQ--PSMMTRM 111
Query: 717 ---AVKKLHS----FTGETTHQKEFLSEIK-ALTGVRHRNIVKFYGF------------C 756
+L++ F + + +++ AL +R V G C
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC 171
Query: 757 S----HARHSFLVYEYLERGSLARILSSETATEM----------DWSKRVNVIKGVAHAL 802
+ F ++ +L +L S ET EM +W+ R + + +
Sbjct: 172 LSYKVQCKMDFKIF-WL---NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 803 SYMHHECR-----PP-----IVHRDVSSKNVLLDFEYE---------AHVSDFGTAKLLK 843
+ E R P +V +V + F V+DF +A
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287
Query: 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL 903
S + + E + K L EV+ +P+ L S+
Sbjct: 288 HISLDHHSM----TLTPDE---VKSLLLKYLDCRPQDLPREVLTT-NPRRL-------SI 332
Query: 904 PGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPER---------RPNM 954
++ + + +D W V DKL +IIE +L+ ++ R P+
Sbjct: 333 IAESIRDGLAT-WD-----NWKHVNC-DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385
Query: 955 QIVCKLLS 962
I LLS
Sbjct: 386 HIPTILLS 393
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 9e-10
Identities = 83/435 (19%), Positives = 142/435 (32%), Gaps = 114/435 (26%)
Query: 8 NSIEAA-RGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWS--GISCNHAGRIISI 64
+SI+A R LLK K + N LL L V W+ +SC +I+
Sbjct: 228 HSIQAELRRLLKSK----PYENCLL---VLLNVQNAKA-----WNAFNLSC----KIL-- 269
Query: 65 NLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTK-------LKFLNLSS 117
LT T K D + +H+S L+ + LT LK+L+
Sbjct: 270 -LT-TRFKQVTDFLSAATTTHIS---LDHHS---------MTLTPDEVKSLLLKYLDCR- 314
Query: 118 NHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGN 177
+P E+ L TN L + + + + K++ D L I S+
Sbjct: 315 ---PQDLPREV-LTTNPRRLSIIAESI---RDGLATWDNWKHVNCD--KLTTIIESSLNV 365
Query: 178 LSSLVGLYLYNNS--LPGS--IPSSIGNLSNL--------VYLFLKKNHLRGPIPSSFGY 225
L +++ P S IP+ + LS + V + + K
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTIL--LSLIWFDVIKSDVMVVVNK------------- 410
Query: 226 LRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQN---QLRGTVPSSLSNLSSLEILHL 282
L K + +E + + SIP + +L + L ++ + + + L
Sbjct: 411 LHKYSLVEKQPKESTISIPS------IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464
Query: 283 YDNQLSGHIPQEIGNFMNLNSLSVGGNQFT------GFLPQNICQSGSLQYFSVHDNYFI 336
L + IG+ + F FL Q I + S
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS------- 517
Query: 337 GSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQ 396
GS+ T L++++ K I D+ Y L + + F ++ N
Sbjct: 518 GSILNT------LQQLKFYKPY----ICDNDPKYERL-VNAIL--DFLPKIEENLICSKY 564
Query: 397 LGILKIAGNNITGGI 411
+L+IA I
Sbjct: 565 TDLLRIALMAEDEAI 579
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 2e-07
Identities = 73/471 (15%), Positives = 139/471 (29%), Gaps = 124/471 (26%)
Query: 84 SHLSYLD--LNENQLY--GNIP--SPIGNLTKLKFLNLSSNHF--------SGKIPSEIG 129
++ D N+NQ++ N+ P L + L L SGK +
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ-ALLELRPAKNVLIDGVLGSGKTWVALD 169
Query: 130 LLTNLEVLHMFVNHL------NGSIPEIGHLSSLKNL--ALDGNHLDGP-----IPVSIG 176
+ + +V + N + PE L L+ L +D N I + I
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPE-TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 177 N----LSSLVGLYLYNNSL--------PGSI--------------PSSIGN-LSNLVYLF 209
+ L L+ Y N L + + + LS
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 210 LKKNHLRGPI--PSSFGYLRKLTKLELSN--NQLSGSIPQEIGNL-KLLTD--------L 256
+ +H + L K + ++ + P+ + + + + D
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348
Query: 257 SLSQNQLRGTVPSSLSNLSSLEILHLYDN----QLSGHIPQEIGNFMNLNSLSVGGNQFT 312
++ ++L + SSL+ L E ++D S HIP + LS+
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL--------LSLIWFDVI 400
Query: 313 GFLPQNI---CQSGSL-------QYFSVHDNYFIGSLPKTLRNCTSLERVRLEK------ 356
+ SL S+ Y L L N +L R ++
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL--ELKVKLENEYALHRSIVDHYNIPKT 458
Query: 357 ---NQLIGNISDDFGIYPNL----------KLFDLSYNKFYGELSSNWWNCPQLGILKIA 403
+ LI D + Y ++ + L + + L + L KI
Sbjct: 459 FDSDDLIPPYLDQY-FYSHIGHHLKNIEHPERMTL-FRMVF--LDFRF-----LEQ-KIR 508
Query: 404 GNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQ 454
++ I N L +L F ++ P + ++ D + +
Sbjct: 509 HDSTAWNASGSILNT--LQQLKFYKPYICDNDPKYERLVNAILDFLPKIEE 557
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 4e-12
Identities = 58/237 (24%), Positives = 92/237 (38%), Gaps = 67/237 (28%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEF----------L 735
++N+FD +G+G +G V +G A+K L +KE +
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL---------RKEVIIAKDEVAHTV 53
Query: 736 SEIKALTGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL--------------ARILSS 780
+E + L RH + Y F +H V EY G L AR +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHD-RLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 781 ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGT 838
E + AL Y+H +V+RD+ +N++LD + H+ +DFG
Sbjct: 113 E----------------IVSALEYLHSR---DVVYRDIKLENLMLD--KDGHIKITDFGL 151
Query: 839 AKLLKPDSSNWSELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
K D + GT Y+APE+ Y V D + GV+ E++ G+ P
Sbjct: 152 CKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV----DWWGLGVVMYEMMCGRLP 204
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 5e-12
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 686 RSINNFDESFCIGRGGYGSVYKA--ELPSGDTVAVKKLHSFTGETTHQKE-----FLSEI 738
R+ ++ IG G YG V+KA G VA+K++ +E + E+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-----VQTGEEGMPLSTIREV 62
Query: 739 ---KALTGVRHRNIVK----FYGFCSHARHS-FLVYEYLERGSLARILSSETATEMDWSK 790
+ L H N+V+ + LV+E++++ L L +
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP--- 118
Query: 791 RVNVIKGVAH----ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840
IK + L ++H +VHRD+ +N+L+ + ++DFG A+
Sbjct: 119 -TETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 168
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 65.9 bits (160), Expect = 2e-11
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 219 IPSSFGYLRKLTKLELSNNQLSGSIPQE-IGNLKLLTDLSLSQNQLRGTVPSSLSNLSSL 277
LT+L + N Q + + L L +L++ ++ LR P + L
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL 82
Query: 278 EILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312
L+L N L + + ++L L + GN
Sbjct: 83 SRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 63.6 bits (154), Expect = 1e-10
Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPS-SFGYLRKLTKLELSNNQLSGSIPQEI-GNLK 251
+ NL L+++ + L +L L + + L + +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTP 80
Query: 252 LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQL 287
L+ L+LS N L ++ SL+ L L N L
Sbjct: 81 RLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 61.7 bits (149), Expect = 4e-10
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 171 IPVSIGNLSSLVGLYLYNNSLPGSIPS-SIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKL 229
+ +L LY+ N + + L L L + K+ LR P +F + +L
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL 82
Query: 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR 264
++L LS N L S+ + L +L LS N L
Sbjct: 83 SRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 60.1 bits (145), Expect = 1e-09
Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Query: 477 NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQ-LGKLVQLSELDLSHNLLRGEIPPEI 535
+ ++ L L + + + Q + ++ L L +L L + + LR + P+
Sbjct: 17 RDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDA 75
Query: 536 -CNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576
L +LNLS N L + + L + +S N L
Sbjct: 76 FHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 2e-09
Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 4/95 (4%)
Query: 411 IPPEIGNATQLHELDFSSNHLVGKVPLE-LANLTSLNDLILNGNQLSGGIPPE-LGLLTD 468
+ A L EL + + + L L L L +L + + L + P+
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPR 81
Query: 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEF 503
L L+LS N S+ L L L +S N
Sbjct: 82 LSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 55.5 bits (133), Expect = 4e-08
Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 4/102 (3%)
Query: 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPS-SLSNLSSLEILHLYDNQLSGHIPQE 294
+ + + LT+L + Q + L L L L + + L + +
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPD 74
Query: 295 IGNFM-NLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYF 335
+F L+ L++ N L Q SLQ + N
Sbjct: 75 AFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 50.9 bits (121), Expect = 1e-06
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 435 VPLELANLTSLNDLILNGNQLSGGIPPE-LGLLTDLGYLDLSANRFSKSIPGNMGYLLKL 493
L +L +L + Q + L L +L L + + P + +L
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL 82
Query: 494 HYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLR 528
LN+S N + + + + L EL LS N L
Sbjct: 83 SRLNLSFNALES-LSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 2e-06
Identities = 17/96 (17%), Positives = 28/96 (29%), Gaps = 5/96 (5%)
Query: 99 NIPSPIGNLTKLKFLNLSSNHFSGKIPSE-IGLLTNLEVLHMFVNHLNGSIPE--IGHLS 155
+ + L L + + + + L L L + + L +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTP 80
Query: 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSL 191
L L L N L+ + SL L L N L
Sbjct: 81 RLSRLNLSFNALES-LSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 4e-05
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPS-PIGNLTKLKFLNLSSNHFSGKIPSEI-GLLTNLEVL 137
+L+ L + Q ++ + L +L+ L + + + + L L
Sbjct: 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLSRL 85
Query: 138 HMFVNHLNGSIPEIGHLSSLKNLALDGNHLD 168
++ N L + SL+ L L GN L
Sbjct: 86 NLSFNALESLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 8e-05
Identities = 17/86 (19%), Positives = 25/86 (29%), Gaps = 2/86 (2%)
Query: 395 PQLGILKIAGNNITGGIPPE-IGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGN 453
L L I + + +L L + L P L+ L L+ N
Sbjct: 31 ENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90
Query: 454 QLSGGIPPELGLLTDLGYLDLSANRF 479
L + + L L LS N
Sbjct: 91 ALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 48/226 (21%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT----GETTHQKEFLSEIKAL 741
S+ +F +G G +G V+ +G A+K L + H E L
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN---DERLML 60
Query: 742 TGVRHRNIVKFYGFCSHARHSFLVYEYLERGSL------ARILSSETA----TEMDWSKR 791
+ V H I++ +G A+ F++ +Y+E G L ++ + A E
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE------ 114
Query: 792 VNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNW 849
V AL Y+H + I++RD+ +N+LLD H+ +DFG AK +
Sbjct: 115 ------VCLALEYLHSK---DIIYRDLKPENILLD--KNGHIKITDFGFAK--YVPDVTY 161
Query: 850 SELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+ L GT Y+APE+ Y + D +SFG+L E++ G P
Sbjct: 162 T-LCGTPDYIAPEVVSTKPYNKSI----DWWSFGILIYEMLAGYTP 202
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 43/226 (19%)
Query: 687 SINNFDESFCIGRGGYGSVYKAELPSG-DTV---AVKKLHSFTGETTHQKEFLSEIKALT 742
+ F+ +G+G +G V+ + SG D A+K L T + + E L
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 743 GVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL--------------ARILSSETATEMD 787
V H IVK Y F + + +L+ ++L G L + +E
Sbjct: 82 EVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE------ 134
Query: 788 WSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPD 845
+A AL ++H I++RD+ +N+LLD E H+ +DFG +K
Sbjct: 135 ----------LALALDHLHSLG---IIYRDLKPENILLD--EEGHIKLTDFGLSKESIDH 179
Query: 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
GT Y+APE+ T+ D +SFGVL E++ G P
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 4e-11
Identities = 54/365 (14%), Positives = 98/365 (26%), Gaps = 95/365 (26%)
Query: 229 LTKLELSNNQLSG----SIPQEIGNLKLLTDLSLSQNQL--RGTVP--SSLSNLSSLEIL 280
+ L + ++ S+ + + ++ LS N + ++++ LEI
Sbjct: 6 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 65
Query: 281 HLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYF----I 336
D + + L Q + + L + DN F
Sbjct: 66 EFSDIFT--------------GRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111
Query: 337 GSLPKTLRNCTSLERVRLEKNQL-------------IGNISDDFGIYPNLKLFDLSYNKF 383
L L T LE + L N L ++ P L+ N+
Sbjct: 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRL 171
Query: 384 YGE----LSSNWWNCPQLGILKIAGNNITG-GIPPEIGNA----TQLHELDFSSNHL--- 431
+ + + L +K+ N I GI + +L LD N
Sbjct: 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHL 231
Query: 432 ----VGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNM 487
+ L + +L +L LN LS A + +
Sbjct: 232 GSSALAIA---LKSWPNLRELGLNDCLLS----------------ARGAAAVVDAF--SK 270
Query: 488 GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS 547
+ L L + NE + L ++ + L L L+
Sbjct: 271 LENIGLQTLRLQYNEIELDAVRTLKTVID-------------------EKMPDLLFLELN 311
Query: 548 HNNLS 552
N S
Sbjct: 312 GNRFS 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 4e-11
Identities = 52/298 (17%), Positives = 93/298 (31%), Gaps = 65/298 (21%)
Query: 339 LPKTLRNCTSLERVRLEKNQLIGN-----ISDDFGIYPNLKLFDLSYNKFYGELSSNWW- 392
+ L S++ + L N IG +S++ +L++ + S F G +
Sbjct: 24 VFAVLLEDDSVKEIVLSGNT-IGTEAARWLSENIASKKDLEIAEFSDI-FTGRVKDEIPE 81
Query: 393 ----------NCPQLGILKIAGNNITG----GIPPEIGNATQLHELDFSSNHL------- 431
CP+L ++++ N + + T L L +N L
Sbjct: 82 ALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAK 141
Query: 432 ------VGKVPLELANLTSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRF-S 480
V + N L +I N+L G L + + N
Sbjct: 142 IARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201
Query: 481 KSIPGNMGYLLK----LHYLNMSSNEFS----QEIPIQLGKLVQLSELDLSHNLLRGEIP 532
+ I + L L L++ N F+ + I L L EL L+ LL
Sbjct: 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 261
Query: 533 PEICNL------ESLEKLNLSHNN--------LSGSIPTNFENMHGLLSIDISYNELD 576
+ + L+ L L +N L I + LL ++++ N
Sbjct: 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPD---LLFLELNGNRFS 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 1e-09
Identities = 55/355 (15%), Positives = 117/355 (32%), Gaps = 66/355 (18%)
Query: 86 LSYLDLNENQLYG----NIPSPIGNLTKLKFLNLSSNHFSGK----IPSEIGLLTNLEVL 137
+ L + + ++ + + +K + LS N + + I +LE+
Sbjct: 6 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 65
Query: 138 H---MFVNHLNGSIPE--------IGHLSSLKNLALDGNHL--DGPIPVS--IGNLSSLV 182
+F + IPE + L + L N P+ + + L
Sbjct: 66 EFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLE 125
Query: 183 GLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG- 241
LYL+NN L G P + ++ L++ + ++ L + N+L
Sbjct: 126 HLYLHNNGL-G--PQAGAKIARA----LQELAVNKKAKNA----PPLRSIICGRNRLENG 174
Query: 242 ---SIPQEIGNLKLLTDLSLSQNQLR-----GTVPSSLSNLSSLEILHLYDNQLSG---- 289
+ + +LL + + QN +R + L+ L++L L DN +
Sbjct: 175 SMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSS 234
Query: 290 HIPQEIGNFMNLNSLSVGGNQFTGFLPQNI------CQSGSLQYFSVHDNYFIG-----S 338
+ + ++ NL L + + + ++ LQ + N I +
Sbjct: 235 ALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYN-EIELDAVRT 293
Query: 339 LPKTLR-NCTSLERVRLEKNQL------IGNISDDFGIYPNLKLFDLSYNKFYGE 386
L + L + L N+ + I + F +L +L + +
Sbjct: 294 LKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDELDDMEELTD 348
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 6e-07
Identities = 37/235 (15%), Positives = 74/235 (31%), Gaps = 42/235 (17%)
Query: 84 SHLSYLDLNENQLYGNIPSPIGNL----TKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHM 139
L + L++N P+ + T L+ L L +N + + L+ L +
Sbjct: 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG--PQAGAKIARALQELAV 151
Query: 140 FVNHLNGSIPEIGHLSSLKNLALDGNHLDGP----IPVSIGNLSSLVGLYLYNNSL---- 191
+ L+++ N L+ + + L + + N +
Sbjct: 152 NKK--------AKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEG 203
Query: 192 -PGSIPSSIGNLSNLVYLFLKKNHLRGP-----IPSSFGYLRKLTKLELSNNQLS----- 240
+ + L L L+ N + + L +L L++ LS
Sbjct: 204 IEHLLLEGLAYCQELKVLDLQDNTF-THLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262
Query: 241 --GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSL-----SNLSSLEILHLYDNQLS 288
++ N+ L T L L N++ +L + L L L N+ S
Sbjct: 263 AVVDAFSKLENIGLQT-LRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 65.0 bits (158), Expect = 8e-11
Identities = 61/299 (20%), Positives = 110/299 (36%), Gaps = 87/299 (29%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEF----------L 735
+ +F+ +G+G +G V +E + + AVK L +K+ +
Sbjct: 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKIL---------KKDVVIQDDDVECTM 389
Query: 736 SEIKAL-TGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL--------------ARILS 779
E + L + + + F + R + V EY+ G L A +
Sbjct: 390 VEKRVLALPGKPPFLTQLHSCFQTMDRL-YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYA 448
Query: 780 SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFG 837
+E +A L ++ + I++RD+ NV+LD E H+ +DFG
Sbjct: 449 AE----------------IAIGLFFLQSK---GIIYRDLKLDNVMLD--SEGHIKIADFG 487
Query: 838 TAKLLKPDSSNWSELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKD 893
K D GT Y+APE+ Y V D ++FGVL E++ GQ P
Sbjct: 488 MCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSV----DWWAFGVLLYEMLAGQAP-- 541
Query: 894 LLSSLSDSSLPGANMNEAIDHMFDARLP-PPWLEVGVEDKLKSIIEVALSCVDANPERR 951
G + +E + + + P + + +I + + +P +R
Sbjct: 542 ---------FEGEDEDELFQSIMEHNVAYPKSMSK----EAVAICKGLM---TKHPGKR 584
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.3 bits (155), Expect = 1e-10
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 43/227 (18%)
Query: 687 SINNFDESFCIGRGGYGSVYKAELPSG-DT---VAVKKLH-----SFTGETTHQKEFLSE 737
F+ +G+GGYG V++ +G +T A+K L +T H K +E
Sbjct: 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK---AE 71
Query: 738 IKALTGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL------ARILSSETAT----EM 786
L V+H IV Y F + + +L+ EYL G L I +TA E
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFMEDTACFYLAE- 129
Query: 787 DWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKP 844
++ AL ++H + I++RD+ +N++L+ ++ HV +DFG K
Sbjct: 130 -----------ISMALGHLHQK---GIIYRDLKPENIMLN--HQGHVKLTDFGLCKESIH 173
Query: 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891
D + GT Y+APE+ D +S G L +++ G P
Sbjct: 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 1e-10
Identities = 71/297 (23%), Positives = 110/297 (37%), Gaps = 74/297 (24%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKA----- 740
+ +FD IGRG Y V L + A+K + E + E + ++
Sbjct: 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK---ELVNDDEDIDWVQTEKHVF 63
Query: 741 LTGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL--------------ARILSSETATE 785
H +V F + +R F V EY+ G L AR S+E
Sbjct: 64 EQASNHPFLVGLHSCFQTESRL-FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE---- 118
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLK 843
++ AL+Y+H I++RD+ NVLLD E H+ +D+G K
Sbjct: 119 ------------ISLALNYLHER---GIIYRDLKLDNVLLD--SEGHIKLTDYGMCKEGL 161
Query: 844 PDSSNWSELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899
S GT Y+APE+ Y V D ++ GVL E++ G+ P
Sbjct: 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSV----DWWALGVLMFEMMAGRSP------FD 211
Query: 900 DSSLPGANMNEAIDHMFDARLP-----PPWLEVGVEDKLKSIIEVALSCVDANPERR 951
D++F L P L V K S+++ L + +P+ R
Sbjct: 212 IVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV----KAASVLKSFL---NKDPKER 261
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 74/297 (24%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKA----- 740
+ +FD IGRG Y V L + A++ + E + E + ++
Sbjct: 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKK---ELVNDDEDIDWVQTEKHVF 106
Query: 741 LTGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL--------------ARILSSETATE 785
H +V F + +R F V EY+ G L AR S+E
Sbjct: 107 EQASNHPFLVGLHSCFQTESRL-FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE---- 161
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLK 843
++ AL+Y+H I++RD+ NVLLD E H+ +D+G K
Sbjct: 162 ------------ISLALNYLHER---GIIYRDLKLDNVLLD--SEGHIKLTDYGMCKEGL 204
Query: 844 PDSSNWSELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899
S GT Y+APE+ Y V D ++ GVL E++ G+ P
Sbjct: 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSV----DWWALGVLMFEMMAGRSP------FD 254
Query: 900 DSSLPGANMNEAIDHMFDARLP-----PPWLEVGVEDKLKSIIEVALSCVDANPERR 951
D++F L P L V K S+++ L + +P+ R
Sbjct: 255 IVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV----KAASVLKSFL---NKDPKER 304
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 2e-10
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKL 252
S+P+ I + L+L N + P F L +LT+L+L NNQL+ +P + L
Sbjct: 23 SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQ 79
Query: 253 LTDLSLSQNQLRGTVPS-SLSNLSSLEILHLYDN 285
LT LSL+ NQL+ ++P + NL SL + L +N
Sbjct: 80 LTQLSLNDNQLK-SIPRGAFDNLKSLTHIWLLNN 112
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 5e-06
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 219 IPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLE 278
IP++ L L +NQ++ P L LT L L NQL L+ L
Sbjct: 28 IPTT------TQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLT 81
Query: 279 ILHLYDNQLSGHIPQEIGNFMNLNSL 304
L L DNQL IP+ G F NL SL
Sbjct: 82 QLSLNDNQLKS-IPR--GAFDNLKSL 104
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 458 GIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG---KL 514
GIP T L L N+ +K PG L +L L++ +N+ +P G KL
Sbjct: 27 GIP------TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQL-TVLPA--GVFDKL 77
Query: 515 VQLSELDLSHNLLRGEIPPEIC-NLESLEKLNLSHNN 550
QL++L L+ N L+ IP NL+SL + L NN
Sbjct: 78 TQLTQLSLNDNQLKS-IPRGAFDNLKSLTHIWL-LNN 112
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Query: 103 PIGNLTKLKFLNLSSNHFSGKIPSEIGL---LTNLEVLHMFVNHLNGSIPEIG---HLSS 156
P G T + L L N + K+ G+ LT L L + N L +P G L+
Sbjct: 25 PTGIPTTTQVLYLYDNQIT-KLEP--GVFDRLTQLTRLDLDNNQLT-VLPA-GVFDKLTQ 79
Query: 157 LKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNN 189
L L+L+ N L IP NL SL ++L NN
Sbjct: 80 LTQLSLNDNQLKS-IPRGAFDNLKSLTHIWLLNN 112
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 2e-10
Identities = 72/300 (24%), Positives = 110/300 (36%), Gaps = 89/300 (29%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEF----------L 735
I +F +G+G +G V+ AE + A+K L +K+ +
Sbjct: 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKAL---------KKDVVLMDDDVECTM 65
Query: 736 SEIKAL-TGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL------ARILSSETAT--- 784
E + L H + F F + F V EYL G L AT
Sbjct: 66 VEKRVLSLAWEHPFLTHMFCTFQTKENL-FFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 124
Query: 785 -EMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKL 841
E + L ++H + IV+RD+ N+LLD + H+ +DFG K
Sbjct: 125 AE------------IILGLQFLHSK---GIVYRDLKLDNILLD--KDGHIKIADFGMCKE 167
Query: 842 -LKPDSSNWSELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLS 896
+ D+ + GT Y+APE+ Y V D +SFGVL E++ GQ P
Sbjct: 168 NMLGDAKTNT-FCGTPDYIAPEILLGQKYNHSV----DWWSFGVLLYEMLIGQSP----- 217
Query: 897 SLSDSSLPGANMNEAIDHMFDARLP-----PPWLEVGVEDKLKSIIEVALSCVDANPERR 951
G + E +F + P WLE + K ++ PE+R
Sbjct: 218 ------FHGQDEEE----LFHSIRMDNPFYPRWLEK----EAKDLLVKLF---VREPEKR 260
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 3e-10
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKL 252
S+P+ I ++ L+L N + P F +L L +L ++N+L+ +IP + L
Sbjct: 26 SVPAGI--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQ 82
Query: 253 LTDLSLSQNQLRGTVPS-SLSNLSSLEILHLYDN 285
LT L L+ N L+ ++P + NL SL ++LY+N
Sbjct: 83 LTQLDLNDNHLK-SIPRGAFDNLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 9e-06
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 219 IPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLE 278
IP+ +L L+NNQ++ P +L L L + N+L L+ L
Sbjct: 31 IPTD------KQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLT 84
Query: 279 ILHLYDNQLSGHIPQEIGNFMNLNSL 304
L L DN L IP+ G F NL SL
Sbjct: 85 QLDLNDNHLKS-IPR--GAFDNLKSL 107
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 458 GIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG---KL 514
GIP TD L L+ N+ +K PG +L+ L L +SN+ IP G KL
Sbjct: 30 GIP------TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKL-TAIPT--GVFDKL 80
Query: 515 VQLSELDLSHNLLRGEIPPEIC-NLESLEKLNLSHNN 550
QL++LDL+ N L+ IP NL+SL + L +NN
Sbjct: 81 TQLTQLDLNDNHLKS-IPRGAFDNLKSLTHIYL-YNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 103 PIGNLTKLKFLNLSSNHFSGKIPS-EIGL---LTNLEVLHMFVNHLNGSIPEIG---HLS 155
P G T + L L++N +I E G+ L NL+ L+ N L +IP G L+
Sbjct: 28 PAGIPTDKQRLWLNNN----QITKLEPGVFDHLVNLQQLYFNSNKLT-AIPT-GVFDKLT 81
Query: 156 SLKNLALDGNHLDGPIPVSI-GNLSSLVGLYLYNN 189
L L L+ NHL IP NL SL +YLYNN
Sbjct: 82 QLTQLDLNDNHLKS-IPRGAFDNLKSLTHIYLYNN 115
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 71/238 (29%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFY- 753
+G+G YG V+K+ + +G+ VAVKK+ +T + EI LT + H NIV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 754 -----GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH-------- 800
R +LV++Y+E L ++ + H
Sbjct: 77 VLRADND----RDVYLVFDYME-TDLHAVIRANILEP-------------VHKQYVVYQL 118
Query: 801 --ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY-- 856
+ Y+H ++HRD+ N+LL+ E V+DFG ++ + + +
Sbjct: 119 IKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 857 -------------GYV------APEL-----AYTMKVTEKCDVYSFG-VLALEVIKGQ 889
YV APE+ YT + D++S G +L E++ G+
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGI----DMWSLGCILG-EILCGK 228
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 5e-10
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 28/135 (20%)
Query: 153 HLSSLKNLALDGNHLD-GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLK 211
S +K L LD + + G + L L N L +SI NL L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGL-----TSIANLPKL------ 63
Query: 212 KNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG-TVPSS 270
KL KLELS+N++SG + LT L+LS N+++ +
Sbjct: 64 ---------------NKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEP 108
Query: 271 LSNLSSLEILHLYDN 285
L L +L+ L L++
Sbjct: 109 LKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-06
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 472 LDLSANRFSK-SIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGE 530
L L +R ++ + G +L +L+ + + I L KL +L +L+LS N + G
Sbjct: 22 LVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIAN-LPKLNKLKKLELSDNRVSGG 79
Query: 531 IPPEICNLESLEKLNLSHNNLSG-SIPTNFENMHGLLSIDISYNEL 575
+ +L LNLS N + S + + L S+D+ E+
Sbjct: 80 LEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 228 KLTKLELSNNQLS-GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQ 286
+ +L L N++ + G + + L LS L T ++L L+ L+ L L DN+
Sbjct: 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGL--TSIANLPKLNKLKKLELSDNR 75
Query: 287 LSGHIPQEIGNFMNLNSLSVGGNQFTGF 314
+SG + NL L++ GN+
Sbjct: 76 VSGGLEVLAEKCPNLTHLNLSGNKIKDL 103
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 5e-06
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 83 FSHLSYLDLNENQLY--GNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMF 140
F L +L L N+P L KLK L LS N SG + NL L++
Sbjct: 41 FEELEFLSTINVGLTSIANLP----KLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLS 96
Query: 141 VNHLN--GSIPEIGHLSSLKNLALDGN 165
N + +I + L +LK+L L
Sbjct: 97 GNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Query: 83 FSHLSYLDLNENQL-YGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFV 141
S + L L+ ++ G + +L+FL+ + + I + + L L+ L +
Sbjct: 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SI-ANLPKLNKLKKLELSD 73
Query: 142 NHLNGSIPEIG-HLSSLKNLALDGNHLDGPIPVS-IGNLSSLVGLYLYNN---SLPGSIP 196
N ++G + + +L +L L GN + + + L +L L L+N +L
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 197 SSIGNLSNLVYL 208
+ L L YL
Sbjct: 134 NVFKLLPQLTYL 145
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
Query: 106 NLTKLKFLNLSSNHFS-GKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDG 164
+ +K L L ++ + GK+ LE L L SI + L+ LK L L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SIANLPKLNKLKKLELSD 73
Query: 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKN 213
N + G + V +L L L N + S + L NL L L
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 2e-09
Identities = 61/297 (20%), Positives = 106/297 (35%), Gaps = 83/297 (27%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLH----SFTGETTHQKEFLSEIKAL 741
+ +F+ +G+G +G V +E + + AVK L + E + L
Sbjct: 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTM---VEKRVL 74
Query: 742 -TGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL--------------ARILSSETATE 785
+ + + F + R + V EY+ G L A ++E
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRL-YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE---- 129
Query: 786 MDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLK 843
+A L ++ + I++RD+ NV+LD E H+ +DFG K
Sbjct: 130 ------------IAIGLFFLQSK---GIIYRDLKLDNVMLD--SEGHIKIADFGMCKENI 172
Query: 844 PDSSNWSELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899
D GT Y+APE+ Y V D ++FGVL E++ GQ P
Sbjct: 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSV----DWWAFGVLLYEMLAGQAP-------- 220
Query: 900 DSSLPGANMNEAIDHMFDARLP-----PPWLEVGVEDKLKSIIEVALSCVDANPERR 951
G + +E +F + + P + K ++ +P +R
Sbjct: 221 ---FEGEDEDE----LFQSIMEHNVAYPKSMSKEAVAICKGLMT-------KHPGKR 263
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 9/145 (6%)
Query: 181 LVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240
V L+ + + +++ L +L L N++ I SS + L L L N +
Sbjct: 27 KVELHGMIPPIEK-MDATLSTLKACKHLALSTNNIEK-I-SSLSGMENLRILSLGRNLIK 83
Query: 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS--GHIPQEIGNF 298
I L +L +S NQ+ S + L +L +L++ +N+++ G I ++
Sbjct: 84 -KIENLDAVADTLEELWISYNQI--ASLSGIEKLVNLRVLYMSNNKITNWGEI-DKLAAL 139
Query: 299 MNLNSLSVGGNQFTGFLPQNICQSG 323
L L + GN +N S
Sbjct: 140 DKLEDLLLAGNPLYNDYKENNATSE 164
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 7/116 (6%)
Query: 437 LELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYL 496
+ + +L + + L L +L LS N K I ++ + L L
Sbjct: 20 VVATEAEKV-ELHGMIPPIEK-MDATLSTLKACKHLALSTNNIEK-I-SSLSGMENLRIL 75
Query: 497 NMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552
++ N +I L EL +S+N + + I L +L L +S+N ++
Sbjct: 76 SLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLSG-IEKLVNLRVLYMSNNKIT 128
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 16/149 (10%)
Query: 336 IGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCP 395
I + TL + + + L N I I NL++ L N ++ +
Sbjct: 37 IEKMDATLSTLKACKHLALSTNN-IEKI-SSLSGMENLRILSLGRNLIK-KIENLDAVAD 93
Query: 396 QLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLE-LANLTSLNDLILNGNQ 454
L L I+ N I + I L L S+N + ++ LA L L DL+L GN
Sbjct: 94 TLEELWISYNQIAS-LSG-IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151
Query: 455 LSGGIPPE----------LGLLTDLGYLD 473
L + L +L LD
Sbjct: 152 LYNDYKENNATSEYRIEVVKRLPNLKKLD 180
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 85 HLSYLDLNENQLYG------NIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
+ + + +L+G + + + L K L LS+N+ KI S + + NL +L
Sbjct: 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KI-SSLSGMENLRILS 76
Query: 139 MFVNHLNGSIPEIGHLS-SLKNLALDGN---HLDGPIPVSIGNLSSLVGLYLYNNSL--P 192
+ N + I + ++ +L+ L + N L G I L +L LY+ NN +
Sbjct: 77 LGRNLIK-KIENLDAVADTLEELWISYNQIASLSG-----IEKLVNLRVLYMSNNKITNW 130
Query: 193 GSIPSSIGNLSNLVYLFLKKN 213
G I + L L L L N
Sbjct: 131 GEI-DKLAALDKLEDLLLAGN 150
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 2e-09
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 30/138 (21%)
Query: 154 LSSLKNLALDGNHLD-GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKK 212
++++ L LD + G I +L L L N L S+ NL L
Sbjct: 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGL-----ISVSNLPKL------- 70
Query: 213 NHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR--GTVPSS 270
KL KLELS N++ G + L LT L+LS N+L+ T+
Sbjct: 71 --------------PKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTL-EP 115
Query: 271 LSNLSSLEILHLYDNQLS 288
L L L+ L L++ +++
Sbjct: 116 LKKLECLKSLDLFNCEVT 133
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-06
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 225 YLRKLTKLELSNNQLS-GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLY 283
+ +L L N + + G I L LSL L S+L L L+ L L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELS 79
Query: 284 DNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312
+N++ G + NL L++ GN+
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 3e-06
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMF 140
+ F +L +L L L S + L KLK L LS N G + L NL L++
Sbjct: 46 AEFVNLEFLSLINVGL--ISVSNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLS 103
Query: 141 VNHLN--GSIPEIGHLSSLKNLALDGN 165
N L ++ + L LK+L L
Sbjct: 104 GNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 6e-06
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 471 YLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGE 530
LD + K I G + L +L++ + + L KL +L +L+LS N + G
Sbjct: 30 VLDNCKSNDGK-IEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELSENRIFGG 86
Query: 531 IPPEICNLESLEKLNLSHNNLS 552
+ L +L LNLS N L
Sbjct: 87 LDMLAEKLPNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 8/117 (6%)
Query: 344 RNCTSLERVRLEKNQL-IGNISDDFGIYPNLKLFDLSYNKFYGELSS--NWWNCPQLGIL 400
R ++ + L+ + G I + NL+ L L S N P+L L
Sbjct: 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVG----LISVSNLPKLPKLKKL 76
Query: 401 KIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLE-LANLTSLNDLILNGNQLS 456
+++ N I GG+ L L+ S N L LE L L L L L +++
Sbjct: 77 ELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVT 133
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGS 147
LD ++ G I L+FL+L + + + + L L+ L + N + G
Sbjct: 30 VLDNCKSND-GKIEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELSENRIFGG 86
Query: 148 IPEIG-HLSSLKNLALDGNHLDGPIPVS-IGNLSSLVGLYLYNN---SLPGSIPSSIGNL 202
+ + L +L +L L GN L + + L L L L+N +L S L
Sbjct: 87 LDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLL 146
Query: 203 SNLVYL 208
L YL
Sbjct: 147 PQLTYL 152
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 7e-05
Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 106 NLTKLKFLNLSSNHFS-GKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDG 164
++ L L + + GKI NLE L + L S+ + L LK L L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SVSNLPKLPKLKKLELSE 80
Query: 165 NHLDGPIPVSIGNLSSLVGLYLYNNSL--PGSIPSSIGNLSNLVYLFLKKN 213
N + G + + L +L L L N L ++ + L L L L
Sbjct: 81 NRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTL-EPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Query: 399 ILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLE-LANLTSLNDLILNGNQLSG 457
+L +N G I L L + L+ + L L L L L+ N++ G
Sbjct: 30 VLDNCKSND-GKIEGLTAEFVNLEFLSLINVGLIS---VSNLPKLPKLKKLELSENRIFG 85
Query: 458 GIPPELGLLTDLGYLDLSANRFSK-SIPGNMGYLLKLHYLNMSSNEFSQEI---PIQLGK 513
G+ L +L +L+LS N+ S + L L L++ + E +
Sbjct: 86 GLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKL 145
Query: 514 LVQLSELD 521
L QL+ LD
Sbjct: 146 LPQLTYLD 153
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 3e-09
Identities = 35/254 (13%), Positives = 61/254 (24%), Gaps = 64/254 (25%)
Query: 685 IRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLH----------------SFTGET 728
IG G +G V++ VA+K + E
Sbjct: 16 CLPTEKLQRCEKIGEGVFGEVFQTIAD-HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEI 74
Query: 729 THQKEFLSEIKALTGVRHRNIVKFYGFC------------------------------SH 758
KE LS + R +
Sbjct: 75 IISKE-LSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFK 133
Query: 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDV 818
F+V E+ G L + +++ + +L+ R HRD+
Sbjct: 134 DDQLFIVLEFEFGGID---LEQMRTKLSSLATAKSILHQLTASLAVAEASLR--FEHRDL 188
Query: 819 SSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEK--CDVY 876
NVLL + K + G + YT+ E+ V+
Sbjct: 189 HWGNVLLKKTSLKKLHYTLNGKSSTI---------PSCGLQVSIIDYTLSRLERDGIVVF 239
Query: 877 SFGVLALEVIKGQH 890
+ ++ G
Sbjct: 240 CDVSMDEDLFTGDG 253
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 6e-09
Identities = 72/303 (23%), Positives = 116/303 (38%), Gaps = 95/303 (31%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEF----------L 735
I+NF+ +G+G +G V A + +GD AVK L +K+ +
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVL---------KKDVILQDDDVECTM 71
Query: 736 SEIKALTGV-RHRNIVK-FYGFCSHARHSFLVYEYLERGSL--------------ARILS 779
+E + L+ H + + F F + R F V E++ G L AR +
Sbjct: 72 TEKRILSLARNHPFLTQLFCCFQTPDRL-FFVMEFVNGGDLMFHIQKSRRFDEARARFYA 130
Query: 780 SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFG 837
+E + AL ++H + I++RD+ NVLLD +E H +DFG
Sbjct: 131 AE----------------IISALMFLHDK---GIIYRDLKLDNVLLD--HEGHCKLADFG 169
Query: 838 TAKLLKPDSSNWSELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHPKD 893
K + + GT Y+APE+ Y V D ++ GVL E++ G P
Sbjct: 170 MCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAV----DWWAMGVLLYEMLCGHAP-- 223
Query: 894 LLSSLSDSSLPGANMNEAIDHMFDARLP-----PPWLEVGVEDKLKSIIEVALSCVDANP 948
N ++ +F+A L P WL I++ + NP
Sbjct: 224 ---------FEAENEDD----LFEAILNDEVVYPTWLHEDA----TGILKSFM---TKNP 263
Query: 949 ERR 951
R
Sbjct: 264 TMR 266
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 8e-09
Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 74/279 (26%)
Query: 649 SQRRKKDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKA 708
+ D EQ ++ ++ + K+ I NF+ +G G YG V+
Sbjct: 21 TSADGGDGGEQLLTVKHELRTANLTGHAEKV-------GIENFELLKVLGTGAYGKVFLV 73
Query: 709 ELPSG-DTV---AVKKLHSFTGETTHQKEFL-----------SEIKALTGVRHRN-IVK- 751
SG DT A+K L +K + +E + L +R +V
Sbjct: 74 RKISGHDTGKLYAMKVL---------KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL 124
Query: 752 FYGFCSHARHSFLVYEYLERGSL------ARILSSETAT----EMDWSKRVNVIKGVAHA 801
Y F + + L+ +Y+ G L + E + A
Sbjct: 125 HYAFQTETK-LHLILDYINGGELFTHLSQRERFTEHEVQIYVGE------------IVLA 171
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKL-LKPDSSNWSELAGTYGY 858
L ++H I++RD+ +N+LLD HV +DFG +K + ++ + GT Y
Sbjct: 172 LEHLHKL---GIIYRDIKLENILLD--SNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 859 VAPEL------AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
+AP++ + V D +S GVL E++ G P
Sbjct: 227 MAPDIVRGGDSGHDKAV----DWWSLGVLMYELLTGASP 261
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 9e-09
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 70/239 (29%)
Query: 687 SINNFDESFCIGRGGYGSVYKAELPSGDTV-AVKKLHSFTGETTHQKEFLSE------IK 739
++F IG+G +G V A + + AVK L QK+ + + I
Sbjct: 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVL---------QKKAILKKKEEKHIM 86
Query: 740 A-----LTGVRHRNIVK-FYGFCSHARHSFLVYEYLERGSL--------------ARILS 779
+ L V+H +V + F + + + V +Y+ G L AR +
Sbjct: 87 SERNVLLKNVKHPFLVGLHFSFQTADK-LYFVLDYINGGELFYHLQRERCFLEPRARFYA 145
Query: 780 SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFG 837
+E +A AL Y+H IV+RD+ +N+LLD + H+ +DFG
Sbjct: 146 AE----------------IASALGYLHSL---NIVYRDLKPENILLD--SQGHIVLTDFG 184
Query: 838 TAKL-LKPDSSNWSELAGTYGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGQHP 891
K ++ +S+ + GT Y+APE+ Y V D + G + E++ G P
Sbjct: 185 LCKENIEHNSTTST-FCGTPEYLAPEVLHKQPYDRTV----DWWCLGAVLYEMLYGLPP 238
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 56.9 bits (136), Expect = 1e-08
Identities = 34/213 (15%), Positives = 69/213 (32%), Gaps = 30/213 (14%)
Query: 355 EKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPE 414
+ + + I ++ + + + F + S +L I
Sbjct: 123 DCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGT 182
Query: 415 IGNA------TQLHELDFSSNHLVGKVPLELA--NLTSLNDLILNGNQLSGGIPPELGLL 466
+ L L+ S L V ++ +L +L L+L G ++ +
Sbjct: 183 NNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242
Query: 467 TDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGK---LVQLSELDLS 523
L S +RF L +L + E + + L QL +D+S
Sbjct: 243 RPL----FSKDRFPN-----------LKWLGIVDAEEQNVVVEMFLESDILPQLETMDIS 287
Query: 524 HNLLRGEIPPEIC----NLESLEKLNLSHNNLS 552
+L E + ++ L+ +N+ +N LS
Sbjct: 288 AGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 50.3 bits (119), Expect = 2e-06
Identities = 28/198 (14%), Positives = 61/198 (30%), Gaps = 26/198 (13%)
Query: 114 NLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHL--DGPI 171
S + + + L L + + N SI + +LK+L + L
Sbjct: 154 QEISWIEQVDLSPVLDAMPLLNNLKIKGTN-NLSIGKKPR-PNLKSLEIISGGLPDSVVE 211
Query: 172 PVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTK 231
+ +L +L L LY + L K+ L
Sbjct: 212 DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPL----FSKDRFP-----------NLKW 256
Query: 232 LELSNNQLSGSIPQEIGN---LKLLTDLSLSQNQLRGT----VPSSLSNLSSLEILHLYD 284
L + + + + + L L + +S L + + + L+ +++
Sbjct: 257 LGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKY 316
Query: 285 NQLSGHIPQEIGNFMNLN 302
N LS + +E+ + +
Sbjct: 317 NYLSDEMKKELQKSLPMK 334
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 7e-04
Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 25/183 (13%)
Query: 361 GNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNA-- 418
++S P L + LS P L L+I + + +I +
Sbjct: 162 VDLSPVLDAMPLLNNLKIKGT---NNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDL 218
Query: 419 TQLHELDF---SSNHLVGKVPLELA------NLTSLNDLILNGNQLSGGIPPELG---LL 466
L +L ++ +L L + + + +L
Sbjct: 219 PNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDIL 278
Query: 467 TDLGYLDLSANRFS----KSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGK----LVQLS 518
L +D+SA + + + ++ + L ++NM N S E+ +L K + +S
Sbjct: 279 PQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVS 338
Query: 519 ELD 521
+
Sbjct: 339 DSQ 341
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-08
Identities = 46/227 (20%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR---------- 745
+G G + +V+ A+ + + VA+K + + + + EIK L V
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSM 83
Query: 746 -HRNIVKFYGFCSH----ARHSFLVYEYLERGSLARILSSETATEMDWSKR-------VN 793
+I+K +H H +V+E L +L K+ +
Sbjct: 84 GANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLL-----------ALIKKYEHRGIPLI 131
Query: 794 VIKGVAH----ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH------VSDFGTAKLLK 843
+K ++ L YMH C I+H D+ +NVL++ ++D G A
Sbjct: 132 YVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW-- 187
Query: 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQH 890
+++ T Y +PE+ D++S L E+I G
Sbjct: 188 -YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 4e-08
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Query: 177 NLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSN 236
N L L +P I + L + N +R + F LR+L L ++N
Sbjct: 17 NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLLVNN 73
Query: 237 NQLSGSIPQEIGNLKLLTDLSLSQNQLR--GTVPSSLSNLSSLEILHLYDN 285
N++ L LT+L L+ N L G + L++L SL L + N
Sbjct: 74 NRICRIGEGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-06
Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 6/118 (5%)
Query: 197 SSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDL 256
+ N L L+ + I + L + ++ S+N++ + L+ L L
Sbjct: 13 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLDG-FPLLRRLKTL 69
Query: 257 SLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS--GHIPQEIGNFMNLNSLSVGGNQFT 312
++ N++ L L L L +N L G + + + +L L + N T
Sbjct: 70 LVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLTYLCILRNPVT 126
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 5/93 (5%)
Query: 461 PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQ-LGKLVQLSE 519
+ LDL + I L + ++ S NE + + L +L
Sbjct: 13 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK---LDGFPLLRRLKT 68
Query: 520 LDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552
L +++N + L L +L L++N+L
Sbjct: 69 LLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 6/123 (4%)
Query: 386 ELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLE-LANLTS 444
E ++ + N + L + G I I Q +DFS N + L+ L
Sbjct: 10 EQAAQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR---KLDGFPLLRR 65
Query: 445 LNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSK-SIPGNMGYLLKLHYLNMSSNEF 503
L L++N N++ L DL L L+ N + + L L YL + N
Sbjct: 66 LKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPV 125
Query: 504 SQE 506
+ +
Sbjct: 126 TNK 128
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 7e-06
Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 7/127 (5%)
Query: 89 LDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSI 148
+ L + N + + L+L I + L + + N + +
Sbjct: 2 VKLTAELI-EQAAQ-YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KL 57
Query: 149 PEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSL--PGSIPSSIGNLSNLV 206
L LK L ++ N + L L L L NNSL G + + +L +L
Sbjct: 58 DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDL-DPLASLKSLT 116
Query: 207 YLFLKKN 213
YL + +N
Sbjct: 117 YLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 81 SLFSHLSYLDLNENQLY--GNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
+ +D ++N++ P L +LK L +++N L +L L
Sbjct: 39 ATLDQFDAIDFSDNEIRKLDGFP----LLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94
Query: 139 MFVNHLN--GSIPEIGHLSSLKNLALDGN 165
+ N L G + + L SL L + N
Sbjct: 95 LTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 74/527 (14%), Positives = 160/527 (30%), Gaps = 80/527 (15%)
Query: 60 RIISINLTSTSLKGTLDQFPFSL---FSHLSYLDLNENQ---LYGNIPSPIGNLTKLKFL 113
+I S ++ P L F +L L L ++ IP G
Sbjct: 46 KIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVT 105
Query: 114 NLSSNHFSGKIPSEIGLLTNLEVLHM-FVNHLNGSIPEI--GHLSSLKNLALDGNHL--D 168
+S+N L L+ +H + + + + L+ L LD
Sbjct: 106 EISNN------------LRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTT 153
Query: 169 GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIG----NLSNLVYLFLKKNHLRGPIPSSFG 224
+ + + + L + +S + + ++L L P
Sbjct: 154 DGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLE 213
Query: 225 YL----RKLTKLELSNNQLS--GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLE 278
+ R L +++ + ++ + NL+ SL+++ +L L
Sbjct: 214 TIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLC 273
Query: 279 ILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQF-TGFLPQNICQSGSLQYFSVHDNYFIG 337
L L + +P + L + T I + +L+ +
Sbjct: 274 RLGLSYMGPNE-MPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDR 332
Query: 338 SLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQL 397
L + C L+R+R+E+ + D+ G+ L L+ C +L
Sbjct: 333 GLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQ------------GCQEL 380
Query: 398 GILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSG 457
+ + ++IT + S + L NL ++L+ +
Sbjct: 381 EYMAVYVSDIT----------------NESLESIGTY----LKNLCDFRLVLLDREERIT 420
Query: 458 GIPPELGL------LTDLGYLDLSANRFSKSIPGNMGYLLK----LHYLNMSSNEFSQEI 507
+P + G+ L + + G + Y+ + + ++ + S E
Sbjct: 421 DLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG-LSYIGQYSPNVRWMLLGYVGESDEG 479
Query: 508 PIQLGK-LVQLSELDLSH-NLLRGEIPPEICNLESLEKLNLSHNNLS 552
++ + L +L++ I + L SL L + S
Sbjct: 480 LMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 5e-07
Identities = 42/254 (16%), Positives = 81/254 (31%), Gaps = 65/254 (25%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV-KFYG 754
+G G + +V+ + + VA+K + + + L EI+ L VR+ +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVV---KSAEHYTETALDEIRLLKSVRNSDPNDPNRE 101
Query: 755 FCSHARHSF-----------LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALS 803
F +V+E L L + + + +I+ V L
Sbjct: 102 MVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLD 160
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFE----------------------------------- 828
Y+H +CR I+H D+ +N+LL
Sbjct: 161 YLHTKCR--IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAG 218
Query: 829 ------YEAHVSDFGTAKLLKPDSSNW-----SELAGTYGYVAPELAYTMKVTEKCDVYS 877
E ++ K+ ++ W +E T Y + E+ D++S
Sbjct: 219 NFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWS 278
Query: 878 FGVLALEVIKGQHP 891
+A E+ G +
Sbjct: 279 TACMAFELATGDYL 292
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 9e-07
Identities = 65/372 (17%), Positives = 107/372 (28%), Gaps = 86/372 (23%)
Query: 227 RKLTKLELSNNQLSGSIPQEIG-----NLKLLTDLSLSQNQLRGTVPSSL-----SNLSS 276
+T L+LS N L E+ +T L+LS N L L + ++
Sbjct: 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81
Query: 277 LEILHLYDNQLSGHIPQEIGNFM-----NLNSLSVGGNQFTGFLPQNICQSGSLQYFSVH 331
+ L+L N LS E+ + + L +G N F+ Q+
Sbjct: 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQA--------- 132
Query: 332 DNYFIGSLPKTLRNC-TSLERVRLEKNQL----IGNISDDFGIYP-NLKLFDLSYNKFYG 385
N S+ + L N L + P N+ +L N
Sbjct: 133 -----------FSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181
Query: 386 ELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELA----- 440
+ NC +L +A + LD S+N L K ELA
Sbjct: 182 K------NCAELAKF-LASIP------------ASVTSLDLSANLLGLKSYAELAYIFSS 222
Query: 441 NLTSLNDLILNGNQLSGGIPPELGLL----TDLGYLDLSANRFSKSIPGNMGYLLK---- 492
+ L L N L G L LL L + L + L
Sbjct: 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPN 282
Query: 493 ---LHYLNMSSNEFSQEIPIQLGKLVQ-----LSELDLSHNLL-----RGEIPPEICNLE 539
+ ++ + E I + L++ L + L ++ +
Sbjct: 283 IQKIILVDKNGKEIHPSHSIPISNLIRELSGKADVPSLLNQCLIFAQKHQTNIEDLNIPD 342
Query: 540 SLEKLNLSHNNL 551
L + + L
Sbjct: 343 ELRESIQTCKPL 354
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 53/311 (17%), Positives = 89/311 (28%), Gaps = 71/311 (22%)
Query: 84 SHLSYLDLNENQLYGNIPSPIG-----NLTKLKFLNLSSNHFSGKIPSEIGLL-----TN 133
++ LDL+ N LY + + LNLS N K E+ + N
Sbjct: 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81
Query: 134 LEVLHMFVNHL-NGSIPEIGHL-----SSLKNLALDGNHLDGPIPVSIGNL-----SSLV 182
+ L++ N L S E+ ++ L L N +S+
Sbjct: 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASIT 141
Query: 183 GLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242
L L N L S L + L + L L N L+
Sbjct: 142 SLNLRGNDLG---IKSSDELIQI----LAAIP------------ANVNSLNLRGNNLASK 182
Query: 243 IPQEIGNL-----KLLTDLSLSQNQLRGTVPSSL-----SNLSSLEILHLYDNQLSGHIP 292
E+ +T L LS N L + L S + + L+L N L G
Sbjct: 183 NCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242
Query: 293 QEIGNFM----NLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTS 348
+ + +L ++ + + + Q +L N
Sbjct: 243 ENLKLLKDSLKHLQTVYLDYDI--------VKNMSKEQ---------CKALGAAFPNIQK 285
Query: 349 LERVRLEKNQL 359
+ V ++
Sbjct: 286 IILVDKNGKEI 296
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 44/287 (15%), Positives = 92/287 (32%), Gaps = 60/287 (20%)
Query: 343 LRNCTSLERVRLEKNQLIGNISDDFGIY---------PNLKLFDLSYNKFYGE------- 386
+ + L N N+ + ++ +LS N +
Sbjct: 18 TSIPHGVTSLDLSLN----NLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQ 73
Query: 387 -LSSNWWNCPQLGILKIAGNNITGGIPPEIGNA-----TQLHELDFSSNHLVGKVPLELA 440
L++ + L ++GN ++ E+ + LD N K E
Sbjct: 74 ILAAI---PANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFK 130
Query: 441 NL-----TSLNDLILNGNQLSGGIPPELGLL-----TDLGYLDLSANRFSKSIPGNMGYL 490
S+ L L GN L EL + ++ L+L N + +
Sbjct: 131 QAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKF 190
Query: 491 LK-----LHYLNMSSNEFSQEIPIQLGKLVQ-----LSELDLSHNLLRGEIPPEICNLE- 539
L + L++S+N + +L + + L+L N L G + L+
Sbjct: 191 LASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKD 250
Query: 540 ---SLEKLNLSHNNLSG-------SIPTNFENMHGLLSIDISYNELD 576
L+ + L ++ + ++ F N+ ++ +D + E+
Sbjct: 251 SLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 55/389 (14%), Positives = 107/389 (27%), Gaps = 93/389 (23%)
Query: 106 NLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGN 165
+ L+LS N+ E+ + +S+ +L L GN
Sbjct: 20 IPHGVTSLDLSLNNLYSISTVELI-----QAFA-------------NTPASVTSLNLSGN 61
Query: 166 HLDGPIPVSIG-----NLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIP 220
L + +++ L L N L + L
Sbjct: 62 SLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK-------TLAAIP------ 108
Query: 221 SSFGYLRKLTKLELSNNQLSGSIPQEIGNL-----KLLTDLSLSQNQLRGTVPSSLSNL- 274
+T L+L N S E +T L+L N L L +
Sbjct: 109 ------FTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162
Query: 275 ----SSLEILHLYDNQLSGHIPQEIGNFM-----NLNSLSVGGNQFTGFLPQNICQ---- 321
+++ L+L N L+ E+ F+ ++ SL + N +
Sbjct: 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222
Query: 322 -SGSLQYFSVHDNYF----IGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLF 376
+ ++ N + +L + L+ V L+ + + N+S +
Sbjct: 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDI-VKNMSKEQCK------- 274
Query: 377 DLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVP 436
L + + N ++ ++ G I I N + L+ +
Sbjct: 275 ---------ALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELSGKADVPSLLNQCL 325
Query: 437 LE----------LANLTSLNDLILNGNQL 455
+ L L + I L
Sbjct: 326 IFAQKHQTNIEDLNIPDELRESIQTCKPL 354
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 4e-06
Identities = 76/580 (13%), Positives = 158/580 (27%), Gaps = 103/580 (17%)
Query: 50 WSGISCNHAGRIISINLTSTSLKGTLDQFP------FSLFSHLSYLDLNENQLYGNIPSP 103
W I ++ N + S + +FP H + +L + G P
Sbjct: 37 WYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGW-GGYVYP 95
Query: 104 IGNLTKLKFLNLSSNHFSGKIPSEIGL------LTNLEVLHM-FVNHL-NGSIPEIG-HL 154
+ L + ++ L N +VL + + I
Sbjct: 96 WIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATC 155
Query: 155 SSLKNLALDGNHLDGPIPVSIGNLS----SLVGLYLYNNSLP---GSIPSSIGNLSNLVY 207
+LK L L + +D + + SLV L + + ++ + NL
Sbjct: 156 RNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKS 215
Query: 208 LFLKKNHLRGPIPSSFGYLRKLTKLELS------NNQLSGSIPQEIGNLKLLTDLSLSQN 261
L L + + + +L +L + + + K L LS +
Sbjct: 216 LKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWD 275
Query: 262 QLRGTVPSSLSNLSSLEILHLYDNQLSG----------------HIPQEIG--------- 296
+ +P+ S S L L+L + + I
Sbjct: 276 AVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLAS 335
Query: 297 NFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVH---------DNYFIG--SLPKTLRN 345
+L L V ++ P L S+ + +L RN
Sbjct: 336 TCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARN 395
Query: 346 CTSLERVRLEKNQLIGNISD-----DFGIY------PNLKLFDLSYNKFYGELSSNWWNC 394
++ R RL + D G +L+ LS
Sbjct: 396 RPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYA 455
Query: 395 PQLGILKIAGNNITG-GIPPEIGNATQLHELDFSSNHLVGKVPLELA-NLTSLNDLILNG 452
++ +L +A + G+ + L +L+ K L A L ++ L ++
Sbjct: 456 KKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSS 515
Query: 453 NQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512
++ L L + ++ S+ +
Sbjct: 516 CS-----------VSFGACKLLGQKMPK----------LNVEVIDERGAPDSRPESCPVE 554
Query: 513 KLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552
++ + R ++P + N++ + S ++
Sbjct: 555 RVFIYRTVAGP----RFDMPGFVWNMDQDSTMRFSRQIIT 590
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 2e-05
Identities = 42/262 (16%), Positives = 85/262 (32%), Gaps = 23/262 (8%)
Query: 333 NYFIGSLPKTLRNCTSLERVRLEKNQL----IGNISDDFGIYPNLKLFDLSYNKFYGE-- 386
Y + + T LE +RL++ + + I+ F N K+ LS + +
Sbjct: 91 GYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSF---KNFKVLVLSSCEGFSTDG 147
Query: 387 LSSNWWNCPQLGILKIAGNNITG----GIPPEIGNATQLHELDFSSNH-LVGKVPLE--L 439
L++ C L L + +++ + T L L+ S V LE +
Sbjct: 148 LAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLV 207
Query: 440 ANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSA------NRFSKSIPGNMGYLLKL 493
+L L LN + L L L + + +L
Sbjct: 208 TRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKEL 267
Query: 494 HYLNMSSNEFSQEIPIQLGKLVQLSELDLSH-NLLRGEIPPEICNLESLEKLNLSHNNLS 552
L+ + +P +L+ L+LS+ + ++ +C L++L +
Sbjct: 268 RCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIED 327
Query: 553 GSIPTNFENMHGLLSIDISYNE 574
+ L + + +E
Sbjct: 328 AGLEVLASTCKDLRELRVFPSE 349
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 5e-06
Identities = 34/180 (18%), Positives = 68/180 (37%), Gaps = 40/180 (22%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIK---------------AL 741
IG+GG+G +Y A++ S ++V E + +E+K
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 742 TGVRHRNIVKFYGFCSH----ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG 797
+++ + K++G H + F++ + L +I + + + K
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGS-DLQKIY--------EANAKRFSRKT 153
Query: 798 VA-------HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSN 848
V L Y+H VH D+ + N+LL+++ V D+G A P+ +
Sbjct: 154 VLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH 210
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 9e-06
Identities = 36/171 (21%), Positives = 62/171 (36%), Gaps = 38/171 (22%)
Query: 697 IGRGGYGSVYKAE---------LPSGDTVAVK------KLHSFTG--ETTHQKEFLSEIK 739
R G +Y+A P ++K +L + + + +++ K
Sbjct: 50 QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWK 109
Query: 740 ALTGVRHRNIVKFYGFCSH-ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGV 798
L I GF H ++ FLV L R SL L K V + V
Sbjct: 110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGR-SLQSALDVS-------PKHVLSERSV 161
Query: 799 A-------HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAK 840
AL ++H VH +V+++N+ +D E ++ V + +G A
Sbjct: 162 LQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFAF 209
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 28/156 (17%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEI-KALTGVRHRNIVKFYG 754
IG G +G +Y + +G+ VA+K T E S+I K + G I
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIE--SKIYKMMQGGVG--IPTIRW 72
Query: 755 FCSHARHSFLVYEYLERGSLA-------RILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
+ ++ +V E L SL R S +T + + + + Y+H
Sbjct: 73 CGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTV--------LLLADQMISRIEYIHS 123
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAH---VSDFGTAK 840
+ +HRDV N L+ + + + DFG AK
Sbjct: 124 KN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 2e-05
Identities = 50/252 (19%), Positives = 93/252 (36%), Gaps = 62/252 (24%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR------NI 749
IG+G +G V KA VA+K + + E ++ EI+ L +R + N+
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 750 VKFYGFCSHARHSFLV--------YEYLERGSLARILSSETATEMDWSKRVNVIKGVAH- 800
+ + H + YE +++ + +++ AH
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF-------------SLPLVRKFAHS 208
Query: 801 ---ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH--VSDFGTAKLLKPDSSNWSELAGT 855
L +H + R I+H D+ +N+LL + + V DFG++ + T
Sbjct: 209 ILQCLDALH-KNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYE-------HQRVYT 258
Query: 856 Y----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911
Y Y APE+ + D++S G + E++ G LPG + +
Sbjct: 259 YIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY-----------PLLPGEDEGDQ 307
Query: 912 IDHMFDARLPPP 923
+ M + P
Sbjct: 308 LACMIELLGMPS 319
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 28/157 (17%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G +G +++ L + VA+K + + E+ K L G I Y F
Sbjct: 18 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEY-RTYKLLAGCTG--IPNVYYF 74
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVA-------HALSYMHHE 808
H+ LV + L SL +L D R +K VA + +H +
Sbjct: 75 GQEGLHNVLVIDLLGP-SLEDLL--------DLCGRKFSVKTVAMAAKQMLARVQSIHEK 125
Query: 809 CRPPIVHRDVSSKNVLLDFEYEA-----HVSDFGTAK 840
+V+RD+ N L+ +V DFG K
Sbjct: 126 S---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 49/251 (19%), Positives = 91/251 (36%), Gaps = 58/251 (23%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR------NI 749
IG+G +G V KA + VA+K + + + + E++ L + I
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDTEMKYYI 118
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKR-------VNVIKGVAH-- 800
V H LV+E L +L +L + +N+ + A
Sbjct: 119 VHLKRHFMFRNHLCLVFEMLSY-NLYDLL-----------RNTNFRGVSLNLTRKFAQQM 166
Query: 801 --ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAH--VSDFGTAKLLKPDSSNWSELAGTY 856
AL ++ I+H D+ +N+LL + + DFG++ + Y
Sbjct: 167 CTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS-------CQLGQRIYQY 218
Query: 857 ----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912
Y +PE+ M D++S G + +E+ G+ GAN + +
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE-----------PLFSGANEVDQM 267
Query: 913 DHMFDARLPPP 923
+ + + PP
Sbjct: 268 NKIVEVLGIPP 278
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 38/162 (23%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEI-KALTGVRHRNIVKFYG 754
IG G +G + + L + + VA+K + Q K L I + Y
Sbjct: 17 IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA--PQLHLEYRFYKQLGSGDG--IPQVYY 72
Query: 755 FCSHARHSFLVYEYLERGSLA-------RILSSET----ATEMDWSKRVNVIKGVAHALS 803
F +++ +V E L SL R S +T A ++ +
Sbjct: 73 FGPCGKYNAMVLELLGP-SLEDLFDLCDRTFSLKTVLMIAIQL------------ISRME 119
Query: 804 YMHHECRPPIVHRDVSSKNVLL-----DFEYEAHVSDFGTAK 840
Y+H + +++RDV +N L+ + H+ DF AK
Sbjct: 120 YVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 4e-05
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 28/156 (17%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEI-KALTGVRHRNIVKFYG 754
IG G +G +Y + + + VA+K + T E S+I + L G I
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYE--SKIYRILQGGTG--IPNVRW 70
Query: 755 FCSHARHSFLVYEYLERGSLA-------RILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
F ++ LV + L SL R LS +T + + + + + ++H
Sbjct: 71 FGVEGDYNVLVMDLLGP-SLEDLFNFCSRKLSLKTV--------LMLADQMINRVEFVHS 121
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAH---VSDFGTAK 840
+ +HRD+ N L+ A+ + DFG AK
Sbjct: 122 KS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 8e-05
Identities = 35/181 (19%), Positives = 60/181 (33%), Gaps = 45/181 (24%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIK---------------A 740
IG GG+G +Y A + A + E SE+K
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKV---EYQENGPLFSELKFYQRVAKKDCIKKWIE 101
Query: 741 LTGVRHRNIVKFYGFCSHA----RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIK 796
+ + I FYG + F+V E L L +I +
Sbjct: 102 RKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGI-DLQKIS--------GQNGTFK-KS 151
Query: 797 GVA-------HALSYMHHECRPPIVHRDVSSKNVLLDFEYE--AHVSDFGTAKLLKPDSS 847
V L Y+H VH D+ + N+LL ++ +++D+G + P+ +
Sbjct: 152 TVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGN 208
Query: 848 N 848
+
Sbjct: 209 H 209
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 5e-04
Identities = 38/240 (15%), Positives = 76/240 (31%), Gaps = 28/240 (11%)
Query: 227 RKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQ 286
+ + + + + + ++ + T+ LS S L+ L L +
Sbjct: 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLR 129
Query: 287 LSGHIPQEIGNFMNLNSLSVGG-NQFTGFLPQNICQS-GSLQYFSVHDNYFI---GSLPK 341
LS I + NL L++ G + F+ F Q + S L ++ +
Sbjct: 130 LSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189
Query: 342 TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILK 401
++ ++ L + N+ LS+ CP L L
Sbjct: 190 VAHVSETITQLNL--SGYRKNLQKSD-------------------LSTLVRRCPNLVHLD 228
Query: 402 IAG-NNITGGIPPEIGNATQLHELDFSSNHLVG-KVPLELANLTSLNDLILNGNQLSGGI 459
++ + E L L S + + + LEL + +L L + G G +
Sbjct: 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTL 288
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 964 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 100.0 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 100.0 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.97 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.96 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.96 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.95 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.95 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.95 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.95 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.94 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.94 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.94 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.94 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.94 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.94 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.93 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.92 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.92 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.91 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.91 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.91 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.9 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.9 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.9 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.89 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.89 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.89 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.89 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.89 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.88 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.88 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.88 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.88 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.88 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.88 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.87 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.86 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.85 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.85 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.85 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.83 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.83 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.83 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.82 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.82 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.81 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.81 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.8 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.8 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.8 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.79 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.79 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.79 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.78 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.77 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.77 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.75 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.75 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.75 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.74 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.73 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.72 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.72 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.72 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.71 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.66 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.66 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.65 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.65 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.65 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.63 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.63 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.62 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.62 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.62 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.59 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.57 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.57 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.55 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.55 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.54 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.54 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.48 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.45 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.42 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.41 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.34 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.33 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.33 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.32 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.23 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.21 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.19 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.08 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.04 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.01 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.93 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.92 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.87 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.79 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.77 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.6 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.52 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.49 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.44 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.26 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.26 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.21 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.07 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.9 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.87 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.77 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.65 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.62 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.62 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.53 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.5 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.34 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.34 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.0 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.98 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.85 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.83 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.76 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.65 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.57 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.5 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.26 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 95.98 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 95.57 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 95.45 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 95.08 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 94.81 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 89.5 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 83.69 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 82.09 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-84 Score=794.52 Aligned_cols=598 Identities=33% Similarity=0.545 Sum_probs=489.5
Q ss_pred CccccCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeceEeCCCCCeeEEecCCCCCCCc---cCC
Q 037111 1 FSLNVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGT---LDQ 77 (964)
Q Consensus 1 ~~~~~~~~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~---l~~ 77 (964)
|.+..+.+..+|++|||+||+++. ||. .++||.. .+|||.|.||+|+ .+||++++|++.++.|. +++
T Consensus 2 ~~~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~-------~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~ 71 (768)
T 3rgz_A 2 FQASPSQSLYREIHQLISFKDVLP-DKN-LLPDWSS-------NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSS 71 (768)
T ss_dssp ------CCHHHHHHHHHHHHTTCS-CTT-SSTTCCT-------TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHH
T ss_pred CcCccccCCHHHHHHHHHHHhhCC-Ccc-cccCCCC-------CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccCh
Confidence 344445555569999999999998 566 8999973 3689999999999 79999999999999886 332
Q ss_pred ----------------------CccCcCcceeEEeccCCccccCCCc--cccCCCCcCeeecccCCccCcCCccc-CCCC
Q 037111 78 ----------------------FPFSLFSHLSYLDLNENQLYGNIPS--PIGNLTKLKFLNLSSNHFSGKIPSEI-GLLT 132 (964)
Q Consensus 78 ----------------------~~~~~~~~L~~L~l~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~ 132 (964)
..++.+++|++|||++|.++|.+|. .|+++++|++|+|++|.+++.+|..+ +.++
T Consensus 72 ~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~ 151 (768)
T 3rgz_A 72 SLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLN 151 (768)
T ss_dssp HTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCT
T ss_pred hHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCC
Confidence 2466788999999999999998888 89999999999999999988888765 5666
Q ss_pred cccEEEccccccCCcccc--------------------------cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEE
Q 037111 133 NLEVLHMFVNHLNGSIPE--------------------------IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYL 186 (964)
Q Consensus 133 ~L~~L~l~~n~l~~~~~~--------------------------~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 186 (964)
+|++|+|++|++++.+|. ++.+++|++|+|++|++++.+|. ++++++|++|+|
T Consensus 152 ~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 152 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp TCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred CCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 666666666655543321 24567777777777777776666 777777777777
Q ss_pred ecCCCCCCCCccccCCCCcchhhcccccccC----------------------CccccccCc-cccceeeccccccCCCC
Q 037111 187 YNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG----------------------PIPSSFGYL-RKLTKLELSNNQLSGSI 243 (964)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~----------------------~~~~~~~~l-~~L~~L~L~~N~l~~~~ 243 (964)
++|++++.+|..++++++|++|+|++|++++ .+|..+... ++|++|+|++|++++.+
T Consensus 231 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~ 310 (768)
T 3rgz_A 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV 310 (768)
T ss_dssp CSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECC
T ss_pred cCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCcc
Confidence 7777777777777777766666666666654 444444443 66666666666666666
Q ss_pred hhhhhcccccceeeccccccccccCCc-ccCccccceeecccccccccCCcccccCc-cccEEEeeCccCcccCCccccc
Q 037111 244 PQEIGNLKLLTDLSLSQNQLRGTVPSS-LSNLSSLEILHLYDNQLSGHIPQEIGNFM-NLNSLSVGGNQFTGFLPQNICQ 321 (964)
Q Consensus 244 p~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~ 321 (964)
|..|+.+++|++|+|++|+++|.+|.. +..+++|++|++++|++++.+|..+..++ +|+.|++++|++++..|..++.
T Consensus 311 p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~ 390 (768)
T 3rgz_A 311 PPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQ 390 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTC
T ss_pred chHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhh
Confidence 666666666666666666666666644 66666666777766666666666666665 6777777777777666666665
Q ss_pred --CCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccce
Q 037111 322 --SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGI 399 (964)
Q Consensus 322 --~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~ 399 (964)
+++|++|++++|.+.+.+|..+.++++|+.|++++|.+++..+..|..+++|+.|++++|++.+..+..+..+++|+.
T Consensus 391 ~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 470 (768)
T 3rgz_A 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470 (768)
T ss_dssp STTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred cccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceE
Confidence 677888888888888888889999999999999999999988899999999999999999999988989999999999
Q ss_pred EeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCcc
Q 037111 400 LKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRF 479 (964)
Q Consensus 400 L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 479 (964)
|++++|.+++.+|..+.++++|++|+|++|++++.+|.+++.+++|++|+|++|++++.+|..++.+++|++|+|++|++
T Consensus 471 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCC----------------------------------------------------------------------ccc
Q 037111 480 SKSIPGN----------------------------------------------------------------------MGY 489 (964)
Q Consensus 480 ~~~~~~~----------------------------------------------------------------------~~~ 489 (964)
++.+|.. +..
T Consensus 551 ~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~ 630 (768)
T 3rgz_A 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630 (768)
T ss_dssp ESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSS
T ss_pred CCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhc
Confidence 8766643 344
Q ss_pred ccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEE
Q 037111 490 LLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSID 569 (964)
Q Consensus 490 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ 569 (964)
+++|++|||++|++++.+|..++.+++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..|.++++|+.||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccccCCCCccCCCCCcccccCCCCccCCCCCCccccc
Q 037111 570 ISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPCKA 611 (964)
Q Consensus 570 ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~l~~~~~ 611 (964)
+|+|+++|.||...+|.+++..+|.|||++||.+. .+|..
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l--~~C~~ 750 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL--PRCDP 750 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS--CCCCS
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCC--cCCCC
Confidence 99999999999999999999999999999999864 37753
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-64 Score=619.19 Aligned_cols=510 Identities=32% Similarity=0.442 Sum_probs=408.8
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc--ccCCCCcccEEEccccccCCcccc-c-CCCCCCCE
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS--EIGLLTNLEVLHMFVNHLNGSIPE-I-GHLSSLKN 159 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~--~~~~l~~L~~L~l~~n~l~~~~~~-~-~~l~~L~~ 159 (964)
++|+.++++.|.+. .+|+.|+++++|++|+|++|.++|.+|. .++.+++|++|+|++|.+++.+|. + ..+++|++
T Consensus 77 ~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 77 TGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp TTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred CcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 34444444444443 2558999999999999999999999999 999999999999999999988875 3 78999999
Q ss_pred EEcCCCCCCCCCCCC-------------------------CCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhccccc
Q 037111 160 LALDGNHLDGPIPVS-------------------------IGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNH 214 (964)
Q Consensus 160 L~L~~n~l~~~~p~~-------------------------~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 214 (964)
|+|++|++++..|.. ++++++|++|+|++|++++.+|. ++++++|++|+|++|.
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNK 234 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSC
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCc
Confidence 999999998765543 25788899999999999988887 9999999999999999
Q ss_pred ccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCc-cccceeecccccccccCCc
Q 037111 215 LRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNL-SSLEILHLYDNQLSGHIPQ 293 (964)
Q Consensus 215 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~ 293 (964)
+++.+|..|+.+++|++|+|++|++++.+|.. .+++|++|+|++|++++.+|..+... ++|++|+|++|++++.+|.
T Consensus 235 l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~ 312 (768)
T 3rgz_A 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312 (768)
T ss_dssp CCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCG
T ss_pred CCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccch
Confidence 99999999999999999999999887665543 55566666666666655555555443 5555555555555555555
Q ss_pred ccccCccccEEEeeCccCcccCCcc-cccCCcceEEEeecccc-------------------------cccccccccC--
Q 037111 294 EIGNFMNLNSLSVGGNQFTGFLPQN-ICQSGSLQYFSVHDNYF-------------------------IGSLPKTLRN-- 345 (964)
Q Consensus 294 ~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~L~~L~l~~n~l-------------------------~~~~p~~l~~-- 345 (964)
.|+.+++|+.|++++|++++.+|.. +..+++|++|++++|.+ .+.+|..+..
T Consensus 313 ~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~ 392 (768)
T 3rgz_A 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP 392 (768)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCST
T ss_pred HHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcc
Confidence 5555555555555555555444433 44445555555555544 4444444444
Q ss_pred CCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEe
Q 037111 346 CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELD 425 (964)
Q Consensus 346 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 425 (964)
+++|+.|++++|.+++..+..+..+++|+.|+|++|++++..+..+..+++|+.|++++|.+++.+|..+..+++|++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE
Confidence 55677777777777777778888888899999999999888888888899999999999999988898999999999999
Q ss_pred ccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCc
Q 037111 426 FSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ 505 (964)
Q Consensus 426 Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 505 (964)
|++|++++.+|..+.++++|++|+|++|++++.+|.+++.+++|++|+|++|++++.+|..++.+++|++|++++|++++
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 552 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred ecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCC
Confidence 99999998899999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cchhhhh----------------------------------------------------------------------ccc
Q 037111 506 EIPIQLG----------------------------------------------------------------------KLV 515 (964)
Q Consensus 506 ~~~~~~~----------------------------------------------------------------------~l~ 515 (964)
.+|..+. .++
T Consensus 553 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~ 632 (768)
T 3rgz_A 553 TIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 632 (768)
T ss_dssp BCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSB
T ss_pred cCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccc
Confidence 7775443 346
Q ss_pred cCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCC-ccCCCCCccccc
Q 037111 516 QLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI-EAFRHAPVEALQ 594 (964)
Q Consensus 516 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~ 594 (964)
+|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.||||+|+++|.+|.. ..+..+....+.
T Consensus 633 ~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls 712 (768)
T 3rgz_A 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLS 712 (768)
T ss_dssp CCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECC
T ss_pred cccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECc
Confidence 7889999999999999999999999999999999999999999999999999999999999999863 234445555566
Q ss_pred CCC
Q 037111 595 GNK 597 (964)
Q Consensus 595 ~n~ 597 (964)
.|+
T Consensus 713 ~N~ 715 (768)
T 3rgz_A 713 NNN 715 (768)
T ss_dssp SSE
T ss_pred CCc
Confidence 665
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-61 Score=584.95 Aligned_cols=554 Identities=24% Similarity=0.248 Sum_probs=434.6
Q ss_pred ceeeceEeCC----------CCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeeccc
Q 037111 48 CTWSGISCNH----------AGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSS 117 (964)
Q Consensus 48 C~w~gv~C~~----------~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 117 (964)
|.+..|.|+. ..+++.++|+++.+++. ++..+..+++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRL-PAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCC-CGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCc-CHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 4555566642 14677888888877753 222466778888888888888887788888888888888888
Q ss_pred CCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCC
Q 037111 118 NHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIP 196 (964)
Q Consensus 118 n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 196 (964)
|.+++..+..|+.+++|++|+|++|++++.+|. ++.+++|++|+|++|.+++..|..++++++|++|++++|++++..+
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred CccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 888854444688888888888888888877664 7888888888888888888778888888888888888888887666
Q ss_pred cccc--CCCCcchhhcccccccCCccccccCcc---------------------------ccceeeccccccCCCChhhh
Q 037111 197 SSIG--NLSNLVYLFLKKNHLRGPIPSSFGYLR---------------------------KLTKLELSNNQLSGSIPQEI 247 (964)
Q Consensus 197 ~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~---------------------------~L~~L~L~~N~l~~~~p~~~ 247 (964)
..+. .+++|++|++++|.+++..|..|..+. +|+.|++++|.+++..|..+
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 6544 457888888888888877777666543 45666666666666666667
Q ss_pred hcccc--cceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc-----cCC----
Q 037111 248 GNLKL--LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG-----FLP---- 316 (964)
Q Consensus 248 ~~l~~--L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-----~~p---- 316 (964)
..++. |+.|+|++|++++..|..+..+++|++|++++|++++..|..|..+++|+.|++++|...+ .+|
T Consensus 243 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~ 322 (680)
T 1ziw_A 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322 (680)
T ss_dssp GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECT
T ss_pred hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccCh
Confidence 66654 7777777777776666677777777777777777777777777777777777777665442 122
Q ss_pred cccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccc--cccCcccCCC--CCCcEEEccCCeeccccCcccc
Q 037111 317 QNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLI--GNISDDFGIY--PNLKLFDLSYNKFYGELSSNWW 392 (964)
Q Consensus 317 ~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l--~~L~~L~Ls~N~i~~~~~~~~~ 392 (964)
..+..+++|++|++++|.+.+..+..|.++++|+.|++++|.+. ......|..+ ++|+.|++++|++++..+..+.
T Consensus 323 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~ 402 (680)
T 1ziw_A 323 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS 402 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTT
T ss_pred hhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhh
Confidence 25666777788888888777777777777888888888877643 2333344433 4788888888888888888888
Q ss_pred CCCccceEeecccccCCCCC-CCCcccccCcEEeccCCcccccCCccccccCCcceeeccccccc--CCCchhhhccCCC
Q 037111 393 NCPQLGILKIAGNNITGGIP-PEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS--GGIPPELGLLTDL 469 (964)
Q Consensus 393 ~~~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L 469 (964)
.+++|+.|++++|.+++.++ ..+.++++|++|++++|++.+..+..|..+++|+.|++++|.+. +..|..+..+++|
T Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L 482 (680)
T 1ziw_A 403 WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482 (680)
T ss_dssp TCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC
T ss_pred CCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC
Confidence 89999999999999876554 67888899999999999998888888999999999999999887 5788899999999
Q ss_pred CceecccCccccccCCCcccccccceecCCccccCccch--------hhhhccccCCeecccCccccCCCChhccccccc
Q 037111 470 GYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIP--------IQLGKLVQLSELDLSHNLLRGEIPPEICNLESL 541 (964)
Q Consensus 470 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 541 (964)
++|+|++|++++..+..|..+++|++|+|++|++++..+ ..|..+++|+.|+|++|+++...+..|.++++|
T Consensus 483 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 999999999998888889999999999999999986532 237889999999999999995555679999999
Q ss_pred ceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCc--cCCCCCcccccCCCCccCC
Q 037111 542 EKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIE--AFRHAPVEALQGNKGLCGE 602 (964)
Q Consensus 542 ~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~ 602 (964)
+.|+|++|+|++..+..|..+++|+.|++++|++++.+|..- .++.+....+.+|||.|+.
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 999999999998888889999999999999999999776532 4677778889999999974
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-59 Score=567.32 Aligned_cols=501 Identities=21% Similarity=0.200 Sum_probs=425.3
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
.+|-...+++++|||++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|. ++.++
T Consensus 26 ~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 105 (606)
T 3t6q_A 26 EIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPK 105 (606)
T ss_dssp SCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCT
T ss_pred cCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccc
Confidence 55666677899999999999988899999999999999999999988899999999999999999999988774 89999
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccc--eee
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT--KLE 233 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~ 233 (964)
+|++|+|++|++++..|..++++++|++|++++|++++..+..+..+++|++|+|++|.+++..|..|+.+++|+ .|+
T Consensus 106 ~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~ 185 (606)
T 3t6q_A 106 ALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLN 185 (606)
T ss_dssp TCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEE
T ss_pred cccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEe
Confidence 999999999999987788899999999999999999975545555699999999999999988899999999999 899
Q ss_pred ccccccCCCChhhhhcccccceeeccccccc--------------------------cccCCcccCcc--ccceeecccc
Q 037111 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR--------------------------GTVPSSLSNLS--SLEILHLYDN 285 (964)
Q Consensus 234 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--------------------------~~~p~~l~~l~--~L~~L~L~~N 285 (964)
+++|.+++..|..+.. .+|+.|++++|... ...+..+..+. +|+.|++++|
T Consensus 186 l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n 264 (606)
T 3t6q_A 186 LNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKH 264 (606)
T ss_dssp CTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTC
T ss_pred cCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecC
Confidence 9999999877766554 67999999887511 01112222222 7888899999
Q ss_pred cccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCcccc-ccC
Q 037111 286 QLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG-NIS 364 (964)
Q Consensus 286 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~ 364 (964)
.+++..+..|..+++|+.|++++|+++ .+|..+..+++|++|++++|.+.+..|..+.++++|+.|++++|.+.+ ...
T Consensus 265 ~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 343 (606)
T 3t6q_A 265 YFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGT 343 (606)
T ss_dssp CCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCS
T ss_pred ccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccch
Confidence 888777777888899999999999888 567778888889999999998888888888888899999999998875 444
Q ss_pred cccCCCCCCcEEEccCCeecccc--CccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCcc-ccc
Q 037111 365 DDFGIYPNLKLFDLSYNKFYGEL--SSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLE-LAN 441 (964)
Q Consensus 365 ~~~~~l~~L~~L~Ls~N~i~~~~--~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-l~~ 441 (964)
..+..+++|+.|++++|++.+.. +..+..+++|++|++++|.+++..+..+..+++|++|++++|++++..+.. +..
T Consensus 344 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 423 (606)
T 3t6q_A 344 GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQN 423 (606)
T ss_dssp STTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTT
T ss_pred hhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhC
Confidence 55888889999999999888766 667888889999999999888888888888888999999999888765544 788
Q ss_pred cCCcceeecccccccCCCchhhhccCCCCceecccCccccc---cCCCcccccccceecCCccccCccchhhhhccccCC
Q 037111 442 LTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKS---IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS 518 (964)
Q Consensus 442 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 518 (964)
+++|++|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|++|++++|++++..|..|+.+++|+
T Consensus 424 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp CTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCC
Confidence 88899999999988888888888888999999999988762 235688888899999999999888888888889999
Q ss_pred eecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 519 ELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 519 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
.|+|++|++++..|..+.++++| .|+|++|++++.+|..|..+++|+.|++++|+++|.++
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred EEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999988888888888888 89999999988888888888889999999999888665
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-58 Score=560.76 Aligned_cols=537 Identities=23% Similarity=0.239 Sum_probs=465.6
Q ss_pred eCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcc
Q 037111 55 CNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134 (964)
Q Consensus 55 C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 134 (964)
|...++ .+++++.+++ .+|....+++++|+|++|.+++..|..|+++++|++|+|++|.+++..|..++.+++|
T Consensus 2 C~~~~~--~~~cs~~~L~----~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 75 (680)
T 1ziw_A 2 CTVSHE--VADCSHLKLT----QVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPML 75 (680)
T ss_dssp --CBSS--EEECCSSCCS----SCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTC
T ss_pred ceeECC--eeECCCCCcc----ccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCc
Confidence 543343 4677777665 4555566899999999999998877889999999999999999999999999999999
Q ss_pred cEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccc
Q 037111 135 EVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKN 213 (964)
Q Consensus 135 ~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 213 (964)
++|+|++|.+++.++. ++.+++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|+|++|
T Consensus 76 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 76 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 9999999999988774 999999999999999999888889999999999999999999999999999999999999999
Q ss_pred cccCCcccccc--CccccceeeccccccCCCChhhhhcc---------------------------cccceeeccccccc
Q 037111 214 HLRGPIPSSFG--YLRKLTKLELSNNQLSGSIPQEIGNL---------------------------KLLTDLSLSQNQLR 264 (964)
Q Consensus 214 ~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l---------------------------~~L~~L~L~~N~l~ 264 (964)
.+++..+..+. .+++|++|++++|++++..|..+..+ ++|+.|++++|.++
T Consensus 156 ~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~ 235 (680)
T 1ziw_A 156 KIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLS 235 (680)
T ss_dssp CCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCC
T ss_pred cccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCccc
Confidence 99988887765 45899999999999998888777654 45778888888898
Q ss_pred cccCCcccCccc--cceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccc-----
Q 037111 265 GTVPSSLSNLSS--LEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIG----- 337 (964)
Q Consensus 265 ~~~p~~l~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~----- 337 (964)
+..|..+..++. |++|+|++|++++..|..|+.+++|+.|++++|++++..|..+..+++|++|++++|...+
T Consensus 236 ~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~ 315 (680)
T 1ziw_A 236 TTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLA 315 (680)
T ss_dssp EECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC-----
T ss_pred ccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccc
Confidence 888888888765 9999999999998888899999999999999999999999999999999999999876543
Q ss_pred cccc----cccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeecc--ccCccccCC--CccceEeecccccCC
Q 037111 338 SLPK----TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYG--ELSSNWWNC--PQLGILKIAGNNITG 409 (964)
Q Consensus 338 ~~p~----~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~--~~~~~~~~~--~~L~~L~L~~n~i~~ 409 (964)
.+|. .+..+++|+.|++++|.+++..+..|..+++|+.|++++|.+.. .....|..+ ++|+.|++++|.+++
T Consensus 316 ~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~ 395 (680)
T 1ziw_A 316 SLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISK 395 (680)
T ss_dssp -CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCE
T ss_pred cccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCe
Confidence 2332 78889999999999999999999999999999999999998543 223334433 689999999999999
Q ss_pred CCCCCCcccccCcEEeccCCcccccCC-ccccccCCcceeecccccccCCCchhhhccCCCCceecccCccc--cccCCC
Q 037111 410 GIPPEIGNATQLHELDFSSNHLVGKVP-LELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS--KSIPGN 486 (964)
Q Consensus 410 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~ 486 (964)
..|.+|..+++|++|+|++|++.+.+| ..|..+++|++|+|++|.+++..+..|..+++|+.|++++|.+. +..|..
T Consensus 396 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~ 475 (680)
T 1ziw_A 396 IESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP 475 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCT
T ss_pred EChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcc
Confidence 999999999999999999999987665 68899999999999999999888999999999999999999987 568889
Q ss_pred cccccccceecCCccccCccchhhhhccccCCeecccCccccCCCC--------hhcccccccceeeccCCcCCCccccc
Q 037111 487 MGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIP--------PEICNLESLEKLNLSHNNLSGSIPTN 558 (964)
Q Consensus 487 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~ 558 (964)
|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+ ..|.++++|+.|+|++|+|+...+..
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~ 555 (680)
T 1ziw_A 476 FQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEV 555 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred cccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHH
Confidence 9999999999999999998888889999999999999999986422 23788999999999999999666678
Q ss_pred ccccccceEEEecCCcccccCCCC-ccCCCCCcccccCCC
Q 037111 559 FENMHGLLSIDISYNELDGPIPSI-EAFRHAPVEALQGNK 597 (964)
Q Consensus 559 ~~~l~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~~n~ 597 (964)
|.++++|+.||+++|++++.++.. ..+..+....+.+|.
T Consensus 556 ~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~ 595 (680)
T 1ziw_A 556 FKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNL 595 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred cccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCc
Confidence 999999999999999999766543 233445555566663
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-58 Score=554.63 Aligned_cols=494 Identities=22% Similarity=0.224 Sum_probs=421.6
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
.+|....++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+|. ++.++
T Consensus 25 ~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 104 (606)
T 3vq2_A 25 KVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLT 104 (606)
T ss_dssp SCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCT
T ss_pred cCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcc
Confidence 45556668899999999999988888899999999999999999987788899999999999999999988664 88999
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCC-CCCccccCCCCcchhhcccccccCCccccccCccccc----
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT---- 230 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---- 230 (964)
+|++|+|++|++++..|..++++++|++|++++|++++ .+|..|+++++|++|+|++|++++..+..|+.+++|+
T Consensus 105 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~ 184 (606)
T 3vq2_A 105 SLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNL 184 (606)
T ss_dssp TCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCC
T ss_pred cCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccc
Confidence 99999999999998777889999999999999999986 5688999999999999999999988888888888776
Q ss_pred eeeccccccCCCChhhhhcccccceeeccccccc-cccCCcccCccccceeec---------------------------
Q 037111 231 KLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR-GTVPSSLSNLSSLEILHL--------------------------- 282 (964)
Q Consensus 231 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L--------------------------- 282 (964)
+|++++|.+++..+..+... +|+.|++++|.++ +..|..+.++++|+.+++
T Consensus 185 ~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l 263 (606)
T 3vq2_A 185 SLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTI 263 (606)
T ss_dssp EEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEE
T ss_pred eeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccH
Confidence 79999999986655555544 8999999999886 345556666666666655
Q ss_pred ------ccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCC
Q 037111 283 ------YDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEK 356 (964)
Q Consensus 283 ------~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~ 356 (964)
..|.+.+.+|. +..+++|+.|++++|.+... | .+..+++|+.|++++|.+ +.+| .+ .+++|+.|++++
T Consensus 264 ~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~ 337 (606)
T 3vq2_A 264 DEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYL-E-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTM 337 (606)
T ss_dssp EEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCC-C-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEES
T ss_pred hheeccccccccccccc-cccCCCCCEEEecCccchhh-h-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccC
Confidence 56667766666 88889999999999998754 4 788888999999999998 6677 44 889999999999
Q ss_pred CccccccCcccCCCCCCcEEEccCCeecccc--CccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCccccc
Q 037111 357 NQLIGNISDDFGIYPNLKLFDLSYNKFYGEL--SSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGK 434 (964)
Q Consensus 357 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~--~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 434 (964)
|...+.. .+..+++|+.|++++|++++.. +..+..+++|++|++++|.+++ +|..+..+++|++|++++|++.+.
T Consensus 338 n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~ 414 (606)
T 3vq2_A 338 NKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRV 414 (606)
T ss_dssp CSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEEST
T ss_pred CcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCc
Confidence 9654433 6778899999999999998763 6777889999999999999885 458888999999999999999887
Q ss_pred CC-ccccccCCcceeecccccccCCCchhhhccCCCCceecccCcccc-ccCCCcccccccceecCCccccCccchhhhh
Q 037111 435 VP-LELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSK-SIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512 (964)
Q Consensus 435 ~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 512 (964)
.| ..+..+++|++|++++|.+++..|..+..+++|++|++++|++++ ..|..|..+++|++|+|++|++++..|..|+
T Consensus 415 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 494 (606)
T 3vq2_A 415 TEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD 494 (606)
T ss_dssp TTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhc
Confidence 77 678899999999999999998888899999999999999999987 4788899999999999999999988888899
Q ss_pred ccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccc-cceEEEecCCcccccCCC
Q 037111 513 KLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMH-GLLSIDISYNELDGPIPS 581 (964)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~l~ls~N~l~~~~~~ 581 (964)
.+++|+.|+|++|++++.+|..|.++++|+.|+|++|+|+ .+|..+..++ +|+.|++++|++.|.++.
T Consensus 495 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 495 TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9999999999999999888899999999999999999998 5777788887 599999999999987764
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-59 Score=564.16 Aligned_cols=486 Identities=19% Similarity=0.259 Sum_probs=340.1
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCC-------CCCCCCCCCCCCCCCcee---eceEeCCCCCeeEEecCCCCCCCccC
Q 037111 7 SNSIEAARGLLKWKATLQNHNNSLLP-------SWTLDPVNATNITTPCTW---SGISCNHAGRIISINLTSTSLKGTLD 76 (964)
Q Consensus 7 ~~~~~~~~all~~k~~~~~~~~~~l~-------sW~~~~~~~~~~~~~C~w---~gv~C~~~~~v~~l~l~~~~l~g~l~ 76 (964)
.+.+.|++||++||.++.+++|..-. +|..+ ++||.| .||+|+..|||++|+|+++++.|.++
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-------~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp 98 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-------KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVP 98 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-------SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEEC
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-------CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCC
Confidence 34557999999999999877665433 78743 789999 99999988999999999999999988
Q ss_pred CCccCcCcceeEEeccCCcc------cc------CCCccccCCCCcCeeecccCCccCcCCcccCC-CCcccEEEcc---
Q 037111 77 QFPFSLFSHLSYLDLNENQL------YG------NIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGL-LTNLEVLHMF--- 140 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l------~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~l~--- 140 (964)
+ .++.+++|++|||++|.+ .| .+|... +..|+ +++++|.+.+.+|..++. +..+..+++.
T Consensus 99 ~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~ 174 (636)
T 4eco_A 99 D-AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKS 174 (636)
T ss_dssp G-GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCC
T ss_pred h-HHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccc
Confidence 6 688999999999999987 33 455544 66778 899999998888887762 2222222322
Q ss_pred -----------------ccccCCcccccCCCCCCCEEEcCCCCCCCC-----------------CCCCCC--CCCCCcEE
Q 037111 141 -----------------VNHLNGSIPEIGHLSSLKNLALDGNHLDGP-----------------IPVSIG--NLSSLVGL 184 (964)
Q Consensus 141 -----------------~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~~L 184 (964)
.|+++|.++.++.+++|++|+|++|+++|. +|..++ ++++|++|
T Consensus 175 ~~~~~~~~l~~l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L 254 (636)
T 4eco_A 175 IKKSSRITLKDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDV 254 (636)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred cccccccchhhhhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEE
Confidence 567777333477777888888888877775 777777 77788888
Q ss_pred EEecCCCCCCCCccccCCCCcchhhccccc-ccC-CccccccCc------cccceeeccccccCCCChh--hhhcccccc
Q 037111 185 YLYNNSLPGSIPSSIGNLSNLVYLFLKKNH-LRG-PIPSSFGYL------RKLTKLELSNNQLSGSIPQ--EIGNLKLLT 254 (964)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~ 254 (964)
+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .++.+++|+
T Consensus 255 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~ 333 (636)
T 4eco_A 255 EVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLG 333 (636)
T ss_dssp EEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCC
T ss_pred EecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCC
Confidence 888887777777777777778888888777 777 677777665 77777777777777 6666 777777777
Q ss_pred eeeccccccccccCCcccCccccceeecccccccccCCcccccCcc-ccEEEeeCccCcccCCcccccCC--cceEEEee
Q 037111 255 DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN-LNSLSVGGNQFTGFLPQNICQSG--SLQYFSVH 331 (964)
Q Consensus 255 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~~~--~L~~L~l~ 331 (964)
+|++++|+++|.+| .+..+++|++|+|++|+++ .+|..+..+++ |+.|++++|+++ .+|..+.... +|++|+++
T Consensus 334 ~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls 410 (636)
T 4eco_A 334 MLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFS 410 (636)
T ss_dssp EEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECC
T ss_pred EEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECc
Confidence 77777777777777 7777777777777777777 67777777777 777777777777 4566555543 67777777
Q ss_pred ccccccccccccc-------CCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecc
Q 037111 332 DNYFIGSLPKTLR-------NCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAG 404 (964)
Q Consensus 332 ~n~l~~~~p~~l~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~ 404 (964)
+|.+.+.+|..+. .+++|+.|+|++|+++.++...+..+++|+.|+|++|+++......+....
T Consensus 411 ~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~--------- 481 (636)
T 4eco_A 411 YNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDEN--------- 481 (636)
T ss_dssp SSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETT---------
T ss_pred CCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccc---------
Confidence 7777776666666 555666666666666655555555566666666666666533222222111
Q ss_pred cccCCCCCCCCcccccCcEEeccCCcccccCCcccc--ccCCcceeecccccccCCCchhhhccCCCCceec------cc
Q 037111 405 NNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELA--NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDL------SA 476 (964)
Q Consensus 405 n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L------s~ 476 (964)
..+.++++|++|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++
T Consensus 482 --------~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~ 551 (636)
T 4eco_A 482 --------ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQG 551 (636)
T ss_dssp --------EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTC
T ss_pred --------ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCccccc
Confidence 00112225566666666655 4455544 55666666666666654 5555555666666665 55
Q ss_pred CccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccC
Q 037111 477 NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG 529 (964)
Q Consensus 477 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 529 (964)
|++.+.+|..+..+++|++|+|++|+| +.+|..+. ++|+.|+|++|++..
T Consensus 552 N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 552 NRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred CcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 667777777777777777777777777 45665554 677778888887664
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-57 Score=566.26 Aligned_cols=485 Identities=21% Similarity=0.195 Sum_probs=331.0
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC-CcccCCCCcccEEEccccccCCcccc-cCCCCCCCE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI-PSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKN 159 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~ 159 (964)
.+++|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|. ++.+++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 4566666666666666666666666666666666666555455 55566666666666666666665553 666666666
Q ss_pred EEcCCCCCCCCCCCC--CCCCCCCcEEEEecCCCCCCCC-ccccCCCCcchhhcccccccCCccccccCc--cccceeec
Q 037111 160 LALDGNHLDGPIPVS--IGNLSSLVGLYLYNNSLPGSIP-SSIGNLSNLVYLFLKKNHLRGPIPSSFGYL--RKLTKLEL 234 (964)
Q Consensus 160 L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L 234 (964)
|+|++|.+++.+|.. ++++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..+..|..+ ++|+.|+|
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 666666666655443 6666666666666666665443 456666666666666666666666666655 56666666
Q ss_pred cccccCCCChhhhhcccc------cceeeccccccccccCCccc------------------------------------
Q 037111 235 SNNQLSGSIPQEIGNLKL------LTDLSLSQNQLRGTVPSSLS------------------------------------ 272 (964)
Q Consensus 235 ~~N~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~p~~l~------------------------------------ 272 (964)
++|.+.+..|..++.+.+ |+.|++++|++++..+..+.
T Consensus 182 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~ 261 (844)
T 3j0a_A 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFA 261 (844)
T ss_dssp CCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTT
T ss_pred CCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhh
Confidence 666666655555554443 66666666666554444332
Q ss_pred Cc--cccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCC
Q 037111 273 NL--SSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLE 350 (964)
Q Consensus 273 ~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~ 350 (964)
.+ ++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..+..+++|++|++++|.+.+..|..|..+++|+
T Consensus 262 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 341 (844)
T 3j0a_A 262 GLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVA 341 (844)
T ss_dssp TTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCC
T ss_pred ccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCC
Confidence 22 5677777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred eeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCc
Q 037111 351 RVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNH 430 (964)
Q Consensus 351 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~ 430 (964)
.|++++|.++.+.+..|..+++|+.|+|++|.+++.. .+++|+.|++++|.++. +|.. ..+++.|++++|+
T Consensus 342 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~~-l~~~---~~~l~~L~ls~N~ 412 (844)
T 3j0a_A 342 YIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLVT-LPKI---NLTANLIHLSENR 412 (844)
T ss_dssp EEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCCC-CCCC---CTTCCEEECCSCC
T ss_pred EEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCccc-cccc---ccccceeecccCc
Confidence 7777777777777777777777777777777776432 26677777777777763 3332 3567777788777
Q ss_pred ccccCC-ccccccCCcceeecccccccCCCch-hhhccCCCCceecccCccc-----cccCCCcccccccceecCCcccc
Q 037111 431 LVGKVP-LELANLTSLNDLILNGNQLSGGIPP-ELGLLTDLGYLDLSANRFS-----KSIPGNMGYLLKLHYLNMSSNEF 503 (964)
Q Consensus 431 l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l 503 (964)
+++... ..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|
T Consensus 413 l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 492 (844)
T 3j0a_A 413 LENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492 (844)
T ss_dssp CCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH
T ss_pred cccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc
Confidence 765322 2245677788888888877754332 3455677888888888776 33445577777788888888888
Q ss_pred CccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 504 SQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 504 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
++..|..|..+++|+.|+|++|+|++..+..+. ++|+.|+|++|+|++.+|..|. +|+.+++++|++.|.++
T Consensus 493 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICECE 564 (844)
T ss_dssp TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCSSS
T ss_pred cccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCcccccc
Confidence 777777777788888888888888765555554 6788888888888877776654 56777888888877665
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-57 Score=544.77 Aligned_cols=504 Identities=20% Similarity=0.205 Sum_probs=450.1
Q ss_pred cCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCC
Q 037111 92 NENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGP 170 (964)
Q Consensus 92 ~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~ 170 (964)
++..++ .+|..+.. .+++|+|++|.|++..|..|+.+++|++|+|++|++++..|. |+.+++|++|+|++|++++.
T Consensus 20 ~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 96 (606)
T 3t6q_A 20 ENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFM 96 (606)
T ss_dssp TTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEE
T ss_pred CCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCccccc
Confidence 344555 56776643 799999999999988899999999999999999999988775 89999999999999999999
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcc
Q 037111 171 IPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNL 250 (964)
Q Consensus 171 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 250 (964)
.|..|+++++|++|++++|++++..|..++++++|++|+|++|++++.....+..+++|++|++++|.+++..|..++.+
T Consensus 97 ~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 176 (606)
T 3t6q_A 97 AETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSL 176 (606)
T ss_dssp CTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTT
T ss_pred ChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhh
Confidence 99999999999999999999998778889999999999999999998655555569999999999999998889999999
Q ss_pred cccc--eeeccccccccccCCcccCccccceeeccccccc--------------------------ccCCcccccCc--c
Q 037111 251 KLLT--DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS--------------------------GHIPQEIGNFM--N 300 (964)
Q Consensus 251 ~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--------------------------~~~~~~~~~l~--~ 300 (964)
++|+ .|++++|++++..|..+. ..+|+.|++++|... ...+..+..+. +
T Consensus 177 ~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~ 255 (606)
T 3t6q_A 177 QQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMS 255 (606)
T ss_dssp TTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSE
T ss_pred cccceeEEecCCCccCccChhHhh-hccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCc
Confidence 9999 899999999987777665 468999999887511 01122333333 7
Q ss_pred ccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccC
Q 037111 301 LNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380 (964)
Q Consensus 301 L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 380 (964)
|+.|++++|.+++..+..+..+++|++|++++|.+. .+|..+..+++|++|++++|.+++..+..+..+++|+.|++++
T Consensus 256 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 334 (606)
T 3t6q_A 256 VESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKG 334 (606)
T ss_dssp EEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCS
T ss_pred eeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCC
Confidence 999999999999999999999999999999999988 6788899999999999999999999999999999999999999
Q ss_pred CeeccccC-ccccCCCccceEeecccccCCCC--CCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccC
Q 037111 381 NKFYGELS-SNWWNCPQLGILKIAGNNITGGI--PPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSG 457 (964)
Q Consensus 381 N~i~~~~~-~~~~~~~~L~~L~L~~n~i~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 457 (964)
|.+.+..+ ..+..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..|..|..+++|++|+|++|.+++
T Consensus 335 n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 414 (606)
T 3t6q_A 335 NTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKV 414 (606)
T ss_dssp CSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEEC
T ss_pred CCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCC
Confidence 99986554 45889999999999999998766 7889999999999999999999999999999999999999999997
Q ss_pred CCch-hhhccCCCCceecccCccccccCCCcccccccceecCCccccCcc---chhhhhccccCCeecccCccccCCCCh
Q 037111 458 GIPP-ELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQE---IPIQLGKLVQLSELDLSHNLLRGEIPP 533 (964)
Q Consensus 458 ~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 533 (964)
..+. .+..+++|++|++++|.+++..|..+..+++|++|++++|++++. .+..+..+++|+.|+|++|++++..|.
T Consensus 415 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 494 (606)
T 3t6q_A 415 KDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQH 494 (606)
T ss_dssp CTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTT
T ss_pred cccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChh
Confidence 7664 489999999999999999999999999999999999999999873 236799999999999999999998899
Q ss_pred hcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCC-ccCCCCCcccccCCCCccC
Q 037111 534 EICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI-EAFRHAPVEALQGNKGLCG 601 (964)
Q Consensus 534 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~ 601 (964)
.|.++++|+.|+|++|++++..|..|..++.| .||+++|++++.+|.. ..++.+....+.+||+.|+
T Consensus 495 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 495 AFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp TTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred hhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 99999999999999999999999999999999 9999999999887753 3456677788999999995
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-57 Score=553.16 Aligned_cols=510 Identities=17% Similarity=0.220 Sum_probs=374.0
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCC--cee------------eceEeCCCCCeeEEecCCCCC
Q 037111 6 ASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTP--CTW------------SGISCNHAGRIISINLTSTSL 71 (964)
Q Consensus 6 ~~~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~--C~w------------~gv~C~~~~~v~~l~l~~~~l 71 (964)
+++..+|++||++||+++.+ | +|+.+...+ ..+| |.| .||+|+..+||+.|+|+++++
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~-~-----~W~~~~~~~--~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L 335 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDG-K-----NWRYYSGTI--NNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGA 335 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTG-G-----GCCCCCSSC--SSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCC
T ss_pred cccchHHHHHHHHHHHHcCC-C-----CCCcCCCcc--cccCCccccccccccccccCcCceEecCCCCEEEEECccCCC
Confidence 44556799999999999964 3 787543111 1244 999 999999889999999999999
Q ss_pred CCccCCCccCcCcceeEEec-cCCccccCCCccccCC----CC-----cCe------eec-ccCCccC-----------c
Q 037111 72 KGTLDQFPFSLFSHLSYLDL-NENQLYGNIPSPIGNL----TK-----LKF------LNL-SSNHFSG-----------K 123 (964)
Q Consensus 72 ~g~l~~~~~~~~~~L~~L~l-~~n~l~~~~p~~~~~l----~~-----L~~------L~L-s~n~l~~-----------~ 123 (964)
.|.+++ .++.+++|++||| ++|.++|..|-..... +. ++. ++. ....+++ .
T Consensus 336 ~G~ip~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 336 KGRVPD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp EEEECG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCcCch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 998875 6788999999999 8888888744321111 00 000 000 0000000 0
Q ss_pred CCcccCCCCcccEEEcc--ccccCCcccccCCCCCCCEEEcCCCCCCC-----------------CCCCCCC--CCCCCc
Q 037111 124 IPSEIGLLTNLEVLHMF--VNHLNGSIPEIGHLSSLKNLALDGNHLDG-----------------PIPVSIG--NLSSLV 182 (964)
Q Consensus 124 ~p~~~~~l~~L~~L~l~--~n~l~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~ 182 (964)
.+........++.+.+. .|++++.++.++.+++|++|+|++|+|+| .+|..++ ++++|+
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred cccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 01111122233333333 36666633346777777777777777776 4888887 889999
Q ss_pred EEEEecCCCCCCCCccccCCCCcchhhccccc-ccC-CccccccCcc-------ccceeeccccccCCCChh--hhhccc
Q 037111 183 GLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNH-LRG-PIPSSFGYLR-------KLTKLELSNNQLSGSIPQ--EIGNLK 251 (964)
Q Consensus 183 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~ 251 (964)
+|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|++|+|++|+++ .+|. .+++++
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~ 573 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMV 573 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCT
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCC
Confidence 99999998888889888899999999999997 887 7887777666 8999999999998 7777 888999
Q ss_pred ccceeeccccccccccCCcccCccccceeecccccccccCCcccccCcc-ccEEEeeCccCcccCCcccccCCc--ceEE
Q 037111 252 LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN-LNSLSVGGNQFTGFLPQNICQSGS--LQYF 328 (964)
Q Consensus 252 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~~~~--L~~L 328 (964)
+|++|+|++|+++ .+| .+..+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|..+..... |+.|
T Consensus 574 ~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L 649 (876)
T 4ecn_A 574 KLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSV 649 (876)
T ss_dssp TCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEE
T ss_pred CCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEE
Confidence 9999999999998 777 7888999999999999998 78888888888 999999999988 56777766654 9999
Q ss_pred Eeecccccccccccc---c--CCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccC-------CCc
Q 037111 329 SVHDNYFIGSLPKTL---R--NCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWN-------CPQ 396 (964)
Q Consensus 329 ~l~~n~l~~~~p~~l---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-------~~~ 396 (964)
++++|.+.+.+|... . .+.+|+.|+|++|.++.++...+..+++|+.|+|++|+++......+.. +++
T Consensus 650 ~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~ 729 (876)
T 4ecn_A 650 DFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYL 729 (876)
T ss_dssp ECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGG
T ss_pred ECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCC
Confidence 999999888666432 2 3458999999999999777777778899999999999998544444332 348
Q ss_pred cceEeecccccCCCCCCCCc--ccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceec
Q 037111 397 LGILKIAGNNITGGIPPEIG--NATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDL 474 (964)
Q Consensus 397 L~~L~L~~n~i~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 474 (964)
|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++|. ++
T Consensus 730 L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~l 789 (876)
T 4ecn_A 730 LTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------DA 789 (876)
T ss_dssp CCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------CT
T ss_pred ccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------------------Cc
Confidence 999999999999 6777776 89999999999999996 78889999999999998865 45
Q ss_pred ccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCC
Q 037111 475 SANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 475 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+..+.....+..+.|.+|++.
T Consensus 790 s~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 790 EGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp TCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred ccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 55666666666666666666666666666 44555444 46666666666666555555555555556666666554
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-56 Score=536.26 Aligned_cols=502 Identities=22% Similarity=0.212 Sum_probs=444.0
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNH 166 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~ 166 (964)
.++.++++++ .+|..+. ++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|. ++.+++|++|+|++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4555667787 5777664 8999999999999988888999999999999999999998775 8999999999999999
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccC-CccccccCccccceeeccccccCCCChh
Q 037111 167 LDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQ 245 (964)
Q Consensus 167 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 245 (964)
+++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|.+++ .+|..|+.+++|++|+|++|++++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 999889999999999999999999998877899999999999999999987 5699999999999999999999988888
Q ss_pred hhhcccccc----eeeccccccccccCCcccCccccceeeccccccc-ccCCcccccCccccEEEe--------------
Q 037111 246 EIGNLKLLT----DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS-GHIPQEIGNFMNLNSLSV-------------- 306 (964)
Q Consensus 246 ~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l-------------- 306 (964)
.++.+++|+ +|++++|.+++..+..+.. .+|+.|++++|.++ +.+|..+.++++|+.+++
T Consensus 172 ~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 172 DLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp TTHHHHHCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhhccccccceeeccCCCcceeCcccccC-ceeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 888888776 7999999999666655554 49999999999987 355667777777776666
Q ss_pred -------------------eCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCccc
Q 037111 307 -------------------GGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDF 367 (964)
Q Consensus 307 -------------------~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 367 (964)
..|.+.+..|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|.+..+ + .+
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~~l-p-~~ 325 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLKQF-P-TL 325 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCSSC-C-CC
T ss_pred ChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccCccc-c-cC
Confidence 66677777776 8888999999999999865 45 889999999999999999544 4 45
Q ss_pred CCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCC--CCCCCcccccCcEEeccCCcccccCCccccccCCc
Q 037111 368 GIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGG--IPPEIGNATQLHELDFSSNHLVGKVPLELANLTSL 445 (964)
Q Consensus 368 ~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 445 (964)
.+++|+.|++++|+..+.. .+..+++|++|++++|.+++. .+..+..+++|++|++++|.+++ +|..+..+++|
T Consensus 326 -~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L 401 (606)
T 3vq2_A 326 -DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEEL 401 (606)
T ss_dssp -CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTC
T ss_pred -CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCC
Confidence 8999999999999655433 677899999999999999866 37788899999999999999985 66889999999
Q ss_pred ceeecccccccCCCc-hhhhccCCCCceecccCccccccCCCcccccccceecCCccccCc-cchhhhhccccCCeeccc
Q 037111 446 NDLILNGNQLSGGIP-PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ-EIPIQLGKLVQLSELDLS 523 (964)
Q Consensus 446 ~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls 523 (964)
+.|++++|.+++..| ..+..+++|++|++++|.+++..|..+..+++|++|++++|++++ .+|..|+.+++|+.|+|+
T Consensus 402 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls 481 (606)
T 3vq2_A 402 QHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLS 481 (606)
T ss_dssp CEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred CeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECC
Confidence 999999999998877 689999999999999999999999999999999999999999987 478899999999999999
Q ss_pred CccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCccCC-CCCcccccCCCCccCC
Q 037111 524 HNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFR-HAPVEALQGNKGLCGE 602 (964)
Q Consensus 524 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~-~~~~~~~~~n~~~c~~ 602 (964)
+|++++..|..|.++++|++|+|++|++++.+|..|..+++|+.||+++|+++..++....+. .+....+.+||+.|+.
T Consensus 482 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 482 KCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCC
Confidence 999999999999999999999999999999999999999999999999999996555444443 3666788999999964
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-55 Score=542.14 Aligned_cols=498 Identities=24% Similarity=0.215 Sum_probs=433.0
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcc-c-ccCCCCCCCEEEcCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSI-P-EIGHLSSLKNLALDGN 165 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-~-~~~~l~~L~~L~L~~n 165 (964)
..|.++++++ .+|. ..++|++|||++|.|++..|..|+.+++|++|+|++|...+.+ | .++.+++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 3445566676 4676 4689999999999999888999999999999999999777766 4 4899999999999999
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCCCcc--ccCCCCcchhhcccccccCCcc-ccccCccccceeeccccccCCC
Q 037111 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS--IGNLSNLVYLFLKKNHLRGPIP-SSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 166 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
.+++..|..|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+.+++|++|+|++|.+++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999877765 9999999999999999998765 5799999999999999999999
Q ss_pred Chhhhhcc--cccceeeccccccccccCCcccCccc------cceeecccccccccCCcccccC----------------
Q 037111 243 IPQEIGNL--KLLTDLSLSQNQLRGTVPSSLSNLSS------LEILHLYDNQLSGHIPQEIGNF---------------- 298 (964)
Q Consensus 243 ~p~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~L~~N~l~~~~~~~~~~l---------------- 298 (964)
.+..+..+ ++|+.|+|+.|.+.+..|..+..+++ |+.|++++|.+++.++..+...
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred CHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 99999988 89999999999999888887777665 9999999999887666555432
Q ss_pred ----------------------ccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCC
Q 037111 299 ----------------------MNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEK 356 (964)
Q Consensus 299 ----------------------~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~ 356 (964)
++|+.|++++|.+++..|..+..+++|+.|++++|.+.+..|..|.++++|+.|+|++
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 323 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEES
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCC
Confidence 5788999999999888888888899999999999999888888899999999999999
Q ss_pred CccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCC
Q 037111 357 NQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVP 436 (964)
Q Consensus 357 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 436 (964)
|.+++..+..|..+++|+.|++++|++....+..|..+++|+.|+|++|.+++. ..+++|+.|++++|+++ .+|
T Consensus 324 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~ 397 (844)
T 3j0a_A 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLP 397 (844)
T ss_dssp CCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCC
T ss_pred CCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccc
Confidence 999888888899999999999999999888888888899999999999988743 23778899999999987 445
Q ss_pred ccccccCCcceeecccccccCCC-chhhhccCCCCceecccCccccccCC-CcccccccceecCCccccC-----ccchh
Q 037111 437 LELANLTSLNDLILNGNQLSGGI-PPELGLLTDLGYLDLSANRFSKSIPG-NMGYLLKLHYLNMSSNEFS-----QEIPI 509 (964)
Q Consensus 437 ~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~ 509 (964)
.. ..+++.|++++|++++.. +..+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+.
T Consensus 398 ~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 398 KI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp CC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSS
T ss_pred cc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchh
Confidence 43 467899999999998643 23456899999999999999875544 4567899999999999997 34456
Q ss_pred hhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCccCCCCC
Q 037111 510 QLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAP 589 (964)
Q Consensus 510 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~ 589 (964)
.|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|||++|++++.+|. .|..+.
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~--~~~~L~ 550 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD--VFVSLS 550 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC--CCSSCC
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh--HhCCcC
Confidence 789999999999999999998899999999999999999999988888777 8999999999999999885 477788
Q ss_pred cccccCCCCccCC
Q 037111 590 VEALQGNKGLCGE 602 (964)
Q Consensus 590 ~~~~~~n~~~c~~ 602 (964)
...+.+||+.|+.
T Consensus 551 ~l~l~~Np~~C~c 563 (844)
T 3j0a_A 551 VLDITHNKFICEC 563 (844)
T ss_dssp EEEEEEECCCCSS
T ss_pred EEEecCCCccccc
Confidence 8889999999953
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-53 Score=504.92 Aligned_cols=497 Identities=22% Similarity=0.210 Sum_probs=435.6
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
.+|....+++++|||++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|++|.+++.+|. ++.++
T Consensus 21 ~ip~~l~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (570)
T 2z63_A 21 KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLS 100 (570)
T ss_dssp SCCSSSCSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCT
T ss_pred ccCCCccccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcc
Confidence 45656667899999999999988888999999999999999999987788899999999999999999988764 89999
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCC-CCCccccCCCCcchhhcccccccCCccccccCcccc----c
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKL----T 230 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~ 230 (964)
+|++|++++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..+..|+.+++| +
T Consensus 101 ~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~ 180 (570)
T 2z63_A 101 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180 (570)
T ss_dssp TCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCC
T ss_pred ccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhh
Confidence 99999999999997776689999999999999999997 479999999999999999999999888999999999 8
Q ss_pred eeeccccccCCCChhhhhcccccceeecccccccc-ccCCcccCccccceeeccccccc------ccCCcccccCc--cc
Q 037111 231 KLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG-TVPSSLSNLSSLEILHLYDNQLS------GHIPQEIGNFM--NL 301 (964)
Q Consensus 231 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~------~~~~~~~~~l~--~L 301 (964)
.|++++|.+++..|..+..+ +|+.|++++|.... .++..+..+++++.+.+..+.+. ......+..+. .+
T Consensus 181 ~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l 259 (570)
T 2z63_A 181 SLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTI 259 (570)
T ss_dssp EEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEE
T ss_pred hcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccch
Confidence 99999999998888877766 89999999986542 34555667777777666544332 12223344443 36
Q ss_pred cEEEeeCc-cCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccC
Q 037111 302 NSLSVGGN-QFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380 (964)
Q Consensus 302 ~~L~l~~N-~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 380 (964)
+.+++++| .+.+..|..+..+++|+.|++++|.+. .+|..+..+ +|+.|++++|.+...+. ..+++|+.|++++
T Consensus 260 ~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~---~~l~~L~~L~l~~ 334 (570)
T 2z63_A 260 EEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPT---LKLKSLKRLTFTS 334 (570)
T ss_dssp EEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCB---CBCSSCCEEEEES
T ss_pred hhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCc---ccccccCEEeCcC
Confidence 78888888 788889999999999999999999987 478888888 99999999999985544 4788999999999
Q ss_pred CeeccccCccccCCCccceEeecccccCCCC--CCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCC
Q 037111 381 NKFYGELSSNWWNCPQLGILKIAGNNITGGI--PPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGG 458 (964)
Q Consensus 381 N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 458 (964)
|.+.+..+. ..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..+. +..+++|++|++++|.+++.
T Consensus 335 n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~ 411 (570)
T 2z63_A 335 NKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQM 411 (570)
T ss_dssp CBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESC
T ss_pred Ccccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccc
Confidence 998776554 68899999999999998654 56788899999999999999865554 99999999999999999977
Q ss_pred Cc-hhhhccCCCCceecccCccccccCCCcccccccceecCCccccC-ccchhhhhccccCCeecccCccccCCCChhcc
Q 037111 459 IP-PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFS-QEIPIQLGKLVQLSELDLSHNLLRGEIPPEIC 536 (964)
Q Consensus 459 ~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 536 (964)
.+ ..+..+++|++|++++|.+.+..|..|..+++|++|++++|+++ +.+|..+..+++|+.|+|++|++++..|..|.
T Consensus 412 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 491 (570)
T 2z63_A 412 SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 491 (570)
T ss_dssp TTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhh
Confidence 66 57889999999999999999999999999999999999999997 57899999999999999999999988899999
Q ss_pred cccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCC
Q 037111 537 NLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI 582 (964)
Q Consensus 537 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~ 582 (964)
++++|+.|+|++|++++..|..|..+++|+.|++++|+++|.+|..
T Consensus 492 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 492 SLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred cccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 9999999999999999998899999999999999999999998864
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-53 Score=501.61 Aligned_cols=492 Identities=22% Similarity=0.232 Sum_probs=386.9
Q ss_pred CceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc
Q 037111 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS 126 (964)
Q Consensus 47 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 126 (964)
.|.|.|+ |+.. ++++ ..+|.+.+++|++|+|++|++++..|..|+++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~~---------~~~l----~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDGR---------SRSF----TSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EECT---------TSCC----SSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EECC---------CCcc----ccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999999 9643 2233 345656678999999999999998899999999999999999999988889
Q ss_pred ccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCC-CCCCCCCCCCCCcEEEEecCCCCCCCC-ccccCCC
Q 037111 127 EIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDG-PIPVSIGNLSSLVGLYLYNNSLPGSIP-SSIGNLS 203 (964)
Q Consensus 127 ~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~ 203 (964)
.|+.+++|++|+|++|++++.+|. ++.+++|++|+|++|++++ .+|..++++++|++|++++|++.+.+| ..|++++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 999999999999999999999887 9999999999999999997 467889999999999999999554555 6899999
Q ss_pred CcchhhcccccccCCccccccCccccceeeccccccCCCChhhh-hcccccceeecccccccccc--C-CcccCccccce
Q 037111 204 NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTV--P-SSLSNLSSLEI 279 (964)
Q Consensus 204 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~--p-~~l~~l~~L~~ 279 (964)
+|++|++++|++++..|..++.+++|++|++++|.+. .+|..+ ..+++|++|++++|++++.. | .....+++|+.
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 9999999999999999999999999999999999987 455544 56899999999999999642 2 22345788999
Q ss_pred eecccccccccCC----cccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecC
Q 037111 280 LHLYDNQLSGHIP----QEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355 (964)
Q Consensus 280 L~L~~N~l~~~~~----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 355 (964)
|++++|.+++..+ ..+..+++|+.+++++|.+.+...-.. .....+..+.+|+.|++.
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~------------------~~~~~~~~l~~L~~L~l~ 289 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNP------------------SESDVVSELGKVETVTIR 289 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCC------------------CTTTCCCCCTTCCEEEEE
T ss_pred eeccccccchhHHHHHHHHhhhhccccccccccccccccccccc------------------cchhhhhhhccccccccc
Confidence 9999999886544 344667889999999998876421100 001122334444444444
Q ss_pred CCcccccc-----CcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCC---CCCCcccccCcEEecc
Q 037111 356 KNQLIGNI-----SDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGI---PPEIGNATQLHELDFS 427 (964)
Q Consensus 356 ~N~l~~~~-----~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~---~~~~~~l~~L~~L~Ls 427 (964)
++.+.... +..+...++|+.|++++|++.......+..+++|++|++++|.+++.. +..+..+++|++|+|+
T Consensus 290 ~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls 369 (549)
T 2z81_A 290 RLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLS 369 (549)
T ss_dssp SCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECT
T ss_pred ccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEcc
Confidence 44433211 111233456777777777765433333346777777777777776544 2346778888888888
Q ss_pred CCcccccCC--ccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCc
Q 037111 428 SNHLVGKVP--LELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ 505 (964)
Q Consensus 428 ~N~l~~~~~--~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 505 (964)
+|++++..+ ..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+++. +|..+ .++|++|+|++|+|++
T Consensus 370 ~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~ 445 (549)
T 2z81_A 370 QNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDS 445 (549)
T ss_dssp TSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSC
T ss_pred CCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhh
Confidence 888875432 45788888999999999888 677788888899999999999874 44433 2589999999999986
Q ss_pred cchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCC
Q 037111 506 EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 506 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
.. ..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|+|++.+|..|..+++|+.|++++|++.|.+|.
T Consensus 446 ~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 446 FS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred hc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 43 57899999999999998 6665 56789999999999999999999999999999999999999998874
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-52 Score=503.57 Aligned_cols=441 Identities=22% Similarity=0.309 Sum_probs=333.8
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeeecccCCc------cC------cCCcccCCCCcccEEEccccccCCcccc-
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHF------SG------KIPSEIGLLTNLEVLHMFVNHLNGSIPE- 150 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l------~~------~~p~~~~~l~~L~~L~l~~n~l~~~~~~- 150 (964)
.+++.|+|++|+++|.+|++|++|++|++|+|++|.+ .| .+|... +..|+ ++++.|.+.+.+|.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4789999999999999999999999999999999987 33 455554 67788 89999999887774
Q ss_pred cCC-C------------------CCCCEEEcC--CCCCCCCCCCCCCCCCCCcEEEEecCCCCCC---------------
Q 037111 151 IGH-L------------------SSLKNLALD--GNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS--------------- 194 (964)
Q Consensus 151 ~~~-l------------------~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--------------- 194 (964)
++. + ..++.+.+. +|+++| +|..++++++|++|+|++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~ 236 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQ 236 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHH
T ss_pred HHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhc
Confidence 331 1 122222222 578887 888899999999999999999875
Q ss_pred --CCcccc--CCCCcchhhcccccccCCccccccCccccceeeccccc-cCC-CChhhhhcc------cccceeeccccc
Q 037111 195 --IPSSIG--NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ-LSG-SIPQEIGNL------KLLTDLSLSQNQ 262 (964)
Q Consensus 195 --~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~ 262 (964)
+|..++ ++++|++|+|++|++.+.+|..|+.+++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+
T Consensus 237 ~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~ 316 (636)
T 4eco_A 237 QYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316 (636)
T ss_dssp HHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred ccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc
Confidence 888888 88888888888888888888888888888888888887 887 788888776 888888888888
Q ss_pred cccccCC--cccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCc-ceEEEeecccccccc
Q 037111 263 LRGTVPS--SLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS-LQYFSVHDNYFIGSL 339 (964)
Q Consensus 263 l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~-L~~L~l~~n~l~~~~ 339 (964)
++ .+|. .+..+++|++|++++|+++|.+| .++.+++|+.|++++|+++ .+|..+..+++ |++|++++|.+. .+
T Consensus 317 l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~l 392 (636)
T 4eco_A 317 LK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YI 392 (636)
T ss_dssp CS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SC
T ss_pred CC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-cc
Confidence 88 7777 78888888888888888887777 7788888888888888777 44555555555 555555555554 34
Q ss_pred cccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCcccc-------CCCccceEeecccccCCCCC
Q 037111 340 PKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW-------NCPQLGILKIAGNNITGGIP 412 (964)
Q Consensus 340 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~-------~~~~L~~L~L~~n~i~~~~~ 412 (964)
|..+..++ +++|+.|++++|++++..+..+. .+++|+.|+|++|.++...+
T Consensus 393 p~~~~~~~----------------------l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~ 450 (636)
T 4eco_A 393 PNIFDAKS----------------------VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPK 450 (636)
T ss_dssp CSCCCTTC----------------------SSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCT
T ss_pred chhhhhcc----------------------cCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCH
Confidence 44443322 22455555555555555444444 55566677777777664433
Q ss_pred CCCcccccCcEEeccCCcccccCCcc-cccc-------CCcceeecccccccCCCchhhh--ccCCCCceecccCccccc
Q 037111 413 PEIGNATQLHELDFSSNHLVGKVPLE-LANL-------TSLNDLILNGNQLSGGIPPELG--LLTDLGYLDLSANRFSKS 482 (964)
Q Consensus 413 ~~~~~l~~L~~L~Ls~N~l~~~~~~~-l~~l-------~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~ 482 (964)
..+..+++|++|+|++|+++ .+|.. +... ++|+.|+|++|+++ .+|..+. .+++|++|+|++|++++
T Consensus 451 ~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~- 527 (636)
T 4eco_A 451 ELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK- 527 (636)
T ss_dssp HHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-
T ss_pred HHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-
Confidence 34556788888888888888 44443 3333 39999999999999 7888887 99999999999999997
Q ss_pred cCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCccccccccc
Q 037111 483 IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENM 562 (964)
Q Consensus 483 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 562 (964)
+|..+..+++|++|+|++|+ ++++|++.+.+|..+.++++|+.|+|++|+| +.+|..+.
T Consensus 528 ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-- 586 (636)
T 4eco_A 528 FPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-- 586 (636)
T ss_dssp CCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--
T ss_pred cChhhhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--
Confidence 88899999999999998876 5677777777777777777888888888877 46666655
Q ss_pred ccceEEEecCCccccc
Q 037111 563 HGLLSIDISYNELDGP 578 (964)
Q Consensus 563 ~~L~~l~ls~N~l~~~ 578 (964)
++|+.||+++|++...
T Consensus 587 ~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 587 PNISVLDIKDNPNISI 602 (636)
T ss_dssp TTCCEEECCSCTTCEE
T ss_pred CcCCEEECcCCCCccc
Confidence 6788888888877653
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-50 Score=479.93 Aligned_cols=502 Identities=22% Similarity=0.203 Sum_probs=432.6
Q ss_pred EeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCC
Q 037111 89 LDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHL 167 (964)
Q Consensus 89 L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l 167 (964)
++-++.+++ .+|..+. +++++|+|++|.+++..+..|+.+++|++|+|++|++++..+. ++.+++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 444455666 5777553 5799999999999988888999999999999999999988775 89999999999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccC-CccccccCccccceeeccccccCCCChhh
Q 037111 168 DGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQE 246 (964)
Q Consensus 168 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 246 (964)
++..|..|+++++|++|++++|++++..+..++++++|++|+|++|.+++ .+|..|+.+++|++|++++|++++..|..
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 168 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG
T ss_pred CccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHH
Confidence 98888999999999999999999997666679999999999999999997 46999999999999999999999888889
Q ss_pred hhccccc----ceeeccccccccccCCcccCccccceeecccccccc-cCCcccccCccccEEEeeCccCc------ccC
Q 037111 247 IGNLKLL----TDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG-HIPQEIGNFMNLNSLSVGGNQFT------GFL 315 (964)
Q Consensus 247 ~~~l~~L----~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~------~~~ 315 (964)
++.+++| +.|++++|.+++..|..+... +|+.|++++|.... .++..+..+.+++.+.+..+.+. ...
T Consensus 169 ~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 247 (570)
T 2z63_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247 (570)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECC
T ss_pred ccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcc
Confidence 9999999 899999999998888877766 89999999986542 34566778888887776544332 222
Q ss_pred CcccccCC--cceEEEeecc-cccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCcccc
Q 037111 316 PQNICQSG--SLQYFSVHDN-YFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW 392 (964)
Q Consensus 316 p~~~~~~~--~L~~L~l~~n-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 392 (964)
...+..+. .++.++++++ .+.+..|..+..+++|+.|++++|.+++ .+..+..+ +|+.|++++|++..... .
T Consensus 248 ~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~~l~~---~ 322 (570)
T 2z63_A 248 KSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFGQFPT---L 322 (570)
T ss_dssp TTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCSSCCB---C
T ss_pred hhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCcccccCc---c
Confidence 23333332 4778888888 7888899999999999999999999986 45556667 99999999999984433 4
Q ss_pred CCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccC--CccccccCCcceeecccccccCCCchhhhccCCCC
Q 037111 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKV--PLELANLTSLNDLILNGNQLSGGIPPELGLLTDLG 470 (964)
Q Consensus 393 ~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 470 (964)
.+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. +..+..+++|++|++++|.+++..+. +..+++|+
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~ 399 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLE 399 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCC
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCC
Confidence 789999999999998866555 78899999999999998654 67888999999999999999965544 99999999
Q ss_pred ceecccCccccccC-CCcccccccceecCCccccCccchhhhhccccCCeecccCcccc-CCCChhcccccccceeeccC
Q 037111 471 YLDLSANRFSKSIP-GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLR-GEIPPEICNLESLEKLNLSH 548 (964)
Q Consensus 471 ~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~ 548 (964)
+|++++|.+++..+ ..+..+++|++|++++|++++..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++
T Consensus 400 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~ 479 (570)
T 2z63_A 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479 (570)
T ss_dssp EEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCC
Confidence 99999999998766 57899999999999999999999999999999999999999998 57899999999999999999
Q ss_pred CcCCCcccccccccccceEEEecCCcccccCCCC-ccCCCCCcccccCCCCccCC
Q 037111 549 NNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI-EAFRHAPVEALQGNKGLCGE 602 (964)
Q Consensus 549 N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~ 602 (964)
|++++..|..|..+++|+.|++++|++++.+|.. ..++.+....+.+|++.|+.
T Consensus 480 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 9999998999999999999999999999987753 45566777789999998863
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-51 Score=437.87 Aligned_cols=257 Identities=25% Similarity=0.410 Sum_probs=206.3
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++++..+.||+|+||+||+|+++ ..||||+++.........+.|.+|+.++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 356788899999999999999875 369999997655566667889999999999999999999999865 56899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS- 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 846 (964)
||+||+|.++++... .++++.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+......
T Consensus 112 y~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred cCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 999999999997543 4599999999999999999999999 99999999999999999999999999998765432
Q ss_pred -CCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 847 -SNWSELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 847 -~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.......||+.|||||++.+ +.|+.++|||||||++|||+||+.||.... ....+...+......
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-----------~~~~~~~~~~~~~~~ 256 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-----------NRDQIIFMVGRGYAS 256 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----------CHHHHHHHHHTTCCC
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-----------hHHHHHHHHhcCCCC
Confidence 23345689999999999864 458999999999999999999999985322 122223332222222
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.......+++..+.+++.+||+.||++||||+||++.|+
T Consensus 257 p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 257 PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred CCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2122233456677889999999999999999999998774
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-51 Score=441.60 Aligned_cols=255 Identities=21% Similarity=0.360 Sum_probs=213.3
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+++..+.||+|+||+||+|++. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+++..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 45677889999999999999863 46789999997533 344457899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC
Q 037111 763 FLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE 828 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~ 828 (964)
++|||||++|+|.+++.... ...++|.++.+|+.|||+||+|||++ +||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCC
Confidence 99999999999999996532 23589999999999999999999999 99999999999999999
Q ss_pred CceEEeccCcccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCC
Q 037111 829 YEAHVSDFGTAKLLKPDS--SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPG 905 (964)
Q Consensus 829 ~~~kl~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~ 905 (964)
+.+||+|||+|+...... .......||+.|||||++.++.|+.++|||||||++|||+| |+.||..
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~----------- 250 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG----------- 250 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-----------
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC-----------
Confidence 999999999998765432 22345679999999999999999999999999999999998 8999752
Q ss_pred CChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+....+..+..++. +.+++..+.+++.+||+.||++||||+||++.|++
T Consensus 251 ~~~~~~~~~i~~~~~~~~-----p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 251 YSNQDVVEMIRNRQVLPC-----PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp CCHHHHHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCCC-----cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 233445555544443322 23456678899999999999999999999999975
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-51 Score=446.66 Aligned_cols=253 Identities=20% Similarity=0.357 Sum_probs=214.2
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
+++|++.+.||+|+||+||+|+. .+|+.||||++..........+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 46899999999999999999976 47999999999765555566778999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
|||+||+|.+++.......+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 999999999999877767789999999999999999999999 99999999999999999999999999998765433
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||.. ....+.+..+.....++.+
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~-----------~~~~~~~~~i~~~~~~~~~-- 246 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-----------GSMKNLVLKIISGSFPPVS-- 246 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC-----------SSHHHHHHHHHHTCCCCCC--
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----------cCHHHHHHHHHcCCCCCCC--
Confidence 333456799999999999999999999999999999999999999852 3344566666666555332
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.++.+++.+||.+||++|||++|+++
T Consensus 247 ---~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 ---LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 223456788899999999999999999975
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-51 Score=439.32 Aligned_cols=253 Identities=27% Similarity=0.458 Sum_probs=212.2
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
++|.+.+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 46888899999999999999764 4678999999743 344567899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCce
Q 037111 763 FLVYEYLERGSLARILSSET-----------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA 831 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~ 831 (964)
++|||||++|+|.++++... ...++|.++.+++.||++||+|||++ +||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997532 35699999999999999999999999 99999999999999999999
Q ss_pred EEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCCh
Q 037111 832 HVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~ 908 (964)
||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||.. ...
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~-----------~~~ 236 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ-----------LSN 236 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-----------SCH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC-----------CCH
Confidence 99999999876544322 123468999999999999999999999999999999998 8999753 233
Q ss_pred hHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.+..+..+..++. +..++.++.+++.+||+.||++|||+++|++.|+
T Consensus 237 ~~~~~~i~~~~~~~~-----p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 237 NEVIECITQGRVLQR-----PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHHHHHTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCC-----CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 455555555443322 1235567889999999999999999999999886
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-50 Score=439.30 Aligned_cols=253 Identities=26% Similarity=0.437 Sum_probs=205.5
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
++|...+.||+|+||+||+|+++ +++.||||+++. ......++|.+|++++++++|||||+++|+|.+++..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 46778889999999999999864 477899999974 3445567899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 763 FLVYEYLERGSLARILSSET-------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
|+|||||++|+|.++++... ..+++|.++.+|+.||++||+|||+. +||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 99999999999999997542 24589999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCC
Q 037111 830 EAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGA 906 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~ 906 (964)
.+||+|||+|+....... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.. .
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~-----------~ 264 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ-----------L 264 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS-----------S
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC-----------C
Confidence 999999999987654432 2234679999999999999999999999999999999999 8999753 2
Q ss_pred ChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 907 NMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+.+..+..+..++. +..++.++.+++.+||+.||++||||+||++.|+
T Consensus 265 ~~~~~~~~i~~g~~~~~-----p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 265 SNTEAIDCITQGRELER-----PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp CHHHHHHHHHHTCCCCC-----CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCC-----cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 23344555444332221 1234567889999999999999999999999886
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-50 Score=473.65 Aligned_cols=456 Identities=24% Similarity=0.261 Sum_probs=309.2
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCccc-ccCCCCCCCEEEcCCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNH 166 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~L~~n~ 166 (964)
+||+++|+++ .+|..+. ++|++|+|++|.+++..|..|+.+++|++|+|++|++++..| .++.+++|++|+|++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 5666666666 3555554 666666666666665555566666666666666666666554 36666666666666666
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCC-CCCccccCCCCcchhhcccccccCCccccccCcccc--ceeecccccc--CC
Q 037111 167 LDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKL--TKLELSNNQL--SG 241 (964)
Q Consensus 167 l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~ 241 (964)
++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|.+++ ..+..+++| ++|++++|.+ .+
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 66 34444 56666666666666665 356666666667777777666664 345555555 7777777777 66
Q ss_pred CChhhhhccc-ccceeeccccccccccCC-cccCccccceeeccccc-------ccccCCcccccCccccEEEeeCccCc
Q 037111 242 SIPQEIGNLK-LLTDLSLSQNQLRGTVPS-SLSNLSSLEILHLYDNQ-------LSGHIPQEIGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 242 ~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~l~~N~l~ 312 (964)
..|..+..+. ....+++++|++.+.++. .+..+++|+.|++++|. +.+.+| .++.+++|+.|++++|.++
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEE
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccC
Confidence 6666666554 334556777776654443 46667777777777776 555554 6677777777777777766
Q ss_pred ccCCcccc---cCCcceEEEeecccccccccccc-----cCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeec
Q 037111 313 GFLPQNIC---QSGSLQYFSVHDNYFIGSLPKTL-----RNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFY 384 (964)
Q Consensus 313 ~~~p~~~~---~~~~L~~L~l~~n~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 384 (964)
+..+..+. ..++|++|++++|.+.+.+|..+ .++++|+.+++++|.+ ..+...+..+
T Consensus 234 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~-------------- 298 (520)
T 2z7x_B 234 WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEI-------------- 298 (520)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHH--------------
T ss_pred HHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcc--------------
Confidence 43222111 12355566666665555555554 4444444444444444 1111111111
Q ss_pred cccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccC--CCchh
Q 037111 385 GELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSG--GIPPE 462 (964)
Q Consensus 385 ~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~~~~ 462 (964)
....+|+.|++++|.+.... .+..+++|++|++++|++++..|..++.+++|++|+|++|++++ .+|..
T Consensus 299 -------~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 369 (520)
T 2z7x_B 299 -------FSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEM 369 (520)
T ss_dssp -------HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHH
T ss_pred -------cccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHH
Confidence 01134555555555544321 12567788888888888888788888888888899998888886 55677
Q ss_pred hhccCCCCceecccCccccccC-CCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhccccccc
Q 037111 463 LGLLTDLGYLDLSANRFSKSIP-GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESL 541 (964)
Q Consensus 463 ~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 541 (964)
+..+++|++|+|++|++++.+| ..+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|
T Consensus 370 ~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L 446 (520)
T 2z7x_B 370 TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEAL 446 (520)
T ss_dssp HTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTC
T ss_pred HhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCC
Confidence 8889999999999999987444 4588899999999999999887777665 79999999999998 788888899999
Q ss_pred ceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 542 EKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 542 ~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
+.|+|++|+|++..+..|..+++|+.|++++|+++|.++
T Consensus 447 ~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 447 QELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 999999999995444459999999999999999998765
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-49 Score=475.60 Aligned_cols=530 Identities=20% Similarity=0.199 Sum_probs=409.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCC
Q 037111 28 NSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNL 107 (964)
Q Consensus 28 ~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l 107 (964)
...+++|... -+..|....|...++. .+.++.++ ..+|-+..+++++|||++|+|++..|.+|.++
T Consensus 10 ~~~~~~~~~~--------~p~~~~~c~~~~~~~~--~~c~~~~l----~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l 75 (635)
T 4g8a_A 10 DDKLAAANSS--------IPESWEPCVEVVPNIT--YQCMELNF----YKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSF 75 (635)
T ss_dssp -----------------------CCSEEEETTTE--EECTTSCC----SSCCSSSCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred cchhhcccCC--------CCCCCCCccccCCCCE--EECCCCCc----CccCCCCCcCCCEEEeeCCCCCCCCHHHHhCC
Confidence 3457777642 2233544444322221 23334443 46677777899999999999998878899999
Q ss_pred CCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEE
Q 037111 108 TKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYL 186 (964)
Q Consensus 108 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 186 (964)
++|++|+|++|+|++..|.+|++|++|++|+|++|++++.++. |..+++|++|+|++|++++..+..|+++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 9999999999999977778899999999999999999988875 899999999999999999888888999999999999
Q ss_pred ecCCCCC-CCCccccCCCCcchhhcccccccCCccccccCccccc----eeeccccccCCCChhhhhcccccceeecccc
Q 037111 187 YNNSLPG-SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT----KLELSNNQLSGSIPQEIGNLKLLTDLSLSQN 261 (964)
Q Consensus 187 ~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 261 (964)
++|++++ .+|..++++++|++|+|++|++++..+..|..+.+++ .++++.|.++...+..+ ....++.+++++|
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n 234 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNN 234 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESC
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcc
Confidence 9999986 4688899999999999999999999898888777654 67889999885544443 3345667777777
Q ss_pred ccccc-cCCcccCccccceee------------------------------ccccccc---ccCCcccccCccccEEEee
Q 037111 262 QLRGT-VPSSLSNLSSLEILH------------------------------LYDNQLS---GHIPQEIGNFMNLNSLSVG 307 (964)
Q Consensus 262 ~l~~~-~p~~l~~l~~L~~L~------------------------------L~~N~l~---~~~~~~~~~l~~L~~L~l~ 307 (964)
..... .+..+..+..++... +..+... ...+..+..+.+++.+.+.
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence 54421 122233333333333 3222221 1223345556677778888
Q ss_pred CccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccc-
Q 037111 308 GNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGE- 386 (964)
Q Consensus 308 ~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~- 386 (964)
+|.+.... .+.....++.|++.+|.+.+..+. .+..|+.+++..|.+.... .+..+++|+.|++++|.+...
T Consensus 315 ~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~ 387 (635)
T 4g8a_A 315 SVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKG 387 (635)
T ss_dssp SCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEE
T ss_pred cccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc--ccccccccccchhhcccccccc
Confidence 77776543 345567788888888887665443 3566778888888765533 345688999999999988643
Q ss_pred -cCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCC-ccccccCCcceeecccccccCCCchhhh
Q 037111 387 -LSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVP-LELANLTSLNDLILNGNQLSGGIPPELG 464 (964)
Q Consensus 387 -~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 464 (964)
.+..+..+.+|+.|++..|.+.. .+..+..+++|+.++++.|......+ ..+..+++++.+++++|.+.+..+..+.
T Consensus 388 ~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~ 466 (635)
T 4g8a_A 388 CCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 466 (635)
T ss_dssp ECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred ccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccc
Confidence 34556678899999999988774 45667889999999999988765544 4578899999999999999988899999
Q ss_pred ccCCCCceecccCcc-ccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccce
Q 037111 465 LLTDLGYLDLSANRF-SKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEK 543 (964)
Q Consensus 465 ~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 543 (964)
.+++|+.|+|++|.+ .+..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|.++++|+.
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 999999999999985 4467888999999999999999999989999999999999999999999888889999999999
Q ss_pred eeccCCcCCCccccccccc-ccceEEEecCCcccccCC
Q 037111 544 LNLSHNNLSGSIPTNFENM-HGLLSIDISYNELDGPIP 580 (964)
Q Consensus 544 L~Ls~N~l~~~~~~~~~~l-~~L~~l~ls~N~l~~~~~ 580 (964)
|+|++|+|++..|..|..+ ++|+.|+|++|+|+|...
T Consensus 547 L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp EECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred EECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999999999999988 689999999999998764
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-50 Score=488.57 Aligned_cols=465 Identities=18% Similarity=0.217 Sum_probs=393.3
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeeec-ccCCccCcCCcccCCC----Cccc--EEEc----------cccccCC
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNL-SSNHFSGKIPSEIGLL----TNLE--VLHM----------FVNHLNG 146 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~~~~l----~~L~--~L~l----------~~n~l~~ 146 (964)
.+++.|+|++|+++|.+|++|++|++|++|+| ++|.++|..|-..... ..++ .+.+ ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 47999999999999999999999999999999 9999988755432111 0000 0000 0001111
Q ss_pred c-----------cc-ccCCCCCCCEEEcCC--CCCCCCCCCCCCCCCCCcEEEEecCCCCC-----------------CC
Q 037111 147 S-----------IP-EIGHLSSLKNLALDG--NHLDGPIPVSIGNLSSLVGLYLYNNSLPG-----------------SI 195 (964)
Q Consensus 147 ~-----------~~-~~~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 195 (964)
. .+ .......++.+.+.. |++++ +|..++++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0 01 012233455555554 89998 89999999999999999999998 38
Q ss_pred Ccccc--CCCCcchhhcccccccCCccccccCccccceeeccccc-cCC-CChhhhhccc-------ccceeeccccccc
Q 037111 196 PSSIG--NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ-LSG-SIPQEIGNLK-------LLTDLSLSQNQLR 264 (964)
Q Consensus 196 p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~ 264 (964)
|..++ ++++|++|+|++|++.+.+|..|+.+++|++|+|++|+ +++ .+|..++.++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99988 99999999999999999999999999999999999998 998 8999888887 9999999999999
Q ss_pred cccCC--cccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCc-ceEEEeecccccccccc
Q 037111 265 GTVPS--SLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS-LQYFSVHDNYFIGSLPK 341 (964)
Q Consensus 265 ~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~-L~~L~l~~n~l~~~~p~ 341 (964)
.+|. .+.++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |+.|++++|.+. .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 8898 8999999999999999999 888 8999999999999999999 78888999998 999999999998 7788
Q ss_pred cccCCCc--CCeeecCCCccccccCccc---C--CCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCC
Q 037111 342 TLRNCTS--LERVRLEKNQLIGNISDDF---G--IYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPE 414 (964)
Q Consensus 342 ~l~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~ 414 (964)
.+..++. |+.|+|++|++++..+... . ..++|+.|+|++|+++......+..+++|+.|+|++|.|+...+..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~ 716 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENS 716 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTS
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHH
Confidence 8877765 9999999999988665432 2 3458999999999999655555568999999999999999443333
Q ss_pred Ccc-------cccCcEEeccCCcccccCCcccc--ccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCC
Q 037111 415 IGN-------ATQLHELDFSSNHLVGKVPLELA--NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPG 485 (964)
Q Consensus 415 ~~~-------l~~L~~L~Ls~N~l~~~~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 485 (964)
+.. +++|++|+|++|+|+ .+|..+. .+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------- 787 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------- 787 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-------
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-------
Confidence 332 349999999999998 7888887 99999999999999997 78889999999999999997
Q ss_pred CcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccc
Q 037111 486 NMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGL 565 (964)
Q Consensus 486 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 565 (964)
++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|+|++|+|....+..|.....+
T Consensus 788 -----------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~ 853 (876)
T 4ecn_A 788 -----------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEA 853 (876)
T ss_dssp -----------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHT
T ss_pred -----------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccc
Confidence 7889999999999999999999999999999 58888876 699999999999998888888888888
Q ss_pred eEEEecCCcccc
Q 037111 566 LSIDISYNELDG 577 (964)
Q Consensus 566 ~~l~ls~N~l~~ 577 (964)
..+.|++|++..
T Consensus 854 ~~~~L~~n~~~~ 865 (876)
T 4ecn_A 854 GMYVLLYDKTQD 865 (876)
T ss_dssp TCCEEECCTTSE
T ss_pred hheeecCCCccc
Confidence 889999998765
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-49 Score=467.92 Aligned_cols=480 Identities=24% Similarity=0.239 Sum_probs=351.2
Q ss_pred eEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCC
Q 037111 87 SYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGN 165 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n 165 (964)
...|.+++.++ .+|+.+. ++|++|+|++|.+++..|..|+.+++|++|+|++|++++.+|. ++.+++|++|+|++|
T Consensus 8 ~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 84 (549)
T 2z81_A 8 GVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84 (549)
T ss_dssp SEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred ceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCC
Confidence 34677788887 5676554 6788888888888877777788888888888888877776653 777777777777777
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCC-CCCccccCCCCcchhhcccccc-cCCccccccCccccceeeccccccCCCC
Q 037111 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKNHL-RGPIPSSFGYLRKLTKLELSNNQLSGSI 243 (964)
Q Consensus 166 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 243 (964)
++++..|..|+++++|++|+|++|++++ ..|..++++++|++|++++|.+ ....+..|..+++|++|++++|++++..
T Consensus 85 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 164 (549)
T 2z81_A 85 HLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQ 164 (549)
T ss_dssp CCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEEC
T ss_pred ccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccC
Confidence 7776666667777777777777777775 3456677777777777777763 3333356666777777777777776666
Q ss_pred hhhhhcccccceeeccccccccccCCc-ccCccccceeecccccccccC--C-cccccCccccEEEeeCccCcccCCccc
Q 037111 244 PQEIGNLKLLTDLSLSQNQLRGTVPSS-LSNLSSLEILHLYDNQLSGHI--P-QEIGNFMNLNSLSVGGNQFTGFLPQNI 319 (964)
Q Consensus 244 p~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~--~-~~~~~l~~L~~L~l~~N~l~~~~p~~~ 319 (964)
|..++.+++|++|+++.|.+. .+|.. +..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+.
T Consensus 165 ~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-- 241 (549)
T 2z81_A 165 SQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN-- 241 (549)
T ss_dssp TTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH--
T ss_pred hhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH--
Confidence 666666666777777666665 23332 234566666666666666421 1 1123345555555555555443222
Q ss_pred ccCCcceEEEeecccccccccccccCCCcCCeeecCCCcccccc------CcccCCCCCCcEEEccCCeecccc-----C
Q 037111 320 CQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNI------SDDFGIYPNLKLFDLSYNKFYGEL-----S 388 (964)
Q Consensus 320 ~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~------~~~~~~l~~L~~L~Ls~N~i~~~~-----~ 388 (964)
.++..+..+++|+.+++++|.+.+.. ...+..+++|+.|+++++.+.... +
T Consensus 242 ------------------~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~ 303 (549)
T 2z81_A 242 ------------------ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLS 303 (549)
T ss_dssp ------------------HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCC
T ss_pred ------------------HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccch
Confidence 12233455666777777777665532 234567889999999999876432 1
Q ss_pred ccccCCCccceEeecccccCCCCCCCC-cccccCcEEeccCCcccccCC---ccccccCCcceeecccccccCCCc--hh
Q 037111 389 SNWWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVP---LELANLTSLNDLILNGNQLSGGIP--PE 462 (964)
Q Consensus 389 ~~~~~~~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~---~~l~~l~~L~~L~L~~N~l~~~~~--~~ 462 (964)
..+...++|+.|++++|.++ .+|..+ ..+++|++|+|++|++++..| ..++.+++|++|+|++|++++..+ ..
T Consensus 304 ~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 382 (549)
T 2z81_A 304 TVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEI 382 (549)
T ss_dssp HHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHH
T ss_pred hhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhh
Confidence 11234578999999999998 555555 579999999999999987664 447889999999999999986543 56
Q ss_pred hhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccc
Q 037111 463 LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLE 542 (964)
Q Consensus 463 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 542 (964)
+..+++|++|+|++|+++ .+|..+..+++|++|++++|+|++ +|..+ .++|+.|+|++|+|++.+ ..+++|+
T Consensus 383 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~ 454 (549)
T 2z81_A 383 LLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQ 454 (549)
T ss_dssp GGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCC
T ss_pred hhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhc
Confidence 889999999999999998 678889999999999999999974 44433 268999999999999643 5789999
Q ss_pred eeeccCCcCCCcccccccccccceEEEecCCcccccCCC-CccCCCCCcccccCCCCccC
Q 037111 543 KLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPS-IEAFRHAPVEALQGNKGLCG 601 (964)
Q Consensus 543 ~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~ 601 (964)
+|+|++|+|+ .+|. ...+++|+.|||++|++++.+|. ...++.+....+.+|++.|+
T Consensus 455 ~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 455 ELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp EEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred EEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 9999999999 5665 56899999999999999998876 35667777888999999885
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-49 Score=427.65 Aligned_cols=249 Identities=25% Similarity=0.385 Sum_probs=211.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
..|+..+.||+|+||+||+|+.+ +|+.||||++..... ...+.+.+|+.++++++|||||+++++|.+++..|+|||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 46999999999999999999765 799999999964332 233568899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||+||+|.+++... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.......
T Consensus 152 y~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 152 FLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp CCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 99999999999653 489999999999999999999999 999999999999999999999999999998776666
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.. ....+.+..+.....+.. .
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-----------~~~~~~~~~i~~~~~~~~---~ 291 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-----------EPPLKAMKMIRDNLPPRL---K 291 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-----------SCHHHHHHHHHHSSCCCC---S
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----------cCHHHHHHHHHcCCCCCC---C
Confidence 66678999999999999999999999999999999999999999853 222334444433322211 1
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......++.+++.+||.+||++|||++|+++
T Consensus 292 ~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 292 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 12234456788889999999999999999875
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-49 Score=422.84 Aligned_cols=247 Identities=21% Similarity=0.342 Sum_probs=211.5
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||+||+|+. .+|+.||||++.+.. ......+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999965 479999999996432 22334577999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++||+|.+++...+ .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999997654 489999999999999999999999 99999999999999999999999999999876443
Q ss_pred --CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 847 --SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 847 --~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||.. ....+....+....+..+
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-----------~~~~~~~~~i~~~~~~~p- 254 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-----------GNEGLIFAKIIKLEYDFP- 254 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCCC-
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHcCCCCCC-
Confidence 334567899999999999999999999999999999999999999852 233455666655554322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIV 957 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ev 957 (964)
.....++.+++.+||.+||++|||++|+
T Consensus 255 -----~~~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 255 -----EKFFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp -----TTCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred -----cccCHHHHHHHHHHccCCHhHCcChHHH
Confidence 1223457788889999999999999886
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-48 Score=412.29 Aligned_cols=246 Identities=24% Similarity=0.386 Sum_probs=201.7
Q ss_pred cccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec----CceeEEEE
Q 037111 692 DESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH----ARHSFLVY 766 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 766 (964)
+..+.||+|+||+||+|.++ +++.||||++..........+.|.+|+.++++++|||||+++++|.+ +..+|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999764 68899999997665556666789999999999999999999999865 35689999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEECC-CCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLDF-EYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~ 843 (964)
|||+||+|.+++.+.. .+++..+..++.||+.||+|||++ + ||||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999997653 489999999999999999999998 6 999999999999984 7999999999998643
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.... ........+.....++.
T Consensus 184 ~--~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~----------~~~~~~~~i~~~~~~~~ 250 (290)
T 3fpq_A 184 A--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----------NAAQIYRRVTSGVKPAS 250 (290)
T ss_dssp T--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----------SHHHHHHHHTTTCCCGG
T ss_pred C--CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC----------cHHHHHHHHHcCCCCCC
Confidence 3 33456789999999998865 69999999999999999999999985221 12233334433333322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. . ...+.++.+++.+||.+||++|||++|+++
T Consensus 251 ~-~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 F-D---KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G-G---GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C-C---ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 1 122345778889999999999999999986
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-49 Score=423.81 Aligned_cols=248 Identities=25% Similarity=0.315 Sum_probs=203.2
Q ss_pred hcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|++.+.||+|+||+||+|+.. +++.||||++............+.+|+.++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 47999999999999999999752 47789999997543333334568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|||||+||+|.+++.... .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999997654 489999999999999999999999 999999999999999999999999999987665
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
........+||+.|||||++.+..|+.++||||+||++|||+||+.||.. ....+....+.....+.+
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~-----------~~~~~~~~~i~~~~~~~p- 246 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG-----------KDRKETMTMILKAKLGMP- 246 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC-
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC-----------cCHHHHHHHHHcCCCCCC-
Confidence 55555677899999999999999999999999999999999999999852 233455666655554432
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCH-----HHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNM-----QIVC 958 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~-----~evl 958 (964)
...+.++.+++.+||.+||++|||+ +|++
T Consensus 247 -----~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil 280 (304)
T 3ubd_A 247 -----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIK 280 (304)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHH
T ss_pred -----CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHH
Confidence 1234557788899999999999985 5665
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=459.17 Aligned_cols=452 Identities=21% Similarity=0.218 Sum_probs=372.4
Q ss_pred EEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEcccc
Q 037111 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVN 142 (964)
Q Consensus 63 ~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n 142 (964)
.+++++++++. +|...+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 4 ~l~ls~n~l~~----ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 4 LVDRSKNGLIH----VPKDLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp EEECTTSCCSS----CCCSCCTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred eEecCCCCccc----ccccccccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57888888873 44445589999999999999888889999999999999999999888999999999999999999
Q ss_pred ccCCcccccCCCCCCCEEEcCCCCCCC-CCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCc--chhhcccccc--cC
Q 037111 143 HLNGSIPEIGHLSSLKNLALDGNHLDG-PIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL--VYLFLKKNHL--RG 217 (964)
Q Consensus 143 ~l~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~ 217 (964)
++++. |.. .+++|++|+|++|++++ .+|..++++++|++|++++|++++ ..+..+++| ++|++++|.+ ++
T Consensus 80 ~l~~l-p~~-~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 80 KLVKI-SCH-PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CCCEE-ECC-CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ceeec-Ccc-ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 99954 444 89999999999999997 578999999999999999999986 467778888 9999999999 88
Q ss_pred CccccccCcc-ccceeeccccccCCCChh-hhhcccccceeeccccc-------cccccCCcccCccccceeeccccccc
Q 037111 218 PIPSSFGYLR-KLTKLELSNNQLSGSIPQ-EIGNLKLLTDLSLSQNQ-------LRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 218 ~~~~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
..|..+..+. +...+++++|.+.+.++. .+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.++
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEE
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccC
Confidence 8888888876 456788999998876554 67789999999999998 777776 7899999999999999988
Q ss_pred ccCCcccc---cCccccEEEeeCccCcccCCccc-----ccCCcceEEEeeccccccccc-ccccCC---CcCCeeecCC
Q 037111 289 GHIPQEIG---NFMNLNSLSVGGNQFTGFLPQNI-----CQSGSLQYFSVHDNYFIGSLP-KTLRNC---TSLERVRLEK 356 (964)
Q Consensus 289 ~~~~~~~~---~l~~L~~L~l~~N~l~~~~p~~~-----~~~~~L~~L~l~~n~l~~~~p-~~l~~l---~~L~~L~L~~ 356 (964)
+..+..+. ..++|+.|++++|++++.+|..+ ..++.|+.+++++|.+ .+| ..+..+ .+|+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~ 311 (520)
T 2z7x_B 234 WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSG 311 (520)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEES
T ss_pred HHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCC
Confidence 64332221 24689999999999999999988 8899999999999998 444 444443 5577777777
Q ss_pred CccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccc--c
Q 037111 357 NQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVG--K 434 (964)
Q Consensus 357 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~--~ 434 (964)
|.+..... +. .+++|++|++++|.+++..|..+..+++|++|+|++|++++ .
T Consensus 312 n~l~~~~~--~~------------------------~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 365 (520)
T 2z7x_B 312 TRMVHMLC--PS------------------------KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSK 365 (520)
T ss_dssp SCCCCCCC--CS------------------------SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHH
T ss_pred Cccccccc--hh------------------------hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCcccc
Confidence 76654321 13 34455555555555555667777788888888888888875 4
Q ss_pred CCccccccCCcceeecccccccCCCch-hhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhc
Q 037111 435 VPLELANLTSLNDLILNGNQLSGGIPP-ELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGK 513 (964)
Q Consensus 435 ~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 513 (964)
+|..+..+++|++|+|++|.+++.+|. .+..+++|++|+|++|++++..|..+. ++|++|++++|+|+ .+|..+..
T Consensus 366 ~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~ 442 (520)
T 2z7x_B 366 IAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVK 442 (520)
T ss_dssp HHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGG
T ss_pred chHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhc
Confidence 556788888999999999998875555 477888999999999999877776664 78999999999998 67777779
Q ss_pred cccCCeecccCccccCCCChh-cccccccceeeccCCcCCCccc
Q 037111 514 LVQLSELDLSHNLLRGEIPPE-ICNLESLEKLNLSHNNLSGSIP 556 (964)
Q Consensus 514 l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~ 556 (964)
+++|+.|+|++|+|++ +|.. |..+++|+.|+|++|++++..+
T Consensus 443 l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 443 LEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 9999999999999994 5554 8999999999999999997654
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=424.23 Aligned_cols=249 Identities=23% Similarity=0.295 Sum_probs=203.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.+.|+..++||+|+||+||+|+.+ +|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 456888899999999999999764 699999999974321 236999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccCcccccCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPD 845 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~ 845 (964)
|||+||+|.++++..+ .+++..+..++.||+.||+|||++ +||||||||+|||++.++ ++||+|||+|+.....
T Consensus 130 Ey~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred eccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 9999999999997654 489999999999999999999999 999999999999999998 6999999999877544
Q ss_pred CCC-----ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 846 SSN-----WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 846 ~~~-----~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
... ....+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+....+.....
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-----------~~~~~~i~~~~~ 273 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR-----------GPLCLKIASEPP 273 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC-----------SCCHHHHHHSCC
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-----------HHHHHHHHcCCC
Confidence 221 2245799999999999999999999999999999999999999863221 122233333222
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.. .....++..+.+++.+||.+||++|||++|+++.|.
T Consensus 274 ~~~---~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 274 PIR---EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp GGG---GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cch---hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 211 112234556788899999999999999999988763
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-48 Score=409.64 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=194.6
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+++|++.+.||+|+||+||+|+.+ +|+.||||++.+.. ........+.+|+.++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 478999999999999999999764 79999999997543 2334456799999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+ +|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EeCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 9999 679999997643 499999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.. ....+....+.....+.+
T Consensus 166 ~-~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-----------~~~~~~~~~i~~~~~~~p- 232 (275)
T 3hyh_A 166 N-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----------ESIPVLFKNISNGVYTLP- 232 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCCC-
T ss_pred C-ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC-----------CCHHHHHHHHHcCCCCCC-
Confidence 2 2345689999999999998886 5799999999999999999999852 223445555555444322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....++.+++.+||++||++|||++|+++
T Consensus 233 -----~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 -----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -----CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 123345778889999999999999999986
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-48 Score=418.68 Aligned_cols=267 Identities=24% Similarity=0.321 Sum_probs=204.9
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc----eeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----HSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 764 (964)
.+|...+.||+|+||+||+|++ +|+.||||++... ......+..|+..+.+++|||||+++|+|.+++ .+|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 4577889999999999999988 4899999998642 222233445667778899999999999998653 5799
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE-----CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
|||||++|+|.++++.. +++|..+.+++.|+++||+|||++ ++++||||||||+|||++.++.+||+|||+|
T Consensus 79 V~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 99999999999999754 489999999999999999999976 2458999999999999999999999999999
Q ss_pred cccCCCCCC----ccccccccccccccccccC------CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC---C-CC
Q 037111 840 KLLKPDSSN----WSELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS---L-PG 905 (964)
Q Consensus 840 ~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~---~-~~ 905 (964)
+........ .....||+.|||||++.+. .++.++|||||||++|||+||+.||.......... . ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 876544322 2245799999999998754 36789999999999999999998876443321111 1 11
Q ss_pred CChhHHHHhhhccCCCCCcc-ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 906 ANMNEAIDHMFDARLPPPWL-EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+....+......++.. .....+++..+.+++.+||+.||++||||+||++.|+
T Consensus 236 ~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred chHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 12223333333444333221 1223467778999999999999999999999999885
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-48 Score=428.78 Aligned_cols=249 Identities=25% Similarity=0.382 Sum_probs=210.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
..|+..+.||+|+||.||+|+.+ +|+.||||++..... ...+.+.+|+.++++++|||||+++++|.+++.+|+|||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 46999999999999999999764 799999999974332 233568899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||+||+|.+++... .+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 229 y~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 229 FLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp CCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 99999999999653 389999999999999999999999 999999999999999999999999999998776666
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.. ....+.+..+.....+...
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-----------~~~~~~~~~i~~~~~~~~~--- 368 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-----------EPPLKAMKMIRDNLPPRLK--- 368 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-----------SCHHHHHHHHHHSCCCCCS---
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----------cCHHHHHHHHHcCCCCCCc---
Confidence 66678999999999999999999999999999999999999999853 2223344444333221111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......++.+++.+||..||++|||++|+++
T Consensus 369 ~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 369 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11223456778888999999999999999875
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-48 Score=424.91 Aligned_cols=261 Identities=23% Similarity=0.366 Sum_probs=210.1
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEeCC------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC-CceeeEEee
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAELPS------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH-RNIVKFYGF 755 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~ 755 (964)
+++...++|++.+.||+|+||+||+|++.. ++.||||++.... .....+.|.+|+.++++++| ||||+++|+
T Consensus 58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 344445789999999999999999997542 3579999997533 34445789999999999965 999999999
Q ss_pred eecC-ceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 037111 756 CSHA-RHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSS 820 (964)
Q Consensus 756 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp 820 (964)
|.+. +..++|||||++|+|.++++... ...+++.++..++.|||+||+|||++ +||||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCc
Confidence 9764 57899999999999999997532 23488999999999999999999999 999999999
Q ss_pred CCeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccc
Q 037111 821 KNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSS 897 (964)
Q Consensus 821 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~ 897 (964)
+|||+++++.+||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||.....
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999877554332 234578999999999999999999999999999999998 8999853221
Q ss_pred ccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 898 LSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+..+..++. +..++.++.+++.+||+.||++|||++||++.|+
T Consensus 294 ----------~~~~~~~i~~g~~~~~-----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 294 ----------DEEFCRRLKEGTRMRA-----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp ----------SHHHHHHHHHTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----------HHHHHHHHHcCCCCCC-----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1122222222221111 1224456888999999999999999999999874
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-47 Score=449.58 Aligned_cols=462 Identities=20% Similarity=0.198 Sum_probs=296.6
Q ss_pred eEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccc
Q 037111 62 ISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFV 141 (964)
Q Consensus 62 ~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~ 141 (964)
..++++++++++ +|...+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|++
T Consensus 34 ~~l~ls~~~L~~----ip~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH----VPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS----CCTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc----CCCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 567777777664 3444457788888888888876667788888888888888888877777788888888888888
Q ss_pred cccCCcccccCCCCCCCEEEcCCCCCCC-CCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCc--chhhcccccc--c
Q 037111 142 NHLNGSIPEIGHLSSLKNLALDGNHLDG-PIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL--VYLFLKKNHL--R 216 (964)
Q Consensus 142 n~l~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 216 (964)
|+++..++. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|+|++|.+ +
T Consensus 110 N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 110 NRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp SCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred CcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 887744333 67778888888887775 3456777777777777777777643 33344444 7777777777 6
Q ss_pred CCccccccCcc-ccceeeccccccCCCChh-hhhcccccceeeccccc-----cccccCCcccCccccceeecccccccc
Q 037111 217 GPIPSSFGYLR-KLTKLELSNNQLSGSIPQ-EIGNLKLLTDLSLSQNQ-----LRGTVPSSLSNLSSLEILHLYDNQLSG 289 (964)
Q Consensus 217 ~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~-----l~~~~p~~l~~l~~L~~L~L~~N~l~~ 289 (964)
+..|..|..+. ..-.+++++|.+.+.++. .+..+++|+.|++++|+ +.+. ...+..+++|+.|+++++.+++
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEECH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcCcH
Confidence 66666665543 122445566665543332 33345555555555553 1111 1123344444444444443332
Q ss_pred cCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccc-----cCCCcCCeeecCCCccccccC
Q 037111 290 HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTL-----RNCTSLERVRLEKNQLIGNIS 364 (964)
Q Consensus 290 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~~ 364 (964)
.. +.+.. .. ....+|++|++++|.+.+.+|..+ .+++.|+.+++..|.+ ..+.
T Consensus 264 ~~-------------------~~~~~-~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~ 321 (562)
T 3a79_B 264 KC-------------------SVKLF-QF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSK 321 (562)
T ss_dssp HH-------------------HHHHH-HH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCH
T ss_pred HH-------------------HHHHH-Hh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecCh
Confidence 10 00000 00 011244444444444444444433 3333333333333332 1110
Q ss_pred cccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCC
Q 037111 365 DDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTS 444 (964)
Q Consensus 365 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 444 (964)
..+.. +....+|+.|++++|.+.... ....+++|++|++++|++++..|..+..+++
T Consensus 322 ~~~~~---------------------~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 378 (562)
T 3a79_B 322 EALYS---------------------VFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKR 378 (562)
T ss_dssp HHHHH---------------------HHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSS
T ss_pred hhhhh---------------------hhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCC
Confidence 00000 001134555555555543221 1256778888888888888778888888888
Q ss_pred cceeecccccccCC--CchhhhccCCCCceecccCccccccC-CCcccccccceecCCccccCccchhhhhccccCCeec
Q 037111 445 LNDLILNGNQLSGG--IPPELGLLTDLGYLDLSANRFSKSIP-GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELD 521 (964)
Q Consensus 445 L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 521 (964)
|++|+|++|++++. +|..+..+++|++|+|++|++++.+| ..+..+++|++|++++|++++..|..+. ++|+.|+
T Consensus 379 L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~ 456 (562)
T 3a79_B 379 LQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLD 456 (562)
T ss_dssp CCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEE
T ss_pred CCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEE
Confidence 88888888888853 34667888899999999999887444 4578889999999999999877766554 7899999
Q ss_pred ccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCC
Q 037111 522 LSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 522 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
|++|+|+ .+|..+.++++|+.|+|++|+|++..+..|..+++|+.|++++|+++|.+|.
T Consensus 457 L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 457 LHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 9999998 6777777999999999999999954444489999999999999999987663
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=404.61 Aligned_cols=250 Identities=20% Similarity=0.419 Sum_probs=192.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------ 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 760 (964)
.++|++.+.||+|+||+||+|+.+ +|+.||||+++... .....+.+.+|+.++++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 457999999999999999999764 78999999987533 3444567999999999999999999999987543
Q ss_pred ------eeEEEEEeccCCCHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 761 ------HSFLVYEYLERGSLARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 761 ------~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
..|+|||||++|+|.+++..... ...++..++.++.||++||+|||++ +||||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 37999999999999999976433 2355677889999999999999999 9999999999999999999999
Q ss_pred eccCcccccCCCCCC------------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC
Q 037111 834 SDFGTAKLLKPDSSN------------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS 901 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~~------------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~ 901 (964)
+|||+|+........ ....+||+.|||||++.+..|+.++||||+||++|||++ ||....
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----- 231 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----- 231 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----
Confidence 999999876543221 234579999999999999999999999999999999996 653111
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+..+.....|+. .........+++.+||++||++|||+.|+++
T Consensus 232 -----~~~~~~~~~~~~~~p~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 -----ERVRTLTDVRNLKFPPL-----FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -----HHHHHHHHHHTTCCCHH-----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----HHHHHHHHHhcCCCCCC-----CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11123333333444322 2333445677899999999999999999986
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-45 Score=441.48 Aligned_cols=501 Identities=23% Similarity=0.212 Sum_probs=396.2
Q ss_pred EeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCC
Q 037111 89 LDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHL 167 (964)
Q Consensus 89 L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l 167 (964)
.+=++.+++ .+|+.+. +.+++|||++|+|++..|.+|+++++|++|+|++|++++.+|. |..+++|++|+|++|+|
T Consensus 36 ~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 36 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 344556777 5787652 5799999999999977778899999999999999999988875 89999999999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCC-ccccccCccccceeeccccccCCCChhh
Q 037111 168 DGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGP-IPSSFGYLRKLTKLELSNNQLSGSIPQE 246 (964)
Q Consensus 168 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 246 (964)
++..+..|+++++|++|+|++|++++..+..|+++++|++|+|++|.+++. .|..++.+++|++|+|++|++++..|..
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 987778899999999999999999987778899999999999999999864 5788999999999999999999888888
Q ss_pred hhcccccc----eeeccccccccccCCcccCccccceeecccccccc-cCCcccccCccccEEEeeCccC------cccC
Q 037111 247 IGNLKLLT----DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG-HIPQEIGNFMNLNSLSVGGNQF------TGFL 315 (964)
Q Consensus 247 ~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l------~~~~ 315 (964)
+..+.+++ .++++.|.++...+..+ ....++.+++.+|.... ..+..+..+..++...+..+.. ....
T Consensus 193 l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 271 (635)
T 4g8a_A 193 LRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 271 (635)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCC
T ss_pred ccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccc
Confidence 88776654 68899999996555444 45567889998886553 2233455555555554433221 1111
Q ss_pred ---------------------------CcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccC
Q 037111 316 ---------------------------PQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFG 368 (964)
Q Consensus 316 ---------------------------p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 368 (964)
+..+.....++.+.+.++.+.... .+....+|+.|++.+|.+......
T Consensus 272 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~--- 346 (635)
T 4g8a_A 272 KSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL--- 346 (635)
T ss_dssp TTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---
T ss_pred ccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---
Confidence 222333445555666555554332 244455677777777766654433
Q ss_pred CCCCCcEEEccCCeeccccCccccCCCccceEeecccccCC--CCCCCCcccccCcEEeccCCcccccCCccccccCCcc
Q 037111 369 IYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITG--GIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLN 446 (964)
Q Consensus 369 ~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 446 (964)
.++.|+.++++.|.+.... .+..+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+. ..+..+..+++|+
T Consensus 347 ~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~ 423 (635)
T 4g8a_A 347 KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLE 423 (635)
T ss_dssp BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCC
T ss_pred cchhhhhcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-ccccccccccccc
Confidence 3456677777777665432 34467888888888888753 23444556778889999988886 4566788899999
Q ss_pred eeecccccccCCCc-hhhhccCCCCceecccCccccccCCCcccccccceecCCccccC-ccchhhhhccccCCeecccC
Q 037111 447 DLILNGNQLSGGIP-PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFS-QEIPIQLGKLVQLSELDLSH 524 (964)
Q Consensus 447 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~ 524 (964)
.+++++|......+ ..+..+++++.++++.|.+.+..+..+..++.|+.|+|++|++. +..|..|..+++|+.|+|++
T Consensus 424 ~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~ 503 (635)
T 4g8a_A 424 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503 (635)
T ss_dssp EEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCC
Confidence 99999888775544 56788999999999999999999999999999999999999854 45788999999999999999
Q ss_pred ccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCc-cC-CCCCcccccCCCCccC
Q 037111 525 NLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIE-AF-RHAPVEALQGNKGLCG 601 (964)
Q Consensus 525 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~-~~-~~~~~~~~~~n~~~c~ 601 (964)
|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|||++|++++.+|..- .+ +.+....+.+|||.|+
T Consensus 504 N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 504 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999888632 22 4456677899999996
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-45 Score=434.77 Aligned_cols=436 Identities=20% Similarity=0.219 Sum_probs=317.8
Q ss_pred CCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEE
Q 037111 59 GRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138 (964)
Q Consensus 59 ~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 138 (964)
..++.++++++.+.+.. +..+..+++|++|+|++|++++..|..|+++++|++|+|++|.++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELR-MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCC-GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccC-hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 46889999999988643 335788999999999999999988999999999999999999999 78877 899999999
Q ss_pred ccccccCCcc-c-ccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCC--cEEEEecCCC--CCCCCccccCCC-Ccchhhcc
Q 037111 139 MFVNHLNGSI-P-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSL--VGLYLYNNSL--PGSIPSSIGNLS-NLVYLFLK 211 (964)
Q Consensus 139 l~~n~l~~~~-~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~-~L~~L~L~ 211 (964)
|++|++++.. | .++.+++|++|+|++|++++ ..+..+++| ++|++++|++ ++..|..+..+. ..-.++++
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 204 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFH 204 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEEC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEec
Confidence 9999999843 3 59999999999999999986 345666666 9999999999 888899888765 22256889
Q ss_pred cccccCCccc-cccCccccceeeccccc-----cCCCChhhhhcccccceeecccccccccc----CCcccCccccceee
Q 037111 212 KNHLRGPIPS-SFGYLRKLTKLELSNNQ-----LSGSIPQEIGNLKLLTDLSLSQNQLRGTV----PSSLSNLSSLEILH 281 (964)
Q Consensus 212 ~N~l~~~~~~-~~~~l~~L~~L~L~~N~-----l~~~~p~~~~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~ 281 (964)
+|.+.+.++. .+..+++|+.|++++|+ +.+ ....+..+++|+.|+++++.+++.. +..+ ..++|++|+
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~ 282 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLN 282 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEE
Confidence 9998876654 57789999999999995 232 2346788899999999888876421 1111 234788888
Q ss_pred cccccccccCCccc-----ccCccccEEEeeCccCcccCCc-ccccCCcceEEEeecccccccccccccCCCcCCeeecC
Q 037111 282 LYDNQLSGHIPQEI-----GNFMNLNSLSVGGNQFTGFLPQ-NICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355 (964)
Q Consensus 282 L~~N~l~~~~~~~~-----~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 355 (964)
+++|.+++.+|..+ ..++.|+.++++.|.+ .+|. .+... + ...+|+.|+++
T Consensus 283 l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~--------------------~-~~~~L~~L~l~ 339 (562)
T 3a79_B 283 IYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSV--------------------F-AEMNIKMLSIS 339 (562)
T ss_dssp EEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHH--------------------H-HTCCCSEEEEE
T ss_pred EeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhh--------------------h-ccCcceEEEcc
Confidence 88888887777766 5555666666655555 2221 11100 0 01334445555
Q ss_pred CCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCccccc-
Q 037111 356 KNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGK- 434 (964)
Q Consensus 356 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 434 (964)
+|.+..... + ..+++|++|++++|.+++..|..+.++++|++|+|++|++++.
T Consensus 340 ~n~~~~~~~--~------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 393 (562)
T 3a79_B 340 DTPFIHMVC--P------------------------PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF 393 (562)
T ss_dssp SSCCCCCCC--C------------------------SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT
T ss_pred CCCcccccC--c------------------------cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc
Confidence 444432110 1 2334444555555555555566666677777777777777652
Q ss_pred -CCccccccCCcceeecccccccCCCch-hhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhh
Q 037111 435 -VPLELANLTSLNDLILNGNQLSGGIPP-ELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512 (964)
Q Consensus 435 -~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 512 (964)
+|..+..+++|++|+|++|.+++.+|. .+..+++|++|+|++|++++..|..+. ++|++|+|++|+|+ .+|..+.
T Consensus 394 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~ 470 (562)
T 3a79_B 394 KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT 470 (562)
T ss_dssp HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT
T ss_pred cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc
Confidence 245567777777777777777763443 466777888888888888776666554 67888888888887 5666666
Q ss_pred ccccCCeecccCccccCCCChh-cccccccceeeccCCcCCCccc
Q 037111 513 KLVQLSELDLSHNLLRGEIPPE-ICNLESLEKLNLSHNNLSGSIP 556 (964)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~ 556 (964)
.+++|+.|+|++|+|+ .+|.. +..+++|+.|+|++|++++..+
T Consensus 471 ~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 471 HLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 8888999999999988 45555 8888999999999999987654
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-44 Score=399.41 Aligned_cols=253 Identities=24% Similarity=0.368 Sum_probs=201.9
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec------Cce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------ARH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 761 (964)
++|++.+.||+|+||+||+|+. .+|+.||||+++.........+.+.+|+.+++.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4799999999999999999976 479999999997655555556788999999999999999999998754 367
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
+|+|||||+ |+|.+++... ..+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999996 6899999654 4599999999999999999999999 999999999999999999999999999987
Q ss_pred cCCC----CCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 842 LKPD----SSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 842 ~~~~----~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
+... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||..... .+.+..+.
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-----------~~~l~~I~ 276 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-----------VHQLQLIM 276 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-----------HHHHHHHH
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-----------HHHHHHHH
Confidence 6433 2233467899999999998875 468999999999999999999999853221 11111111
Q ss_pred c--------------------------cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 D--------------------------ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~--------------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ...+.++ .........++.+++.+||..||++|||++|+++
T Consensus 277 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 277 MVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPW-ETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHHCCCCGGGTC-----CHHHHHHSSCCCCCCCH-HHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCH-HHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 1 1111111 1111122356778999999999999999999875
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=391.22 Aligned_cols=199 Identities=27% Similarity=0.364 Sum_probs=170.4
Q ss_pred HHHHhhcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 684 IIRSINNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 684 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
+....+.|++.+.||+|+||+||+|+.+ +++.||||++... .....+.+|+++++.+ +|||||++++++.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 3344578999999999999999999653 4678999998642 2235678999999888 69999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccC
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFG 837 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg 837 (964)
.++.|+||||++||+|.+++. .+++.+++.++.|++.||+|||++ +||||||||+|||++.+ +.+||+|||
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred CCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 999999999999999999983 388999999999999999999999 99999999999999877 799999999
Q ss_pred cccccCCCCC----------------------------CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhC
Q 037111 838 TAKLLKPDSS----------------------------NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKG 888 (964)
Q Consensus 838 ~a~~~~~~~~----------------------------~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg 888 (964)
+|+....... .....+||+.|+|||++.+. .|+.++||||+||++|||++|
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 9976543221 12345799999999999875 489999999999999999999
Q ss_pred CCCCCc
Q 037111 889 QHPKDL 894 (964)
Q Consensus 889 ~~p~~~ 894 (964)
+.||..
T Consensus 244 ~~Pf~~ 249 (361)
T 4f9c_A 244 RYPFYK 249 (361)
T ss_dssp CSSSSC
T ss_pred CCCCCC
Confidence 999853
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=407.09 Aligned_cols=250 Identities=21% Similarity=0.257 Sum_probs=201.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc----CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT----GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
+++|++.+.||+|+||+||+|+.+ +|+.||||++.+.. ...........++.+++.++|||||+++++|++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 578999999999999999999765 79999999996432 1111122233446778888999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+|||||+||+|.+++...+ .+++..++.++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999999997654 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||..... ....+....+......
T Consensus 343 ~~~~--~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~--------~~~~~i~~~i~~~~~~ 412 (689)
T 3v5w_A 343 SKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--------KDKHEIDRMTLTMAVE 412 (689)
T ss_dssp SSCC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC--------CCHHHHHHHHHHCCCC
T ss_pred CCCC--CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHhhcCCCCC
Confidence 5433 345689999999999974 5799999999999999999999999963221 1122333444443333
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPN-----MQIVC 958 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl 958 (964)
.+ .....++.+++.+||..||++|++ ++||+
T Consensus 413 ~p------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 413 LP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp CC------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred CC------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 22 123345778888999999999998 56664
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=403.73 Aligned_cols=420 Identities=23% Similarity=0.285 Sum_probs=226.5
Q ss_pred CcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEc
Q 037111 83 FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162 (964)
Q Consensus 83 ~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 162 (964)
.++|++|++++|++ |.+|++|+++++|++|++++|.++|.+|.+++.+++|+.+++..+.. .++++|++
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~----------~~l~~L~l 78 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD----------RQAHELEL 78 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH----------HTCSEEEC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc----------cCCCEEEe
Confidence 46899999999999 79999999999999999999999999999999999986666655432 35666666
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 163 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
++|++++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++. |.. .++|++|++++|++++
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~- 145 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK- 145 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-
Confidence 6666664 3331 2566666666666664 4533 25666666666666642 211 1566777777777764
Q ss_pred ChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccC
Q 037111 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS 322 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 322 (964)
+| .++.+++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++.+++|+.|++++|++++. |.. .
T Consensus 146 lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~---~ 214 (454)
T 1jl5_A 146 LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDL---P 214 (454)
T ss_dssp CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCC---C
T ss_pred Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCC---c
Confidence 45 46667777777777777664 44432 366777777777764 44 466677777777777776652 221 2
Q ss_pred CcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEee
Q 037111 323 GSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKI 402 (964)
Q Consensus 323 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L 402 (964)
.+|++|++++|.+. .+| .+..+++|+.|++++|++++... ..++|+.|++++|++++... ..++|+.|++
T Consensus 215 ~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~l~~----~~~~L~~L~l 284 (454)
T 1jl5_A 215 LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTDLPE----LPQSLTFLDV 284 (454)
T ss_dssp TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSCCCC----CCTTCCEEEC
T ss_pred CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccccCc----ccCcCCEEEC
Confidence 46667777777666 444 36677777777777777765432 23677777777777765322 1366777777
Q ss_pred cccccCCCCCCCCcccccCcEEeccCCcccccCCcccccc-CCcceeecccccccCCCchhhhccCCCCceecccCcccc
Q 037111 403 AGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANL-TSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSK 481 (964)
Q Consensus 403 ~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 481 (964)
++|.+++. +.. .++|+.|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|++|++++|++++
T Consensus 285 s~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 285 SENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp CSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 77777652 111 1567788888887764 22 22 477888888888875 4443 4778888888888874
Q ss_pred ccCCCcccccccceecCCccccCc--cchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCC--cccc
Q 037111 482 SIPGNMGYLLKLHYLNMSSNEFSQ--EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSG--SIPT 557 (964)
Q Consensus 482 ~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~ 557 (964)
+|. .+++|++|++++|++++ .+|..+.. |+.|.+.+.+|.. +++|+.|++++|++++ .+|.
T Consensus 352 -lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 352 -VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp -CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC---------------------------------
T ss_pred -ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 444 36778888888888877 55655443 3346666666653 4789999999999997 5665
Q ss_pred cccccccceEEEecCCcccccCCC
Q 037111 558 NFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 558 ~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
. ++.|++++|.+.+.+|.
T Consensus 417 s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 417 S------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp ------------------------
T ss_pred h------HhheeCcCcccCCcccc
Confidence 4 56677899999887764
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=401.14 Aligned_cols=373 Identities=21% Similarity=0.234 Sum_probs=235.3
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC-CcccCCCCcccEEEccccccCCcccc-cCCCCCCCE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI-PSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKN 159 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~ 159 (964)
..++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+ |..|+.+++|++|+|++|.+++.+|. ++.+++|++
T Consensus 28 l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 107 (455)
T 3v47_A 28 LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEV 107 (455)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCE
T ss_pred CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCE
Confidence 4478999999999998888888999999999999999887666 45678888888888888888776553 777788888
Q ss_pred EEcCCCCCCCCCCCC--CCCCCCCcEEEEecCCCCCCCCcc-ccCCCCcchhhcccccccCCccccccCc--cccceeec
Q 037111 160 LALDGNHLDGPIPVS--IGNLSSLVGLYLYNNSLPGSIPSS-IGNLSNLVYLFLKKNHLRGPIPSSFGYL--RKLTKLEL 234 (964)
Q Consensus 160 L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L 234 (964)
|+|++|++++.+|.. ++++++|++|+|++|++++..|.. ++++++|++|+|++|++++..+..+..+ .+|+.|++
T Consensus 108 L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l 187 (455)
T 3v47_A 108 LTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRL 187 (455)
T ss_dssp EECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEEC
T ss_pred EeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccc
Confidence 888888877654444 777777777777777777666655 6777777777777777777666666655 56677777
Q ss_pred cccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccC---ccccEEEeeCccC
Q 037111 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF---MNLNSLSVGGNQF 311 (964)
Q Consensus 235 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~l~~N~l 311 (964)
++|.+.+..+..++. .....+..+++|++|++++|++++..|..+..+ .+|+.|++++|.+
T Consensus 188 ~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~ 251 (455)
T 3v47_A 188 SSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYN 251 (455)
T ss_dssp TTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTT
T ss_pred ccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccc
Confidence 777666543332210 000012233444444444444444444433332 4455555555443
Q ss_pred cccCCcccccCCcceEEEeecccccccccccccC--CCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCc
Q 037111 312 TGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRN--CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSS 389 (964)
Q Consensus 312 ~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~ 389 (964)
.+.... .+.+....+..+.. .++|+.|++++|.+++..+..|..+++|+.|+|++|++++..+.
T Consensus 252 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 317 (455)
T 3v47_A 252 MGSSFG--------------HTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDN 317 (455)
T ss_dssp TSCCTT--------------CCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT
T ss_pred cccccc--------------hhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChh
Confidence 322110 01111111111221 24555555555555555555555556666666666666555555
Q ss_pred cccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCC
Q 037111 390 NWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDL 469 (964)
Q Consensus 390 ~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 469 (964)
.|.++++|++|+|++|.+++..+..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|
T Consensus 318 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 397 (455)
T 3v47_A 318 AFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSL 397 (455)
T ss_dssp TTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcc
Confidence 55566666666666666655556666667777777777777766666677777777777777777776555566677777
Q ss_pred CceecccCccccccC
Q 037111 470 GYLDLSANRFSKSIP 484 (964)
Q Consensus 470 ~~L~Ls~N~l~~~~~ 484 (964)
++|+|++|++++..|
T Consensus 398 ~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 398 QKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEEECCSSCBCCCTT
T ss_pred cEEEccCCCcccCCC
Confidence 777777777765544
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=387.15 Aligned_cols=292 Identities=31% Similarity=0.543 Sum_probs=164.8
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCce--eeceEeCCC---CCeeEEecCCCCCCC--ccCCC
Q 037111 6 ASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCT--WSGISCNHA---GRIISINLTSTSLKG--TLDQF 78 (964)
Q Consensus 6 ~~~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~--w~gv~C~~~---~~v~~l~l~~~~l~g--~l~~~ 78 (964)
+.|..+|++||++||+++.+ |. .+++|..+ ++||. |.||+|+.. ++|+.++|+++.+.| .++.
T Consensus 1 ~~c~~~~~~aL~~~k~~~~~-~~-~l~~W~~~-------~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~- 70 (313)
T 1ogq_A 1 ELCNPQDKQALLQIKKDLGN-PT-TLSSWLPT-------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS- 70 (313)
T ss_dssp CCSCHHHHHHHHHHHHHTTC-CG-GGTTCCTT-------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-
T ss_pred CCCCHHHHHHHHHHHHhcCC-cc-cccCCCCC-------CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-
Confidence 36899999999999999964 44 78999743 67898 999999854 567666666666555 3332
Q ss_pred ccCcCcceeEEeccC-CccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCC
Q 037111 79 PFSLFSHLSYLDLNE-NQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSS 156 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~ 156 (964)
.+..+++|++|+|++ |++++.+|..|+++++|++|+|++|.+++.+|..++.+++|++|+|++|.+++.+|. ++.+++
T Consensus 71 ~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 150 (313)
T 1ogq_A 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred hHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCC
Confidence 344455555555553 555555555555555555555555555555555555555555555555555544442 455555
Q ss_pred CCEEEcCCCCCCCCCCCCCCCCC-CCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecc
Q 037111 157 LKNLALDGNHLDGPIPVSIGNLS-SLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235 (964)
Q Consensus 157 L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 235 (964)
|++|+|++|++++.+|..++.++ +|++|++++|++++.+|..++.++ |++|+|++|++++..|..|..+++|++|+|+
T Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 229 (313)
T 1ogq_A 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECC
T ss_pred CCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECC
Confidence 55555555555555555555554 555555555555555555555444 5555555555555455555555555555555
Q ss_pred ccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCcc
Q 037111 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQ 310 (964)
Q Consensus 236 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 310 (964)
+|++++.+|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 230 ~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 230 KNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp SSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred CCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 5555433332 444455555555555555444544555555555555555555444443 444445555555444
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=401.50 Aligned_cols=393 Identities=21% Similarity=0.214 Sum_probs=306.9
Q ss_pred CCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCc-cccccCccccceeecc
Q 037111 157 LKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPI-PSSFGYLRKLTKLELS 235 (964)
Q Consensus 157 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~ 235 (964)
-+.++.++++++ .+|. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ +..|..+++|++|+|+
T Consensus 12 ~~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 356888899988 5666 3 278999999999999888999999999999999999987554 5678999999999999
Q ss_pred ccccCCCChhhhhcccccceeeccccccccccCCc--ccCccccceeecccccccccCCcc-cccCccccEEEeeCccCc
Q 037111 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSS--LSNLSSLEILHLYDNQLSGHIPQE-IGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 236 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~ 312 (964)
+|++++..|..|+++++|++|+|++|++++.+|.. +..+++|++|+|++|++++..|.. +..+++|+.|++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 99999888889999999999999999998755444 888999999999999998777765 788999999999999998
Q ss_pred ccCCcccccC--CcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCcc
Q 037111 313 GFLPQNICQS--GSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSN 390 (964)
Q Consensus 313 ~~~p~~~~~~--~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~ 390 (964)
+..+..+..+ ..++.|++++|.+.+..+..+.. .....+..+++|+.|++++|++++..+..
T Consensus 168 ~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~ 231 (455)
T 3v47_A 168 SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKR 231 (455)
T ss_dssp CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHH
T ss_pred ccChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhh
Confidence 8877776654 56666666666655433322210 00011223455666666666665544443
Q ss_pred ccCC---CccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCcccccc--CCcceeecccccccCCCchhhhc
Q 037111 391 WWNC---PQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANL--TSLNDLILNGNQLSGGIPPELGL 465 (964)
Q Consensus 391 ~~~~---~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~ 465 (964)
+... .+|+.|++++|.+.+.. +..+.+.+..+..+..+ ++|+.|++++|.+++..|..++.
T Consensus 232 ~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 297 (455)
T 3v47_A 232 FFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSH 297 (455)
T ss_dssp HHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTT
T ss_pred hhccccccceeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhccc
Confidence 3322 55666666666544221 11222222233333333 68889999999998888888899
Q ss_pred cCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceee
Q 037111 466 LTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLN 545 (964)
Q Consensus 466 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 545 (964)
+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+.+++|+.|+|++|++++..|..|.++++|++|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 99999999999999988888999999999999999999888899999999999999999999988899999999999999
Q ss_pred ccCCcCCCcccccccccccceEEEecCCcccccCCCCc
Q 037111 546 LSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIE 583 (964)
Q Consensus 546 Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~ 583 (964)
|++|+|++..+..|..+++|+.|++++|+++|.+|...
T Consensus 378 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 99999998888888999999999999999999998654
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=405.04 Aligned_cols=252 Identities=21% Similarity=0.332 Sum_probs=212.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++... .......+.+|+.+|+.++|||||+++++|.+++.+|+||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 468999999999999999999764 7999999998643 3344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC--CceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE--YEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg~a~~~~~ 844 (964)
|||+||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 234 E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 234 EFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp ECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred eecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 9999999999996433 3589999999999999999999999 99999999999999864 8999999999988764
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.. ....+.+..+.......+.
T Consensus 310 ~~-~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~-----------~~~~~~~~~i~~~~~~~~~ 377 (573)
T 3uto_A 310 KQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG-----------ENDDETLRNVKSCDWNMDD 377 (573)
T ss_dssp TS-EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC-----------SSHHHHHHHHHTTCCCCCS
T ss_pred CC-ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----------cCHHHHHHHHHhCCCCCCc
Confidence 43 33456899999999999999999999999999999999999999752 3334555555544433221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........++.+++.+||..||++|||++|+++
T Consensus 378 --~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 378 --SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112233456778889999999999999999986
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=397.81 Aligned_cols=406 Identities=24% Similarity=0.257 Sum_probs=255.0
Q ss_pred CccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCC
Q 037111 101 PSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLS 179 (964)
Q Consensus 101 p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 179 (964)
|+.+ ..+.|++|++++|.+ |.+|++++.+++|++|++++|.++|.+|. ++.+++|+.++++.|.. .
T Consensus 5 p~~~-~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~ 71 (454)
T 1jl5_A 5 PRNV-SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------R 71 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------H
T ss_pred cccc-ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------c
Confidence 4444 468999999999999 79999999999999999999999877664 78888888887776652 5
Q ss_pred CCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecc
Q 037111 180 SLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLS 259 (964)
Q Consensus 180 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 259 (964)
++++|++++|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++. |.. .++|++|+++
T Consensus 72 ~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~ 139 (454)
T 1jl5_A 72 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVS 139 (454)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECC
T ss_pred CCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECc
Confidence 68999999999995 4542 3689999999999997 5643 47899999999999853 321 2689999999
Q ss_pred ccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccc
Q 037111 260 QNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSL 339 (964)
Q Consensus 260 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~ 339 (964)
+|++++ +| .+.++++|++|++++|++++ +|..+ .+|+.|++++|++++ +| .+..+++|++|++++|.+.+ +
T Consensus 140 ~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l 210 (454)
T 1jl5_A 140 NNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-L 210 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-C
T ss_pred CCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-C
Confidence 999995 77 58999999999999999985 56543 589999999999987 44 57888888888888888876 3
Q ss_pred cccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccc
Q 037111 340 PKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNAT 419 (964)
Q Consensus 340 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~ 419 (964)
|... ++|+.|++++|.++.++ .+..+++|+.|++++|++++... .+++|+.|++++|.+++ +|.. .+
T Consensus 211 ~~~~---~~L~~L~l~~n~l~~lp--~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~-l~~~---~~ 277 (454)
T 1jl5_A 211 PDLP---LSLESIVAGNNILEELP--ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTD-LPEL---PQ 277 (454)
T ss_dssp CCCC---TTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSC-CCCC---CT
T ss_pred CCCc---CcccEEECcCCcCCccc--ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccc-cCcc---cC
Confidence 3322 47888888888887543 37788888888888888876332 23677888888887775 3333 36
Q ss_pred cCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhcc-CCCCceecccCccccccCCCcccccccceecC
Q 037111 420 QLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLL-TDLGYLDLSANRFSKSIPGNMGYLLKLHYLNM 498 (964)
Q Consensus 420 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 498 (964)
+|++|++++|++++. |.. .++|+.|++++|++++. + .+ ++|++|++++|++++ +|.. +++|++|++
T Consensus 278 ~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L 344 (454)
T 1jl5_A 278 SLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIA 344 (454)
T ss_dssp TCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred cCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEEC
Confidence 777888888877752 211 15777778887777642 2 22 477777777777765 4433 467777777
Q ss_pred CccccCccchhhhhccccCCeecccCccccC--CCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCccc
Q 037111 499 SSNEFSQEIPIQLGKLVQLSELDLSHNLLRG--EIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576 (964)
Q Consensus 499 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~ 576 (964)
++|++++ +|. .+++|+.|++++|++++ .+|..+.. |+.|.+.+.+|.. +++|+.||+++|+++
T Consensus 345 ~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~ 409 (454)
T 1jl5_A 345 SFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLR 409 (454)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------------
T ss_pred CCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCC
Confidence 7777764 444 35777777777777776 45554432 2346666666653 478999999999999
Q ss_pred c--cCCC
Q 037111 577 G--PIPS 581 (964)
Q Consensus 577 ~--~~~~ 581 (964)
+ .+|.
T Consensus 410 ~~~~iP~ 416 (454)
T 1jl5_A 410 EFPDIPE 416 (454)
T ss_dssp -------
T ss_pred ccccchh
Confidence 8 5663
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=376.08 Aligned_cols=284 Identities=35% Similarity=0.625 Sum_probs=227.9
Q ss_pred CcccHHHHHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeee
Q 037111 677 GKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756 (964)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 756 (964)
..+.+.++....++|+..+.||+|+||.||+|+.++++.||||++...... .....+.+|+.+++.++||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456778888999999999999999999999999888999999998753322 2223688999999999999999999999
Q ss_pred ecCceeEEEEEeccCCCHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 757 SHARHSFLVYEYLERGSLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 757 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
.+.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999997643 3348999999999999999999999877789999999999999999999999
Q ss_pred ccCcccccCCCCCC-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 835 DFGTAKLLKPDSSN-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 835 Dfg~a~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
|||+++........ .....||+.|+|||.+.+..++.++||||||+++|||++|+.||+........ .........
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~ 253 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD---DVMLLDWVK 253 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS---CSBHHHHHT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccccc---chhHHHHHH
Confidence 99999876544332 33456999999999999889999999999999999999999999643221110 111111111
Q ss_pred hhhcc-----CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 037111 914 HMFDA-----RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964 (964)
Q Consensus 914 ~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~~ 964 (964)
..... ............+.+..+.+++.+||+.||++|||+++|++.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 11111 1111111223467788899999999999999999999999999753
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=369.74 Aligned_cols=269 Identities=33% Similarity=0.543 Sum_probs=218.4
Q ss_pred HHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 684 IIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 684 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
+....++|+..+.||+|+||.||+|+.++++.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp CCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 34466789999999999999999999888999999998643 2334578899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 764 LVYEYLERGSLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
+||||+++|+|.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 9999999999999996543 23589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH-Hhh---
Q 037111 842 LKPDS--SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI-DHM--- 915 (964)
Q Consensus 842 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~--- 915 (964)
..... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ....+.. ...
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-----VNLAEWAVESHNNG 263 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSC-----CCHHHHTHHHHTTT
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHH-----HHHHHHhhhccccc
Confidence 54322 222344689999999999999999999999999999999999999864332111 1111111 111
Q ss_pred -hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 916 -FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 916 -~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
......+........+.+..+.+++.+||+.||++|||++||++.|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111122222334678888999999999999999999999999886
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-41 Score=368.81 Aligned_cols=249 Identities=24% Similarity=0.414 Sum_probs=213.0
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+. .+|+.||||++..........+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46899999999999999999976 58999999999765555566678899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp CCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred ECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999997653 488999999999999999999999 99999999999999999999999999998765432
Q ss_pred CCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
......||+.|+|||.+.+..++ .++||||+||++|||++|+.||.. ....+....+.......+.
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-----------~~~~~~~~~i~~~~~~~p~- 235 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRERVLRGKYRIPF- 235 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCCT-
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCCC-
Confidence 34556799999999999888775 799999999999999999999753 2334555555555444331
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....++.+++.+||..||++|||++|+++
T Consensus 236 -----~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 236 -----YMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -----TSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -----CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 12345778889999999999999999975
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=367.96 Aligned_cols=258 Identities=31% Similarity=0.448 Sum_probs=203.9
Q ss_pred HHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
...++|++.+.||+|+||+||+|+. +|+.||||++............+.+|+.++++++||||+++++++.+....++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3457899999999999999999987 588999999976655566667899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|||+++|+|.+++..... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999975432 2388999999999999999999999 8 999999999999999999999999999866
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
...........||+.|+|||.+.+..++.++||||||+++|||++|+.||.... ..+....+.......
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~-----------~~~~~~~~~~~~~~~ 258 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-----------PAQVVAAVGFKCKRL 258 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-----------HHHHHHHHHHSCCCC
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhcCCCC
Confidence 554444455679999999999999999999999999999999999999985322 222222221111111
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.. .......+.+++.+||+.||++|||++++++.|+
T Consensus 259 ~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 259 EI----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 10 1223456788999999999999999999999885
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-40 Score=360.00 Aligned_cols=255 Identities=27% Similarity=0.474 Sum_probs=208.6
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|... +++.||+|++.. ......+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 357999999999999999999764 689999999854 34555678999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 87 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 87 EYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp ECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 9999999999997643 4589999999999999999999999 99999999999999999999999999998765432
Q ss_pred CCc--------------cccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 847 SNW--------------SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 847 ~~~--------------~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
... ....||+.|+|||.+.+..++.++||||||+++|||++|..|+......... .........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~--~~~~~~~~~ 240 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FGLNVRGFL 240 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT--SSBCHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH--Hhhhhhccc
Confidence 211 1457999999999999999999999999999999999999997643322111 111122222
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
........ +..+.+++.+||+.||++|||++++++.|+
T Consensus 241 ~~~~~~~~------------~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 241 DRYCPPNC------------PPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHTCCTTC------------CTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCCC------------CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22222222 234788999999999999999999999885
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=358.83 Aligned_cols=250 Identities=24% Similarity=0.407 Sum_probs=209.4
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++..++..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 35799999999999999999975 578999999986432 233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 97 e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 97 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp ECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 999999999999754 388999999999999999999999 99999999999999999999999999998877665
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.......||+.|+|||.+.+..++.++||||+||++|||++|+.||.... .......+.....+...
T Consensus 171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----------~~~~~~~~~~~~~~~~~-- 237 (297)
T 3fxz_A 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN-----------PLRALYLIATNGTPELQ-- 237 (297)
T ss_dssp CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHHHHHHHCSCCCS--
T ss_pred cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCCC--
Confidence 55566789999999999999999999999999999999999999985321 12222222222211111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||+.||++|||++|+++
T Consensus 238 -~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 238 -NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11234456788899999999999999999975
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=362.75 Aligned_cols=250 Identities=22% Similarity=0.292 Sum_probs=210.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++.+.. ........+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 468999999999999999999765 68999999986432 1233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||++||+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999999999997643 488999999999999999999999 9999999999999999999999999999875544
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+.......+
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----------~~~~~~~~~i~~~~~~~p-- 225 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-----------QDHERLFELILMEEIRFP-- 225 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC--
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC-----------CCHHHHHHHHHcCCCCCC--
Confidence 4455567899999999999999999999999999999999999999852 222344444444333322
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.....++.+++.+||+.||++|| +++|+++
T Consensus 226 ----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 226 ----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 12334577888899999999999 8888864
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=369.88 Aligned_cols=255 Identities=23% Similarity=0.396 Sum_probs=209.2
Q ss_pred hhcccccceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
.++|++.+.||+|+||.||+|+.. ++..||||+++.. ........+.+|+.+++++ +||||+++++++.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 467999999999999999999752 3457999998753 3344567899999999999 89999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 759 ARHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
.+..|+||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 999999999999999999997643 23478999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~------ 309 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------ 309 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC------
Confidence 99999999999999986654332 2233457889999999999999999999999999999999 99997532
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+....+.....+.. ...+...+.+++.+||+.||++||++.|+++.|+
T Consensus 310 -----~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 310 -----PVEELFKLLKEGHRMDK-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp -----CGGGHHHHHHTTCCCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CHHHHHHHHhcCCCCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 12233333322221111 1234456888999999999999999999999885
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=357.18 Aligned_cols=262 Identities=24% Similarity=0.380 Sum_probs=215.1
Q ss_pred CCcccHHHHHHHhhc----------ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC
Q 037111 676 EGKLVYEEIIRSINN----------FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV 744 (964)
Q Consensus 676 ~~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l 744 (964)
.+.++++++..+++. |+..+.||+|+||.||+|+.+ +|+.||||++.... ......+.+|+.+++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDY 99 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhC
Confidence 345677777777653 777889999999999999876 79999999986432 33456788999999999
Q ss_pred CCCceeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 745 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
+||||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 999999999999999999999999999999999854 3489999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~ 904 (964)
++.++.+||+|||++..............||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~-------- 245 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS-------- 245 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------
T ss_pred ECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------
Confidence 999999999999999877655444556689999999999999999999999999999999999999985321
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+....+.....+... ........+.+++.+||+.||++|||++++++
T Consensus 246 ---~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 246 ---PVQAMKRLRDSPPPKLK---NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ---HHHHHHHHHHSSCCCCT---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHHHhcCCCCCcC---ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 22333333332222111 11233456788899999999999999999986
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=356.59 Aligned_cols=259 Identities=22% Similarity=0.336 Sum_probs=204.5
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|++.+.||+|+||+||+|+.++|+.||+|++............+.+|+.++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46899999999999999999998889999999997554444455778899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CCSE-EHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CCCC-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 9985 8888886543 4589999999999999999999999 999999999999999999999999999987765555
Q ss_pred Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc--
Q 037111 848 NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW-- 924 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 924 (964)
......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||....... ....+........+..+
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD--------QLPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT--------HHHHHHHHHCCCCTTTSGG
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHHHHCCCChHHhhh
Confidence 5556678999999999876 568999999999999999999999986432211 11111111111111110
Q ss_pred -------------------cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 -------------------LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 -------------------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..........++.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00111123356788999999999999999999986
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-40 Score=373.61 Aligned_cols=255 Identities=18% Similarity=0.272 Sum_probs=212.9
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|++.+.||+|+||+||+|.. .+|+.||+|++............+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 456899999999999999999965 4788999999976555555567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC---CCCceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD---FEYEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~a~~~ 842 (964)
|||++||+|.+++.... .+++..+..++.||+.|++|||++ +|+||||||+||+++ .++.+||+|||++...
T Consensus 89 ~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999997653 489999999999999999999999 999999999999998 4678999999999877
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
...........||+.|+|||++.+..++.++||||+||++|+|++|+.||.. ....+....+.......
T Consensus 164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~-----------~~~~~~~~~i~~~~~~~ 232 (444)
T 3soa_A 164 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD-----------EDQHRLYQQIKAGAYDF 232 (444)
T ss_dssp CTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC-----------SSHHHHHHHHHHTCCCC
T ss_pred cCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC-----------ccHHHHHHHHHhCCCCC
Confidence 6655555567899999999999998999999999999999999999999752 22334444444443332
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+. .........+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~--~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 233 PS--PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CT--TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred Cc--cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11 111233456788899999999999999999986
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=363.63 Aligned_cols=268 Identities=24% Similarity=0.366 Sum_probs=209.3
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc----eeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----HSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~ 763 (964)
.++|++.+.||+|+||+||+|+.. ++.||||++... ......+..|+.++++++||||+++++++.... ..+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 458999999999999999999886 889999998642 233445667999999999999999999998744 479
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhC-------CCCCeEeccCCCCCeEECCCCceEEecc
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE-------CRPPIVHRDVSSKNVLLDFEYEAHVSDF 836 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------~~~~iiH~dlkp~Nill~~~~~~kl~Df 836 (964)
+||||+++|+|.+++... .+++..+..++.|+++||+|||+. +.++|+||||||+||+++.++.+||+||
T Consensus 99 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 999999999999999654 389999999999999999999976 2348999999999999999999999999
Q ss_pred CcccccCCCCC--Ccccccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC-----
Q 037111 837 GTAKLLKPDSS--NWSELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP----- 904 (964)
Q Consensus 837 g~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~----- 904 (964)
|+++....... ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||..........+.
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99987654432 2234578999999999886 34667899999999999999999998754332221111
Q ss_pred CCChhHHHHhhhccCCCCCcc-ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 905 GANMNEAIDHMFDARLPPPWL-EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.................+... .......+..+.+++.+||+.||++|||+++|++.|+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111222233333333222211 1123356677999999999999999999999999986
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=361.04 Aligned_cols=254 Identities=26% Similarity=0.426 Sum_probs=206.5
Q ss_pred hhcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|++.+.||+|+||.||+|+.. .+..||||+++... .....+.+.+|+.++++++||||+++++++.+++..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 357889999999999999999774 34459999987532 3445578999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 127 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 9999999999999996543 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||... ...+....+....
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~-----------~~~~~~~~~~~~~ 271 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM-----------TNRDVISSVEEGY 271 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS-----------CHHHHHHHHHTTC
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC-----------CHHHHHHHHHcCC
Confidence 44322 122345778999999998899999999999999999999 99997532 2233333333322
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+. ...++..+.+++.+||+.||++|||+++|++.|+
T Consensus 272 ~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 272 RLPA-----PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC-----CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2111 1234456888999999999999999999999986
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=361.84 Aligned_cols=253 Identities=19% Similarity=0.282 Sum_probs=210.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCch----hhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGET----THQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+.|++.+.||+|+||.||+|+.+ +|+.||+|++....... .....+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 357999999999999999999765 68999999997543221 2357889999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC----ceEEeccCc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY----EAHVSDFGT 838 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~ 838 (964)
++||||++||+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999999653 4589999999999999999999999 999999999999998877 799999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
+....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.. ....+....+...
T Consensus 166 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~-----------~~~~~~~~~i~~~ 233 (361)
T 2yab_A 166 AHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-----------DTKQETLANITAV 233 (361)
T ss_dssp CEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC-----------SSHHHHHHHHHTT
T ss_pred ceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhc
Confidence 98765432 23456799999999999998999999999999999999999999852 2233445555444
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+ ..........+.+++.+||.+||++|||+.|+++
T Consensus 234 ~~~~~--~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 234 SYDFD--EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCCC--HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCC--chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 43322 1112233456788899999999999999999875
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=366.75 Aligned_cols=255 Identities=22% Similarity=0.322 Sum_probs=205.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
..++|+..+.||+|+||+||+|+.+ +++.||+|++++... .......+..|..+++++ +||||+++++++.+.+..|
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3568999999999999999999765 578899999975422 222334677899998776 8999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 130 lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 9999999999999997653 489999999999999999999999 99999999999999999999999999998655
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||......... ...........+.......+
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~--~~~~~~~~~~~i~~~~~~~p 282 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--DQNTEDYLFQVILEKQIRIP 282 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------CCHHHHHHHHHHCCCCCC
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccccccc--chhhHHHHHHHHhccccCCC
Confidence 4445556778999999999999999999999999999999999999999643321110 11112233344444443322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
.....++.+++.+||+.||++||++
T Consensus 283 ------~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 283 ------RSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ------TTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ------CcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1233457788899999999999996
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-40 Score=365.70 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=204.6
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCcee
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 762 (964)
...++|+..+.||+|+||+||+|+.+ +++.||||+++... ........+.+|..+++.+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 35678999999999999999999765 68999999987532 1233456788899999887 699999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+||||++||+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+..
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 99999999999999997653 489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+.......
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-----------~~~~~~~~~i~~~~~~~ 243 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA-----------ENEDDLFEAILNDEVVY 243 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCC
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC-----------CCHHHHHHHHHcCCCCC
Confidence 5454455567899999999999998999999999999999999999999752 23345555555554433
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNM------QIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~------~evl~ 959 (964)
+. .....+.+++.+|+.+||++||++ +++++
T Consensus 244 p~------~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 244 PT------WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CT------TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC------CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 21 123457788889999999999998 66653
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-40 Score=376.48 Aligned_cols=369 Identities=19% Similarity=0.197 Sum_probs=221.5
Q ss_pred eccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCC
Q 037111 90 DLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDG 169 (964)
Q Consensus 90 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~ 169 (964)
........+..+..++++++|++|+|++|.+++ +| .++.+++|++|++++|++++. | ++.+++|++|+|++|++++
T Consensus 24 ~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~-~~~l~~L~~L~Ls~N~l~~ 99 (457)
T 3bz5_A 24 VAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D-LSQNTNLTYLACDSNKLTN 99 (457)
T ss_dssp HHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSC
T ss_pred HHHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c-cccCCCCCEEECcCCCCce
Confidence 333445555566678888888888888888885 45 577888888888888888775 3 7777888888888888776
Q ss_pred CCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhc
Q 037111 170 PIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGN 249 (964)
Q Consensus 170 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 249 (964)
. | ++++++|++|++++|++++ +| ++++++|++|++++|++++. .++.+++|++|++++|+..+.+ .++.
T Consensus 100 ~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~ 168 (457)
T 3bz5_A 100 L-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTP 168 (457)
T ss_dssp C-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTT
T ss_pred e-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--cccc
Confidence 4 3 7777778888888887775 33 67777777777777777763 2566667777777777544444 2556
Q ss_pred ccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEE
Q 037111 250 LKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFS 329 (964)
Q Consensus 250 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ 329 (964)
+++|++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++++.
T Consensus 169 l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i--------------- 227 (457)
T 3bz5_A 169 QTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI--------------- 227 (457)
T ss_dssp CTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC---------------
T ss_pred CCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc---------------
Confidence 6666666666666664 33 55556666666666666542 244555555555555555431
Q ss_pred eecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCC
Q 037111 330 VHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITG 409 (964)
Q Consensus 330 l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~ 409 (964)
| +..+++|+.|++++|++++.+ +..+++|+.|++++|
T Consensus 228 ----------p--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n---------------------------- 264 (457)
T 3bz5_A 228 ----------D--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT---------------------------- 264 (457)
T ss_dssp ----------C--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC----------------------------
T ss_pred ----------C--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC----------------------------
Confidence 1 333444444444444444332 222333444443332
Q ss_pred CCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCccc
Q 037111 410 GIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGY 489 (964)
Q Consensus 410 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 489 (964)
+|+.|++++|.+.+.+| ++.+++|+.|+|++|...+.+|. ...+|+.|++++|
T Consensus 265 ----------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~------------ 317 (457)
T 3bz5_A 265 ----------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN------------ 317 (457)
T ss_dssp ----------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC------------
T ss_pred ----------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc------------
Confidence 23444555555444443 34455566666666655544442 2344455544444
Q ss_pred ccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEE
Q 037111 490 LLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSID 569 (964)
Q Consensus 490 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ 569 (964)
++|++|++++|+|++. + ++.+++|+.|++++|+|++ ++.|+.|++++|.++|. ..+..|..++
T Consensus 318 -~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~ 380 (457)
T 3bz5_A 318 -PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKET 380 (457)
T ss_dssp -TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBC
T ss_pred -ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccc
Confidence 4566666666666653 2 6666666666666666664 23455566666666654 2344556667
Q ss_pred ecCCcccccCCC
Q 037111 570 ISYNELDGPIPS 581 (964)
Q Consensus 570 ls~N~l~~~~~~ 581 (964)
+++|+++|.+|.
T Consensus 381 l~~N~l~g~ip~ 392 (457)
T 3bz5_A 381 LTNNSLTIAVSP 392 (457)
T ss_dssp CBTTBEEEECCT
T ss_pred cccCcEEEEcCh
Confidence 777777777664
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=363.63 Aligned_cols=254 Identities=18% Similarity=0.244 Sum_probs=209.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc---CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT---GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
+.|++.+.||+|+||+||+|..+ +++.||||++.... ......+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 57999999999999999999764 78999999986421 122245778999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc---eEEeccCcc
Q 037111 765 VYEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE---AHVSDFGTA 839 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~a 839 (964)
||||+++|+|.+++... ....+++..+..++.||++||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999999888653 334588999999999999999999999 9999999999999987654 999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..............||+.|+|||++.+..++.++||||+||++|+|++|+.||... ..+....+....
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~------------~~~~~~~i~~~~ 248 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT------------KERLFEGIIKGK 248 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS------------HHHHHHHHHHTC
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc------------HHHHHHHHHcCC
Confidence 88766544445668999999999999999999999999999999999999998531 123344444443
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+. .........+.+++.+||..||++|||+.++++
T Consensus 249 ~~~~~--~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 249 YKMNP--RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCCCH--HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCc--cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 33221 111233456888999999999999999999975
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=352.85 Aligned_cols=258 Identities=25% Similarity=0.340 Sum_probs=207.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57999999999999999999754 78899999986432 33444578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... ++++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999997654 489999999999999999999999 99999999999999999999999999998765443
Q ss_pred -CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 -SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 -~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.......||+.|+|||.+.+..++.++||||+|+++|||++|+.||.... .............+.. .
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----------~~~~~~~~~~~~~~~~-~ 233 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET-----------AVSIAIKHIQDSVPNV-T 233 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC-----------HHHHHHHHHSSCCCCH-H
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----------hHHHHHHHhhccCCCc-c
Confidence 22334578999999999999999999999999999999999999985322 2222223333322211 1
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhcC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-NMQIVCKLLSG 963 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-s~~evl~~L~~ 963 (964)
.....+.+..+.+++.+|+++||++|| +++++.+.|+.
T Consensus 234 ~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 234 TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 122233456788999999999999999 89999888753
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=350.39 Aligned_cols=251 Identities=23% Similarity=0.391 Sum_probs=208.8
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 57999999999999999999988889999999975322 346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-C
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS-S 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 847 (964)
+++|+|.+++.... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 87 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 87 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp CTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 99999999996543 3589999999999999999999999 99999999999999999999999999998664332 1
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.. ....+....+........
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~--- 228 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN-----------RSNSEVVEDISTGFRLYK--- 228 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-----------CCHHHHHHHHHTTCCCCC---
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC-----------CCHHHHHHHHhcCccCCC---
Confidence 2233456788999999998999999999999999999999 8999753 222333444333222111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+.+++.+||+.||++||+++++++.|+
T Consensus 229 --~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 229 --PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1122355788899999999999999999999885
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=362.30 Aligned_cols=254 Identities=20% Similarity=0.305 Sum_probs=211.1
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|+..+.||+|+||.||+|..+ +|+.||+|++............+.+|+.++++++||||+++++++.+++..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3568999999999999999999764 689999999976555555567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~a~~~ 842 (964)
|||+++|+|.+++... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++ .+||+|||++...
T Consensus 107 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999999999654 3489999999999999999999999 999999999999998654 5999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||... ...+....+.......
T Consensus 182 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~-----------~~~~~~~~i~~~~~~~ 249 (362)
T 2bdw_A 182 NDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-----------DQHRLYAQIKAGAYDY 249 (362)
T ss_dssp TTCC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHTCCCC
T ss_pred cCCc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----------CHHHHHHHHHhCCCCC
Confidence 5432 234567999999999999989999999999999999999999997532 2234444444433322
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+. .........+.+++.+||..||++||++.++++
T Consensus 250 ~~--~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 250 PS--PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp CT--TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred Cc--ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11 112234456788999999999999999999875
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=353.81 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=201.0
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|+||+||+|+..+++.||+|++............+.+|+.++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57999999999999999999888899999999975443344446788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence 986 9999986543 4588999999999999999999999 9999999999999999999999999999876544444
Q ss_pred ccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc---c------
Q 037111 849 WSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---A------ 918 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~------ 918 (964)
.....||+.|+|||.+.+. .++.++||||+||++|||++|+.||..... .+....+.. .
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~~~~ 225 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-----------ADQLMRIFRILGTPNSKNW 225 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHHHCCCCTTTS
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHHHHCCCChhhc
Confidence 4456789999999998764 589999999999999999999999864221 111111100 0
Q ss_pred -----------CCC---CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 -----------RLP---PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 -----------~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
... +.............+.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 00001111223456788999999999999999999975
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=370.17 Aligned_cols=253 Identities=24% Similarity=0.399 Sum_probs=207.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+++ +++.||||+++.. ........+.+|+.++++++||||+++++++.+++..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 357899999999999999999876 7899999998743 23344467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 192 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp ECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 9999999999997543 3488999999999999999999999 99999999999999999999999999998654332
Q ss_pred CCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-CCCC
Q 037111 847 SNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPP 922 (964)
Q Consensus 847 ~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 922 (964)
... ....+++.|+|||.+.+..++.++|||||||++|||++ |+.||... ...+....+... +.+.
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~-----------~~~~~~~~~~~~~~~~~ 336 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL-----------SNQQTREFVEKGGRLPC 336 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS-----------CHHHHHHHHHTTCCCCC
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------CHHHHHHHHHcCCCCCC
Confidence 111 12235678999999998899999999999999999998 99997532 222222222222 1221
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+ ..++..+.+++.+||+.||++|||++++++.|+
T Consensus 337 ~------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 337 P------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp C------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1 223456888999999999999999999999885
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=351.98 Aligned_cols=256 Identities=20% Similarity=0.318 Sum_probs=205.5
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||+||+|+.+ +++.||||++............+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999765 68899999997655555556788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++ ++.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 9986 6666665432 4589999999999999999999999 999999999999999999999999999987765555
Q ss_pred CccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc---CCCC-
Q 037111 848 NWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA---RLPP- 922 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~- 922 (964)
......||+.|+|||.+.+.. ++.++||||+||++|||++|+.||... ....+....+... ....
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~----------~~~~~~~~~i~~~~~~~~~~~ 226 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG----------NDVDDQLKRIFRLLGTPTEEQ 226 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC----------SSHHHHHHHHHHHHCCCCTTT
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC----------CCHHHHHHHHHHHhCCCChhh
Confidence 555668899999999998766 799999999999999999998886321 1122222222110 0000
Q ss_pred -------------------CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 -------------------PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 -------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.............+.+++.+|++.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000111223456778999999999999999999985
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=372.84 Aligned_cols=228 Identities=21% Similarity=0.214 Sum_probs=198.3
Q ss_pred CccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCC
Q 037111 78 FPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSL 157 (964)
Q Consensus 78 ~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L 157 (964)
.+++.+++|++|+|++|.+++. | .++.+++|++|+|++|.+++ +| ++.+++|++|++++|++++. + ++.+++|
T Consensus 36 ~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L 108 (457)
T 3bz5_A 36 ISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKL 108 (457)
T ss_dssp EEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTC
T ss_pred cChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCcC
Confidence 3567789999999999999974 5 79999999999999999996 45 89999999999999999986 3 8999999
Q ss_pred CEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecccc
Q 037111 158 KNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNN 237 (964)
Q Consensus 158 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 237 (964)
++|++++|++++ +| ++.+++|++|++++|++++. + ++++++|++|++++|+..+.+ .++.+++|++|++++|
T Consensus 109 ~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 109 TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCC
Confidence 999999999997 44 89999999999999999974 3 889999999999999665555 5889999999999999
Q ss_pred ccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCc
Q 037111 238 QLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQ 317 (964)
Q Consensus 238 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 317 (964)
++++ +| ++.+++|+.|++++|++++. .+..+++|++|++++|++++ +| ++.+++|+.|++++|++++..+
T Consensus 181 ~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~- 250 (457)
T 3bz5_A 181 KITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV- 250 (457)
T ss_dssp CCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC-
T ss_pred ccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH-
Confidence 9997 45 88999999999999999964 38899999999999999997 56 8899999999999999997532
Q ss_pred ccccCCcceEEEeec
Q 037111 318 NICQSGSLQYFSVHD 332 (964)
Q Consensus 318 ~~~~~~~L~~L~l~~ 332 (964)
..+++|+.|++++
T Consensus 251 --~~l~~L~~L~l~~ 263 (457)
T 3bz5_A 251 --STLSKLTTLHCIQ 263 (457)
T ss_dssp --TTCTTCCEEECTT
T ss_pred --HHCCCCCEEeccC
Confidence 2344455554443
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=348.97 Aligned_cols=253 Identities=26% Similarity=0.416 Sum_probs=209.1
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|+.+++..||+|++.... ....++.+|+.++++++||||+++++++.++...++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 35799999999999999999999888899999987532 234678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp CCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred ccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 999999999997643 3489999999999999999999999 999999999999999999999999999987654432
Q ss_pred C-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 848 N-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 848 ~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
. .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||+... ..+....+........
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~-- 226 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT-----------NSEVVLKVSQGHRLYR-- 226 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC-----------HHHHHHHHHTTCCCCC--
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC-----------hHHHHHHHHcCCCCCC--
Confidence 1 223456778999999998889999999999999999999 999975322 2233333322221111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+..+.+++.+||+.||++|||++++++.|+.
T Consensus 227 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (268)
T 3sxs_A 227 ---PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEP 261 (268)
T ss_dssp ---CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGG
T ss_pred ---CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 01123457889999999999999999999999863
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=358.28 Aligned_cols=254 Identities=22% Similarity=0.328 Sum_probs=206.1
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (964)
.++|+..+.||+|+||.||+|+.+ +++.||+|++.... ........+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 467999999999999999999765 68899999997543 2334456788999999887 89999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 999999999999997653 489999999999999999999999 999999999999999999999999999986554
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||......... ...........+.......+
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~i~~~~~~~p- 239 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--DQNTEDYLFQVILEKQIRIP- 239 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---------CHHHHHHHHHHCCCCCC-
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccc--ccccHHHHHHHHHcCCCCCC-
Confidence 444455678999999999999999999999999999999999999999643221110 01112233333433333322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
......+.+++.+||+.||++||++
T Consensus 240 -----~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 240 -----RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -----CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1233457788899999999999996
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=366.22 Aligned_cols=252 Identities=27% Similarity=0.490 Sum_probs=196.8
Q ss_pred hcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|++.+.||+|+||.||+|+.+ ++..||||+++... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 47999999999999999999764 57789999987532 34456789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 999999999999997543 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-C
Q 037111 845 DSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-R 919 (964)
Q Consensus 845 ~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 919 (964)
.... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..+....+... +
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-----------~~~~~~~i~~~~~ 268 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-----------NQDVIKAVDEGYR 268 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-----------HHHHHHHHHTTEE
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHcCCC
Confidence 3221 112235678999999999999999999999999999998 999975321 22333332222 1
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.+ ..++..+.+++.+||+.||++||++++|++.|+
T Consensus 269 ~~~~------~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 269 LPPP------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp CCCC------TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC------ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 1111 234456889999999999999999999999885
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=356.32 Aligned_cols=251 Identities=21% Similarity=0.295 Sum_probs=210.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|..+ +++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 367999999999999999999765 6788999998642 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC--CCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF--EYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~ 844 (964)
||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++. ++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 81 EFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred EeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 9999999999996533 3589999999999999999999999 9999999999999987 78999999999987654
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. ......||+.|+|||.+.+..++.++||||+||++|+|++|+.||.. ....+....+.......+
T Consensus 157 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~~~i~~~~~~~~- 223 (321)
T 1tki_A 157 GD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA-----------ETNQQIIENIMNAEYTFD- 223 (321)
T ss_dssp TC-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHHTCCCCC-
T ss_pred CC-ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC-----------CCHHHHHHHHHcCCCCCC-
Confidence 32 33456789999999999988899999999999999999999999853 223345555555444332
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.++.+++.+||..||++|||+.|+++
T Consensus 224 -~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 224 -EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp -HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1112234566888999999999999999999986
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=349.64 Aligned_cols=272 Identities=33% Similarity=0.563 Sum_probs=221.2
Q ss_pred CcccHHHHHHHhhccccc------ceeecCCceeEEEEEeCCCCeEEEEEecccc--CchhhHHHHHHHHHHHhCCCCCc
Q 037111 677 GKLVYEEIIRSINNFDES------FCIGRGGYGSVYKAELPSGDTVAVKKLHSFT--GETTHQKEFLSEIKALTGVRHRN 748 (964)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~n 748 (964)
..+.+.++.++++.|... +.||+|+||.||+|.. +++.||||++.... ........+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 457788999999998887 8999999999999987 58899999986532 23344678999999999999999
Q ss_pred eeeEEeeeecCceeEEEEEeccCCCHHHHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC
Q 037111 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSE-TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 749 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~ 827 (964)
|+++++++.+.+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 999999999999999999999999999999753 334689999999999999999999999 9999999999999999
Q ss_pred CCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCC
Q 037111 828 EYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905 (964)
Q Consensus 828 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~ 905 (964)
++.+||+|||++......... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||.........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---- 243 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL---- 243 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT----
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH----
Confidence 999999999999866543222 234568999999998765 5899999999999999999999998754331110
Q ss_pred CChhHH-------HHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 906 ANMNEA-------IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 906 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+. +....+...+ ......+..+.+++.+||+.||++|||+++|++.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKMN-----DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSCS-----CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHhhhhhhhhhhhcccccc-----ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 000010 1112222222 223567788999999999999999999999999886
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=347.57 Aligned_cols=251 Identities=21% Similarity=0.313 Sum_probs=209.0
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ ++.||||++..........+.+.+|+.++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 467999999999999999999985 88999999986655566667899999999999999999999999887 788999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
|||+++|+|.+++.......+++..+..++.|++.||+|||+. + ++||||||+||+++.++.++++|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 9999999999999876666799999999999999999999998 7 9999999999999999999999998876533
Q ss_pred CCCCCccccccccccccccccccCCCCc---chhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTE---KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
. ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||... ...+..........
T Consensus 165 ~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-----------~~~~~~~~~~~~~~ 228 (271)
T 3kmu_A 165 S-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL-----------SNMEIGMKVALEGL 228 (271)
T ss_dssp C-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS-----------CHHHHHHHHHHSCC
T ss_pred c-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc-----------ChHHHHHHHHhcCC
Confidence 2 2346899999999998765544 799999999999999999998532 22233333332222
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.. ....+..+.+++.+||+.||++|||++++++.|+
T Consensus 229 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 229 RPTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2221 1223456888999999999999999999999886
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=359.69 Aligned_cols=264 Identities=25% Similarity=0.389 Sum_probs=203.6
Q ss_pred hhcccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--c
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--R 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 760 (964)
.++|++.+.||+|+||+||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 35799999999999999999974 36889999998742 344557899999999999999999999998654 4
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred ceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 6899999999999999997653 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccc-----cCCCCCCCChhHHH
Q 037111 841 LLKPDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSL-----SDSSLPGANMNEAI 912 (964)
Q Consensus 841 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~ 912 (964)
........ .....+++.|+|||.+.+..++.++||||||+++|||+||..|+...... ..............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 76543321 22345677899999999999999999999999999999999997643221 00000000011112
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+......+. ...++..+.+++.+||+.||++|||++|+++.|+
T Consensus 243 ~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 243 ELLKNNGRLPR-----PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHTTCCCCC-----CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHhccCcCCC-----CcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 22211111111 1234566888999999999999999999999885
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=352.32 Aligned_cols=256 Identities=25% Similarity=0.380 Sum_probs=198.3
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHh--CCCCCceeeEEeeeec----Cce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALT--GVRHRNIVKFYGFCSH----ARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~--~l~h~niv~l~~~~~~----~~~ 761 (964)
.++|+..+.||+|+||+||+|+. +++.||||++... ....+..|.+++. .++||||+++++++.. ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 35799999999999999999988 5899999998632 2244455555554 4899999999998654 356
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH--------HECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
.++||||+++|+|.++++. ..+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 81 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEE
T ss_pred eEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEE
Confidence 8999999999999999954 34899999999999999999999 77 9999999999999999999999
Q ss_pred eccCcccccCCCCCC----ccccccccccccccccccC------CCCcchhHHHHHHHHHHHHhC----------CCCCC
Q 037111 834 SDFGTAKLLKPDSSN----WSELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------QHPKD 893 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDvwSlGvll~el~tg----------~~p~~ 893 (964)
+|||+++........ .....||+.|+|||.+.+. .++.++|||||||++|||+|| +.||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 999999766544332 2234799999999999876 455799999999999999999 55553
Q ss_pred ccccccCCCCCCCChhHHHHhhh-cc-CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 894 LLSSLSDSSLPGANMNEAIDHMF-DA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.... ............ .. ..+...........+..+.+++.+||+.||++|||+++|++.|+
T Consensus 235 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 235 DVVP-------NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp TTSC-------SSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccCC-------CCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 2211 111112222221 11 11111112233457788999999999999999999999999986
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-40 Score=377.16 Aligned_cols=252 Identities=23% Similarity=0.445 Sum_probs=209.4
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|.++++..||||+++... ...+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 35788999999999999999999888899999997532 34578999999999999999999999987 567899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 99999999999765444588999999999999999999999 999999999999999999999999999987653321
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-CCCCCc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 924 (964)
......+++.|+|||.+.+..++.++|||||||++|||+| |+.||.. ....+....+... +.+.+
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~-----------~~~~~~~~~i~~~~~~~~~- 407 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG-----------MSNPEVIRALERGYRMPRP- 407 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-----------CCHHHHHHHHHHTCCCCCC-
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHcCCCCCCC-
Confidence 1123346788999999998999999999999999999999 9999752 2223333333322 22211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..++..+.+++.+||+.||++|||+++|++.|+.
T Consensus 408 -----~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~ 441 (454)
T 1qcf_A 408 -----ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441 (454)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 2345668899999999999999999999999864
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-39 Score=353.55 Aligned_cols=253 Identities=18% Similarity=0.285 Sum_probs=208.5
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc----hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE----TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+.|+..+.||+|+||.||+|+.+ +|+.||+|++...... ......+.+|+.++++++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356999999999999999999765 6899999998754322 12357899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC----ceEEeccCc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY----EAHVSDFGT 838 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~ 838 (964)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 9999999999999999653 4589999999999999999999999 999999999999999887 899999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
++...... ......||+.|+|||.+.+..++.++||||+||++|+|++|+.||.. ....+....+...
T Consensus 165 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~~~~~~~ 232 (326)
T 2y0a_A 165 AHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-----------DTKQETLANVSAV 232 (326)
T ss_dssp CEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC-----------SSHHHHHHHHHHT
T ss_pred CeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC-----------CCHHHHHHHHHhc
Confidence 98765432 23456799999999999999999999999999999999999999752 1223333333333
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+ ..........+.+++.+||..||++|||+.++++
T Consensus 233 ~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 233 NYEFE--DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCCCC--HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCcC--ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22221 1111233456788999999999999999999986
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=360.64 Aligned_cols=252 Identities=24% Similarity=0.330 Sum_probs=206.9
Q ss_pred HHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCce
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARH 761 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 761 (964)
....++|+..+.||+|+||.||+|+.+ +|+.||||+++.... .......+..|..+++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999775 688999999875321 123345677898888876 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 999999999999999997643 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
............||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+......
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----------~~~~~~~~~i~~~~~~ 236 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-----------QDEEELFHSIRMDNPF 236 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCC
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC-----------CCHHHHHHHHHhCCCC
Confidence 55444445567899999999999999999999999999999999999999852 2223444444433322
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ-IVC 958 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~-evl 958 (964)
.+ ......+.+++.+||..||++||++. +++
T Consensus 237 ~p------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 237 YP------RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CC------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CC------cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11 11334577888999999999999987 553
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=357.85 Aligned_cols=250 Identities=21% Similarity=0.323 Sum_probs=208.6
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
..++|+..+.||+|+||.||+|+.+ +++.||||++..... .......+..|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4578999999999999999999776 478899999875321 223456788999999888 7999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||++||+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999997644 489999999999999999999999 99999999999999999999999999998655
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+.......+
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-----------~~~~~~~~~i~~~~~~~p 241 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-----------EDEDELFQSIMEHNVAYP 241 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC-----------CCHHHHHHHHHhCCCCCC
Confidence 444445567899999999999999999999999999999999999999752 223345555555443322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPN-----MQIVC 958 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl 958 (964)
.....++.+++.+||..||++||+ +++++
T Consensus 242 ------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~ 275 (353)
T 2i0e_A 242 ------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 275 (353)
T ss_dssp ------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHH
T ss_pred ------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 123456788889999999999995 46665
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=350.84 Aligned_cols=261 Identities=21% Similarity=0.299 Sum_probs=209.6
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc--eeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR--HSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 765 (964)
++|++.+.||+|+||+||+|+.. +++.||||++..... ......+.+|+.++++++||||+++++++.... ..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 57999999999999999999765 589999999875332 233567889999999999999999999998755 78999
Q ss_pred EEeccCCCHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE----CCCCceEEeccCccc
Q 037111 766 YEYLERGSLARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL----DFEYEAHVSDFGTAK 840 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~a~ 840 (964)
|||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999976432 3489999999999999999999999 99999999999999 788889999999998
Q ss_pred ccCCCCCCccccccccccccccccc--------cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAY--------TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
....... .....||+.|+|||.+. +..++.++|||||||++|||++|+.||....... ...+.+
T Consensus 165 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~~~ 236 (319)
T 4euu_A 165 ELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-------RNKEVM 236 (319)
T ss_dssp ECCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG-------GCHHHH
T ss_pred ecCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc-------hhHHHH
Confidence 7654432 33457999999999986 5678999999999999999999999986432211 112333
Q ss_pred HhhhccCCCC-------------------CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 913 DHMFDARLPP-------------------PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 913 ~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
..+..+..+. +............+.+++.+||+.||++|||++|+++-.
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 237 YKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred HHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 3332221110 111123356777888999999999999999999999864
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=354.63 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=197.5
Q ss_pred hhcccccceeecCCceeEEEEEe----CCCCeEEEEEeccccC--chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL----PSGDTVAVKKLHSFTG--ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|+..+.||+|+||.||+|+. .+++.||+|+++.... .......+.+|+.++++++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999976 4789999999875421 22334567889999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999997643 488899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
............||+.|+|||.+.+..++.++||||||+++|||++|+.||.. ....+....+......
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~-----------~~~~~~~~~i~~~~~~ 239 (327)
T 3a62_A 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG-----------ENRKKTIDKILKCKLN 239 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC-----------SSHHHHHHHHHHTCCC
T ss_pred cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC-----------CCHHHHHHHHHhCCCC
Confidence 55444444556799999999999999999999999999999999999999853 2233444555444333
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.+ ......+.+++.+||..||++|| ++.++++
T Consensus 240 ~p------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 240 LP------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CC------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CC------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 22 12335578888999999999999 6777764
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-39 Score=350.39 Aligned_cols=247 Identities=25% Similarity=0.349 Sum_probs=207.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++..... .......+.+|+.+++.++||||+++++++.+....|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 468999999999999999999765 789999999864321 223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 99999999999997643 488999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||.. ....+....+.......+
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-----------~~~~~~~~~i~~~~~~~p-- 223 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD-----------SNTMKTYEKILNAELRFP-- 223 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHHCCCCCC--
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCC--
Confidence 2345799999999999999999999999999999999999999853 223344455544443322
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.....++.+++.+|+..||++|| +++++++
T Consensus 224 ----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 224 ----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 12234577888899999999999 8888864
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=360.16 Aligned_cols=256 Identities=24% Similarity=0.409 Sum_probs=210.8
Q ss_pred HhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
..++|+..+.||+|+||.||+|+.. +++.||||+++... .......+.+|+.++++++||||+++++++.+++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 3568999999999999999999764 34789999987532 3444578999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccC
Q 037111 761 HSFLVYEYLERGSLARILSSET----------------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDV 818 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dl 818 (964)
..++||||+++|+|.+++.... ...+++..++.++.||++||+|||++ +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 9999999999999999997642 15689999999999999999999999 9999999
Q ss_pred CCCCeEECCCCceEEeccCcccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 037111 819 SSKNVLLDFEYEAHVSDFGTAKLLKPDS--SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLL 895 (964)
Q Consensus 819 kp~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~ 895 (964)
||+||+++.++.+||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~- 279 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG- 279 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC-
Confidence 9999999999999999999997654332 12234567889999999999899999999999999999999 9999752
Q ss_pred ccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 896 SSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+....+.....+.. ...++..+.+++.+||+.||++||++.+|++.|+
T Consensus 280 ----------~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 280 ----------MAHEEVIYYVRDGNILAC-----PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp ----------SCHHHHHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----------CChHHHHHHHhCCCcCCC-----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 223344444444333221 1233456888999999999999999999999886
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=370.64 Aligned_cols=247 Identities=26% Similarity=0.436 Sum_probs=205.2
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-eeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-HSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|.+. ++.||||+++... ..+.|.+|+.++++++||||+++++++.... ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 467899999999999999999886 7899999987432 3467999999999999999999999987665 799999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.......+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 999999999999877666689999999999999999999999 9999999999999999999999999999854322
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-CCCCCc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 924 (964)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+....+..+ +.+.+
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----------~~~~~~i~~~~~~~~p- 408 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----------KDVVPRVEKGYKMDAP- 408 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-----------TTHHHHHHTTCCCCCC-
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC-
Confidence 123357889999999999999999999999999999998 9999853221 1222222222 12111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..++..+.+++.+||+.||++|||+.++++.|+
T Consensus 409 -----~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 409 -----DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp -----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 234567889999999999999999999999885
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=355.29 Aligned_cols=252 Identities=25% Similarity=0.351 Sum_probs=201.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 468999999999999999999765 789999999864322 223356889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 85 EYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp ECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 999999999999644 3489999999999999999999999 99999999999999999999999999998654322
Q ss_pred --CCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 847 --SNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 847 --~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... . .............+
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~-~~~~~~~~~~~~~~ 229 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---------C-QEYSDWKEKKTYLN 229 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT---------S-HHHHHHHTTCTTST
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH---------H-HHHHHHhcccccCC
Confidence 22345679999999999988775 77899999999999999999998632221 0 11111111111111
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .......+.+++.+||..||++|||++|+++
T Consensus 230 ~----~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 230 P----WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp T----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c----cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1 1233455778899999999999999999875
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=362.60 Aligned_cols=255 Identities=23% Similarity=0.381 Sum_probs=210.1
Q ss_pred hhcccccceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
.++|++.+.||+|+||.||+|+.. .+..||||+++.. ........+.+|+++++++ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 357999999999999999999752 2357999998753 3344557889999999999 89999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 759 ARHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
++..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 999999999999999999997644 23589999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~------- 296 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------- 296 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-------
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-------
Confidence 99999999999999987654432 2234467889999999999999999999999999999999 9999752
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+....+........ ...+..++.+++.+||+.||++|||+++|++.|+
T Consensus 297 ----~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 297 ----VPVEELFKLLKEGHRMDK-----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp ----CCHHHHHHHHHTTCCCCC-----CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHcCCCCCC-----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 223333333333222211 1123456888999999999999999999999885
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=350.63 Aligned_cols=251 Identities=22% Similarity=0.305 Sum_probs=199.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc------------------------hhhHHHHHHHHHHHh
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE------------------------TTHQKEFLSEIKALT 742 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------------------~~~~~~~~~E~~~l~ 742 (964)
.++|+..+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999754 6889999998643211 112356889999999
Q ss_pred CCCCCceeeEEeeeec--CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 037111 743 GVRHRNIVKFYGFCSH--ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSS 820 (964)
Q Consensus 743 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp 820 (964)
+++||||+++++++.+ .+..++||||+++|+|.+++. ...+++..+..++.|+++||+|||++ +|+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 9999999999999987 568999999999999988763 23589999999999999999999999 999999999
Q ss_pred CCeEECCCCceEEeccCcccccCCCCCCccccccccccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 037111 821 KNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGQHPKDLLSS 897 (964)
Q Consensus 821 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~sDvwSlGvll~el~tg~~p~~~~~~ 897 (964)
+||+++.++.+||+|||+++.............||+.|+|||.+.+.. ++.++|||||||++|||++|+.||...
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-- 243 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-- 243 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS--
T ss_pred HHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc--
Confidence 999999999999999999987765544445668999999999998765 377899999999999999999998532
Q ss_pred ccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 898 LSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.......+. .......+.+++.+||+.||++||+++|+++
T Consensus 244 ---------~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 244 ---------RIMCLHSKIKSQALEFPD----QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ---------SHHHHHHHHHHCCCCCCS----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---------cHHHHHHHHhcccCCCCC----ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 122233333332222211 1123355788899999999999999999874
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=348.43 Aligned_cols=252 Identities=23% Similarity=0.410 Sum_probs=205.6
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|+..++..||||++..... ..+++.+|+.++++++||||+++++++.+.+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 457999999999999999999998888999999975322 24678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS- 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 846 (964)
|+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.++......
T Consensus 100 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 100 YMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp CCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 999999999997533 3489999999999999999999999 99999999999999999999999999998664332
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.......+++.|+|||.+.+..++.++||||+|+++|||+| |+.||.... ..+....+........
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-----------~~~~~~~~~~~~~~~~-- 242 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-----------NSETAEHIAQGLRLYR-- 242 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-----------HHHHHHHHHTTCCCCC--
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC-----------hhHHHHHHhcccCCCC--
Confidence 11223456788999999998899999999999999999998 999975322 2233333333221111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+.+++.+||+.||++|||++++++.|+
T Consensus 243 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 243 ---PHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp ---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 0112345788999999999999999999999885
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=367.52 Aligned_cols=347 Identities=27% Similarity=0.362 Sum_probs=193.1
Q ss_pred CcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEE
Q 037111 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNL 160 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L 160 (964)
..+++++.|+++++.++. +| .+..+++|++|+|++|.+++. |. ++.+++|++|++++|.+++..+ ++.+++|++|
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L 117 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGL 117 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEE
T ss_pred hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh-hcCCCCCCEE
Confidence 345677777777777764 44 366777777777777777743 33 6777777777777777776655 6677777777
Q ss_pred EcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 161 ALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 161 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
+|++|++++..+ ++++++|++|++++|.+++ +| .++++++|++|+++ |.+.+..+ +..+++|++|++++|.++
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCC
Confidence 777777765432 6677777777777777664 23 36666667766664 44443322 666666666666666666
Q ss_pred CCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccc
Q 037111 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320 (964)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 320 (964)
+. ..+..+++|++|++++|.+++..| +..+++|++|++++|++++. ..+..+++|+.|++++|.+++..+
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~---- 260 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP---- 260 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG----
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh----
Confidence 43 235666666666666666664433 45556666666666666532 245555555555555555554322
Q ss_pred cCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceE
Q 037111 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGIL 400 (964)
Q Consensus 321 ~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L 400 (964)
+..+++|+.|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|+.|
T Consensus 261 ----------------------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 314 (466)
T 1o6v_A 261 ----------------------LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYL 314 (466)
T ss_dssp ----------------------GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEE
T ss_pred ----------------------hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEE
Confidence 3444445555555555444332 4444555555555555443322 3334444444
Q ss_pred eecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccc
Q 037111 401 KIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS 480 (964)
Q Consensus 401 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 480 (964)
++++|.+++..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 315 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 315 TLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred ECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 444444443322 34444555555555554432 234444555555555555544433 444445555555555444
Q ss_pred c
Q 037111 481 K 481 (964)
Q Consensus 481 ~ 481 (964)
+
T Consensus 389 ~ 389 (466)
T 1o6v_A 389 N 389 (466)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-39 Score=355.11 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=208.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++.... ........+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 468999999999999999999765 68999999986432 1223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 99999999999997653 489999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----------~~~~~~~~~i~~~~~~~p-- 258 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA-----------DQPIQIYEKIVSGKVRFP-- 258 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC--
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC-----------CCHHHHHHHHHcCCCCCC--
Confidence 2345799999999999999999999999999999999999999852 223345555555444322
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPN-----MQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl~ 959 (964)
......+.+++.+||+.||++||+ +++|++
T Consensus 259 ----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 259 ----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ----CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 123455788899999999999998 788764
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=363.06 Aligned_cols=255 Identities=24% Similarity=0.393 Sum_probs=207.7
Q ss_pred hhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|+..+.||+|+||+||+|++. +++.||||+++.. ........+.+|+.++++++||||+++++++.+...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 357999999999999999999743 4668999998643 234445678899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceEE
Q 037111 762 SFLVYEYLERGSLARILSSETA-----TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAHV 833 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~kl 833 (964)
.++||||+++|+|.+++..... ..+++..++.++.||++||+|||++ +|+||||||+||+++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999976432 3588999999999999999999999 999999999999999555 5999
Q ss_pred eccCcccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhH
Q 037111 834 SDFGTAKLLKPDS--SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 834 ~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+|||+++...... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.. ....+
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~-----------~~~~~ 294 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-----------KSNQE 294 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-----------CCHHH
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----------CCHHH
Confidence 9999997543221 22234567899999999999999999999999999999998 9999753 22334
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+........ ...++..+.+++.+||+.||++||++++|++.|+
T Consensus 295 ~~~~i~~~~~~~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 295 VLEFVTSGGRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCC-----CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 4444433322211 1223456888999999999999999999999874
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-39 Score=358.05 Aligned_cols=252 Identities=23% Similarity=0.397 Sum_probs=206.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.... ........+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 468999999999999999999765 68899999986432 2233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+.||+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999999653 4589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 846 SSNWSELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ....+....+.......
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~--------~~~~~~~~~~~~~~~~~ 239 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS--------TSSKEIVHTFETTVVTY 239 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT--------SCHHHHHHHHHHCCCCC
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC--------ccHHHHHHHHhhcccCC
Confidence 33456689999999999874 4589999999999999999999999863221 12223333333332222
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-~~evl~ 959 (964)
+ ......+.+++.+||+.||++||+ ++++.+
T Consensus 240 p------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 240 P------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp C------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred C------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1 123356788899999999999998 677653
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=353.76 Aligned_cols=251 Identities=19% Similarity=0.387 Sum_probs=202.2
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-----
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----- 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 760 (964)
..++|+..+.||+|+||.||+|+.+ +|+.||||++.... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 4568999999999999999999876 79999999987533 3445578999999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEEeccCCCHHHHhhhcCC-CCCC
Q 037111 761 ----------------------------------------------------HSFLVYEYLERGSLARILSSETA-TEMD 787 (964)
Q Consensus 761 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~-~~l~ 787 (964)
..++||||+++|+|.+++..... ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 37999999999999999976432 2356
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC------------Cccccccc
Q 037111 788 WSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS------------NWSELAGT 855 (964)
Q Consensus 788 ~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~g~ 855 (964)
+..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 667899999999999999999 999999999999999999999999999987765421 22345699
Q ss_pred cccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHH
Q 037111 856 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKS 935 (964)
Q Consensus 856 ~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (964)
+.|+|||.+.+..++.++||||+|+++|||++|..|+.. .............+. ........
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------------~~~~~~~~~~~~~~~-----~~~~~~~~ 301 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------------RVRIITDVRNLKFPL-----LFTQKYPQ 301 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------------HHHHHHHHHTTCCCH-----HHHHHCHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------------HHHHHHHhhccCCCc-----ccccCChh
Confidence 999999999999999999999999999999998776421 112222222332221 22344566
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHH
Q 037111 936 IIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 936 l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+.+++.+||+.||++|||++|+++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCCCHHHHhh
Confidence 788999999999999999999986
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=348.27 Aligned_cols=257 Identities=26% Similarity=0.442 Sum_probs=198.7
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||+||+|+.. ..||||+++.........+.+.+|+.++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 457999999999999999999864 4699999976655666677899999999999999999999965 4566899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC--
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD-- 845 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 845 (964)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999996543 4589999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 846 SSNWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
........|++.|+|||.+. +..++.++||||+|+++|||++|+.||..... .......+......+
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----------~~~~~~~~~~~~~~~ 245 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN----------RDQIIEMVGRGSLSP 245 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC----------HHHHHHHHHHTSCCC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch----------HHHHHHHhcccccCc
Confidence 22234457899999999986 66788999999999999999999999853221 122222222222222
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
. .......++..+.+++.+||+.||++|||++++++.|+
T Consensus 246 ~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 246 D-LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp C-TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred c-hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 2 11222345567889999999999999999999999886
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=359.36 Aligned_cols=247 Identities=25% Similarity=0.297 Sum_probs=198.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHH-HhCCCCCceeeEEeeeecCceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKA-LTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
.++|+..+.||+|+||.||+|+.+ +++.||||++..... .......+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 468999999999999999999765 588899999975432 22334556677776 577899999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||++||+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999997643 488899999999999999999999 999999999999999999999999999987554
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-----------~~~~~~~~~i~~~~~~~~- 259 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS-----------RNTAEMYDNILNKPLQLK- 259 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC-----------SBHHHHHHHHHHSCCCCC-
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC-----------CCHHHHHHHHHhcccCCC-
Confidence 44455567899999999999999999999999999999999999999852 223345555554433321
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQI 956 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~e 956 (964)
......+.+++.+||+.||++||++.+
T Consensus 260 -----~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 260 -----PNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp -----SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred -----CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 122345778888999999999999853
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=361.85 Aligned_cols=204 Identities=20% Similarity=0.291 Sum_probs=180.8
Q ss_pred hhcccccceeecC--CceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 688 INNFDESFCIGRG--GYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
.++|++.+.||+| +||.||+|+.+ +++.||||++............+.+|+.+++.++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999765 79999999997655555566788899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999877666799999999999999999999999 999999999999999999999999998865432
Q ss_pred CC-------CCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 845 DS-------SNWSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 845 ~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
.. .......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||..
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 21 11223468899999999987 6799999999999999999999999864
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-39 Score=376.83 Aligned_cols=254 Identities=24% Similarity=0.401 Sum_probs=210.4
Q ss_pred hhcccccceeecCCceeEEEEEeCC-CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
..+|+..+.||+|+||.||+|.++. +..||||+++... ...++|.+|+.++++++||||++++++|.+....++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 3568899999999999999998764 7899999987432 23578999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 999999999999876666799999999999999999999999 99999999999999999999999999998765432
Q ss_pred C-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 847 S-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 847 ~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......+++.|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+....+... ...+
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----------~~~~~~~~~~~-~~~~- 439 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----------LSQVYELLEKD-YRME- 439 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------GGGHHHHHHTT-CCCC-
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHcC-CCCC-
Confidence 2 1223346788999999999999999999999999999999 889975322 12222222211 1111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....++..+.+++.+||+.||++|||+++|++.|+.
T Consensus 440 ---~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 475 (495)
T 1opk_A 440 ---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 475 (495)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 112344668889999999999999999999999864
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-39 Score=351.24 Aligned_cols=256 Identities=21% Similarity=0.345 Sum_probs=190.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|..+ +|+.||+|++.... .......+.+|+.++++++||||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 467999999999999999999765 68999999987533 2233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 767 EYLERGSLARILSSET----ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
||++ |+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 59999987532 23588999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc----
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---- 917 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---- 917 (964)
...........||+.|+|||.+.+ ..++.++||||+||++|||++|+.||..... .+....+..
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~i~~~~~~ 227 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-----------EEQLKLIFDIMGT 227 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHHHCS
T ss_pred CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHHHHhCC
Confidence 655444455678999999999876 4689999999999999999999999853321 111111110
Q ss_pred ----------------cCCCC----Cc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ----------------ARLPP----PW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ----------------~~~~~----~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+.. .. ..........++.+++.+||..||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 228 PNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000 00 00000122346888999999999999999999875
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-39 Score=351.68 Aligned_cols=255 Identities=25% Similarity=0.407 Sum_probs=209.0
Q ss_pred hhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|++.+.||+|+||.||+|.. .+++.||||++... ......+.+.+|+.++++++||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 45799999999999999999965 24578999998743 334455788999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCC
Q 037111 762 SFLVYEYLERGSLARILSSETA----------------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVS 819 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlk 819 (964)
.++||||+++|+|.+++..... ..+++..+..++.||++||+|||++ +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 9999999999999999976432 3478999999999999999999999 99999999
Q ss_pred CCCeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccc
Q 037111 820 SKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLS 896 (964)
Q Consensus 820 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~ 896 (964)
|+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876544322 223456789999999999889999999999999999999 999975322
Q ss_pred cccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 897 SLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+....+.....+.. ....+..+.+++.+||+.||++||+++++++.|+
T Consensus 258 -----------~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 258 -----------PERLFNLLKTGHRMER-----PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp -----------GGGHHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----------HHHHHHHhhcCCcCCC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1222222222221111 1233456888999999999999999999999885
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=372.24 Aligned_cols=252 Identities=27% Similarity=0.453 Sum_probs=204.3
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|.++.+..||||+++... ...+.|.+|+.++++++||||+++++++.+ +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 35788999999999999999999877889999987532 234679999999999999999999999976 67899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 99999999999765445689999999999999999999999 999999999999999999999999999987654322
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC-CCCCc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR-LPPPW 924 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 924 (964)
......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.. ....+....+.... .+.+
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~-----------~~~~~~~~~i~~~~~~~~~- 403 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVNREVLDQVERGYRMPCP- 403 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT-----------CCHHHHHHHHHTTCCCCCC-
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHcCCCCCCC-
Confidence 2223456789999999999999999999999999999999 8999742 22233343333221 2211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..++..+.+++.+||+.||++|||++++++.|+.
T Consensus 404 -----~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~ 437 (452)
T 1fmk_A 404 -----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437 (452)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 2345668889999999999999999999998863
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=349.71 Aligned_cols=246 Identities=22% Similarity=0.262 Sum_probs=197.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||+||+|+.+ +++.||||++............+..|+..+.++ +||||++++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999776 799999999875544444455566666665554 8999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp ECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 999 669999987654 4599999999999999999999999 99999999999999999999999999997765432
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+... .....+.....++.
T Consensus 212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~--------------~~~~~~~~~~~~~~--- 272 (311)
T 3p1a_A 212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG--------------EGWQQLRQGYLPPE--- 272 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH--------------HHHHHHTTTCCCHH---
T ss_pred -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc--------------cHHHHHhccCCCcc---
Confidence 2334568999999998876 7999999999999999999997664321 12222222222211
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||++||++|||++|+++
T Consensus 273 -~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 -FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11223456888999999999999999999986
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-39 Score=353.18 Aligned_cols=250 Identities=25% Similarity=0.346 Sum_probs=185.5
Q ss_pred cceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEEEeccC
Q 037111 694 SFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
.+.||+|+||.||+|..+ +++.||||++... ....+.+|+.+++.+. ||||+++++++.++...|+||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 378999999999999765 6899999998632 3456778999999997 99999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceEEeccCcccccCCCCCC
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~ 848 (964)
|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++........
T Consensus 91 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 91 GELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp CBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 9999999764 3589999999999999999999999 999999999999998766 8999999999877655555
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||...... .......+....+.....+.+ ...
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~~~~~~~~i~~~~~~~~--~~~ 239 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRS----LTCTSAVEIMKKIKKGDFSFE--GEA 239 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------CCCHHHHHHHHTTTCCCCC--SHH
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccc----cccccHHHHHHHHHcCCCCCC--ccc
Confidence 55667899999999999999999999999999999999999998643321 112223345555555444322 112
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......++.+++.+||+.||++|||++++++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 2334567888999999999999999998863
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-38 Score=364.07 Aligned_cols=344 Identities=27% Similarity=0.408 Sum_probs=267.8
Q ss_pred CCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEE
Q 037111 59 GRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138 (964)
Q Consensus 59 ~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 138 (964)
.+++.+++.++++.. ++. +..+++|++|||++|.+++..| ++++++|++|+|++|.+++..| ++.+++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~~--~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-IDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Ccc--hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 468889999887764 332 5678999999999999997544 9999999999999999996544 99999999999
Q ss_pred ccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCC
Q 037111 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGP 218 (964)
Q Consensus 139 l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 218 (964)
+++|.+++..+ +..+++|++|++++|.+++. | .++.+++|++|+++ |.+.+.. .++++++|++|++++|.+++.
T Consensus 119 L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 119 LFNNQITDIDP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp CCSSCCCCCGG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCCChH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC
Confidence 99999998765 99999999999999999963 3 58999999999997 5565443 399999999999999999865
Q ss_pred ccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccC
Q 037111 219 IPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF 298 (964)
Q Consensus 219 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 298 (964)
..+..+++|++|++++|.+++..| ++.+++|++|++++|++++ + ..+..+++|+.|++++|++++..+ +..+
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred --hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 358899999999999999997765 8889999999999999985 3 468899999999999999996554 8899
Q ss_pred ccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEc
Q 037111 299 MNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDL 378 (964)
Q Consensus 299 ~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 378 (964)
++|+.|++++|++++..+ +..+++|+.|++++|.+.+..+ +..+ ++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l------------------------~~L~~L~L 316 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNL------------------------KNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGC------------------------TTCSEEEC
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCC------------------------CCCCEEEC
Confidence 999999999999987543 5555555555555555544332 4444 44555555
Q ss_pred cCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccC
Q 037111 379 SYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSG 457 (964)
Q Consensus 379 s~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 457 (964)
++|++++..+ +..+++|+.|++++|.+++. ..+.++++|++|++++|++++..| +..+++|+.|++++|.+++
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 5555444333 34455555555555555543 356667777777777777776655 6677777777777777774
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-39 Score=344.34 Aligned_cols=255 Identities=27% Similarity=0.434 Sum_probs=196.2
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCc--hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE--TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|... ++.||||++...... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457999999999999999999875 889999998653222 23346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC--------CCceEEeccC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF--------EYEAHVSDFG 837 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~--------~~~~kl~Dfg 837 (964)
|||+++|+|.+++.. ..+++..+..++.|+++|++|||++...+|+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999853 35899999999999999999999991112999999999999986 6789999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
.+........ ....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ..........
T Consensus 162 ~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----------~~~~~~~~~~ 228 (271)
T 3dtc_A 162 LAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-----------GLAVAYGVAM 228 (271)
T ss_dssp C---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-----------HHHHHHHHHT
T ss_pred cccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHhhhc
Confidence 9986554322 24578999999999999999999999999999999999999985322 2222233322
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.....+. ....+..+.+++.+||+.||++|||++|+++.|+.
T Consensus 229 ~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 229 NKLALPI----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp SCCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CCCCCCC----CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 2222211 12334568889999999999999999999999874
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=356.07 Aligned_cols=248 Identities=22% Similarity=0.314 Sum_probs=201.8
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999976 5789999999864321 122235788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+ +|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp ECCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 9999 679999986653 489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......||+.|+|||.+.+..+ +.++||||+||++|+|++|+.||+....... ...+.......+
T Consensus 162 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----------~~~i~~~~~~~p- 228 (336)
T 3h4j_B 162 N-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----------FKKVNSCVYVMP- 228 (336)
T ss_dssp B-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----------BCCCCSSCCCCC-
T ss_pred c-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----------HHHHHcCCCCCc-
Confidence 2 2345679999999999988776 6899999999999999999999864322111 001111111111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||..||++|||++|+++
T Consensus 229 -----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 229 -----DFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp -----TTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred -----ccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 122345778899999999999999999875
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=343.07 Aligned_cols=253 Identities=31% Similarity=0.491 Sum_probs=203.0
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhH-----HHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQ-----KEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
++|+..+.||+|+||+||+|+. .+++.||||++.......... +.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5799999999999999999976 478999999986533222211 67899999999999999999999997655
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEECCCCc-----eEEec
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLDFEYE-----AHVSD 835 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~~~~~-----~kl~D 835 (964)
++||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ + |+||||||+||+++.++. +||+|
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 69999999999999886543 4589999999999999999999999 8 999999999999988876 99999
Q ss_pred cCcccccCCCCCCccccccccccccccccc--cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 836 FGTAKLLKPDSSNWSELAGTYGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 836 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
||+++.... ......|++.|+|||.+. ...++.++||||+|+++|||++|+.||..... .......
T Consensus 173 fg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~---------~~~~~~~ 240 (287)
T 4f0f_A 173 FGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY---------GKIKFIN 240 (287)
T ss_dssp CTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC---------CHHHHHH
T ss_pred CCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc---------cHHHHHH
Confidence 999975433 234567899999999984 45578999999999999999999999863221 1112222
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
........+.. ....+..+.+++.+||+.||++|||++++++.|+.
T Consensus 241 ~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 241 MIREEGLRPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHHHSCCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHhccCCCCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 22222222221 12334568889999999999999999999999874
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-39 Score=353.88 Aligned_cols=256 Identities=22% Similarity=0.376 Sum_probs=193.1
Q ss_pred hhcccccceeecCCceeEEEEEeCCCC----eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee-
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS- 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 762 (964)
.++|+..+.||+|+||.||+|+..... .||||+++.........+.+.+|+.++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 457999999999999999999765432 799999876544555567899999999999999999999999877654
Q ss_pred -----EEEEEeccCCCHHHHhhhcC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 763 -----FLVYEYLERGSLARILSSET----ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 763 -----~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 99999999999999996532 22589999999999999999999999 9999999999999999999999
Q ss_pred eccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhH
Q 037111 834 SDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----------~~~ 247 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE-----------NAE 247 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------GGG
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC-----------hHH
Confidence 99999987654332 1223456789999999999999999999999999999999 899975322 223
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+......+. ....+..+.+++.+||+.||++|||+.++++.|+
T Consensus 248 ~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 248 IYNYLIGGNRLKQ-----PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp HHHHHHTTCCCCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCC-----CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 3333333222211 1223456888999999999999999999999885
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=355.99 Aligned_cols=252 Identities=19% Similarity=0.283 Sum_probs=207.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.+.|++.+.||+|+||.||+|..+ +|+.||+|++... .......+.+|+.++++++||||+++++++.+....++||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999765 6889999998643 2334467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC--CCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF--EYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~ 844 (964)
||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 128 E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 128 EFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp ECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred EcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 9999999999996543 3589999999999999999999999 9999999999999974 47899999999987654
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+....+.......+
T Consensus 204 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----------~~~~~~~~i~~~~~~~~- 270 (387)
T 1kob_A 204 DE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-----------DDLETLQNVKRCDWEFD- 270 (387)
T ss_dssp TS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----------SHHHHHHHHHHCCCCCC-
T ss_pred Cc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC-----------CHHHHHHHHHhCCCCCC-
Confidence 43 234457999999999999999999999999999999999999998532 22233333333322211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........++.+++.+||..||++|||++++++
T Consensus 271 -~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 271 -EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp -SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred -ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 1111234456788999999999999999999986
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=368.81 Aligned_cols=259 Identities=21% Similarity=0.315 Sum_probs=207.8
Q ss_pred HHHHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeec
Q 037111 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH 758 (964)
Q Consensus 681 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 758 (964)
+.++....++|+..+.||+|+||+||+|+.+ +++.||+|++.+... .......+.+|+.++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444455689999999999999999999876 478899999864211 11122347889999999999999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
++..|+||||++||+|.+++... ...+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999999753 24589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC-ccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 839 AKLLKPDSSN-WSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 839 a~~~~~~~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
|+........ .....||+.|+|||++. ...++.++|||||||++|||++|+.||... ...+..
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-----------~~~~~~ 290 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----------SLVETY 290 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-----------SHHHHH
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-----------ChhHHH
Confidence 9776544332 23467999999999987 556899999999999999999999998532 223333
Q ss_pred Hhhhc----cCCCCCccccchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 037111 913 DHMFD----ARLPPPWLEVGVEDKLKSIIEVALSCVDANPER--RPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPs~~evl~ 959 (964)
..+.. ..++... .....++.+++.+|+..+|++ ||+++|+++
T Consensus 291 ~~i~~~~~~~~~p~~~-----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 291 GKIMNHKERFQFPTQV-----TDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHTHHHHCCCCSSC-----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred HhhhhccccccCCccc-----ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 33332 2222211 123345778888999888888 999999875
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=348.76 Aligned_cols=259 Identities=23% Similarity=0.364 Sum_probs=200.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|+.. +|+.||||++..........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 367999999999999999999765 5899999998765555555677889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp ECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 999999999988544 3489999999999999999999999 99999999999999999999999999998776555
Q ss_pred CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh---------
Q 037111 847 SNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF--------- 916 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------- 916 (964)
.......|++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ...+.+..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 228 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ--------LYLIRKTLGDLIPRHQQ 228 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--------HHHHHHHHCSCCHHHHH
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHHHHhccccccccc
Confidence 44556678999999999876 5689999999999999999999999854322100 00000000
Q ss_pred ---------ccCCCCCc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 ---------DARLPPPW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ---------~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+.+. ...........+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 229 VFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 01111110 00011234456888999999999999999999975
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=341.30 Aligned_cols=253 Identities=20% Similarity=0.316 Sum_probs=209.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|..+ +++.||+|++............+.+|+.++++++||||+++++++.+++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 367999999999999999999764 6889999999765555556678899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc---eEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE---AHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~a~~~~ 843 (964)
||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.+....
T Consensus 85 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999987653 488999999999999999999999 9999999999999987655 9999999997665
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.. .........+.......+
T Consensus 160 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~-----------~~~~~~~~~~~~~~~~~~ 227 (284)
T 3kk8_A 160 DSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD-----------EDQHRLYAQIKAGAYDYP 227 (284)
T ss_dssp SSC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCCC
T ss_pred cCc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC-----------CchhHHHHHHHhccccCC
Confidence 432 23456789999999999999999999999999999999999999753 222233333333332211
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .........+.+++.+||++||++|||++|+++
T Consensus 228 ~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 228 S--PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp T--TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c--hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1 111233456788999999999999999999976
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=363.37 Aligned_cols=262 Identities=23% Similarity=0.376 Sum_probs=208.0
Q ss_pred HHHHHHhhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEe
Q 037111 682 EEIIRSINNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYG 754 (964)
Q Consensus 682 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 754 (964)
.+.....++|++.+.||+|+||.||+|++ .+++.||||+++.. ......+.+.+|+.+++++ +||||+++++
T Consensus 15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 34444567899999999999999999963 34678999999753 2334456799999999999 7999999999
Q ss_pred eeecCc-eeEEEEEeccCCCHHHHhhhcCC--------------------------------------------------
Q 037111 755 FCSHAR-HSFLVYEYLERGSLARILSSETA-------------------------------------------------- 783 (964)
Q Consensus 755 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------- 783 (964)
++.+.+ ..++||||+++|+|.+++.....
T Consensus 94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (359)
T 3vhe_A 94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL 173 (359)
T ss_dssp EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence 998765 58999999999999999976432
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC--
Q 037111 784 --------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS-- 847 (964)
Q Consensus 784 --------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 847 (964)
..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 250 (359)
T 3vhe_A 174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 250 (359)
T ss_dssp ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence 1288899999999999999999999 999999999999999999999999999986644332
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......||+.|+|||++.+..++.++||||||+++|||+| |+.||..... .......+........
T Consensus 251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----------~~~~~~~~~~~~~~~~--- 317 (359)
T 3vhe_A 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----------DEEFCRRLKEGTRMRA--- 317 (359)
T ss_dssp EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----------SHHHHHHHHHTCCCCC---
T ss_pred hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch----------hHHHHHHHHcCCCCCC---
Confidence 2234567889999999999999999999999999999998 9999853221 1112222222111111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+.+++.+||+.||++|||+++|++.|+
T Consensus 318 --~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 318 --PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 1123345788899999999999999999999886
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=355.46 Aligned_cols=255 Identities=19% Similarity=0.248 Sum_probs=206.3
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+|+.+++++ +||||+++++++..++..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 5799999999999999999975 5788999999864322 23578899999999 8999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc-----eEEeccCcccc
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE-----AHVSDFGTAKL 841 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~-----~kl~Dfg~a~~ 841 (964)
||+ +|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 85 ELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 999 89999999764 34599999999999999999999999 9999999999999999887 99999999987
Q ss_pred cCCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 842 LKPDSSN-------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 842 ~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
....... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ....+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~--------~~~~~~~~~ 231 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA--------DTLKERYQK 231 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------SSHHHHHHH
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc--------ccHHHHHHH
Confidence 6543321 2356799999999999999999999999999999999999999864321 122233333
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.....+.+. .......+ ++.+++.+||+.||++||++++|++.|+
T Consensus 232 i~~~~~~~~~-~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 232 IGDTKRATPI-EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHHHHHSCH-HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHhhhccCCH-HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 3222211110 00011123 7889999999999999999999999885
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=344.13 Aligned_cols=253 Identities=23% Similarity=0.375 Sum_probs=195.1
Q ss_pred hhcccccceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|+..+.||+|+||.||+|.... +..||+|++... ......+.+.+|+.++++++||||+++++++. ++..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 4679999999999999999997643 446999998653 23445577999999999999999999999985 46789
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccC
Confidence 9999999999999997543 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 844 PDSS-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 844 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.... ..+....+......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~-----------~~~~~~~i~~~~~~ 236 (281)
T 1mp8_A 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----------NNDVIGRIENGERL 236 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------GGGHHHHHHTTCCC
T ss_pred cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC-----------HHHHHHHHHcCCCC
Confidence 4322 2233456789999999998899999999999999999997 899985322 12333333332221
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+. ....+..+.+++.+||+.||++|||+.++++.|+
T Consensus 237 ~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 237 PM-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11 1233456888999999999999999999999885
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=345.89 Aligned_cols=260 Identities=23% Similarity=0.384 Sum_probs=200.4
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ........+.+|+.++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 346799999999999999999975 578999999987532 334456788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 765 VYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
||||+++|+|.+++.. .....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999965 2345589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
...........|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... .........+.....++
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~ 257 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---------MNLYSLCKKIEQCDYPP 257 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC------------CCHHHHHHHHHTTCSCC
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc---------hhHHHHHHHhhcccCCC
Confidence 654444445678999999999999999999999999999999999999985321 11223333333333332
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.. .......+.+++.+||+.||++|||+++|++.|+
T Consensus 258 ~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 258 LP----SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp CC----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc----ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11 1223456888999999999999999999999885
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-39 Score=368.32 Aligned_cols=250 Identities=21% Similarity=0.287 Sum_probs=199.4
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 56899999999999999999975 478999999987432 2233345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999997654 48999999999999999999998 7 999999999999999999999999999987555
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----------~~~~~~~~~i~~~~~~~p- 369 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-----------QDHEKLFELILMEEIRFP- 369 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC-
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC-----------CCHHHHHHHHHhCCCCCC-
Confidence 54555567899999999999999999999999999999999999999752 223344444444433322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
......+.+++.+||+.||++|| +++|+++
T Consensus 370 -----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 370 -----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 12335578889999999999999 9999875
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=341.36 Aligned_cols=251 Identities=23% Similarity=0.380 Sum_probs=208.2
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|+||.||+|...+++.||+|++..... ..+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 57899999999999999999988888999999975332 346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-C
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS-S 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 847 (964)
+++|+|.+++.... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||.+....... .
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 85 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp CTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 99999999997643 3588999999999999999999999 99999999999999999999999999998664321 1
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||... ...+....+........
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----------~~~~~~~~i~~~~~~~~--- 226 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----------SNSEVVEDISTGFRLYK--- 226 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----------CHHHHHHHHHTTCCCCC---
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC-----------CHHHHHHHHhcCCcCCC---
Confidence 1223456788999999998899999999999999999999 89997532 22333333333221111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+.+++.+||+.||++||+++++++.|+
T Consensus 227 --~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 227 --PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1123456788999999999999999999999885
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=350.51 Aligned_cols=254 Identities=24% Similarity=0.409 Sum_probs=211.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|+..+.||+|+||.||+|..+ ++..||+|++.. .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS---CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 4567999999999999999999765 478899999864 233457789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+......
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 9999999999999887777799999999999999999999999 9999999999999999999999999999876544
Q ss_pred CC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 846 SS-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 846 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.. ......+++.|+|||.+.+..++.++||||+|+++|+|++ |..||.... .......+........
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~ 233 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----------LSQVYELLEKDYRMER 233 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------GGGHHHHHHTTCCCCC
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHhccCCCCC
Confidence 32 2233456788999999999999999999999999999999 889975322 1122222222111111
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+..+.+++.+||+.||++|||++++++.|+
T Consensus 234 -----~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 1223456888999999999999999999999885
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=345.42 Aligned_cols=256 Identities=24% Similarity=0.375 Sum_probs=208.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee--cCceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS--HARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 764 (964)
.++|+..+.||+|+||.||+|+.+ +++.||+|++..........+.+.+|+.++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999765 7899999999765545556678999999999999999999999874 4568999
Q ss_pred EEEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-----eEeccCCCCCeEECCCCceEEeccC
Q 037111 765 VYEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPP-----IVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
||||+++|+|.+++... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999999753 334589999999999999999999998 7 9999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
.++.............|++.|+|||.+.+..++.++||||||+++|+|++|+.||... ...+....+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----------~~~~~~~~i~~ 230 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-----------SQKELAGKIRE 230 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHH
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc-----------CHHHHHHHHhh
Confidence 9987654433334457899999999999989999999999999999999999997532 22233334433
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+.. ....+..+.+++.+||+.||++||+++|+++.+.
T Consensus 231 ~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 231 GKFRRI-----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp TCCCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred cccccC-----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 333211 1123456888999999999999999999998653
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=350.52 Aligned_cols=256 Identities=25% Similarity=0.422 Sum_probs=208.9
Q ss_pred hhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 760 (964)
.++|+..+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++.+++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 35799999999999999999974 356789999987532 334457899999999999 8999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCC----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 761 HSFLVYEYLERGSLARILSSETA----------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
..++||||+++|+|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 99999999999999999976542 2489999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---- 253 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV---- 253 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS----
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc----
Confidence 999999999999999876654332 223457789999999999999999999999999999999 9999753221
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
................ ....+..+.+++.+||+.||++|||++++++.|+
T Consensus 254 -------~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 303 (313)
T 1t46_A 254 -------DSKFYKMIKEGFRMLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (313)
T ss_dssp -------SHHHHHHHHHTCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------hhHHHHHhccCCCCCC----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1112222222221111 1123456888999999999999999999999986
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=363.47 Aligned_cols=249 Identities=24% Similarity=0.377 Sum_probs=208.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|...+.||+|+||.||+|+.. +|+.||||++..... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 467999999999999999999765 799999999864321 223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 95 MEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999999653 4589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+.. ........+.......+.
T Consensus 170 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-----------~~~~~~~~i~~~~~~~p~ 237 (476)
T 2y94_A 170 E-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD-----------HVPTLFKKICDGIFYTPQ 237 (476)
T ss_dssp C-CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS-----------SSHHHHHHHHTTCCCCCT
T ss_pred c-cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC-----------CHHHHHHHHhcCCcCCCc
Confidence 2 2345679999999999988776 68999999999999999999998632 223444455444433221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+.+++.+||..||++|||++++++
T Consensus 238 ------~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 238 ------YLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ------TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 12345778899999999999999999985
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=342.98 Aligned_cols=252 Identities=23% Similarity=0.388 Sum_probs=184.6
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
..++|++.+.||+|+||.||+|+. .+|+.||||++..... .......+.+|+.++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 356899999999999999999976 5789999999864321 22234678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++++|.+++.... ..+++..+..++.|+++|++|||++ +++||||||+||+++.++.+||+|||.+.....
T Consensus 89 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999999997543 4589999999999999999999999 999999999999999999999999999987664
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... +............+
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~- 232 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-----------NTLNKVVLADYEMP- 232 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------CCSSCCCCC-
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-----------HHHHHHhhcccCCc-
Confidence 444444567899999999999988999999999999999999999998643221 11111111111111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....++.+++.+||+.||++||+++++++
T Consensus 233 -----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 233 -----SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 112345778999999999999999999975
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=354.11 Aligned_cols=249 Identities=22% Similarity=0.306 Sum_probs=200.6
Q ss_pred ccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|...+.||+|+||.||+|.. .+|+.||+|+++.. .....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 34467899999999999975 46899999998743 2344578999999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE--CCCCceEEeccCcccccCCCCC
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL--DFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill--~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++.......
T Consensus 169 ~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 169 DGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp TTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 9999999986543 3488999999999999999999999 99999999999999 6678999999999987654432
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+. .
T Consensus 245 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~-----------~~~~~~~~~i~~~~~~~~~--~ 310 (373)
T 2x4f_A 245 -LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG-----------DNDAETLNNILACRWDLED--E 310 (373)
T ss_dssp -CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHHTCCCSCS--G
T ss_pred -cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhccCCCCh--h
Confidence 3345799999999999988999999999999999999999999753 2233444555444433221 1
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||..||++|||++|+++
T Consensus 311 ~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 311 EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 12234456888999999999999999999986
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=354.14 Aligned_cols=252 Identities=23% Similarity=0.278 Sum_probs=196.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|+.+ +++.||||++..... ....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 457999999999999999999765 789999999865322 2356789999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc--eEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE--AHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~a~~~~~ 844 (964)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++....
T Consensus 96 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 96 EYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 9999999999996644 489999999999999999999999 9999999999999987765 99999999975432
Q ss_pred CCCCccccccccccccccccccCCCCcc-hhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~-sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.. ......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||..... ..........+.......+
T Consensus 171 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~~~~~~~~~~~~~~ 242 (361)
T 3uc3_A 171 HS-QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE-------PRDYRKTIQRILSVKYSIP 242 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-----------CCCHHHHHHHHHTTCCCCC
T ss_pred cC-CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc-------HHHHHHHHHHHhcCCCCCC
Confidence 22 2234579999999999988887765 8999999999999999999864322 1222344444444333322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. ......+.+++.+||..||++|||+.|+++
T Consensus 243 ~~----~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 243 DD----IRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp TT----SCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred Cc----CCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 11 112345778899999999999999999975
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=347.42 Aligned_cols=256 Identities=17% Similarity=0.242 Sum_probs=206.7
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+|+..++.+ +|++++++++++.++...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 5799999999999999999975 5789999999864322 23577899999998 7999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc-----eEEeccCcccc
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE-----AHVSDFGTAKL 841 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~-----~kl~Dfg~a~~ 841 (964)
||+ +|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++. +||+|||+++.
T Consensus 86 e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 999 899999997643 3489999999999999999999999 9999999999999988776 99999999987
Q ss_pred cCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 842 LKPDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 842 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ....+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~~~~~~~~ 232 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA--------ATNKQKYER 232 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS--------CCHHHHHHH
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc--------cccHHHHHH
Confidence 654432 12345799999999999999999999999999999999999999864322 112222222
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.....+.+. .......+..+.+++.+||+.||++||++++|++.|+
T Consensus 233 ~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 233 IGEKKQSTPL-RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHHHHHHSCH-HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHhhccCccH-HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 2222111110 1111234467889999999999999999999999885
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=367.32 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=208.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++..... .......+..|+.++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999775 699999999864321 223346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 766 YEYLERGSLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
|||++||+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999997643 44689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....+....+.......+
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~-------~~~~~~~~~~i~~~~~~~p 413 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-------KVENKELKQRVLEQAVTYP 413 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC-------CCCHHHHHHHHHHCCCCCC
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc-------chhHHHHHHHHhhcccCCC
Confidence 555444556899999999999999999999999999999999999999864321 1122334444444333221
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
......+.+++.+||..||++||++
T Consensus 414 ------~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 414 ------DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ------TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred ------cccCHHHHHHHHHhccCCHhHCCCC
Confidence 1234557788889999999999975
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=353.18 Aligned_cols=265 Identities=18% Similarity=0.267 Sum_probs=193.7
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||+||+|+.. +++.||||++..... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 57999999999999999999765 789999999864321 1111245579999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 81 YLDK-DLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred cccc-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 9975 9999987653 3588999999999999999999999 999999999999999999999999999987665544
Q ss_pred Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-------------CCCCCCCChhHHHH
Q 037111 848 NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS-------------DSSLPGANMNEAID 913 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~-------------~~~~~~~~~~~~~~ 913 (964)
......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||....... ...++.........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhc
Confidence 4556678999999999876 568999999999999999999999986432110 00000000000000
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....................++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000000000111123456788999999999999999999975
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=352.50 Aligned_cols=250 Identities=20% Similarity=0.292 Sum_probs=190.5
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|+.+ +++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 457999999999999999999775 57889999987432 2356788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~a~~~~ 843 (964)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 128 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 128 ELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp CCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred EeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 999999999999654 3489999999999999999999999 9999999999999975 8899999999998664
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........+........
T Consensus 203 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----------~~~~~~~~i~~~~~~~~ 271 (349)
T 2w4o_A 203 HQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER----------GDQFMFRRILNCEYYFI 271 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT----------CHHHHHHHHHTTCCCCC
T ss_pred ccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc----------ccHHHHHHHHhCCCccC
Confidence 332 2335578999999999999999999999999999999999999985322 11223334433332211
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........++.+++.+||..||++|||+.++++
T Consensus 272 --~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 272 --SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp --TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111234456788999999999999999999986
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-38 Score=345.67 Aligned_cols=253 Identities=19% Similarity=0.285 Sum_probs=209.1
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCch----hhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGET----THQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.++|++.+.||+|+||.||+|+.+ +|+.||||++....... .....+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457999999999999999999765 68999999987543221 2357899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC----ceEEeccCc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY----EAHVSDFGT 838 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~ 838 (964)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 9999999999999999653 3588999999999999999999999 999999999999999888 799999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
+....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.. ....+....+...
T Consensus 166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~-----------~~~~~~~~~i~~~ 233 (321)
T 2a2a_A 166 AHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-----------DTKQETLANITSV 233 (321)
T ss_dssp CEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC-----------SSHHHHHHHHHTT
T ss_pred ceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC-----------CCHHHHHHHHHhc
Confidence 98765432 23455789999999999999999999999999999999999999752 2223344444333
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+ ..........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 234 SYDFD--EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCCC--HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccccC--hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 32221 1111233456788999999999999999999986
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=350.73 Aligned_cols=255 Identities=23% Similarity=0.397 Sum_probs=207.8
Q ss_pred hhcccccceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
.++|+..+.||+|+||.||+|+.. ++..||||++... ........+.+|+.+++++ +||||+++++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 468999999999999999999763 5678999998753 2344557789999999999 89999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 759 ARHSFLVYEYLERGSLARILSSETA--------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
.+..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+. +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 9999999999999999999976432 2488999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------ 263 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------ 263 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC------
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC------
Confidence 999999999999999876544321 223456789999999998889999999999999999999 99997532
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+....+........ ...+...+.+++.+||+.||++||+++++++.|+
T Consensus 264 -----~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 264 -----PVEELFKLLKEGHRMDK-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp -----CHHHHHHHHHHTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CHHHHHHHHhcCCCCCC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22233333322221111 1123456888999999999999999999999885
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=350.50 Aligned_cols=250 Identities=21% Similarity=0.337 Sum_probs=199.2
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC--CceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH--RNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|..++++.||||++............+.+|+.++++++| |||+++++++.++...++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 4699999999999999999998889999999997655555666789999999999976 99999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
|+ .+|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++ ++.+||+|||+++......
T Consensus 89 e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred eC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 94 578999999764 3588999999999999999999999 999999999999997 6889999999998765443
Q ss_pred C--Ccccccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 847 S--NWSELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 847 ~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .......
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----------~~~~~~~ 231 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----------NQISKLH 231 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC----------SHHHHHH
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh----------hHHHHHH
Confidence 2 2235579999999999865 678999999999999999999999985321 1112233
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
............. .....+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~----~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 232 AIIDPNHEIEFPD----IPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp HHHCTTSCCCCCC----CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhcCCcccCCcc----cCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 3333322221111 11245778889999999999999999975
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=364.51 Aligned_cols=254 Identities=21% Similarity=0.339 Sum_probs=206.7
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
++....++|+..+.||+|+||+||+|+.+ +++.||+|++.+... .......+.+|+.+++.++||||+++++++.+++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445678999999999999999999765 588999999864211 1122245788999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..|+||||++||+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 999999999999999999653 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CccccccccccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 841 LLKPDSS-NWSELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 841 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.. ....+....+
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-----------~~~~~~~~~i 285 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-----------DSLVGTYSKI 285 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHH
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC-----------CChhhHHHHH
Confidence 7654432 233567999999999998765 78999999999999999999999852 2223334444
Q ss_pred hcc----CCCCCccccchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 037111 916 FDA----RLPPPWLEVGVEDKLKSIIEVALSCVDANPER--RPNMQIVCK 959 (964)
Q Consensus 916 ~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPs~~evl~ 959 (964)
... ..+.. .....++.+++.+|+..+|++ ||+++||++
T Consensus 286 ~~~~~~~~~p~~------~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 286 MNHKNSLTFPDD------NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HTHHHHCCCCTT------CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred HhccccccCCCc------ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 332 22211 122345778888999999998 999999975
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=343.08 Aligned_cols=252 Identities=22% Similarity=0.409 Sum_probs=207.0
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|...+++.||||++.... .....+.+|+.++++++||||+++++++.+ +..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 35799999999999999999998888899999986432 234678999999999999999999999874 56899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||.+........
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 99999999999765444589999999999999999999999 999999999999999999999999999987654332
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
......+++.|+|||.+.+..++.++||||||+++|||++ |+.||... ...+....+........
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~-- 231 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----------TNPEVIQNLERGYRMVR-- 231 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC-----------CHHHHHHHHHTTCCCCC--
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc-----------CHHHHHHHHhcccCCCC--
Confidence 1223456788999999998889999999999999999999 89997532 22233333322211111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+..+.+++.+||+.||++|||++++++.|+
T Consensus 232 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 232 ---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cccccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 1223456888999999999999999999999885
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=355.21 Aligned_cols=257 Identities=24% Similarity=0.401 Sum_probs=205.7
Q ss_pred HhhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (964)
..++|+..+.||+|+||.||+|+. .++..||||++.... .......+.+|+.+++++ +||||+++++++...
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 346899999999999999999975 245679999997432 233346789999999999 899999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccC
Q 037111 760 RHSFLVYEYLERGSLARILSSETA---------------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDV 818 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dl 818 (964)
+..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 999999999999999999976432 2378999999999999999999999 9999999
Q ss_pred CCCCeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 037111 819 SSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLL 895 (964)
Q Consensus 819 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~ 895 (964)
||+||+++.++.+||+|||++......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999866544322 234457889999999999999999999999999999998 99998532
Q ss_pred ccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 896 SSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.. .............++. ....+..+.+++.+||+.||++|||+.++++.|+
T Consensus 279 ~~-----------~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 279 PV-----------DANFYKLIQNGFKMDQ----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp CC-----------SHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc-----------HHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 21 1222222222222111 1123456888999999999999999999999885
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-38 Score=339.74 Aligned_cols=249 Identities=27% Similarity=0.462 Sum_probs=203.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
+.++|++.+.||+|+||.||+|... +++.||||++.... ........+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 4578999999999999999999665 57789999986432 122234678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp EECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 999999999999997653 488999999999999999999999 999999999999999999999999999865433
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.. ....+....+.......+
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~- 227 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-----------NTYQETYKRISRVEFTFP- 227 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHHTCCCCC-
T ss_pred c--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC-----------CcHHHHHHHHHhCCCCCC-
Confidence 2 22345789999999999999999999999999999999999999752 222333333333332221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++|||++|+++
T Consensus 228 -----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 228 -----DFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp -----TTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred -----CcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 113345778899999999999999999986
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=352.11 Aligned_cols=252 Identities=20% Similarity=0.290 Sum_probs=205.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (964)
..++|+..+.||+|+||.||+|..+ +++.||||++..... ...+|++++.++ +||||+++++++.+++..|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 3567999999999999999999765 688999999875322 234677787776 79999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC----CceEEeccCccc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE----YEAHVSDFGTAK 840 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~ 840 (964)
||||++||+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||++..+ +.+||+|||+++
T Consensus 94 v~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999999999654 3489999999999999999999999 99999999999998543 359999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.............||+.|+|||++.+..++.++||||+||++|||++|+.||.... .....+....+.....
T Consensus 169 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~~~~i~~~~~ 240 (342)
T 2qr7_A 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP--------DDTPEEILARIGSGKF 240 (342)
T ss_dssp ECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST--------TSCHHHHHHHHHHCCC
T ss_pred cCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC--------cCCHHHHHHHHccCCc
Confidence 77665555556789999999999988889999999999999999999999986321 1233344555544444
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+. .........+.+++.+||+.||++||++.++++
T Consensus 241 ~~~~--~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 SLSG--GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CCCS--TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccCc--cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3221 111233456788899999999999999999874
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=368.31 Aligned_cols=255 Identities=23% Similarity=0.272 Sum_probs=209.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||||++.... ........+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999765 79999999986432 1223346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||++||+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 9999999999999876666699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....+....+.......+
T Consensus 340 ~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~-------~~~~~~i~~~i~~~~~~~p-- 409 (576)
T 2acx_A 340 Q-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK-------KIKREEVERLVKEVPEEYS-- 409 (576)
T ss_dssp C-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS-------CCCHHHHHHHHHHCCCCCC--
T ss_pred c-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc-------chhHHHHHHHhhcccccCC--
Confidence 3 23455899999999999998999999999999999999999999864221 1112222333322222111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.....++.+++.+||..||++|| +++||++
T Consensus 410 ----~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 410 ----ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ----ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 12335578888899999999999 6788764
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=347.14 Aligned_cols=264 Identities=23% Similarity=0.370 Sum_probs=206.2
Q ss_pred hcccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 761 (964)
+.|+..+.||+|+||.||+|++ .+++.||||++.... .......+.+|+.++++++||||+++++++.+. ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 4588999999999999999983 468899999987533 333457889999999999999999999999876 66
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccc
Confidence 899999999999999996543 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC---CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc---CCCCCCCCh-hHHHHh
Q 037111 842 LKPDSS---NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS---DSSLPGANM-NEAIDH 914 (964)
Q Consensus 842 ~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~---~~~~~~~~~-~~~~~~ 914 (964)
...... ......+|+.|+|||.+.+..++.++||||+|+++|||++|+.|+....... ......... ......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 765432 2234567888999999999999999999999999999999999864322110 001111111 122222
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+......+. ....+..+.+++.+||+.||++|||++++++.|+
T Consensus 256 ~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 256 LKEGKRLPC-----PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHTTCCCCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HhccCCCCC-----CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 222211111 1233456888999999999999999999999986
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=351.17 Aligned_cols=252 Identities=23% Similarity=0.380 Sum_probs=197.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCe----EEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||+||+|++. +++. ||+|.+... ......+.+.+|+.++++++||||+++++++.++. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 57999999999999999999754 4443 588877542 23344578999999999999999999999998754 78
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+|+||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 9999999999999997644 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
..... .....+|+.|+|||.+.+..++.++|||||||++|||+| |+.||..... .+....+.....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----------~~~~~~~~~~~~ 237 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----------SEISSILEKGER 237 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----------GGHHHHHHTTCC
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----------HHHHHHHHcCCC
Confidence 44332 223456889999999999999999999999999999999 9999863221 122222211111
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+. ...+...+.+++.+||+.||++||+++++++.|+
T Consensus 238 ~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 238 LPQ-----PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCC-----CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CCC-----CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111 1123456888999999999999999999998874
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=345.58 Aligned_cols=271 Identities=24% Similarity=0.359 Sum_probs=202.9
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhC--CCCCceeeEEeeeecC-
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTG--VRHRNIVKFYGFCSHA- 759 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~- 759 (964)
......++|++.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++.. ++||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 33445578999999999999999999886 899999998532 12344455555544 4899999999999877
Q ss_pred ---ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEeccCCCCCeEECCCCce
Q 037111 760 ---RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC-----RPPIVHRDVSSKNVLLDFEYEA 831 (964)
Q Consensus 760 ---~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~iiH~dlkp~Nill~~~~~~ 831 (964)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+.. +++|+||||||+||+++.++.+
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 6899999999999999999654 4889999999999999999999762 3489999999999999999999
Q ss_pred EEeccCcccccCCCCCC----ccccccccccccccccccCCCCcc------hhHHHHHHHHHHHHhCCCCCCccccccCC
Q 037111 832 HVSDFGTAKLLKPDSSN----WSELAGTYGYVAPELAYTMKVTEK------CDVYSFGVLALEVIKGQHPKDLLSSLSDS 901 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~------sDvwSlGvll~el~tg~~p~~~~~~~~~~ 901 (964)
||+|||+++........ .....||+.|+|||.+.+..++.+ +|||||||++|||+||..|+.........
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 99999999766543322 124579999999999987766655 99999999999999995554322221110
Q ss_pred ----CCCCCChhHHHHhhhccCCCCCc-cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 ----SLPGANMNEAIDHMFDARLPPPW-LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....................+.. .......++..+.+++.+||+.||++|||+++|++.|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 00111112222222222222211 11223477888999999999999999999999999985
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-38 Score=354.31 Aligned_cols=250 Identities=21% Similarity=0.341 Sum_probs=200.5
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC--CCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR--HRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 766 (964)
..|++.+.||+|+||.||+|..++++.||||++............+.+|+.++++++ ||||+++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 459999999999999999999888999999999765555556678999999999996 599999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
| +.+|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++......
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 56789999997654 588889999999999999999999 999999999999995 6899999999998765443
Q ss_pred C--Ccccccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 847 S--NWSELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 847 ~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+.
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~----------~~~~~~~ 278 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----------NQISKLH 278 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC----------CHHHHHH
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh----------HHHHHHH
Confidence 2 2235579999999999865 368899999999999999999999985321 1123333
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+.......+.... ....+.+++.+||..||++||+++|+++
T Consensus 279 ~~~~~~~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 279 AIIDPNHEIEFPDI----PEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp HHHCTTSCCCCCCC----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhCccccCCCCcc----chHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 44433322211111 1345778899999999999999999975
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=349.95 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=196.8
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc----ee
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----HS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~ 762 (964)
++|++.+.||+|+||.||+|+. .+++.||||++.... ........+.+|+.++++++||||+++++++.... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5799999999999999999975 578899999997543 23344567899999999999999999999987654 34
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred EEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 99999999999999997654 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC---CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 843 KPDSS---NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 843 ~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||... ...+.........
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----------~~~~~~~~~~~~~ 235 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-----------SPVSVAYQHVRED 235 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----------SHHHHHHHHHHCC
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC-----------ChHHHHHHHhcCC
Confidence 54322 223456899999999999999999999999999999999999998532 2223333332222
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..++ .......+.++.+++.+||+.||++||++.+++.
T Consensus 236 ~~~~--~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 236 PIPP--SARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCCH--HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCCc--ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 2221 1111234456888999999999999998766653
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=345.04 Aligned_cols=251 Identities=29% Similarity=0.507 Sum_probs=196.6
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|++.+.||+|+||.||+|+.. ++.||||++.. ....+.+.+|+.++++++||||+++++++.+ ..++|||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e 79 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME 79 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE
Confidence 357899999999999999999885 78899999863 2345788999999999999999999999874 4799999
Q ss_pred eccCCCHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc-eEEeccCcccccCCC
Q 037111 768 YLERGSLARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE-AHVSDFGTAKLLKPD 845 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~-~kl~Dfg~a~~~~~~ 845 (964)
|+++|+|.+++..... ..+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999999999976432 24788899999999999999999943339999999999999998886 799999999765432
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ..............++.
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~-- 225 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG---------PAFRIMWAVHNGTRPPL-- 225 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS---------SHHHHHHHHHTTCCCCC--
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc---------cHHHHHHHHhcCCCCCc--
Confidence 2234689999999999999999999999999999999999999863221 11122222222222211
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+..+.+++.+||+.||++|||++++++.|+
T Consensus 226 ---~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 226 ---IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp ---BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1223456788999999999999999999999875
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=369.83 Aligned_cols=348 Identities=18% Similarity=0.180 Sum_probs=214.3
Q ss_pred ceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCc
Q 037111 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGN 309 (964)
Q Consensus 230 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 309 (964)
+.++.+++.++ .+|..+ .++++.|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 56777888877 556544 357888888888888777778888888888888888888777888888888888888888
Q ss_pred cCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCc
Q 037111 310 QFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSS 389 (964)
Q Consensus 310 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~ 389 (964)
++++..+..|..+++|++|++++|.+.+..+..|.++++|+.|++++|.+++..+..|..+++|+.|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 88877666667777777777777777766666777777777777777777666666666666666666666666655555
Q ss_pred cccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCC
Q 037111 390 NWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDL 469 (964)
Q Consensus 390 ~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 469 (964)
.+..+++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+.+|.......+|+.|+|++|.++...+..+..+++
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~- 249 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY- 249 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT-
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc-
Confidence 5555555555555555555555555555555555555555554444444444445555555555555333334444444
Q ss_pred CceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCC
Q 037111 470 GYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHN 549 (964)
Q Consensus 470 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 549 (964)
|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|
T Consensus 250 -----------------------L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 250 -----------------------LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp -----------------------CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred -----------------------cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 445555555544444444555555555555555555555555555555555555555
Q ss_pred cCCCcccccccccccceEEEecCCcccccCCCCccCCCCCcccccCCCCccCCCC
Q 037111 550 NLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVS 604 (964)
Q Consensus 550 ~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 604 (964)
+|++..+..|..+++|+.|++++|+|.|..+..-.++......+.++...|+.+.
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 5555555555555555566666666555433211111122233455566665543
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=336.23 Aligned_cols=250 Identities=22% Similarity=0.304 Sum_probs=206.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|..+ ++..||+|++..... .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 467999999999999999999765 577899999875332 33567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~~~ 843 (964)
||+++++|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||.+....
T Consensus 86 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 86 ELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred eccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 9999999999997643 488999999999999999999999 99999999999999 788999999999998765
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
... ......||+.|+|||.+.+. ++.++||||+|+++|||++|+.||... ...+....+.......+
T Consensus 161 ~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~ 227 (277)
T 3f3z_A 161 PGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP-----------TDSEVMLKIREGTFTFP 227 (277)
T ss_dssp TTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHCCCCCC
T ss_pred Ccc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCC-----------CHHHHHHHHHhCCCCCC
Confidence 443 23455799999999998654 899999999999999999999997532 22344444444443332
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .........+.+++.+||+.||++|||+.++++
T Consensus 228 ~--~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 228 E--KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp H--HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred c--hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 111234466888999999999999999999874
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=350.82 Aligned_cols=259 Identities=22% Similarity=0.280 Sum_probs=204.2
Q ss_pred HHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc---CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT---GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
....++|+..+.||+|+||.||+|.. .+++.||+|++.... ......+.+.+|+.++++++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 34567899999999999999999976 468899999986431 23345578999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcC--------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 037111 761 HSFLVYEYLERGSLARILSSET--------------------------------------ATEMDWSKRVNVIKGVAHAL 802 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~i~~~l 802 (964)
..++||||+++|+|.+++.... ...+++..+..++.||++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 9999999999999999985210 11235677889999999999
Q ss_pred HHHhhCCCCCeEeccCCCCCeEECCCC--ceEEeccCcccccCCCCC----Ccccccccccccccccccc--CCCCcchh
Q 037111 803 SYMHHECRPPIVHRDVSSKNVLLDFEY--EAHVSDFGTAKLLKPDSS----NWSELAGTYGYVAPELAYT--MKVTEKCD 874 (964)
Q Consensus 803 ~~LH~~~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~sD 874 (964)
+|||+. +|+||||||+||+++.++ .+||+|||+++....... ......||+.|+|||.+.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998776 899999999986543221 2345679999999999875 67899999
Q ss_pred HHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 875 VYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 875 vwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
|||||+++|||++|+.||.. ....+....+.......+. .........+.+++.+||+.||++||++
T Consensus 259 iwslG~il~el~~g~~pf~~-----------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~ 325 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPG-----------VNDADTISQVLNKKLCFEN--PNYNVLSPLARDLLSNLLNRNVDERFDA 325 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCTTS--GGGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred HHHHHHHHHHHHHCCCCCCC-----------CChHHHHHHHHhcccccCC--cccccCCHHHHHHHHHHcCCChhHCCCH
Confidence 99999999999999999752 2233444444444433221 1122344568889999999999999999
Q ss_pred HHHHH
Q 037111 955 QIVCK 959 (964)
Q Consensus 955 ~evl~ 959 (964)
.++++
T Consensus 326 ~~~l~ 330 (345)
T 3hko_A 326 MRALQ 330 (345)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99986
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=349.07 Aligned_cols=266 Identities=21% Similarity=0.308 Sum_probs=212.0
Q ss_pred CcccHHHHHHHhhccccc-ceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEE
Q 037111 677 GKLVYEEIIRSINNFDES-FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFY 753 (964)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~ 753 (964)
+...+.......+.|.+. +.||+|+||.||+|..+ +++.||+|++............+.+|+.+++.+. ||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 344444555566678887 88999999999999765 6899999999765555555678999999999884 79999999
Q ss_pred eeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCc
Q 037111 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYE 830 (964)
Q Consensus 754 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~ 830 (964)
+++.+.+..++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 9999999999999999999999999766566799999999999999999999999 9999999999999998 789
Q ss_pred eEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhH
Q 037111 831 AHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 831 ~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+||+|||+++...... ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||... ...+
T Consensus 173 ~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-----------~~~~ 240 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE-----------DNQE 240 (327)
T ss_dssp EEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHH
T ss_pred EEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----------CchH
Confidence 9999999998765432 233457999999999999999999999999999999999999997532 2223
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+.......+ ..........+.+++.+||+.||++|||++++++
T Consensus 241 ~~~~i~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 241 TYLNISQVNVDYS--EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHHHHTCCCCC--TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHhcccccC--chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 3333322222211 1112234456788899999999999999999875
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=344.35 Aligned_cols=257 Identities=23% Similarity=0.347 Sum_probs=200.1
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC---chhhHHHHHHHHHHHhCC---CCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG---ETTHQKEFLSEIKALTGV---RHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~ 759 (964)
..++|++.+.||+|+||+||+|+. .+++.||||++..... .......+.+|+.+++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999976 4789999999864321 111224566777776665 599999999999775
Q ss_pred c-----eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 760 R-----HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 760 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
. ..++||||+. |+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5899999997 5999999877666699999999999999999999999 99999999999999999999999
Q ss_pred ccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 835 DFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 835 Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
|||+++...... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||..... .+....
T Consensus 163 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----------~~~~~~ 230 (308)
T 3g33_A 163 DFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-----------ADQLGK 230 (308)
T ss_dssp SCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-----------HHHHHH
T ss_pred eCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHH
Confidence 999998665332 23456789999999999999999999999999999999999999853221 111211
Q ss_pred hhc---cCCC------------------CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 915 MFD---ARLP------------------PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 915 ~~~---~~~~------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+.. .... +........+....+.+++.+||+.||++|||+.|+++
T Consensus 231 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 231 IFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 111 0000 00001111233456788999999999999999999975
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=340.07 Aligned_cols=250 Identities=20% Similarity=0.350 Sum_probs=209.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +++.||+|++.... ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357999999999999999999765 57889999986542 2344557788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++.... .+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||.+......
T Consensus 94 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999986543 488999999999999999999999 9999999999999999999999999999877655
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ..+....+.......+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~-- 235 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----------LKETYLRIKKNEYSIP-- 235 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----------HHHHHHHHHTTCCCCC--
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHhhccCCCc--
Confidence 444455678999999999999889999999999999999999999985322 2233333333332211
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++|||++++++
T Consensus 236 ----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 236 ----KHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ----cccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 122345778889999999999999999875
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=350.15 Aligned_cols=258 Identities=20% Similarity=0.303 Sum_probs=193.4
Q ss_pred HHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
....++|++.+.||+|+||+||+|+. .+++.||||++............+.+|+.++++++||||+++++++.+++..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 34567899999999999999999965 47889999999755444444567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC-----CCCceEEeccCc
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-----FEYEAHVSDFGT 838 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-----~~~~~kl~Dfg~ 838 (964)
+||||+++ +|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||+
T Consensus 110 lv~e~~~~-~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEEECCSE-EHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEEecCCC-CHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 99999985 9999997654 488999999999999999999999 999999999999994 455699999999
Q ss_pred ccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
++.............||+.|+|||.+.+. .++.++||||+||++|||++|+.||..... .+....+..
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----------~~~~~~~~~ 252 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-----------IDQLFKIFE 252 (329)
T ss_dssp HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHH
T ss_pred ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH-----------HHHHHHHHH
Confidence 98776554445566789999999999875 489999999999999999999999853221 111111110
Q ss_pred c---C-----------------CCC----CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 A---R-----------------LPP----PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~---~-----------------~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. . .+. ............++.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 253 VLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 0 000 0000000113356788999999999999999999986
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=345.30 Aligned_cols=257 Identities=23% Similarity=0.373 Sum_probs=198.6
Q ss_pred HhhcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc--
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-- 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 760 (964)
..++|+..+.||+|+||.||+|+.. +++.||||++..........+.+.+|+.++++++||||+++++++.+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3467999999999999999999654 3447999998765555555678999999999999999999999997754
Q ss_pred ---eeEEEEEeccCCCHHHHhhh----cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 761 ---HSFLVYEYLERGSLARILSS----ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 761 ---~~~lv~e~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
..++||||+++|+|.+++.. .....+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEE
Confidence 35999999999999999853 2335689999999999999999999999 9999999999999999999999
Q ss_pred eccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhH
Q 037111 834 SDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----------~~~ 257 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ-----------NHE 257 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------GGG
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC-----------HHH
Confidence 99999987654322 1223457889999999999999999999999999999999 888875322 223
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+.....+.. ....+..+.+++.+||+.||++||+++++++.|+
T Consensus 258 ~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 258 MYDYLLHGHRLKQ-----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp HHHHHHTTCCCCC-----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCC-----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 3333333322211 1233456888999999999999999999999885
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-38 Score=346.43 Aligned_cols=253 Identities=28% Similarity=0.462 Sum_probs=200.2
Q ss_pred hcccccceeecCCceeEEEEEeCC-----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS-----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.+|+..+.||+|+||.||+|..+. +..||||+++... .......+.+|+.++++++||||+++++++.+.+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 457778999999999999997642 2359999987532 3444567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 123 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 9999999999999997543 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||... ...+....+....
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-----------~~~~~~~~~~~~~ 267 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-----------SNHEVMKAINDGF 267 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----------CHHHHHHHHHTTC
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC-----------CHHHHHHHHHCCC
Confidence 43221 122346788999999998899999999999999999999 99997532 2233334433332
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+. ....+..+.+++.+||+.||++||+++++++.|+
T Consensus 268 ~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 268 RLPT-----PMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp CCCC-----CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred cCCC-----cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2211 1233456888999999999999999999999885
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=359.33 Aligned_cols=263 Identities=17% Similarity=0.265 Sum_probs=198.4
Q ss_pred hhcccccceeecCCceeEEEEEeCC------CCeEEEEEeccccCchhh---------HHHHHHHHHHHhCCCCCceeeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS------GDTVAVKKLHSFTGETTH---------QKEFLSEIKALTGVRHRNIVKF 752 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l 752 (964)
.++|++.+.||+|+||.||+|.++. ++.||||++......... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3579999999999999999997754 478999998653211111 1234456677888899999999
Q ss_pred EeeeecC----ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC--
Q 037111 753 YGFCSHA----RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-- 826 (964)
Q Consensus 753 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-- 826 (964)
++++... ...++||||+ +|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 9998764 4589999999 99999999764 34599999999999999999999999 999999999999999
Q ss_pred CCCceEEeccCcccccCCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 037111 827 FEYEAHVSDFGTAKLLKPDSSN-------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899 (964)
Q Consensus 827 ~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~ 899 (964)
.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999766433211 123459999999999999999999999999999999999999986322110
Q ss_pred CCCC-CCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 900 DSSL-PGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 900 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.... ........+....+..++. ...+.++.+++..||+.||++||++++|++.|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 269 KYVRDSKIRYRENIASLMDKCFPA-------ANAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHSCT-------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHhccc-------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 0000 0000000011111111110 122456888999999999999999999999885
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=348.12 Aligned_cols=258 Identities=20% Similarity=0.360 Sum_probs=210.9
Q ss_pred HHhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA 759 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 759 (964)
...++|+..+.||+|+||.||+|... +++.||||++.... .......+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 34578999999999999999999654 36789999987532 334456789999999999999999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCce
Q 037111 760 RHSFLVYEYLERGSLARILSSET--------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA 831 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~ 831 (964)
+..++||||+++|+|.+++.... ...+++..+.+++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeE
Confidence 99999999999999999997532 24578999999999999999999999 99999999999999999999
Q ss_pred EEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCCh
Q 037111 832 HVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~ 908 (964)
||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||.. ...
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~-----------~~~ 246 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-----------LSN 246 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT-----------SCH
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc-----------CCH
Confidence 99999999765433221 223356889999999999999999999999999999999 8888753 222
Q ss_pred hHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.+....+........ ....+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 247 ~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 247 EQVLRFVMEGGLLDK-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296 (322)
T ss_dssp HHHHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred HHHHHHHHcCCcCCC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 334444433333221 12334568889999999999999999999999864
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=349.22 Aligned_cols=267 Identities=24% Similarity=0.406 Sum_probs=201.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.. +|+.||||++..........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 568999999999999999999765 5899999998765555555677889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++++|.++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 999999999887543 3489999999999999999999999 99999999999999999999999999998766555
Q ss_pred CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCC-----CCC--ChhHHHHh--hh
Q 037111 847 SNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL-----PGA--NMNEAIDH--MF 916 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~-----~~~--~~~~~~~~--~~ 916 (964)
.......|++.|+|||.+.+. .++.++||||+||++|+|++|+.||........... ... ........ ..
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 445566799999999998875 689999999999999999999999864322100000 000 00000000 00
Q ss_pred c-cCCCC----CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 D-ARLPP----PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~-~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ...+. .............+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 00110 0001111234567889999999999999999998874
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=354.99 Aligned_cols=252 Identities=20% Similarity=0.272 Sum_probs=192.4
Q ss_pred hhccccc-ceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHH-hCCCCCceeeEEeeeec----Cc
Q 037111 688 INNFDES-FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKAL-TGVRHRNIVKFYGFCSH----AR 760 (964)
Q Consensus 688 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~ 760 (964)
.++|... +.||+|+||+||+|..+ +++.||||++... ..+.+|+.++ +..+||||+++++++.. ..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 3567766 68999999999999765 6889999998631 3466788876 45589999999999875 56
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccC
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFG 837 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg 837 (964)
..|+||||++||+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 789999999999999999876666799999999999999999999999 9999999999999998 7899999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+..
T Consensus 210 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------~~~~~~~i~~ 281 (400)
T 1nxk_A 210 FAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------SPGMKTRIRM 281 (400)
T ss_dssp TCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS-------CCSHHHHHHH
T ss_pred cccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc-------cHHHHHHHHc
Confidence 998655332 23456789999999999999999999999999999999999999864332111 0011122222
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+. ........++.+++.+||+.||++|||++|+++
T Consensus 282 ~~~~~~~--~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 282 GQYEFPN--PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp TCCCCCT--TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CcccCCC--cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2221110 011234456788999999999999999999986
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-38 Score=340.60 Aligned_cols=253 Identities=26% Similarity=0.373 Sum_probs=203.1
Q ss_pred hhcccccc-eeecCCceeEEEEEe---CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESF-CIGRGGYGSVYKAEL---PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|++.+ .||+|+||.||+|.+ .+++.||||++..........+.+.+|+.+++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35788887 999999999999954 2467899999976544455567899999999999999999999999 567789
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 94 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 999999999999999764 3488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSNW---SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
...... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+....+....
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----------~~~~~~~~~~~~ 237 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----------GSEVTAMLEKGE 237 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----------HHHHHHHHHTTC
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-----------HHHHHHHHHcCC
Confidence 443321 22346788999999998889999999999999999999 999975322 222233322222
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.. ....+..+.+++.+||+.||++||++.++++.|+
T Consensus 238 ~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 238 RMGC-----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCCC-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 1233456888999999999999999999999886
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=336.17 Aligned_cols=252 Identities=19% Similarity=0.312 Sum_probs=204.6
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc----hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE----TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||.||+|+.+ +++.||+|.++..... ....+.+.+|+.++++++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 57999999999999999999775 6899999998754322 223578999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC----ceEEeccCcc
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY----EAHVSDFGTA 839 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~a 839 (964)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++ .+||+|||.+
T Consensus 85 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999996543 489999999999999999999999 999999999999999877 8999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||... ...+....+....
T Consensus 160 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----------~~~~~~~~~~~~~ 227 (283)
T 3bhy_A 160 HKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE-----------TKQETLTNISAVN 227 (283)
T ss_dssp EECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-----------SHHHHHHHHHTTC
T ss_pred eeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc-----------chHHHHHHhHhcc
Confidence 8765432 233456899999999999999999999999999999999999997532 2223333333322
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+ .......+..+.+++.+||+.||++||++.++++
T Consensus 228 ~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 228 YDFD--EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCCC--HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCc--chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 2211 1111233456788999999999999999999986
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-38 Score=348.28 Aligned_cols=247 Identities=26% Similarity=0.434 Sum_probs=201.6
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
..|+..+.||+|+||.||+|+. .+++.||||++.... ........+.+|+.++++++||||+++++++.+++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588999999999999999975 578899999986532 23344567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+. |++.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred ecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 9997 58888886443 4589999999999999999999999 9999999999999999999999999999866433
Q ss_pred CCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 847 SNWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
....||+.|+|||++. +..++.++|||||||++|||++|+.||.... .......+.....+..
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-----------~~~~~~~~~~~~~~~~ 273 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----------AMSALYHIAQNESPAL 273 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHHHHHHSCCCCC
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----------hHHHHHHHHhcCCCCC
Confidence 2457899999999984 5678999999999999999999999975321 2222333333222211
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .......+.+++.+||+.||++|||++++++
T Consensus 274 ~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 274 Q----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C----CCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1 1123345778888999999999999999875
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-38 Score=343.10 Aligned_cols=258 Identities=20% Similarity=0.292 Sum_probs=199.3
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
...++|++.+.||+|+||.||+|+.. +++.||+|++..... .......+.+|+.++++++||||+++++++..++..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34678999999999999999999765 688999999875432 3334577899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 9999999999999997653 488999999999999999999999 99999999999999999999999999997665
Q ss_pred CCC-CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 844 PDS-SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 844 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ..+........+.
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------~~~~~~~~~~~~~ 253 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL------------SVMGAHINQAIPR 253 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH------------HHHHHHHHSCCCC
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH------------HHHHHHhccCCCC
Confidence 432 223355789999999999999999999999999999999999999853211 1222222222221
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRP-NMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-s~~evl~~L~ 962 (964)
+ .......+..+.+++.+||+.||++|| +++++++.|+
T Consensus 254 ~--~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 254 P--STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp G--GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred c--cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 1 111223445688899999999999999 9999999885
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=357.05 Aligned_cols=260 Identities=23% Similarity=0.295 Sum_probs=207.0
Q ss_pred HHHHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeec
Q 037111 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH 758 (964)
Q Consensus 681 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 758 (964)
.++.....++|+..+.||+|+||.||+|+.+ +|+.||||++.+... .......+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444455789999999999999999999775 789999999864221 12223457889999999999999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
.+..|+||||++||+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++++||+|||+
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 999999999999999999997643 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC-ccccccccccccccccc-------cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhH
Q 037111 839 AKLLKPDSSN-WSELAGTYGYVAPELAY-------TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 839 a~~~~~~~~~-~~~~~g~~~y~aPE~~~-------~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
++........ .....||+.|+|||++. +..++.++|||||||++|||++|+.||... ...+
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-----------~~~~ 277 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD-----------STAE 277 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS-----------SHHH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC-----------CHHH
Confidence 9876554332 23457999999999987 356899999999999999999999998532 2233
Q ss_pred HHHhhhcc--CCCCCccccchHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 037111 911 AIDHMFDA--RLPPPWLEVGVEDKLKSIIEVALSCVDANPERR---PNMQIVCK 959 (964)
Q Consensus 911 ~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---Ps~~evl~ 959 (964)
....+... ....+.. ....+.++.+++.+||. +|++| |+++|+++
T Consensus 278 ~~~~i~~~~~~~~~p~~---~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 278 TYGKIVHYKEHLSLPLV---DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHTHHHHCCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHhcccCcCCCcc---ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 33333321 1111110 11234567788889999 99998 58888864
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=354.78 Aligned_cols=252 Identities=26% Similarity=0.405 Sum_probs=191.8
Q ss_pred cccccceeecCCceeEEEEEeC--CC--CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-CceeEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP--SG--DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-ARHSFL 764 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~l 764 (964)
.|+..+.||+|+||.||+|+.. ++ ..||||.+... ......+.+.+|+.++++++||||+++++++.. ++..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 5777889999999999999764 22 35899988643 334456789999999999999999999998754 568899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 169 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccc
Confidence 999999999999996543 4478899999999999999999999 999999999999999999999999999986643
Q ss_pred CCCC----ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 845 DSSN----WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 845 ~~~~----~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
.... .....+++.|+|||.+.+..++.++||||||+++|||+| |..||..... .+....+....
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~-----------~~~~~~~~~~~ 313 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGR 313 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS-----------SCHHHHHHTTC
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH-----------HHHHHHHHcCC
Confidence 3211 123457789999999999999999999999999999999 5666643221 11222222222
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.... ...++..+.+++.+||+.||++||+++++++.|+
T Consensus 314 ~~~~-----p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 314 RLLQ-----PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 1123456888999999999999999999999885
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=374.27 Aligned_cols=252 Identities=27% Similarity=0.462 Sum_probs=208.8
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|++.+.||+|+||.||+|+++.+..||||+++... ...+.|.+|+.++++++||||+++++++.+ +..++|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 45788999999999999999999878889999997532 234679999999999999999999999976 67899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 99999999999765445689999999999999999999999 999999999999999999999999999986653211
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-CCCCCc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 924 (964)
......++..|+|||.+.+..++.++|||||||++|||++ |+.||.. ....+....+... +.+.+
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~-----------~~~~~~~~~i~~~~~~~~~- 486 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVNREVLDQVERGYRMPCP- 486 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT-----------CCHHHHHHHHHTTCCCCCC-
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHcCCCCCCC-
Confidence 1123346788999999999999999999999999999999 8999752 2223334333322 12211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..++..+.+++.+||+.||++|||+++|++.|+.
T Consensus 487 -----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 487 -----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520 (535)
T ss_dssp -----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 2344568889999999999999999999999863
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=349.82 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=198.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCe----EEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||+||+|++. +++. ||+|.+.... .......+.+|+.++++++||||+++++++. +...+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 47899999999999999999754 4554 7788775432 2222346778999999999999999999986 46689
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 91 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 999999999999999754 23588899999999999999999999 99999999999999999999999999998775
Q ss_pred CCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC-
Q 037111 844 PDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR- 919 (964)
Q Consensus 844 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 919 (964)
.... ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||..... .+....+....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----------~~~~~~~~~~~~ 235 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----------AEVPDLLEKGER 235 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----------THHHHHHHTTCB
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----------HHHHHHHHcCCC
Confidence 4432 2344567889999999999999999999999999999999 9999863221 12222222211
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+ ..+...+.+++.+||..||++||+++++++.|+
T Consensus 236 ~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 236 LAQP------QICTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CCCC------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCCC------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 112334778899999999999999999999875
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-38 Score=345.98 Aligned_cols=250 Identities=20% Similarity=0.348 Sum_probs=209.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|...+.||+|+||.||+++.. +++.||+|++.... ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357999999999999999999765 57889999986542 2344567789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 120 ~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999986543 488999999999999999999999 9999999999999999999999999999877655
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........|++.|+|||.+.+..++.++||||||+++|||++|+.||... ...+....+.......+
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----------~~~~~~~~~~~~~~~~~-- 261 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----------CLKETYLRIKKNEYSIP-- 261 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-----------SHHHHHHHHHHTCCCCC--
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC-----------CHHHHHHHHhcCCCCCC--
Confidence 44455667999999999999989999999999999999999999998532 12233333333322211
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++||+++|+++
T Consensus 262 ----~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 262 ----KHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ----ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112345778889999999999999999875
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=357.22 Aligned_cols=265 Identities=22% Similarity=0.330 Sum_probs=201.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----cee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 762 (964)
++|++.+.||+|+||.||+|+.+ +++.||||++..........+.+.+|+.++++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 57999999999999999999764 678899999976555556667899999999999999999999999776 578
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+||||+. |+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+..
T Consensus 106 ~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 99999997 5999999653 4589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC----------------------Ccccccccccccccccc-ccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 037111 843 KPDSS----------------------NWSELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899 (964)
Q Consensus 843 ~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~ 899 (964)
..... ......||+.|+|||++ ....++.++||||+||++|||++|..||.......
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~ 259 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccc
Confidence 54321 12456789999999986 56669999999999999999999877765432222
Q ss_pred CCCCCCCC-----------------hhHHHHhhh------------------------ccC-CCCCccccchHHHHHHHH
Q 037111 900 DSSLPGAN-----------------MNEAIDHMF------------------------DAR-LPPPWLEVGVEDKLKSII 937 (964)
Q Consensus 900 ~~~~~~~~-----------------~~~~~~~~~------------------------~~~-~~~~~~~~~~~~~~~~l~ 937 (964)
...+++.. ....+..++ ... ..+.............+.
T Consensus 260 ~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 339 (432)
T 3n9x_A 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGI 339 (432)
T ss_dssp CCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHH
T ss_pred cccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHH
Confidence 22222211 000011000 000 000000111122345678
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 037111 938 EVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 938 ~li~~cl~~dp~~RPs~~evl~ 959 (964)
+++.+||..||++|||++|+++
T Consensus 340 dLl~~mL~~dP~~R~ta~e~L~ 361 (432)
T 3n9x_A 340 NLLESMLKFNPNKRITIDQALD 361 (432)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHhcCCcccCCCHHHHhc
Confidence 8999999999999999999985
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=347.82 Aligned_cols=244 Identities=22% Similarity=0.357 Sum_probs=202.6
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCch------hhHHHHHHHHHHHhCCCCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGET------THQKEFLSEIKALTGVRHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 759 (964)
..++|+..+.||+|+||.||+|+. .+++.||||++....... .....+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456899999999999999999975 478899999987543211 1334577899999999999999999999999
Q ss_pred ceeEEEEEeccCC-CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 760 RHSFLVYEYLERG-SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 760 ~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 9999999999777 9999996543 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
+........ .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ..
T Consensus 177 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------------~~ 238 (335)
T 3dls_A 177 AAYLERGKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------------VE 238 (335)
T ss_dssp CEECCTTCC-BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------TT
T ss_pred ceECCCCCc-eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------Hh
Confidence 987654432 345679999999999988877 78999999999999999999998642221 11
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....++. ....++.+++.+||++||++|||++++++
T Consensus 239 ~~~~~~~------~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 239 AAIHPPY------LVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp TCCCCSS------CCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hccCCCc------ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111 12345788899999999999999999986
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-38 Score=366.27 Aligned_cols=311 Identities=20% Similarity=0.145 Sum_probs=278.3
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
.+|.+..++++.|||++|++++..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|++++.++. +..++
T Consensus 25 ~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 104 (477)
T 2id5_A 25 AVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLS 104 (477)
T ss_dssp SCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCT
T ss_pred cCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCC
Confidence 45666778999999999999998889999999999999999999988899999999999999999999988775 78999
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecc
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 235 (964)
+|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 105 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 184 (477)
T 2id5_A 105 NLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR 184 (477)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEE
T ss_pred CCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCC
Confidence 99999999999998889999999999999999999998888899999999999999999998887889999999999999
Q ss_pred ccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccC
Q 037111 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFL 315 (964)
Q Consensus 236 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 315 (964)
+|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|+.|+|++|++++..+..+..+++|+.|+|++|++++..
T Consensus 185 ~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 264 (477)
T 2id5_A 185 HLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 264 (477)
T ss_dssp SCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEEC
T ss_pred CCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccC
Confidence 99999887788899999999999999888778877777779999999999998554467888999999999999999888
Q ss_pred CcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeecccc
Q 037111 316 PQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGEL 387 (964)
Q Consensus 316 p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~ 387 (964)
+..+..+.+|+.|++++|.+.+..|..|.++++|+.|+|++|+++++.+..|..+++|+.|+|++|++.+..
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 265 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp TTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred hhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 888888888888888888888888888888888888888888888888888888888888888888887654
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-38 Score=340.66 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=199.2
Q ss_pred hcccccceeecCCceeEEEEEeCCC----CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeee-ecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSG----DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC-SHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 763 (964)
.+|+..+.||+|+||.||+|+..+. ..||+|.+... ......+.+.+|+.++++++||||+++++++ ..++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 4688899999999999999976422 25899988753 3344557899999999999999999999986 4556889
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 104 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccc
Confidence 999999999999999653 34588999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCC----CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCC-CCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 844 PDSS----NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ-HPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 844 ~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
.... ......+|+.|+|||.+.+..++.++||||+|+++|||++|+ .||.... ..+....+...
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----------~~~~~~~~~~~ 248 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----------TFDITVYLLQG 248 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-----------TTTHHHHHHTT
T ss_pred ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-----------HHHHHHHHhcC
Confidence 4321 123345778999999999999999999999999999999955 4543211 11222222222
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..... ....+..+.+++.+||+.||++|||++++++.|+
T Consensus 249 ~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 249 RRLLQ-----PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC-----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 22111 0123346888999999999999999999999885
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=355.65 Aligned_cols=257 Identities=26% Similarity=0.429 Sum_probs=206.8
Q ss_pred HhhcccccceeecCCceeEEEEEeCC-C-----CeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELPS-G-----DTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (964)
..++|+..+.||+|+||.||+|.... + ..||+|.+.... .......+.+|+.+++++ +||||+++++++.+.
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 35689999999999999999997642 2 479999987533 334457799999999999 899999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC
Q 037111 760 RHSFLVYEYLERGSLARILSSET------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~ 827 (964)
+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECC
Confidence 99999999999999999997532 34578999999999999999999999 9999999999999999
Q ss_pred CCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCC
Q 037111 828 EYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 828 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~ 904 (964)
++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||+| |..||.....
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------- 272 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV------- 272 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS-------
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch-------
Confidence 999999999999866443322 223456789999999999999999999999999999998 8889753221
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
................ ....+..+.+++.+||+.||++|||+.+|++.|+
T Consensus 273 ----~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 273 ----NSKFYKLVKDGYQMAQ----PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp ----SHHHHHHHHHTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----hHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 1222222222221110 0112356788999999999999999999999885
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=346.60 Aligned_cols=198 Identities=24% Similarity=0.298 Sum_probs=175.8
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-----CCceeeEEeeeecCc
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-----HRNIVKFYGFCSHAR 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~ 760 (964)
..++|++.+.||+|+||+||+|+. .+++.||||++.. .......+..|+.+++.+. ||||+++++++...+
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 356899999999999999999976 4788999999863 2334456778999988886 999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-------------
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF------------- 827 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~------------- 827 (964)
..++||||+ +++|.+++.......+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 110 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 110 HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhcc
Confidence 999999999 88999999887766799999999999999999999999 9999999999999975
Q ss_pred ------------CCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 828 ------------EYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 828 ------------~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 789999999999865433 2345789999999999999999999999999999999999999864
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-38 Score=355.42 Aligned_cols=262 Identities=21% Similarity=0.307 Sum_probs=209.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc--eeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR--HSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 765 (964)
++|++.+.||+|+||+||+|+.+ +|+.||||++.... .......+.+|++++++++||||+++++++.... ..++|
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 57999999999999999999765 58999999987532 2333567889999999999999999999998755 78999
Q ss_pred EEeccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE----CCCCceEEeccCccc
Q 037111 766 YEYLERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL----DFEYEAHVSDFGTAK 840 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~a~ 840 (964)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999997643 23489999999999999999999999 99999999999999 778889999999998
Q ss_pred ccCCCCCCcccccccccccccccccc--------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYT--------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
...... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ...+.+
T Consensus 165 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-------~~~~~~ 236 (396)
T 4eut_A 165 ELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-------RNKEVM 236 (396)
T ss_dssp ECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT-------TCHHHH
T ss_pred EccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc-------chHHHH
Confidence 765432 2334579999999999865 567889999999999999999999986432211 112333
Q ss_pred HhhhccCCCC-------------------CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 913 DHMFDARLPP-------------------PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 913 ~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+..+..+. +............+.+++.+||..||++||+++++++.++
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 237 YKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp HHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred HHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 3333222110 0111223567778889999999999999999999988764
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=362.37 Aligned_cols=252 Identities=22% Similarity=0.365 Sum_probs=207.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|+.+ +++.||||++............+.+|+.++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999765 7899999998654433445678899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC---CCCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD---FEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~a~~~~ 843 (964)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 9999999999986653 489999999999999999999999 999999999999995 45679999999998765
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.. ....+....+.......+
T Consensus 176 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 176 QNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG-----------KNEYDILKRVETGKYAFD 242 (486)
T ss_dssp CC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCSC
T ss_pred CCC-ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCC
Confidence 432 2345679999999999876 599999999999999999999999752 223344455544443322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ......+..+.+++.+||.+||++|||+.++++
T Consensus 243 ~--~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 243 L--PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp S--GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred C--cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1 122334556788999999999999999999986
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=339.47 Aligned_cols=253 Identities=24% Similarity=0.379 Sum_probs=201.2
Q ss_pred cccccceeecCCceeEEEEEeC-CCC---eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee-EE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS-FL 764 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~l 764 (964)
.|+..+.||+|+||+||+|++. +++ .||+|++... ......+.+.+|+.++++++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 4667789999999999999753 222 6999998753 3344567889999999999999999999999876654 99
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+.+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 101 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp EECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 99999999999999653 34588999999999999999999999 999999999999999999999999999976543
Q ss_pred CC----CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 DS----SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~~----~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.. .......+++.|+|||.+.+..++.++||||||+++|+|++|+.|+.. .....+....+.....
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~----------~~~~~~~~~~~~~~~~ 246 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR----------HIDPFDLTHFLAQGRR 246 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTT----------TSCGGGHHHHHHTTCC
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCc----------cCCHHHHHHHhhcCCC
Confidence 22 222345678899999999999999999999999999999997666431 1112222222222221
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+. ....+..+.+++.+||+.||++|||++++++.|+
T Consensus 247 ~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 247 LPQ-----PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-----CccchHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111 1123356888999999999999999999999885
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=341.31 Aligned_cols=247 Identities=23% Similarity=0.408 Sum_probs=199.6
Q ss_pred hcccccceeecCCceeEEEEEeCC-C-------CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS-G-------DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
++|+..+.||+|+||+||+|+... + ..||+|++... .....+.+.+|+.++++++||||+++++++.+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 579999999999999999996542 3 46999998643 3344578999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc--------eE
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE--------AH 832 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~--------~k 832 (964)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +|
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred CCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 9999999999999999997643 3388999999999999999999999 9999999999999998887 99
Q ss_pred EeccCcccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHH
Q 037111 833 VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 911 (964)
|+|||.+...... ....+++.|+|||.+.+ ..++.++||||||+++|||++|..|+.. .......
T Consensus 162 l~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~----------~~~~~~~ 227 (289)
T 4fvq_A 162 LSDPGISITVLPK----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS----------ALDSQRK 227 (289)
T ss_dssp ECCCCSCTTTSCH----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTT----------TSCHHHH
T ss_pred eccCcccccccCc----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcc----------ccchHHH
Confidence 9999998654322 23457889999999987 6799999999999999999996655321 1111122
Q ss_pred HHhhhc-cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 912 IDHMFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 912 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
...... ...+.. ...++.+++.+||+.||++|||++++++.|+.
T Consensus 228 ~~~~~~~~~~~~~--------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 228 LQFYEDRHQLPAP--------KAAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp HHHHHTTCCCCCC--------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred HHHhhccCCCCCC--------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 221111 122221 12347788999999999999999999999864
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=346.38 Aligned_cols=262 Identities=22% Similarity=0.355 Sum_probs=211.0
Q ss_pred ccHHHHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc------hhhHHHHHHHHHHHhCC-CCCcee
Q 037111 679 LVYEEIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE------TTHQKEFLSEIKALTGV-RHRNIV 750 (964)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l-~h~niv 750 (964)
..+.......++|++.+.||+|+||.||+|+.+ +|+.||||++...... ....+.+.+|+.+++++ +||||+
T Consensus 84 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv 163 (365)
T 2y7j_A 84 PDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHII 163 (365)
T ss_dssp CHHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred ccchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence 334444555678999999999999999999875 7999999998643211 12245678899999998 799999
Q ss_pred eEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc
Q 037111 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE 830 (964)
Q Consensus 751 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~ 830 (964)
++++++......++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 164 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 164 TLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp CEEEEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 9999999999999999999999999999754 3489999999999999999999999 9999999999999999999
Q ss_pred eEEeccCcccccCCCCCCcccccccccccccccccc------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC
Q 037111 831 AHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 831 ~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~ 904 (964)
+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 239 ikl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--------- 308 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--------- 308 (365)
T ss_dssp EEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS---------
T ss_pred EEEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC---------
Confidence 9999999998765443 2345679999999999863 35889999999999999999999998532
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.......+. .........+.+++.+||+.||++|||+.++++
T Consensus 309 --~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 309 --RQILMLRMIMEGQYQFSS--PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp --SHHHHHHHHHHTCCCCCH--HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --CHHHHHHHHHhCCCCCCC--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122333333333333221 111223456888999999999999999999986
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=348.11 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=205.5
Q ss_pred ccccceeecCCceeEEEEEeC-----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeE
Q 037111 691 FDESFCIGRGGYGSVYKAELP-----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSF 763 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 763 (964)
|+..+.||+|+||+||++.++ +++.||||++... ........+.+|+.++++++||||+++++++.+. ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 489999999999999998653 6788999999753 3344567799999999999999999999999874 6789
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 112 lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 9999999999999996543 89999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC--CCC-CCChhHHHHhhhc
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS--SLP-GANMNEAIDHMFD 917 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~--~~~-~~~~~~~~~~~~~ 917 (964)
..... .....+++.|+|||.+.+..++.++||||+|+++|||++|+.||......... ... .............
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 54321 23445788899999999989999999999999999999999998643221000 000 0001111222222
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.....+. ...++..+.+++.+||+.||++|||++++++.|+
T Consensus 266 ~~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 266 RGERLPR----PDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp TTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCC----CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 2222111 1234466889999999999999999999999886
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=342.21 Aligned_cols=262 Identities=19% Similarity=0.286 Sum_probs=200.0
Q ss_pred hccccc-ceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEE
Q 037111 689 NNFDES-FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 689 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (964)
+.|++. +.||+|+||.||+|... +++.||||++.... ......+.+|+.++.++ +||||+++++++.+++..++|
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 467774 78999999999999754 78999999987532 33456788999999884 799999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc---eEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE---AHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~a~~~ 842 (964)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 90 FEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred EEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 99999999999997653 488999999999999999999999 9999999999999998776 999999999765
Q ss_pred CCCCC-------Ccccccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCC---
Q 037111 843 KPDSS-------NWSELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGAN--- 907 (964)
Q Consensus 843 ~~~~~-------~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~--- 907 (964)
..... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.........+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 43211 1223468999999999875 55889999999999999999999999754432211111111
Q ss_pred -hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 -MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.......+. .........+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFPD--KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHCCCCCCH--HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHhccCcccCc--hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 11233333333333221 111223456888999999999999999999986
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=337.81 Aligned_cols=247 Identities=20% Similarity=0.324 Sum_probs=201.9
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (964)
..++|++.+.||+|+||.||+|... +++.||||++............+.+|+..+..+ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3467999999999999999999765 799999999986555555667888999999888 89999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC--------------
Q 037111 765 VYEYLERGSLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-------------- 828 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-------------- 828 (964)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997642 24589999999999999999999999 99999999999999844
Q ss_pred -----CceEEeccCcccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC
Q 037111 829 -----YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS 902 (964)
Q Consensus 829 -----~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~ 902 (964)
..+||+|||.+....... ...|++.|+|||.+.+. .++.++||||||+++|+|++|..|+...
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------- 234 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------- 234 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-------
T ss_pred ccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-------
Confidence 479999999998765433 23589999999999866 5668999999999999999998775311
Q ss_pred CCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 903 LPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+.....+.. .......+.+++.+||+.||++|||+.++++
T Consensus 235 -------~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 235 -------DQWHEIRQGRLPRI-----PQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp -------HHHHHHHTTCCCCC-----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------hHHHHHHcCCCCCC-----CcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11222222222211 1123355788899999999999999999975
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=352.13 Aligned_cols=262 Identities=20% Similarity=0.250 Sum_probs=198.2
Q ss_pred hcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchh---------hHHHHHHHHHHHhCCCCCceeeEEee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETT---------HQKEFLSEIKALTGVRHRNIVKFYGF 755 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~ 755 (964)
++|++.+.||+|+||.||+|... ++..||||++........ ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999775 578899999875322111 12346778899999999999999999
Q ss_pred eec----CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC--
Q 037111 756 CSH----ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-- 829 (964)
Q Consensus 756 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-- 829 (964)
+.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCC
Confidence 987 67899999999 899999997654 589999999999999999999999 999999999999999887
Q ss_pred ceEEeccCcccccCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC
Q 037111 830 EAHVSDFGTAKLLKPDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS 902 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~ 902 (964)
.+||+|||+++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----- 265 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK----- 265 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT-----
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc-----
Confidence 999999999986643221 12345789999999999999999999999999999999999999853211
Q ss_pred CCCCChhHHHHhhhccCCCCCcccc-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 903 LPGANMNEAIDHMFDARLPPPWLEV-GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
................+...... .....+.++.+++.+||+.||++||++++|++.|+.
T Consensus 266 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 266 --DPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp --CHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred --ccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 00001111111112222110000 001334568899999999999999999999999974
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=337.55 Aligned_cols=252 Identities=26% Similarity=0.357 Sum_probs=204.9
Q ss_pred hcccccc-eeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESF-CIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|.+.. .||+|+||.||+|.+. ++..||||+++.. ......+.+.+|+.++++++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4566666 8999999999999753 5778999998753 2344567899999999999999999999999 4567899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999999643 34589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 DSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+....+.....
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----------~~~~~~~i~~~~~ 231 (287)
T 1u59_A 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----------GPEVMAFIEQGKR 231 (287)
T ss_dssp CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------THHHHHHHHTTCC
T ss_pred CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----------HHHHHHHHhcCCc
Confidence 4322 223356889999999998889999999999999999998 999985322 1233333322221
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
++. ....+..+.+++.+||+.||++||++.++++.|+
T Consensus 232 ~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 232 MEC-----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-----CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 1234456888999999999999999999999885
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=333.19 Aligned_cols=253 Identities=25% Similarity=0.350 Sum_probs=204.8
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|++.+.||+|+||.||+|+.+ +++.||||++..... ......+.+|+.+++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 3568999999999999999999765 789999999864332 33457789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 84 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999999643 3489999999999999999999999 9999999999999999999999999999765432
Q ss_pred C--CCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 846 S--SNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 846 ~--~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
. .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ..............
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----------~~~~~~~~~~~~~~ 228 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS----------CQEYSDWKEKKTYL 228 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT----------SHHHHHHHTTCTTS
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH----------HHHHHHhhhccccc
Confidence 2 22345578999999999987775 77899999999999999999998643221 01111111111111
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+ ........+.+++.+||+.||++|||++|+++
T Consensus 229 ~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 N----PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp T----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C----chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1 11223456778899999999999999999875
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-38 Score=346.62 Aligned_cols=264 Identities=25% Similarity=0.331 Sum_probs=207.7
Q ss_pred hcccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee--cCce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS--HARH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 761 (964)
++|+..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++. +...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 5799999999999999999984 46788999998743 3444567899999999999999999999886 4567
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 8999999999999999976432 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC---CCCCCChhHHHHhh
Q 037111 842 LKPDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS---SLPGANMNEAIDHM 915 (964)
Q Consensus 842 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~ 915 (964)
....... .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||......... ..............
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 6544321 23345788899999999988999999999999999999999998643321100 00011111111222
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+. ...++..+.+++.+||+.||++|||++++++.|+
T Consensus 257 ~~~~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 257 LEEGQRLPA----PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hhcccCCCC----CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 222221111 1234456888999999999999999999999885
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-38 Score=355.04 Aligned_cols=202 Identities=26% Similarity=0.438 Sum_probs=165.2
Q ss_pred HHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCc--e
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHAR--H 761 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 761 (964)
...++|+..+.||+|+||.||+|.. .+|+.||||++............+.+|+.+++.+. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3467899999999999999999965 47899999999765555566678889999999997 999999999997543 7
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 899999998 5999999653 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCC---------------------CCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 842 LKPD---------------------SSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 842 ~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 5321 111234579999999999886 6789999999999999999999999853
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=339.20 Aligned_cols=248 Identities=25% Similarity=0.421 Sum_probs=206.9
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
+.|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|+.++++++||||+++++++.+....++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 4689999999999999999965 4688999999875432 3345789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 174 (303)
T 3a7i_A 101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174 (303)
T ss_dssp CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence 9999999999954 3589999999999999999999999 999999999999999999999999999987765544
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+....+.....+ ..
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~-~~--- 239 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----------PMKVLFLIPKNNPP-TL--- 239 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHHHHHHSCCC-CC---
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC-----------HHHHHHHhhcCCCC-CC---
Confidence 4456678999999999999999999999999999999999999975322 12222222222111 11
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||+.||++|||+.++++
T Consensus 240 -~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 240 -EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp -CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -ccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1123345788899999999999999999975
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=359.31 Aligned_cols=197 Identities=24% Similarity=0.363 Sum_probs=158.3
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-----Ccee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-----ARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~ 762 (964)
++|++.+.||+|+||+||+|+.+ +++.||||++..........+.+.+|+.+++.++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57999999999999999999654 78999999997655555666789999999999999999999999943 3578
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+||||+. |+|.+++... ..+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+..
T Consensus 133 ~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEECCCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEeccc-cchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 99999985 6999999643 4589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC---------------------------Ccccccccccccccccc-ccCCCCcchhHHHHHHHHHHHHhCCCC
Q 037111 843 KPDSS---------------------------NWSELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGQHP 891 (964)
Q Consensus 843 ~~~~~---------------------------~~~~~~g~~~y~aPE~~-~~~~~~~~sDvwSlGvll~el~tg~~p 891 (964)
..... .....+||+.|+|||++ .+..++.++|||||||++|||++|..|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 43211 12345789999999976 466799999999999999999995443
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=361.64 Aligned_cols=252 Identities=24% Similarity=0.370 Sum_probs=203.1
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|+.+ ++..||+|++............+.+|+.+++.++||||+++++++.+....|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999765 7889999999765444444577899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC---CceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE---YEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~a~~~~ 843 (964)
||+++|+|.+++.... .+++..+..++.||++||+|||++ +|+||||||+||+++.. +.+||+|||++....
T Consensus 116 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 9999999999986653 488999999999999999999999 99999999999999764 459999999998765
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.. ....+....+.......+
T Consensus 191 ~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~~~i~~~~~~~~ 257 (494)
T 3lij_A 191 NQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG-----------QTDQEILRKVEKGKYTFD 257 (494)
T ss_dssp TTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCCC
T ss_pred CCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCC
Confidence 432 234567999999999876 5699999999999999999999999753 223344555544443322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ......+..+.+++.+||..||++|||+.++++
T Consensus 258 ~--~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 258 S--PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp S--GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c--hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 1 112234456788899999999999999999874
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=339.62 Aligned_cols=248 Identities=26% Similarity=0.411 Sum_probs=197.5
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-ceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-RHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.. |+.||||++... ...+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 468999999999999999999875 889999998642 2346789999999999999999999997554 5789999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.......+++..+..++.|+++|++|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 999999999999765544578899999999999999999999 99999999999999999999999999997654332
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+....+........
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-----------~~~~~~~~~~~~~~~~-- 235 (278)
T 1byg_A 172 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----------LKDVVPRVEKGYKMDA-- 235 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----------GGGHHHHHTTTCCCCC--
T ss_pred ---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHhcCCCCCC--
Confidence 23357889999999999999999999999999999998 999975322 1222233222211111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+..+.+++.+||+.||++||++.++++.|+
T Consensus 236 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 236 ---PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 1223456888999999999999999999999885
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=336.81 Aligned_cols=253 Identities=21% Similarity=0.329 Sum_probs=201.2
Q ss_pred hhcccccceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|+..+.||+|+||.||+|.... +..||+|++.... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 4679999999999999999997542 2359999987532 34456789999999999999999999999875 4568
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 9999999999999997643 3488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 844 PDSS-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 844 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+....+......
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-----------~~~~~~~~~~~~~ 233 (281)
T 3cc6_A 165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-----------KDVIGVLEKGDRL 233 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-----------GGHHHHHHHTCCC
T ss_pred cccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-----------HHHHHHHhcCCCC
Confidence 4332 2234457889999999998899999999999999999998 9999853221 1222222222111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+. ....+..+.+++.+||+.||++||++.++++.|+
T Consensus 234 ~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 234 PK-----PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 11 1123355888999999999999999999999885
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-38 Score=344.52 Aligned_cols=252 Identities=23% Similarity=0.374 Sum_probs=196.2
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCe----EEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||.||+|++. +++. ||+|.+... ........+.+|+.++++++||||+++++++..+. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 57999999999999999999754 4554 477776542 23445678999999999999999999999998765 78
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+|+||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 9999999999999997643 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
..... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+....+.....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----------~~~~~~~~~~~~ 237 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----------SEISSILEKGER 237 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----------GGHHHHHHTTCC
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH-----------HHHHHHHHcCCC
Confidence 43322 223456788999999999999999999999999999999 9999863221 122222222211
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+. .......+.+++.+||+.||++||+++|+++.|+
T Consensus 238 ~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 238 LPQ-----PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111 1123445788999999999999999999999885
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=333.88 Aligned_cols=252 Identities=25% Similarity=0.359 Sum_probs=198.6
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.+ ++..||+|++.... .......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 357999999999999999999764 68899999987543 2334578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCcccc
Q 037111 767 EYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKL 841 (964)
Q Consensus 767 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~ 841 (964)
||+++|+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++..
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 999999999998653 235689999999999999999999999 99999999999999 4567899999999976
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
..... ......|++.|+|||.+. +.++.++||||+|+++|||++|+.||... ...+...........
T Consensus 177 ~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~-----------~~~~~~~~~~~~~~~ 243 (285)
T 3is5_A 177 FKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT-----------SLEEVQQKATYKEPN 243 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHCCCC
T ss_pred cCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC-----------CHHHHHhhhccCCcc
Confidence 65432 234557899999999875 56899999999999999999999998532 122222222211111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.... .......+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~---~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 244 YAVE---CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCC-----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cccc---cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1100 0112345778899999999999999999985
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=336.89 Aligned_cols=245 Identities=23% Similarity=0.400 Sum_probs=204.3
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-------
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------- 758 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 758 (964)
...+|+..+.||+|+||.||+|+.. +++.||+|++.... ..+.+|+.++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 3467999999999999999999775 79999999986432 246689999999999999999999864
Q ss_pred ---------CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 759 ---------ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 759 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
....++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 45689999999999999999876656799999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChh
Q 037111 830 EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN 909 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~ 909 (964)
.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|||++|..|+... .
T Consensus 160 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------------~ 225 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------------S 225 (284)
T ss_dssp EEEECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------------H
T ss_pred CEEECcchhheecccccc-ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------------H
Confidence 999999999987654432 23456899999999999999999999999999999999999886321 1
Q ss_pred HHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 910 EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..........++.. ....+.+++.+||+.||++||++.|+++.|+
T Consensus 226 ~~~~~~~~~~~~~~--------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 226 KFFTDLRDGIISDI--------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp HHHHHHHTTCCCTT--------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhhccccccc--------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22222222222221 2244778889999999999999999999874
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=373.39 Aligned_cols=250 Identities=21% Similarity=0.323 Sum_probs=210.9
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
..++|++.+.||+|+||.||+|+.+ +++.||||+++... ........+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4678999999999999999999765 68889999987431 1223346678899999887 6999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||++||+|.+++.... .+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+...
T Consensus 419 lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999997654 489999999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~-----------~~~~~~~~~i~~~~~~~p 562 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-----------EDEDELFQSIMEHNVAYP 562 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHSSCCCCC
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC-----------CCHHHHHHHHHhCCCCCC
Confidence 555555667899999999999999999999999999999999999999752 233455666665544432
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCH-----HHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNM-----QIVC 958 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~-----~evl 958 (964)
.....++.+++.+||..||++||++ +||+
T Consensus 563 ------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~ 596 (674)
T 3pfq_A 563 ------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596 (674)
T ss_dssp ------TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred ------ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence 1234567888899999999999997 6665
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=346.02 Aligned_cols=264 Identities=27% Similarity=0.401 Sum_probs=196.4
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHH--HHhCCCCCceeeEEeeeec-----Cc
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIK--ALTGVRHRNIVKFYGFCSH-----AR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~--~l~~l~h~niv~l~~~~~~-----~~ 760 (964)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.+ .+..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 56899999999999999999987 5899999998632 1233444444 4556899999999985532 34
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEeccCCCCCeEECCCCceEEe
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC------RPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
..++||||+++|+|.+++.... .++..+..++.||++||+|||+.. +++|+||||||+||+++.++.+||+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred eEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 6789999999999999996544 588899999999999999999873 3389999999999999999999999
Q ss_pred ccCcccccCCCC--------CCcccccccccccccccccc-------CCCCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 037111 835 DFGTAKLLKPDS--------SNWSELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899 (964)
Q Consensus 835 Dfg~a~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~ 899 (964)
|||+++...... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 999998765322 11224569999999999886 456779999999999999999988764433221
Q ss_pred CCCCC------CCChhHHHHhh-hc----cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 900 DSSLP------GANMNEAIDHM-FD----ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 900 ~~~~~------~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..... .....+..... .. ..++.. ..........+.+++.+||+.||++|||++|+++.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA--WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT--CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcc--cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 11110 00001111111 11 112211 1223456678999999999999999999999999885
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=346.83 Aligned_cols=250 Identities=20% Similarity=0.318 Sum_probs=196.0
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------e
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------H 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 761 (964)
++|+..+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 5799999999999999999976 47999999998654445555678899999999999999999999997653 4
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||+ +++|.+++.. ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 69999999 7899999975 3488999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc---
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--- 917 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 917 (964)
.... .....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||..... .+.+..+..
T Consensus 178 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----------~~~l~~i~~~~g 243 (367)
T 1cm8_A 178 ADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-----------LDQLKEIMKVTG 243 (367)
T ss_dssp CCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHHHC
T ss_pred cccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHHhcC
Confidence 5432 334578999999999887 6799999999999999999999999863321 111111110
Q ss_pred ----------------------cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ----------------------ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+..............+.+++.+||..||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 244 TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 011111111112233456788999999999999999999986
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=357.63 Aligned_cols=261 Identities=20% Similarity=0.279 Sum_probs=196.1
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------c
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------R 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 760 (964)
.++|+..+.||+|+||+||+|.. .+++.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46799999999999999999965 4688999999976544555667889999999999999999999999654 4
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..|+||||+++ ++.+.+.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 67999999986 57776632 388999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC---------C----CCCCCC
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD---------S----SLPGAN 907 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~---------~----~~~~~~ 907 (964)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ . .....
T Consensus 213 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~- 290 (464)
T 3ttj_A 213 TAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 290 (464)
T ss_dssp ----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS-
T ss_pred ecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc-
Confidence 76543 223456899999999999999999999999999999999999999864321000 0 00000
Q ss_pred hhHHHHhhhccCC--CC------------CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 MNEAIDHMFDARL--PP------------PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 ~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
............ .. +...........++.+++.+||..||++|||++|+++
T Consensus 291 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 291 -QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp -CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000011110000 00 0000111223567889999999999999999999875
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=338.02 Aligned_cols=250 Identities=22% Similarity=0.311 Sum_probs=204.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 467999999999999999999765 78999999987432 223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~~~ 843 (964)
||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||.+....
T Consensus 86 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 86 QLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred EcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 9999999999996543 488999999999999999999999 99999999999999 788999999999997544
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.. ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||... ...+....+.......+
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----------~~~~~~~~i~~~~~~~~ 227 (304)
T 2jam_A 161 NG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE-----------TESKLFEKIKEGYYEFE 227 (304)
T ss_dssp CB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS-----------CHHHHHHHHHHCCCCCC
T ss_pred CC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----------CHHHHHHHHHcCCCCCC
Confidence 32 223456899999999999999999999999999999999999997532 22233444433332211
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ......+..+.+++.+||+.||++||+++++++
T Consensus 228 ~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 228 S--PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp T--TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred c--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 111233456888999999999999999999975
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=371.16 Aligned_cols=250 Identities=25% Similarity=0.351 Sum_probs=199.4
Q ss_pred ccccc-eeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 691 FDESF-CIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 691 ~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
+.+.. .||+|+||.||+|.++ ++..||||+++.. ......+++.+|+.++++++|||||++++++.. +..++||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC-CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC-CChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 33334 7999999999999764 4567999999753 233456789999999999999999999999976 5689999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 415 E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp ECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred EeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 999999999999654 34589999999999999999999999 99999999999999999999999999998765433
Q ss_pred CCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 847 SNW---SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 847 ~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....+......+
T Consensus 491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----------~~~~~~~i~~~~~~~ 559 (613)
T 2ozo_A 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----------GPEVMAFIEQGKRME 559 (613)
T ss_dssp -----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------SHHHHHHHHTTCCCC
T ss_pred ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC-----------HHHHHHHHHcCCCCC
Confidence 221 22345689999999999999999999999999999998 999975322 223333333322111
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
. ...++..+.+++.+||+.||++||++++|++.|+
T Consensus 560 ~-----p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 560 C-----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp C-----CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred C-----CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 1234567889999999999999999999999885
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-37 Score=331.80 Aligned_cols=248 Identities=24% Similarity=0.370 Sum_probs=201.9
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec----CceeEE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH----ARHSFL 764 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 764 (964)
.|+..+.||+|+||.||+|.. .++..||+|++..........+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 478888999999999999966 467889999998665556667789999999999999999999999865 456899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEEC-CCCceEEeccCcccc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLD-FEYEAHVSDFGTAKL 841 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~-~~~~~kl~Dfg~a~~ 841 (964)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||++..
T Consensus 107 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999997643 488999999999999999999998 7 99999999999998 789999999999975
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ......|++.|+|||.+. +.++.++||||+|+++|+|++|+.||.... ........+.....+
T Consensus 182 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----------~~~~~~~~~~~~~~~ 248 (290)
T 1t4h_A 182 KRAS--FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----------NAAQIYRRVTSGVKP 248 (290)
T ss_dssp CCTT--SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----------SHHHHHHHHTTTCCC
T ss_pred cccc--ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC----------cHHHHHHHHhccCCc
Confidence 4433 233557899999999876 459999999999999999999999985321 122333333332222
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
... .......+.+++.+||+.||++|||++++++
T Consensus 249 ~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 ASF----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGG----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccc----CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 211 1122345788999999999999999999986
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=334.61 Aligned_cols=248 Identities=25% Similarity=0.413 Sum_probs=205.5
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 468999999999999999999765 577899999864321 222346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999997654 488999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+....+.......+
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----------~~~~~~~~~~~~~~~~-- 232 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS-----------HTETHRRIVNVDLKFP-- 232 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----------HHHHHHHHHTTCCCCC--
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC-----------HhHHHHHHhccccCCC--
Confidence 2234578999999999999999999999999999999999999985322 2233333333322211
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++||+++++++
T Consensus 233 ----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 233 ----PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 122345778899999999999999999975
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=349.30 Aligned_cols=261 Identities=23% Similarity=0.316 Sum_probs=205.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.. +++.||+|++... ........+.+|+.++++++||||+++++++.+++..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 357999999999999999999765 7889999998753 23445578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||++.......
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 186 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186 (360)
T ss_dssp CCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred ECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence 9999999999997654 4889999999999999999999831 79999999999999999999999999987543221
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC--------------------------
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------------------------- 900 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------------------------- 900 (964)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||........
T Consensus 187 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 187 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp ------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred --ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 2345789999999999999999999999999999999999999864322100
Q ss_pred -----CCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 901 -----SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 901 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.....+..+.+.....+... .......+.+++.+||+.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPPKLP----SGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCCCCC----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCCCcccchhhhhHHhccCCCCCC----cccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000111111222333222222110 1123446888999999999999999999975
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=346.02 Aligned_cols=258 Identities=22% Similarity=0.298 Sum_probs=198.3
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc---hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE---TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
...++|+..+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999775 6899999998643211 1112467899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred eEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 9999999986 8999886543 3588889999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc--
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-- 918 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 918 (964)
............||+.|+|||.+.+. .++.++||||+||++|||++|..||..... .+....++..
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-----------~~~~~~i~~~~~ 230 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-----------LDQLTRIFETLG 230 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHHHC
T ss_pred ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHHHHcC
Confidence 76555555566789999999998764 488999999999999999999999753221 1222221110
Q ss_pred -C-------------------CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 -R-------------------LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 -~-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .+.............++.+++.+||..||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 231 TPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0000000011223456888999999999999999999986
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=344.32 Aligned_cols=255 Identities=25% Similarity=0.402 Sum_probs=203.5
Q ss_pred hhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|+..+.||+|+||.||+|+. .+++.||||++... ........+.+|+.++++++||||+++++++.+...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 46799999999999999999974 35778999998643 234455688999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEE
Q 037111 762 SFLVYEYLERGSLARILSSETA-----TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHV 833 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl 833 (964)
.++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999976432 3488999999999999999999999 9999999999999984 446999
Q ss_pred eccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhH
Q 037111 834 SDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||... ...+
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-----------~~~~ 253 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----------SNQE 253 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----------CHHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc-----------CHHH
Confidence 99999975543321 2234567889999999999999999999999999999998 88897522 2233
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+.....+.. ....+..+.+++.+||+.||++||++.++++.|+
T Consensus 254 ~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 254 VLEFVTSGGRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCC-----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 3333333322211 1123456888999999999999999999999874
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=334.80 Aligned_cols=251 Identities=24% Similarity=0.359 Sum_probs=197.8
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|.....||+|+||.||+|.. .+++.||||++... .......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 455566899999999999975 46889999998753 233456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceEEeccCcccccCCCC
Q 037111 769 LERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 769 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~ 846 (964)
+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.+.......
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999997642 33567889999999999999999999 9999999999999988 8999999999998765544
Q ss_pred CCccccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 847 SNWSELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.......|++.|+|||.+.+.. ++.++||||||+++|+|++|+.||..... ..............+..
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~~~~~~~~~~~~~~~~ 247 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE----------PQAAMFKVGMFKVHPEI 247 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS----------HHHHHHHHHHHCCCCCC
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc----------hhHHHHhhccccccccc
Confidence 3344567899999999987654 88999999999999999999999853221 11111111111111111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||+.||++||++.++++
T Consensus 248 ----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 248 ----PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1123456788899999999999999999975
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=371.69 Aligned_cols=246 Identities=27% Similarity=0.375 Sum_probs=199.4
Q ss_pred ceeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|.+. .++.||||+++.........+++.+|+.++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999553 46789999998655555567889999999999999999999999965 558899999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC---
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--- 848 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--- 848 (964)
|+|.+++... ..+++..+..++.||+.||+|||++ +||||||||+||+++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 9999999654 3489999999999999999999999 9999999999999999999999999999876544321
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.. ....+....+......+.
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~-----------~~~~~~~~~i~~~~~~~~---- 593 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----------MKGSEVTAMLEKGERMGC---- 593 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT-----------CCHHHHHHHHHTTCCCCC----
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHcCCCCCC----
Confidence 223346788999999999999999999999999999998 9999753 222333333333222211
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...++.++.+++.+||+.||++||++++|++.|+
T Consensus 594 -p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 594 -PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp -CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1234567889999999999999999999999886
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=342.87 Aligned_cols=254 Identities=23% Similarity=0.398 Sum_probs=202.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCe--EEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDT--VAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
.++|+..+.||+|+||.||+|+.. ++.. ||+|++.... .....+.+.+|+.+++++ +||||+++++++.+.+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 468999999999999999999764 4554 4999887432 333446788999999999 8999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 764 LVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
+||||+++|+|.+++.... ...+++..++.++.|+++||+|||++ +|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999997543 34689999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCCh
Q 037111 830 EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~ 908 (964)
.+||+|||+++...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||... ..
T Consensus 180 ~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-----------~~ 247 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----------TC 247 (327)
T ss_dssp CEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----------CH
T ss_pred eEEEcccCcCccccccc-cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC-----------cH
Confidence 99999999997433221 1223456789999999998889999999999999999998 99997532 22
Q ss_pred hHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+....+........ .......+.+++.+||+.||++|||++++++.|+
T Consensus 248 ~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 248 AELYEKLPQGYRLEK-----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HHHHHHGGGTCCCCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 333333333221111 1123456888999999999999999999999875
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-37 Score=340.17 Aligned_cols=261 Identities=24% Similarity=0.350 Sum_probs=205.8
Q ss_pred HHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhC--CCCCceeeEEeeeecCc-
Q 037111 684 IIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTG--VRHRNIVKFYGFCSHAR- 760 (964)
Q Consensus 684 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~- 760 (964)
.....++|+..+.||+|+||.||+|+. +++.||||++... ....+.+|++++.. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 344567899999999999999999988 4899999998532 23567778888766 78999999999998875
Q ss_pred ---eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCCeEECCCC
Q 037111 761 ---HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH--------HECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 761 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
..++||||+++|+|.+++... .+++..++.++.|++.|++||| +. +|+||||||+||+++.++
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTS
T ss_pred ccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCC
Confidence 789999999999999999653 4889999999999999999999 66 999999999999999999
Q ss_pred ceEEeccCcccccCCCCCC----ccccccccccccccccccC------CCCcchhHHHHHHHHHHHHhC----------C
Q 037111 830 EAHVSDFGTAKLLKPDSSN----WSELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------Q 889 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDvwSlGvll~el~tg----------~ 889 (964)
.+||+|||++......... .....||+.|+|||.+.+. .++.++||||||+++|||+|| +
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 9999999999876544322 2345789999999998765 234689999999999999999 5
Q ss_pred CCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc-ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 890 HPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL-EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 890 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.||..... ...........+......+... .....++...+.+++.+||+.||++|||+.+|++.|+
T Consensus 265 ~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 265 LPYYDLVP------SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CTTTTTSC------SSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cCccccCc------CcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 55532211 1112223333333333322211 1123467778999999999999999999999999885
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=332.08 Aligned_cols=249 Identities=24% Similarity=0.383 Sum_probs=197.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+.+ +|+.||||++.... ........+.+|+..++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357999999999999999999775 78999999986432 1223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+......
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999997653 488999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......+++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||... ........+.......+
T Consensus 165 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~- 231 (276)
T 2h6d_A 165 E-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-----------HVPTLFKKIRGGVFYIP- 231 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHCCCCCC-
T ss_pred c-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-----------cHHHHHHHhhcCcccCc-
Confidence 2 2234568999999999988765 58999999999999999999998532 22233333333322211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++|||++++++
T Consensus 232 -----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 232 -----EYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----hhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 112345788899999999999999999986
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=360.83 Aligned_cols=252 Identities=24% Similarity=0.373 Sum_probs=209.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||||++..... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357999999999999999999765 789999999865432 234567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~~ 842 (964)
|||+.+|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+++..
T Consensus 105 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 9999999999999654 3489999999999999999999999 99999999999999 56789999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.. ....+....+.......
T Consensus 180 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~~~i~~~~~~~ 246 (484)
T 3nyv_A 180 EASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG-----------ANEYDILKKVEKGKYTF 246 (484)
T ss_dssp CCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCC
T ss_pred cccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC-----------CCHHHHHHHHHcCCCCC
Confidence 5443 3345679999999999876 699999999999999999999999753 22334455554444332
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+. ......+..+.+++.+||.+||++|||++|+++
T Consensus 247 ~~--~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 247 EL--PQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CS--GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC--cccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 21 122334566788999999999999999999875
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=343.97 Aligned_cols=258 Identities=22% Similarity=0.350 Sum_probs=200.0
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--------
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-------- 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 758 (964)
.++|++.+.||+|+||.||+|+. .+|+.||||++............+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46899999999999999999976 578999999987654444445678899999999999999999999977
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
.+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 3468999999986 8888775443 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC----CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 839 AKLLKPDS----SNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 839 a~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
++...... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ....+.
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--------~~~~i~ 242 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH--------QLALIS 242 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHH
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHH
Confidence 98665322 22345578999999999876 458999999999999999999999986432100 000111
Q ss_pred hhhccCCCCCcc------------------ccchHHH------HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWL------------------EVGVEDK------LKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~------------------~~~~~~~------~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.... ..++... .....+. ...+.+++.+||..||++|||++|+++
T Consensus 243 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 243 QLCG-SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHC-CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhC-CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 1110 0110000 0001111 245788999999999999999999975
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=352.29 Aligned_cols=257 Identities=18% Similarity=0.190 Sum_probs=200.8
Q ss_pred hcccccceeecCCceeEEEEEeCC---------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceee--------
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS---------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK-------- 751 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------- 751 (964)
++|++.+.||+|+||.||+|+... ++.||||++... ..+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 579999999999999999997763 789999998642 35778999999999999987
Q ss_pred -------EEeeeec-CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCe
Q 037111 752 -------FYGFCSH-ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNV 823 (964)
Q Consensus 752 -------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Ni 823 (964)
+++++.. +...++||||+ +|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NI 190 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENI 190 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGE
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHE
Confidence 6677765 67899999999 89999999876456699999999999999999999999 999999999999
Q ss_pred EECCCC--ceEEeccCcccccCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 824 LLDFEY--EAHVSDFGTAKLLKPDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 824 ll~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
+++.++ .+||+|||+++....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 999999999976653321 12344789999999999999999999999999999999999999864
Q ss_pred cccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 895 LSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..... ...........................+..+.+++.+||+.||++||++++|++.|+
T Consensus 271 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 271 CLPNT------EDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp GTTCH------HHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred CCcCH------HHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 32100 001111111111111100000001122456888899999999999999999999885
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=347.39 Aligned_cols=265 Identities=25% Similarity=0.381 Sum_probs=205.8
Q ss_pred hhcccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc--
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-- 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 760 (964)
.++|+..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 35689999999999999999973 36889999998742 3445578999999999999999999999987654
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred ceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 7899999999999999997653 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc----CCCCCCCChhHHHH
Q 037111 841 LLKPDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS----DSSLPGANMNEAID 913 (964)
Q Consensus 841 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~ 913 (964)
........ .....++..|+|||.+.+..++.++||||||+++|||+||..|+....... ............+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 76544321 123456778999999998889999999999999999999999875321100 00000000011111
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+......+. ...++..+.+++.+||+.||++|||+.+|++.|+
T Consensus 274 ~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 274 ELLKNNGRLPR----PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHTTCCCCC----CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHhhcCCCCCC----CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 22211111111 1234456888999999999999999999999886
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=339.42 Aligned_cols=258 Identities=19% Similarity=0.284 Sum_probs=198.8
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeee-ecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC-SHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 764 (964)
..++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+|+.+++.++|++++..++++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 346899999999999999999975 5788999998754322 13477899999999887776666655 66778899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCcccc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKL 841 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~ 841 (964)
||||+ +|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 83 v~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 99999 889999997543 3489999999999999999999999 99999999999999 7889999999999987
Q ss_pred cCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 842 LKPDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 842 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ .+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------~~~~~~ 229 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK--------RQKYER 229 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS--------SSHHHH
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh--------hhhhhh
Confidence 654432 12345789999999999999999999999999999999999999874332111 111111
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.....+.+ ........+..+.+++.+||+.||++|||+++|++.|+
T Consensus 230 ~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 230 ISEKKMSTP-IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHHHSC-HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred hhcccccch-hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 111111111 00011123456889999999999999999999999885
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=358.37 Aligned_cols=252 Identities=23% Similarity=0.370 Sum_probs=205.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc-----------hhhHHHHHHHHHHHhCCCCCceeeEEee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE-----------TTHQKEFLSEIKALTGVRHRNIVKFYGF 755 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~niv~l~~~ 755 (964)
.++|++.+.||+|+||+||+|+.+ +++.||||++...... ....+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 468999999999999999999765 6789999998753221 1335678999999999999999999999
Q ss_pred eecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceE
Q 037111 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAH 832 (964)
Q Consensus 756 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~k 832 (964)
+.+....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999996643 489999999999999999999999 999999999999998876 699
Q ss_pred EeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 833 VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
|+|||++....... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||.. ....+..
T Consensus 190 l~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~ 256 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG-----------QNDQDII 256 (504)
T ss_dssp ECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHH
T ss_pred EEECCCCEEcCCCC-ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC-----------CCHHHHH
Confidence 99999998765442 334567999999999987 4699999999999999999999999752 2334555
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+.......+. ......+..+.+++.+||.+||++|||++|+++
T Consensus 257 ~~i~~~~~~~~~--~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 257 KKVEKGKYYFDF--NDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHCCCCCCH--HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHcCCCCCCc--cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 555555443321 112234456888999999999999999999875
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-38 Score=343.88 Aligned_cols=261 Identities=23% Similarity=0.375 Sum_probs=207.8
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEee
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGF 755 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 755 (964)
+.....++|++.+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|+.+++++ +||||++++++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 3334457899999999999999999964 356789999987532 334456789999999999 69999999999
Q ss_pred eecCc-eeEEEEEeccCCCHHHHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 037111 756 CSHAR-HSFLVYEYLERGSLARILSSETA--------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSS 820 (964)
Q Consensus 756 ~~~~~-~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp 820 (964)
+...+ ..++||||+++|+|.+++..... ..+++..+..++.|+++|++|||+. +|+||||||
T Consensus 100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp 176 (316)
T 2xir_A 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176 (316)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCcc
Confidence 87754 58999999999999999976432 2278899999999999999999999 999999999
Q ss_pred CCeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccc
Q 037111 821 KNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSS 897 (964)
Q Consensus 821 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~ 897 (964)
+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 256 (316)
T 2xir_A 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256 (316)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence 9999999999999999999876544322 234467889999999999999999999999999999998 9999853221
Q ss_pred ccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 898 LSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+........ .......+.+++.+||+.||++|||+.++++.|+
T Consensus 257 ----------~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 257 ----------DEEFCRRLKEGTRMRA-----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp ----------SHHHHHHHHHTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----------hHHHHHHhccCccCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1122222222211111 0123345788999999999999999999999885
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=338.57 Aligned_cols=257 Identities=18% Similarity=0.263 Sum_probs=201.8
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeee-ecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC-SHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+|+.+++.++|+++++.++++ ......++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 35799999999999999999975 5789999999864322 23578999999999988866666555 566788999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~~ 842 (964)
|||+ +|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++...
T Consensus 84 ~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 9999 889999997433 3589999999999999999999999 99999999999999 47889999999999876
Q ss_pred CCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 843 KPDSSN-------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 843 ~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
...... .....|++.|+|||.+.+..++.++|||||||++|||++|+.||........ ...........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~ 234 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK----RQKYERISEKK 234 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS----SSHHHHHHHHH
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh----hhhhhhhcccc
Confidence 554321 2345789999999999999999999999999999999999999874332111 11111111111
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..... .......+..+.+++.+||+.||++|||+++|++.|+
T Consensus 235 ~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 235 MSTPI-----EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHSCH-----HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cCCch-----HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 11110 0011223456888999999999999999999999885
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-37 Score=334.27 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=202.4
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC--chhhHHHHHHHHHHHhCCCCCceeeEEeeee--cCce
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG--ETTHQKEFLSEIKALTGVRHRNIVKFYGFCS--HARH 761 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 761 (964)
..++|++.+.||+|+||.||+|... +++.||+|++..... .......+.+|+.++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3578999999999999999999764 688999999864321 1234577999999999999999999999984 4568
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++| +.+++.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999886 88888776666799999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CCccccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 842 LKPDS--SNWSELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 842 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
..... .......|++.|+|||.+.+.. ++.++||||+|+++|||++|+.||... ...+....+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----------~~~~~~~~i~~ 227 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-----------NIYKLFENIGK 227 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS-----------SHHHHHHHHHH
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc-----------hHHHHHHHHhc
Confidence 65432 2233556899999999987644 377999999999999999999998532 22333344333
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+ ......+.+++.+||+.||++|||++++++
T Consensus 228 ~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 228 GSYAIP------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CCCCCC------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCCC------CccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 333221 123355778899999999999999999986
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=346.56 Aligned_cols=256 Identities=21% Similarity=0.339 Sum_probs=206.8
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchh---------------hHHHHHHHHHHHhCCCCCceeeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETT---------------HQKEFLSEIKALTGVRHRNIVKF 752 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~E~~~l~~l~h~niv~l 752 (964)
.++|++.+.||+|+||.||+|+. +++.||||++........ ....+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999988 899999999864321111 12788999999999999999999
Q ss_pred EeeeecCceeEEEEEeccCCCHHHH------hhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEE
Q 037111 753 YGFCSHARHSFLVYEYLERGSLARI------LSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLL 825 (964)
Q Consensus 753 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill 825 (964)
++++.+.+..++||||+++|+|.++ +.......+++..+..++.|++.|++|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999999 655446679999999999999999999999 8 99999999999999
Q ss_pred CCCCceEEeccCcccccCCCCCCccccccccccccccccccC-CCCc-chhHHHHHHHHHHHHhCCCCCCccccccCCCC
Q 037111 826 DFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTE-KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL 903 (964)
Q Consensus 826 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~ 903 (964)
+.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||.....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------ 257 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS------ 257 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC------
T ss_pred cCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc------
Confidence 99999999999999876443 33456789999999999877 5666 99999999999999999999863322
Q ss_pred CCCChhHHHHhhhccCCCCCcc-------------ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 904 PGANMNEAIDHMFDARLPPPWL-------------EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+....+.......+.. ..........+.+++.+||+.||++||+++|+++
T Consensus 258 ----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 258 ----LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ----SHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 123333333222221100 0001234456888999999999999999999986
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=351.44 Aligned_cols=254 Identities=21% Similarity=0.289 Sum_probs=192.5
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC------chhhHHHHHHHHHHHhCCCCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG------ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 759 (964)
..++|+..+.||+|+||+||+|.. .+++.||||++..... .......+.+|+.++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 456899999999999999999965 4689999999865321 11122357899999999999999999999865
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceEEecc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAHVSDF 836 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~kl~Df 836 (964)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeec
Confidence 4579999999999999998643 4589999999999999999999999 999999999999997544 5999999
Q ss_pred CcccccCCCCCCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 837 GTAKLLKPDSSNWSELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 837 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
|+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... .. ....
T Consensus 287 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-------~~---~~~~ 355 (419)
T 3i6u_A 287 GHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-------QV---SLKD 355 (419)
T ss_dssp STTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS-------SC---CHHH
T ss_pred ccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc-------hH---HHHH
Confidence 999876543 22345679999999999863 5688899999999999999999999863221 11 1122
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+........ ..........+.+++.+||+.||++||+++|+++
T Consensus 356 ~i~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 356 QITSGKYNFI--PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHTTCCCCC--HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhcCCCCCC--chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 2222222211 1112234456888999999999999999999986
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=348.33 Aligned_cols=255 Identities=22% Similarity=0.322 Sum_probs=202.4
Q ss_pred hhcccccceeecCCceeEEEEEe----CCCCeEEEEEeccccC--chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL----PSGDTVAVKKLHSFTG--ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 760 (964)
.++|++.+.||+|+||.||+|+. .+++.||||+++.... .......+.+|+.+++.+ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999976 4789999999864321 122234567899999998 6999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999997653 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC-CCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 841 LLKPDS-SNWSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 841 ~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ..........+..
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-------~~~~~~~~~~~~~ 280 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE-------KNSQAEISRRILK 280 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS-------CCCHHHHHHHHHH
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc-------cchHHHHHHHHhc
Confidence 654332 22334579999999999985 3478999999999999999999999863322 1112233333333
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCKL 960 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~~ 960 (964)
...+.+ ......+.+++.+||..||++|| +++++++.
T Consensus 281 ~~~~~~------~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 281 SEPPYP------QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCCCCC------TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred cCCCCC------cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 222211 12334577888999999999999 89998753
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=339.11 Aligned_cols=255 Identities=21% Similarity=0.367 Sum_probs=200.9
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee----cCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS----HARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~ 763 (964)
++|+..+.||+|+||.||+|+. .+++.||||++.. ........+.+|+.+++.++||||+++++++. .....+
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC--HEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEec--CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 5799999999999999999976 5789999999864 23445678899999999999999999999986 345789
Q ss_pred EEEEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 764 LVYEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
+||||+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999999752 345689999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCC---------ccccccccccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChh
Q 037111 842 LKPDSSN---------WSELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN 909 (964)
Q Consensus 842 ~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~ 909 (964)
....... .....|++.|+|||.+.+.. ++.++||||||+++|||++|+.||....... ....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~ 257 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG------DSVA 257 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT------SCHH
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc------chhh
Confidence 5422111 12335789999999987554 6889999999999999999999985322110 1111
Q ss_pred HHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 910 EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..... ....+.. ......+.+++.+||+.||++||+++++++.|+
T Consensus 258 ~~~~~--~~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 258 LAVQN--QLSIPQS------PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHHC--C--CCCC------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhhc--cCCCCcc------ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 11111 1111111 123456888999999999999999999999885
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=334.12 Aligned_cols=251 Identities=25% Similarity=0.410 Sum_probs=201.5
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|+..+.||+|+||.||+|..+ +|+.||||++.... ....+.+|+.++++++||||+++++++...+..++|
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 3467999999999999999999765 58999999987432 236788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 103 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 103 MEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp EECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred eecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 9999999999999643 34589999999999999999999999 9999999999999999999999999999876655
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+.....+ ..
T Consensus 179 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~-~~- 245 (314)
T 3com_A 179 MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-----------MRAIFMIPTNPPP-TF- 245 (314)
T ss_dssp BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHHSCCC-CC-
T ss_pred ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHhcCCCc-cc-
Confidence 4444556789999999999999999999999999999999999999853221 1122221111111 10
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........+.+++.+||+.||++|||+.++++
T Consensus 246 -~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 -RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 011223456888999999999999999999975
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=342.38 Aligned_cols=263 Identities=20% Similarity=0.290 Sum_probs=193.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------ 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 760 (964)
.++|+..+.||+|+||.||+|... +++.||||++............+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 357999999999999999999654 6889999999765445556678899999999999999999999997654
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+++ +|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 78999999975 88888842 388999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------CCCCCC----Chh
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------SSLPGA----NMN 909 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------~~~~~~----~~~ 909 (964)
...... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||........ ...+.. ...
T Consensus 176 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 176 TAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cccccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 654332 23345789999999999999999999999999999999999999864322100 000000 000
Q ss_pred HHHHhhhccC--CC------------CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 910 EAIDHMFDAR--LP------------PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 910 ~~~~~~~~~~--~~------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......... .. .+............+.+++.+||..||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000000000 00 00001112334567889999999999999999999986
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=340.83 Aligned_cols=252 Identities=25% Similarity=0.384 Sum_probs=196.9
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec------
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH------ 758 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------ 758 (964)
..++|++.+.||+|+||.||+|+. .+++.||||++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 98 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 98 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence 456899999999999999999976 478999999986432 2236788999999998 79999999999976
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
....++||||+++|+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 175 (326)
T 2x7f_A 99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 175 (326)
T ss_dssp CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcC
Confidence 46789999999999999999876556689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
+..............|++.|+|||.+. +..++.++||||||+++|+|++|+.||.... ......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~ 244 (326)
T 2x7f_A 176 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-----------PMRALF 244 (326)
T ss_dssp TC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHH
T ss_pred ceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc-----------HHHHHH
Confidence 987654433344567899999999987 5668999999999999999999999985322 112222
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+.....+... .......+.+++.+||+.||++||+++++++
T Consensus 245 ~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 245 LIPRNPAPRLK----SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHSCCCCCS----CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhhcCccccCC----ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 22222222110 1122356788889999999999999999986
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=329.79 Aligned_cols=253 Identities=22% Similarity=0.356 Sum_probs=207.9
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|++.+.||+|+||.||+|+.+ +++.||||++............+.+|+.++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4568999999999999999999765 789999999976544455567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC---CceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE---YEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~a~~~ 842 (964)
|||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.+ +.+||+|||++...
T Consensus 100 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999986543 488999999999999999999999 99999999999999764 46999999999866
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.... ......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||... ...+....+.......
T Consensus 175 ~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~-----------~~~~~~~~~~~~~~~~ 241 (287)
T 2wei_A 175 QQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-----------NEYDILKRVETGKYAF 241 (287)
T ss_dssp CCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHCCCCC
T ss_pred cCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC-----------CHHHHHHHHHcCCCCC
Confidence 5432 2234468899999998875 4899999999999999999999997532 2223344443333332
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+. ......+.++.+++.+||+.||++|||++++++
T Consensus 242 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DL--PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CS--GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Cc--hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 21 111233456888999999999999999999986
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=332.86 Aligned_cols=254 Identities=21% Similarity=0.359 Sum_probs=190.6
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|+. .+++.||||++..........+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46899999999999999999976 47889999999764444444445556666688899999999999999999999999
Q ss_pred EeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||+++ +|.+++.. .....+++..+..++.|++.|++|||++. +|+||||||+||+++.++.+||+|||++.....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99975 98888764 24456999999999999999999999842 899999999999999999999999999986654
Q ss_pred CCCCcccccccccccccccc----ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 DSSNWSELAGTYGYVAPELA----YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
... .....|++.|+|||.+ .+..++.++||||+|+++|||++|+.||.... ..............
T Consensus 163 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----------~~~~~~~~~~~~~~ 231 (290)
T 3fme_A 163 DVA-KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG----------TPFQQLKQVVEEPS 231 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS----------CHHHHHHHHHHSCC
T ss_pred ccc-ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC----------chHHHHHHHhccCC
Confidence 322 2334689999999996 56678999999999999999999999985311 11222333333322
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+... .......+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 PQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCCC----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCcc----cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 2211 1123456788999999999999999999875
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-37 Score=343.21 Aligned_cols=246 Identities=15% Similarity=0.143 Sum_probs=196.9
Q ss_pred hhcccccceeecCCceeEEEEE------eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC---CCceeeEEeeeec
Q 037111 688 INNFDESFCIGRGGYGSVYKAE------LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR---HRNIVKFYGFCSH 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 758 (964)
.++|++.+.||+|+||+||+|. ..+++.||||++... ...++..|+.+++.++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 3579999999999999999993 457889999998642 2356777888877776 9999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC--------
Q 037111 759 ARHSFLVYEYLERGSLARILSSE---TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-------- 827 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-------- 827 (964)
.+..++||||+++|+|.+++... ....+++..+..++.||+.||+|||++ +||||||||+||+++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 99999999999999999999752 345699999999999999999999999 9999999999999998
Q ss_pred ---CCceEEeccCcccccCC--CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC
Q 037111 828 ---EYEAHVSDFGTAKLLKP--DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS 902 (964)
Q Consensus 828 ---~~~~kl~Dfg~a~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~ 902 (964)
++.+||+|||+|+.+.. .........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-- 293 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-- 293 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE--
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce--
Confidence 89999999999976542 22334556799999999999999999999999999999999999999853322100
Q ss_pred CCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhc
Q 037111 903 LPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP-NMQIVCKLLS 962 (964)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-s~~evl~~L~ 962 (964)
......+..+ ....+.+++..|++.+|.+|+ +++++.+.|+
T Consensus 294 ------------~~~~~~~~~~-------~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 294 ------------KPEGLFRRLP-------HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp ------------EECSCCTTCS-------SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred ------------eechhccccC-------cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 0011111110 123455677799999999985 6777776654
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=351.81 Aligned_cols=243 Identities=14% Similarity=0.177 Sum_probs=190.1
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHH---HHHhCCCCCceeeEE-------ee
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEI---KALTGVRHRNIVKFY-------GF 755 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 755 (964)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ......+.+.+|+ ..+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35799999999999999999986 469999999987432 2334557888999 556666899999998 66
Q ss_pred eecCc-----------------eeEEEEEeccCCCHHHHhhhcCCC-----CCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 037111 756 CSHAR-----------------HSFLVYEYLERGSLARILSSETAT-----EMDWSKRVNVIKGVAHALSYMHHECRPPI 813 (964)
Q Consensus 756 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 813 (964)
+.+.+ ..|+||||+ +|+|.+++...... .+++..+..++.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55543 278999999 67999999764321 233578889999999999999999 99
Q ss_pred EeccCCCCCeEECCCCceEEeccCcccccCCCCCCccccccccccccccccccC-----------CCCcchhHHHHHHHH
Q 037111 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM-----------KVTEKCDVYSFGVLA 882 (964)
Q Consensus 814 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~sDvwSlGvll 882 (964)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 9999999999999999999999999986432 3345567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 883 LEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 883 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
|||++|+.||....... ....+.... ...+..+.+++.+||+.||++||++.++++
T Consensus 304 ~elltg~~Pf~~~~~~~-----------~~~~~~~~~----------~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALG-----------GSEWIFRSC----------KNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------C-----------CSGGGGSSC----------CCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCccccccc-----------chhhhhhhc----------cCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999986432211 011111110 112345788899999999999999999985
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=335.74 Aligned_cols=252 Identities=22% Similarity=0.350 Sum_probs=199.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|+.+ +++.||+|++... .......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 357999999999999999999775 5889999998643 2334578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 96 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171 (302)
T ss_dssp ECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred EeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence 9999999999986543 3489999999999999999999999 99999999999999999999999999875432221
Q ss_pred CCcccccccccccccccc-----ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 847 SNWSELAGTYGYVAPELA-----YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~-----~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.......|++.|+|||.+ .+..++.++||||||+++|+|++|+.||.... .......+.....+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~ 240 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----------PMRVLLKIAKSDPP 240 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHHHHHHSCCC
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-----------HHHHHHHHhccCCc
Confidence 122345689999999998 36678999999999999999999999975322 22233333322222
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
... .....+..+.+++.+||+.||++|||+.++++
T Consensus 241 ~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 241 TLL---TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CCS---SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ccC---CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111 11233456788999999999999999999875
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=345.85 Aligned_cols=260 Identities=21% Similarity=0.312 Sum_probs=183.2
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------ce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------RH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 761 (964)
++|+..+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 5799999999999999999965 5788999999876444555667888999999999999999999998654 56
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++|+||+ +++|.+++.. ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 109 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC------
T ss_pred EEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 79999999 6799999864 3589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------------CCCCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------------SLPGAN 907 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------------~~~~~~ 907 (964)
.... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......... ......
T Consensus 182 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 258 (367)
T 2fst_X 182 TADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred cccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 5432 234578999999999887 67899999999999999999999998533211000 000000
Q ss_pred hhHHHHhhhc--cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 MNEAIDHMFD--ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ........ ...+..............+.+++.+||..||++|||++|+++
T Consensus 259 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 259 S-ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp C-HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred h-HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0 00000000 001111011111122356788999999999999999999975
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=334.81 Aligned_cols=254 Identities=25% Similarity=0.391 Sum_probs=197.2
Q ss_pred hcccccceeecCCceeEEEEEeC--CCC--eEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP--SGD--TVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||+||+|++. +++ .||||+++... ......+.+.+|+.++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57999999999999999999753 333 58999886432 23345678999999999999999999999998765 88
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999999997643 3488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||... ...+....+....
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----------~~~~~~~~~~~~~ 241 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-----------NGSQILHKIDKEG 241 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-----------CHHHHHHHHHTSC
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC-----------CHHHHHHHHHccC
Confidence 44332 123457788999999998889999999999999999999 99997532 2233444443332
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+. ....+..+.+++.+||+.||++|||+.++++.|+
T Consensus 242 ~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 242 ERLPR----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC----CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 22211 1234456888999999999999999999999885
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=347.71 Aligned_cols=254 Identities=9% Similarity=0.016 Sum_probs=182.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHH---HHHHhCCCCCceeeEE-------eee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSE---IKALTGVRHRNIVKFY-------GFC 756 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E---~~~l~~l~h~niv~l~-------~~~ 756 (964)
.+|+..+.||+|+||+||+|+.. +|+.||||++..... .......+.+| +..++. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 45899999999999999999764 788999999986443 33445567777 455666 799988755 444
Q ss_pred ecC-----------------ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHH------HHHHHHHHHHHHHHhhCCCCCe
Q 037111 757 SHA-----------------RHSFLVYEYLERGSLARILSSETATEMDWSKR------VNVIKGVAHALSYMHHECRPPI 813 (964)
Q Consensus 757 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~i 813 (964)
... ...|+||||++ |+|.+++...... +++..+ ..++.||++||+|||++ +|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i 215 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFV-YVFRGDEGILALHILTAQLIRLAANLQSK---GL 215 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccc-cchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence 332 34799999999 7999999764322 345555 67889999999999999 99
Q ss_pred EeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCC
Q 037111 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHP 891 (964)
Q Consensus 814 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p 891 (964)
+||||||+||+++.++.+||+|||+++..... .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.|
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999865422 224456799999999987 6799999999999999999999999
Q ss_pred CCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 892 KDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
|..........+..... ..........+ .....+..+.+++.+||+.||++|||+.++++
T Consensus 293 f~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGSWKRPSL----RVPGTDSLAFG----SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTCCCBCCT----TSCCCCSCCCT----TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccchhhhhh----hhccccccchh----hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 97553321111110000 00001111111 11233456888999999999999999999864
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=346.76 Aligned_cols=197 Identities=20% Similarity=0.301 Sum_probs=172.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC------CCCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV------RHRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~ 760 (964)
..+|++.+.||+|+||.||+|... +++.||||++.. .......+.+|+.+++.+ +|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC---ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 357999999999999999999654 688999999864 233345667777776655 6789999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc--eEEeccCc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE--AHVSDFGT 838 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~ 838 (964)
..++||||+. |+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 9999999996 5999999887767799999999999999999999999 9999999999999999987 99999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 249 a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 249 SCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp CEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 9765433 2345789999999999999999999999999999999999999854
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-37 Score=337.63 Aligned_cols=257 Identities=22% Similarity=0.351 Sum_probs=201.0
Q ss_pred HhhcccccceeecCCceeEEEEEe--CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC---CCCceeeEEeeee----
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL--PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV---RHRNIVKFYGFCS---- 757 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 757 (964)
..++|++.+.||+|+||.||+|+. .+++.||+|++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 446899999999999999999987 3678899999875433332233455677766555 8999999999987
Q ss_pred -cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEecc
Q 037111 758 -HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDF 836 (964)
Q Consensus 758 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df 836 (964)
.....++||||++ |+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 5568899999998 5999999876666699999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 837 GTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 837 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
|.++...... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ......+.
T Consensus 165 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----------~~~~~~i~ 232 (326)
T 1blx_A 165 GLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-----------VDQLGKIL 232 (326)
T ss_dssp CSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHH
T ss_pred cccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-----------HHHHHHHH
Confidence 9997654322 23345789999999999999999999999999999999999999864321 11111111
Q ss_pred cc---------------------CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 DA---------------------RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~~---------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. .................+.+++.+||+.||++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 233 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00000011111234456788999999999999999999984
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-37 Score=343.03 Aligned_cols=262 Identities=21% Similarity=0.289 Sum_probs=198.7
Q ss_pred HHHHHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCc---------hhhHHHHHHHHHHHhCCCCCceee
Q 037111 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE---------TTHQKEFLSEIKALTGVRHRNIVK 751 (964)
Q Consensus 681 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~E~~~l~~l~h~niv~ 751 (964)
..++....++|+..+.||+|+||.||+|...+|+.||||++...... ....+.+.+|+.++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 45666777899999999999999999998888999999998643221 222467899999999999999999
Q ss_pred EEeeeec-----CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC
Q 037111 752 FYGFCSH-----ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD 826 (964)
Q Consensus 752 l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~ 826 (964)
+++++.. ....++||||++ |+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 9999843 346899999998 5888888644 34589999999999999999999999 999999999999999
Q ss_pred CCCceEEeccCcccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCC
Q 037111 827 FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905 (964)
Q Consensus 827 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~ 905 (964)
.++.+||+|||++....... ......|++.|+|||.+.+ ..++.++||||+||++|+|++|+.||.....
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-------- 239 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF-------- 239 (362)
T ss_dssp TTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------
T ss_pred CCCCEEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH--------
Confidence 99999999999997544332 2334578999999999876 6789999999999999999999999864221
Q ss_pred CChhHHHHhhhc-----------------------c---CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 906 ANMNEAIDHMFD-----------------------A---RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 906 ~~~~~~~~~~~~-----------------------~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+....+.. . ..+..............+.+++.+||+.||++|||++|+++
T Consensus 240 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 240 ---YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp ---HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 111111110 0 11111111111223456888999999999999999999985
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=330.18 Aligned_cols=254 Identities=21% Similarity=0.328 Sum_probs=206.4
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc-------hhhHHHHHHHHHHHhCCC-CCceeeEEeeee
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE-------TTHQKEFLSEIKALTGVR-HRNIVKFYGFCS 757 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 757 (964)
..++|+..+.||+|+||.||+|..+ +++.||||++...... ....+.+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3568999999999999999999765 6889999998643211 223456889999999995 999999999999
Q ss_pred cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccC
Q 037111 758 HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 758 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
..+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 999999999999999999999764 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccc------cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHH
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAY------TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 911 (964)
.+....... ......|++.|+|||.+. ...++.++||||||+++|||++|+.||... .....
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----------~~~~~ 237 (298)
T 1phk_A 170 FSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR-----------KQMLM 237 (298)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHH
T ss_pred chhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc-----------cHHHH
Confidence 998765433 234557899999999885 456889999999999999999999997532 12233
Q ss_pred HHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.......+. ......+..+.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 238 LRMIMSGNYQFGS--PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHTCCCCCT--TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHhcCCcccCc--ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 3333333322111 112234566888999999999999999999875
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=342.89 Aligned_cols=252 Identities=23% Similarity=0.310 Sum_probs=194.4
Q ss_pred HHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec------
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------ 758 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 758 (964)
...++|+..+.||+|+||+||+|+. .+|+.||||++..... ...+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 4557899999999999999999965 5789999999864322 12369999999999999999999843
Q ss_pred --------------------------------CceeEEEEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHH
Q 037111 759 --------------------------------ARHSFLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSY 804 (964)
Q Consensus 759 --------------------------------~~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~ 804 (964)
....++||||+++ +|.+.+.. .....+++..+..++.||++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3348899999985 88887764 344569999999999999999999
Q ss_pred HhhCCCCCeEeccCCCCCeEEC-CCCceEEeccCcccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHH
Q 037111 805 MHHECRPPIVHRDVSSKNVLLD-FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLA 882 (964)
Q Consensus 805 LH~~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll 882 (964)
||+. +|+||||||+||+++ .++.+||+|||+|+....... .....+|+.|+|||.+.+. .++.++||||+||++
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 9999 999999999999998 688999999999987654432 2345789999999998765 489999999999999
Q ss_pred HHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc-------------------cCCC----CCccccchHHHHHHHHHH
Q 037111 883 LEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD-------------------ARLP----PPWLEVGVEDKLKSIIEV 939 (964)
Q Consensus 883 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~----~~~~~~~~~~~~~~l~~l 939 (964)
|||++|+.||..... .+.+..+.. ...+ ..+........+..+.++
T Consensus 233 ~ell~g~~pf~~~~~-----------~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (383)
T 3eb0_A 233 GELILGKPLFSGETS-----------IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDL 301 (383)
T ss_dssp HHHHHSSCSSCCSSH-----------HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHH
T ss_pred HHHHhCCCCCCCCCh-----------HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHH
Confidence 999999999863221 111111110 0000 111111112234568899
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 037111 940 ALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 940 i~~cl~~dp~~RPs~~evl~ 959 (964)
+.+||..||++|||+.|+++
T Consensus 302 i~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 302 LEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHccCChhhCCCHHHHhc
Confidence 99999999999999999874
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=336.60 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=185.7
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|++.+.||+|+||.||+|... +++.||||++.... ......++.+|+.++++++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3468999999999999999999754 68899999886432 223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhh------cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 766 YEYLERGSLARILSS------ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
|||+++|+|.+++.. .....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999964 1234589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-----Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 840 KLLKPDSS-----NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 840 ~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
........ ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----------~~~~ 237 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM-----------KVLM 237 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG-----------GHHH
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh-----------hHHH
Confidence 76543321 1234568999999999875 56899999999999999999999998643221 1111
Q ss_pred hhhccCCCCCc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+... ...........+.+++.+||+.||++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 238 LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11111111000 00011123356788999999999999999999985
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=340.11 Aligned_cols=254 Identities=22% Similarity=0.355 Sum_probs=200.9
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|+.+. .||+|+++.........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4679999999999999999998753 59999987554444444567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC--
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD-- 845 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 845 (964)
|+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred cccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 999999999996543 4588999999999999999999999 999999999999998 689999999998755322
Q ss_pred ---CCCcccccccccccccccccc---------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 846 ---SSNWSELAGTYGYVAPELAYT---------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 846 ---~~~~~~~~g~~~y~aPE~~~~---------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||... .......
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-----------~~~~~~~ 253 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ-----------PAEAIIW 253 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC-----------CHHHHHH
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC-----------CHHHHHH
Confidence 122234468999999999874 45788999999999999999999998532 2223333
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.+.....+... . ...+..+.+++.+||+.||++|||++++++.|+.
T Consensus 254 ~~~~~~~~~~~-~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 299 (319)
T 2y4i_B 254 QMGTGMKPNLS-Q---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299 (319)
T ss_dssp HHHTTCCCCCC-C---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTT
T ss_pred HhccCCCCCCC-c---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 33222222111 0 1123457889999999999999999999999864
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=330.22 Aligned_cols=250 Identities=26% Similarity=0.434 Sum_probs=193.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--------
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-------- 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 758 (964)
.++|+..+.||+|+||.||+|+.. +++.||||++.. .......+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 467999999999999999999764 789999999864 23445778999999999999999999998854
Q ss_pred -----CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 759 -----ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 759 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
....++||||+++|+|.+++.... ..+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEE
Confidence 457899999999999999997543 3477889999999999999999999 9999999999999999999999
Q ss_pred eccCcccccCCCC--------------CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 037111 834 SDFGTAKLLKPDS--------------SNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSL 898 (964)
Q Consensus 834 ~Dfg~a~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~ 898 (964)
+|||.+....... .......|++.|+|||.+.+. .++.++||||+|+++|||++ ||...
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~--- 231 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG--- 231 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH---
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc---
Confidence 9999998664321 122345689999999998764 68999999999999999998 44211
Q ss_pred cCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 899 SDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+....+.......+ .......+..+.+++.+||+.||++|||++++++
T Consensus 232 -------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 -------MERVNILKKLRSVSIEFP--PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp -------HHHHHHHHHHHSTTCCCC--TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -------hhHHHHHHhccccccccC--ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111122233322221111 1112234455788899999999999999999986
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=349.00 Aligned_cols=256 Identities=18% Similarity=0.298 Sum_probs=203.5
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC-CceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH-RNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+. .+++.||||++...... ..+..|+.+++.++| +++..+..++...+..++||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 5799999999999999999975 57899999987643322 347789999999976 66666777777888999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~~~ 843 (964)
||+ +++|.+++.... ..+++..++.++.||+.||+|||++ +||||||||+|||+ +.++.+||+|||+++...
T Consensus 83 e~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred ECC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999 889999997543 3589999999999999999999999 99999999999999 688999999999998766
Q ss_pred CCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 844 PDSSN-------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 844 ~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ....+....+.
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~--------~~~~~~~~~i~ 229 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA--------GTKKQKYEKIS 229 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC--------SSHHHHHHHHH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc--------hhHHHHHHHHh
Confidence 54322 1256799999999999999999999999999999999999999864322 11222223222
Q ss_pred ccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 917 DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....... .......++.++.+++.+||+.||++||++++|++.|+
T Consensus 230 ~~~~~~~-~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 230 EKKVATS-IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp HHHHHSC-HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred hcccccc-HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 2211111 01111233457889999999999999999999999885
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=330.69 Aligned_cols=251 Identities=21% Similarity=0.327 Sum_probs=198.2
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC--CCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR--HRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|..++++.||||++............+.+|+.++++++ ||||+++++++..+...++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 4579999999999999999999888999999999765555556678999999999997 59999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|| +.+++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||++......
T Consensus 107 ~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC----
T ss_pred Ee-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeeccccccccCc
Confidence 99 55789999997643 588999999999999999999999 999999999999996 489999999999876544
Q ss_pred CC--Ccccccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 846 SS--NWSELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 846 ~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
.. ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||.... ......
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----------~~~~~~ 249 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----------NQISKL 249 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC----------SHHHHH
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH----------HHHHHH
Confidence 32 1234568999999999875 468889999999999999999999985321 111223
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.............. .....+.+++.+||+.||++||+++|+++
T Consensus 250 ~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 250 HAIIDPNHEIEFPD----IPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHHCTTSCCCCCC----CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhcccccCCcc----cchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 33333222211111 11345788889999999999999999985
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=335.16 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=197.1
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC------chhhHHHHHHHHHHHhCCCCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG------ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 759 (964)
..++|++.+.||+|+||.||+|... +++.||||++..... .......+.+|+.++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3468999999999999999999764 678999999864321 122234588999999999999999999999765
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc---eEEecc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE---AHVSDF 836 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~---~kl~Df 836 (964)
. .++||||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred c-eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 5 89999999999999999643 4589999999999999999999999 9999999999999987664 999999
Q ss_pred CcccccCCCCCCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 837 GTAKLLKPDSSNWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 837 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
|+++...... ......|++.|+|||.+. ...++.++|||||||++|+|++|+.||...... . ....
T Consensus 162 g~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~---~~~~ 230 (322)
T 2ycf_A 162 GHSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-------V---SLKD 230 (322)
T ss_dssp TTCEECCCCH-HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-------S---CHHH
T ss_pred ccceeccccc-ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-------H---HHHH
Confidence 9998764321 223456899999999974 566899999999999999999999998632211 1 1111
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+........ ..........+.+++.+||+.||++||++.++++
T Consensus 231 ~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 231 QITSGKYNFI--PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHTCCCCC--HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHhCccccC--chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 2222222211 1111233456889999999999999999999875
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=334.34 Aligned_cols=252 Identities=20% Similarity=0.316 Sum_probs=201.3
Q ss_pred hcccccceeecCCceeEEEEEe--CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCC------ceeeEEeeeecCc
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL--PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR------NIVKFYGFCSHAR 760 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~ 760 (964)
++|++.+.||+|+||.||+|.. .+++.||||+++. .......+.+|+.+++.++|+ +++++++++.+.+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 5799999999999999999975 3678999999864 233456788899888887655 5999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-------------
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF------------- 827 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~------------- 827 (964)
..++||||+ +++|.+++......++++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccc
Confidence 999999999 88999999887766789999999999999999999999 9999999999999988
Q ss_pred ------CCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC
Q 037111 828 ------EYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS 901 (964)
Q Consensus 828 ------~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~ 901 (964)
++.+||+|||.++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-- 241 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE-- 241 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH--
T ss_pred ccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH--
Confidence 668999999999865433 234578999999999999999999999999999999999999986332110
Q ss_pred CCCCCChhHHHHhhhccCCC------------------------------------CCccccchHHHHHHHHHHHHHccC
Q 037111 902 SLPGANMNEAIDHMFDARLP------------------------------------PPWLEVGVEDKLKSIIEVALSCVD 945 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~l~~li~~cl~ 945 (964)
....+..... ..+ .............++.+++.+||+
T Consensus 242 ------~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 314 (339)
T 1z57_A 242 ------HLAMMERILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE 314 (339)
T ss_dssp ------HHHHHHHHHC-SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred ------HHHHHHHHhC-CCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhC
Confidence 0001111100 000 000011123456778999999999
Q ss_pred CCCCCCCCHHHHHH
Q 037111 946 ANPERRPNMQIVCK 959 (964)
Q Consensus 946 ~dp~~RPs~~evl~ 959 (964)
.||++|||++|+++
T Consensus 315 ~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 315 YDPAKRITLREALK 328 (339)
T ss_dssp SSTTTSCCHHHHTT
T ss_pred cCcccccCHHHHhc
Confidence 99999999999974
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=334.07 Aligned_cols=257 Identities=19% Similarity=0.288 Sum_probs=197.5
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeec--CceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSH--ARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~l 764 (964)
++|++.+.||+|+||+||+|+. .+++.||||++.. ...+.+.+|+.++++++ ||||+++++++.+ ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 5799999999999999999965 5789999999863 22467889999999997 9999999999988 668899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccCcccccC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLK 843 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~ 843 (964)
||||+++++|.+++.. +++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++...
T Consensus 111 v~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999999999842 78899999999999999999999 999999999999999777 89999999998765
Q ss_pred CCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC---CCChhHHH-------
Q 037111 844 PDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP---GANMNEAI------- 912 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~---~~~~~~~~------- 912 (964)
.... .....|++.|+|||.+.+ ..++.++||||+||++|||++|+.||............ ........
T Consensus 183 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 183 PGQE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp TTCC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred CCCc-cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 4432 345578999999999887 66899999999999999999999998432210000000 00000000
Q ss_pred -------HhhhccCCCCCc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 -------DHMFDARLPPPW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 -------~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...........+ ..........++.+++.+||++||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000000 00011123466889999999999999999999986
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=344.22 Aligned_cols=257 Identities=20% Similarity=0.333 Sum_probs=201.2
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC--------CCceeeEEeeee--
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR--------HRNIVKFYGFCS-- 757 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~-- 757 (964)
++|++.+.||+|+||+||+|+. .+++.||||++.. .......+.+|+.++++++ ||||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 6799999999999999999965 4688999999863 2334567889999998885 888999999997
Q ss_pred --cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC------
Q 037111 758 --HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY------ 829 (964)
Q Consensus 758 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~------ 829 (964)
.....++||||+ +|++.+++.......+++..++.++.||+.||+|||+++ +|+||||||+||+++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 566899999999 567877776665567999999999999999999999853 799999999999999775
Q ss_pred -------------------------------------------ceEEeccCcccccCCCCCCcccccccccccccccccc
Q 037111 830 -------------------------------------------EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT 866 (964)
Q Consensus 830 -------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~ 866 (964)
.+||+|||.++..... .....||+.|+|||++.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHHT
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhhcC
Confidence 7999999999876533 234578999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc--cCCCC----------------------
Q 037111 867 MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--ARLPP---------------------- 922 (964)
Q Consensus 867 ~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---------------------- 922 (964)
..++.++|||||||++|||++|+.||........ .........+.. +..+.
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEY-----TRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHI 342 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSS-----CHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCccccc-----CchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccc
Confidence 9999999999999999999999999964332110 000011111100 00000
Q ss_pred ----Cc--------cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 ----PW--------LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ----~~--------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
++ ...........+.+++.+||+.||++|||++|+++
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 343 TKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 00113456678899999999999999999999985
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=339.54 Aligned_cols=249 Identities=21% Similarity=0.334 Sum_probs=196.5
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee-----
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS----- 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 762 (964)
++|...+.||+|+||.||+|... +|+.||||++............+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 47899999999999999999754 688999999976555555567889999999999999999999999877654
Q ss_pred -EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 763 -FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 763 -~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
++||||+. |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 58988873 2389999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc---
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--- 917 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 917 (964)
.... .....||+.|+|||.+.+ ..++.++||||+||++|+|++|+.||..... .+....+..
T Consensus 194 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~i~~~~~ 259 (371)
T 4exu_A 194 ADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----------LDQLTQILKVTG 259 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHHHC
T ss_pred cccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHHHHhC
Confidence 5433 234578999999999887 6789999999999999999999999864321 111111110
Q ss_pred --------------------c--CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 --------------------A--RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 --------------------~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ..+..............+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 260 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 00000001111223466889999999999999999999975
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=341.39 Aligned_cols=261 Identities=24% Similarity=0.313 Sum_probs=191.7
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------ee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------HS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~ 762 (964)
.+|+..+.||+|+||+||+|+...+..||+|++..... ...+|+.+++.++||||+++++++...+ ..
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 46999999999999999999987777899999864322 1236999999999999999999995433 37
Q ss_pred EEEEEeccCCCHHHHhh-hcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC-CCCceEEeccCccc
Q 037111 763 FLVYEYLERGSLARILS-SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-FEYEAHVSDFGTAK 840 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~a~ 840 (964)
++||||++++.+..... ......+++..+..++.||++||+|||++ +|+||||||+||+++ .++.+||+|||+|+
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 89999998744333322 12345689999999999999999999999 999999999999999 79999999999998
Q ss_pred ccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHHhh
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAIDHM 915 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~~ 915 (964)
....... .....+|+.|+|||.+.+. .++.++||||+||++|||++|+.||.......... ..+....+.+..+
T Consensus 191 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 191 ILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp ECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 7654432 2345789999999998765 58999999999999999999999986432110000 0000000000000
Q ss_pred ----hccCCC----CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 ----FDARLP----PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 ----~~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....++ .++..........++.+++.+||..||++|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 001111 11111111223456889999999999999999999975
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=362.12 Aligned_cols=253 Identities=23% Similarity=0.376 Sum_probs=202.8
Q ss_pred hhcccccceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|+..+.||+|+||.||+|.+.. +..||||+++.. ......+.+.+|+.++++++||||+++++++. ++..+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 4678999999999999999997642 456999988643 23444578999999999999999999999985 45689
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 467 lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999997543 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 844 PDSS-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 844 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||... ...+....+......
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~-----------~~~~~~~~i~~~~~~ 611 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV-----------KNNDVIGRIENGERL 611 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----------CHHHHHHHHHHTCCC
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC-----------CHHHHHHHHHcCCCC
Confidence 4432 2233456789999999998999999999999999999997 88997532 223333443333222
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+. ...++..+.+++.+||+.||++||++.++++.|+
T Consensus 612 ~~-----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 612 PM-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11 1233456888999999999999999999999885
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=346.32 Aligned_cols=199 Identities=22% Similarity=0.388 Sum_probs=155.0
Q ss_pred hcccc-cceeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee--cCcee
Q 037111 689 NNFDE-SFCIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS--HARHS 762 (964)
Q Consensus 689 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 762 (964)
+.|++ .++||+|+||+||+|+.+ +++.||||++..... ...+.+|+.++++++||||+++++++. .....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 44666 558999999999999865 578999999864322 246789999999999999999999995 46789
Q ss_pred EEEEEeccCCCHHHHhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE----CCCCce
Q 037111 763 FLVYEYLERGSLARILSSE-------TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL----DFEYEA 831 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill----~~~~~~ 831 (964)
++||||+.+ +|.+++... ....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcE
Confidence 999999975 888888532 222489999999999999999999999 99999999999999 677899
Q ss_pred EEeccCcccccCCCC---CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 037111 832 HVSDFGTAKLLKPDS---SNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLL 895 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~ 895 (964)
||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 999999998765432 223456789999999999874 4899999999999999999999999643
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=334.18 Aligned_cols=249 Identities=23% Similarity=0.338 Sum_probs=183.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeee--------c
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCS--------H 758 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~ 758 (964)
.+|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+++++. ||||+++++++. .
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 47999999999999999999764 7899999998542 3445567899999999996 999999999983 3
Q ss_pred CceeEEEEEeccCCCHHHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEECCCCceEEec
Q 037111 759 ARHSFLVYEYLERGSLARILSS-ETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLDFEYEAHVSD 835 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~~~~~~kl~D 835 (964)
....++||||+. |+|.+++.. .....+++..++.++.||+.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 456899999996 699999865 2344599999999999999999999998 7 99999999999999999999999
Q ss_pred cCcccccCCCCCC------------cccccccccccccccc---ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC
Q 037111 836 FGTAKLLKPDSSN------------WSELAGTYGYVAPELA---YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD 900 (964)
Q Consensus 836 fg~a~~~~~~~~~------------~~~~~g~~~y~aPE~~---~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~ 900 (964)
||+++........ .....|++.|+|||.+ .+..++.++||||||+++|||++|+.||......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-- 259 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-- 259 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--
Confidence 9999876543221 1134589999999998 5667899999999999999999999998532211
Q ss_pred CCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 901 SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...........+. .....+.+++.+||+.||++||+++|+++.|+
T Consensus 260 ---------~~~~~~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 260 ---------RIVNGKYSIPPHD--------TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp ---------------CCCCTTC--------CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ---------HhhcCcccCCccc--------ccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111111111 11223678889999999999999999999885
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=337.67 Aligned_cols=253 Identities=23% Similarity=0.368 Sum_probs=199.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----ce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 761 (964)
.++|+..+.||+|+||.||+|... +++.||||++... ........+.+|+.++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 357999999999999999999754 6888999998743 2344457789999999999999999999999664 46
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+.+ +|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~iv~e~~~~-~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 105 VYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp EEEEEECCSE-EHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEcccCc-CHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 8999999975 999998653 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC---Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 842 LKPDSS---NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 842 ~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
...... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||...... +....+..
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----------~~~~~i~~ 246 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-----------DQLNHILG 246 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-----------GHHHHHHH
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-----------HHHHHHHH
Confidence 654322 1234579999999998754 45899999999999999999999998643221 11111100
Q ss_pred ----------------------cCCCC---CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ----------------------ARLPP---PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ----------------------~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+. ............++.+++.+||..||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 0000111223456889999999999999999999975
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=356.03 Aligned_cols=353 Identities=18% Similarity=0.171 Sum_probs=237.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCce----eeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCC
Q 037111 25 NHNNSLLPSWTLDPVNATNITTPCT----WSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNI 100 (964)
Q Consensus 25 ~~~~~~l~sW~~~~~~~~~~~~~C~----w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~ 100 (964)
++....+++|.++ .+||. |.++.|+. .++....+....+ +.-.+++++.|++++|.+++..
T Consensus 3 g~~~~~l~~~~~~-------~~C~~~~~~~~c~~~~~-----~i~~~~~~~~~~~---~~l~l~~l~~l~l~~~~l~~lp 67 (597)
T 3oja_B 3 GQQRYNVKPRQPE-------YKCIDSNLQYDCVFYDV-----HIDMQTQDVYFGF---EDITLNNQKIVTFKNSTMRKLP 67 (597)
T ss_dssp --------CCCSE-------ECCCCC--CCSEEECSC-----EECSSCCCCEESC---SSGGGCCCSEEEESSCEESEEC
T ss_pred CcccccccCCCCC-------CcCcccCcCceeEecCc-----eecccccccccCc---ccccCCCceEEEeeCCCCCCcC
Confidence 3455678889753 44553 66665541 2222222222111 1223678899999999998665
Q ss_pred CccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCC
Q 037111 101 PSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLS 179 (964)
Q Consensus 101 p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 179 (964)
+..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+|. ++.+++|++|+|++|.+++..+..|++++
T Consensus 68 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~ 147 (597)
T 3oja_B 68 AALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP 147 (597)
T ss_dssp THHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCC
Confidence 56678899999999999999987777888999999999998888888775 68888888888888888866566678888
Q ss_pred CCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecc
Q 037111 180 SLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLS 259 (964)
Q Consensus 180 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 259 (964)
+|++|+|++|.+++..|..|+++++|++|+|++|.+++.. ++.+++|+.|++++|.+++ +...++|+.|+++
T Consensus 148 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls 219 (597)
T 3oja_B 148 KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDAS 219 (597)
T ss_dssp TCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECC
T ss_pred CCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeecc
Confidence 8888888888888877878888888888888888888652 4556778888888887764 2344567777777
Q ss_pred ccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccc
Q 037111 260 QNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSL 339 (964)
Q Consensus 260 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~ 339 (964)
+|.++...+ .+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..
T Consensus 220 ~n~l~~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~--------------------- 273 (597)
T 3oja_B 220 HNSINVVRG-PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHP--------------------- 273 (597)
T ss_dssp SSCCCEEEC-SC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGG---------------------
T ss_pred CCccccccc-cc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHH---------------------
Confidence 777764332 22 2567777777777764 355666666666666666666555544
Q ss_pred cccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccc
Q 037111 340 PKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNAT 419 (964)
Q Consensus 340 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~ 419 (964)
|..+++|+.|+|++|.++++ +..+..+++|+.|+|++|+++. .+..+..+++|+.|+|++|.+++. .+..++
T Consensus 274 ---~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~ 345 (597)
T 3oja_B 274 ---FVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL---KLSTHH 345 (597)
T ss_dssp ---GTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC---CCCTTC
T ss_pred ---hcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCc---ChhhcC
Confidence 44555555555555555543 2233445666666666666653 334455666677777777776644 256678
Q ss_pred cCcEEeccCCccccc
Q 037111 420 QLHELDFSSNHLVGK 434 (964)
Q Consensus 420 ~L~~L~Ls~N~l~~~ 434 (964)
+|+.|+|++|.+.+.
T Consensus 346 ~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 346 TLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCSEEECCSSCEEHH
T ss_pred CCCEEEeeCCCCCCh
Confidence 899999999998753
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-36 Score=340.96 Aligned_cols=260 Identities=26% Similarity=0.354 Sum_probs=191.6
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------ce
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------RH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 761 (964)
.+|+..+.||+|+||.||+|+.. +|+.||||++.... ....+|+++++.++||||+++++++... ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 36899999999999999999775 68999999986432 1233699999999999999999998532 24
Q ss_pred eEEEEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccCc
Q 037111 762 SFLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGT 838 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~ 838 (964)
.++||||+++ ++.+.+.. .....+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999986 77766643 3345689999999999999999999999 99999999999999965 5689999999
Q ss_pred ccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHH
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAID 913 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~ 913 (964)
++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.......... ..+....+.+.
T Consensus 204 a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 204 AKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred hhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 987654332 2345789999999998764 79999999999999999999999986322100000 00000000011
Q ss_pred hhh----ccCCC----CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMF----DARLP----PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~----~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+. ...++ .+|..........++.+++.+||..||++||++.|+++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 100 00111 01111111223456889999999999999999999874
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=334.80 Aligned_cols=264 Identities=23% Similarity=0.338 Sum_probs=199.1
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----ce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 761 (964)
.++|+..+.||+|+||.||+|+.. +|+.||||++... ........+.+|+.++++++||||+++++++... ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 357999999999999999999765 6889999998643 3344456788999999999999999999998664 67
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+. |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 899999997 5999998653 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC----------cccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-----------
Q 037111 842 LKPDSSN----------WSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS----------- 899 (964)
Q Consensus 842 ~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~----------- 899 (964)
....... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (353)
T 2b9h_A 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT 241 (353)
T ss_dssp CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence 6533211 223468999999998764 678999999999999999999999986432100
Q ss_pred ---CCCCCCCChhHHHHhhhc-cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 900 ---DSSLPGANMNEAIDHMFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 900 ---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.............+.... ...+.............++.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000000000000 001111111111234456789999999999999999999986
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=334.70 Aligned_cols=258 Identities=21% Similarity=0.318 Sum_probs=196.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce------
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH------ 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 761 (964)
++|...+.||+|+||.||+|..+ +|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 46899999999999999999764 68899999997654455556788999999999999999999999987654
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+. |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588888732 389999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccC----------------CCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD----------------SSLP 904 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~----------------~~~~ 904 (964)
.... .....+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||........ ....
T Consensus 176 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 252 (353)
T 3coi_A 176 ADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred CCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence 5432 234578999999999877 6789999999999999999999999864321100 0000
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........... .. .+..............+.+++.+||+.||++|||++++++
T Consensus 253 ~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 253 DKAAKSYIQSL-PQ-TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CHHHHHHHHTS-CB-CSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hHHHHHHHHhC-cC-CCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000000 00 0000011112234566888999999999999999999975
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=329.72 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=191.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee----------
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS---------- 757 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~---------- 757 (964)
++|+..+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 57999999999999999999775 5889999998642 3445678899999999999999999999874
Q ss_pred ----cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC-CCCceE
Q 037111 758 ----HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-FEYEAH 832 (964)
Q Consensus 758 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-~~~~~k 832 (964)
+....++||||++ |+|.+++.. .++++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+|
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEE
Confidence 3467899999998 599999954 3488999999999999999999999 999999999999997 567999
Q ss_pred EeccCcccccCCCC---CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCCh
Q 037111 833 VSDFGTAKLLKPDS---SNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 833 l~Dfg~a~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~ 908 (964)
|+|||.++...... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||.....
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----------- 230 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE----------- 230 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH-----------
Confidence 99999998765332 12234567899999998865 6789999999999999999999999864322
Q ss_pred hHHHHhhhcc------------------------CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 909 NEAIDHMFDA------------------------RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 909 ~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+....+... ..+.............++.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 231 LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1111111110 00000001111223466889999999999999999999975
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=333.51 Aligned_cols=250 Identities=20% Similarity=0.275 Sum_probs=173.3
Q ss_pred hhcccccc-eeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec----Cce
Q 037111 688 INNFDESF-CIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH----ARH 761 (964)
Q Consensus 688 ~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~ 761 (964)
.++|++.+ .||+|+||.||+|..+ +++.||||++... ..... +....++.++||||+++++++.. +..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 46788854 6999999999999765 7899999998642 11111 22233566789999999999976 456
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccCc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFGT 838 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~ 838 (964)
.++||||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 89999999999999999877666799999999999999999999999 9999999999999986 45599999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
++...... .....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||......... ......+...
T Consensus 178 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------~~~~~~~~~~ 248 (336)
T 3fhr_A 178 AKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS-------PGMKRRIRLG 248 (336)
T ss_dssp CEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred ceeccccc--cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh-------hhHHHhhhcc
Confidence 98655332 23457899999999998888999999999999999999999998643321100 0001111111
Q ss_pred --CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 --RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 --~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+.+ ........+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 QYGFPNP----EWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --CCCTT----TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccCch----hhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111 11233456788999999999999999999986
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=335.09 Aligned_cols=200 Identities=22% Similarity=0.298 Sum_probs=171.3
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CC-----ceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HR-----NIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~ 759 (964)
..++|++.+.||+|+||+||+|..+ +++.||||+++. ......++..|+.+++.++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 3578999999999999999999765 678899999864 2233456777888877764 44 599999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC--CCCceEEeccC
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD--FEYEAHVSDFG 837 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg 837 (964)
+..++||||+. |+|.+++.......+++..+..++.|++.||+|||++ +.+|+||||||+||+++ .++.+||+|||
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 99999999996 5999999877666799999999999999999999953 23899999999999995 47789999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 207 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 207 SSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp TCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Cceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99876533 2345789999999999999999999999999999999999999864
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=336.78 Aligned_cols=335 Identities=21% Similarity=0.218 Sum_probs=252.5
Q ss_pred CccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEE
Q 037111 225 YLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSL 304 (964)
Q Consensus 225 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 304 (964)
.+++++.|++++|.++...+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|+.+++|+.|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35788889999998886655667888889999999998887777788888889999999888887777888888888888
Q ss_pred EeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeec
Q 037111 305 SVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFY 384 (964)
Q Consensus 305 ~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 384 (964)
++++|+++...+..+..+++|++|++++|.+.+..|..+.++++|+.|++++|++++.. +..+++|+.|++++|.+
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l- 198 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLL- 198 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCC-
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccc-
Confidence 88888888655554555666666666666665555555555555665555555555432 33344455555555444
Q ss_pred cccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhh
Q 037111 385 GELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELG 464 (964)
Q Consensus 385 ~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 464 (964)
++ +...++|++|++++|.+... |.. ..++|+.|+|++|.+++. ..+.
T Consensus 199 -----------------------~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~ 245 (390)
T 3o6n_A 199 -----------------------ST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLL 245 (390)
T ss_dssp -----------------------SE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGG
T ss_pred -----------------------cc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHc
Confidence 32 12234678888888888744 332 247888889999888754 5788
Q ss_pred ccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhccccccccee
Q 037111 465 LLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKL 544 (964)
Q Consensus 465 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 544 (964)
.+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L 323 (390)
T 3o6n_A 246 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 323 (390)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred CCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEE
Confidence 88999999999999988888889999999999999999975 5666778899999999999998 677788899999999
Q ss_pred eccCCcCCCcccccccccccceEEEecCCcccccCCCCccCCCCCcccccCCCCccCC
Q 037111 545 NLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGE 602 (964)
Q Consensus 545 ~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 602 (964)
+|++|+|+.. + +..+++|+.|++++|++++.... ..++......+.+++..|+.
T Consensus 324 ~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 324 YLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp ECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCT
T ss_pred ECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecc
Confidence 9999999855 3 77789999999999999985322 23555666667788888865
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=355.25 Aligned_cols=335 Identities=21% Similarity=0.213 Sum_probs=233.2
Q ss_pred ccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEE
Q 037111 226 LRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLS 305 (964)
Q Consensus 226 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 305 (964)
+.+++.|++++|.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|+.|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34566666666666655555566666666666666666655555666666666666666666666566666666666666
Q ss_pred eeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeecc
Q 037111 306 VGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYG 385 (964)
Q Consensus 306 l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~ 385 (964)
|++|.+++..+..|..+++|++|++++|.+.+..|..+.++++|+.|++++|.+++.. +..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 6666666554444455555555555555555555555566666666666666655542 3334555555555555432
Q ss_pred ccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhc
Q 037111 386 ELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL 465 (964)
Q Consensus 386 ~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 465 (964)
. ...++|+.|++++|.+....+ .+ .++|+.|+|++|.+++ +..+..
T Consensus 207 l-----------------------------~~~~~L~~L~ls~n~l~~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 207 L-----------------------------AIPIAVEELDASHNSINVVRG-PV--NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp E-----------------------------ECCTTCSEEECCSSCCCEEEC-SC--CSCCCEEECCSSCCCC--CGGGGG
T ss_pred c-----------------------------cCCchhheeeccCCccccccc-cc--CCCCCEEECCCCCCCC--Chhhcc
Confidence 1 223457777777777764332 22 2578888888888875 367888
Q ss_pred cCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceee
Q 037111 466 LTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLN 545 (964)
Q Consensus 466 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 545 (964)
+++|+.|+|++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 8888888888888888888888888999999999999875 5666778899999999999998 6788888999999999
Q ss_pred ccCCcCCCcccccccccccceEEEecCCcccccCCCCccCCCCCcccccCCCCccCCC
Q 037111 546 LSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEV 603 (964)
Q Consensus 546 Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 603 (964)
|++|+|++.. +..+++|+.|++++|+|+|.... ..++.+....+.+++..|+.+
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999998653 66788999999999999986432 346667777788999999864
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-36 Score=330.41 Aligned_cols=255 Identities=24% Similarity=0.358 Sum_probs=178.7
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHH-HHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIK-ALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||+|..+ +|+.||||++..... ......+..|+. +++.++||||+++++++.+.+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 57999999999999999999764 788999999975432 333445556665 678889999999999999999999999
Q ss_pred EeccCCCHHHHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSS---ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
||+++ +|.+++.. .....+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99986 88887753 23456899999999999999999999842 79999999999999999999999999998765
Q ss_pred CCCCCcccccccccccccccc----ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSNWSELAGTYGYVAPELA----YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
.... .....|++.|+|||.+ .+..++.++||||||+++|||++|+.||....... +....+....
T Consensus 178 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----------~~~~~~~~~~ 246 (327)
T 3aln_A 178 DSIA-KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----------DQLTQVVKGD 246 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------CCCCCSC
T ss_pred cccc-cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----------HHHHHHhcCC
Confidence 4322 2334689999999998 46678999999999999999999999986432210 1111111111
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+ .............+.+++.+||+.||++||+++++++
T Consensus 247 ~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 247 PP-QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CC-CCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC-CCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11 1001111223456888999999999999999999875
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=333.40 Aligned_cols=310 Identities=20% Similarity=0.200 Sum_probs=213.8
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNL 160 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L 160 (964)
.++++++|++++|.++...+..+..+++|++|+|++|.+++..|..++.+++|++|+|++|.+++.+|. ++.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 367888999999888754444578889999999999988876677888888888888888888887765 6788888888
Q ss_pred EcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 161 ALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 161 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
+|++|+++...+..|+++++|++|++++|++++..|..++++++|++|++++|++++. .++.+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 8888888854444567888888888888888877777778888888888888887754 2455677777777777766
Q ss_pred CCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccc
Q 037111 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320 (964)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 320 (964)
+ +...++|+.|++++|.++.. |... .++|+.|++++|++++. ..+..+++|+.|++++|.+++..|.
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~--- 266 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYH--- 266 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESG---
T ss_pred c-----cCCCCcceEEECCCCeeeec-cccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChh---
Confidence 3 22345677777777777643 3222 35667777777766642 4566666666666666666655444
Q ss_pred cCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceE
Q 037111 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGIL 400 (964)
Q Consensus 321 ~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L 400 (964)
.+..+++|+.|+|++|++++.. ..+..+++|+.|+|++|++... +..+..+++|+.|
T Consensus 267 ---------------------~~~~l~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L 323 (390)
T 3o6n_A 267 ---------------------PFVKMQRLERLYISNNRLVALN-LYGQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLENL 323 (390)
T ss_dssp ---------------------GGTTCSSCCEEECCSSCCCEEE-CSSSCCTTCCEEECCSSCCCCC-GGGHHHHTTCSEE
T ss_pred ---------------------HccccccCCEEECCCCcCcccC-cccCCCCCCCEEECCCCcceec-CccccccCcCCEE
Confidence 4455555555555555555432 2334556666666666666532 3334556677777
Q ss_pred eecccccCCCCCCCCcccccCcEEeccCCcccc
Q 037111 401 KIAGNNITGGIPPEIGNATQLHELDFSSNHLVG 433 (964)
Q Consensus 401 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 433 (964)
++++|.|+.. .+..+++|++|++++|++..
T Consensus 324 ~L~~N~i~~~---~~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 324 YLDHNSIVTL---KLSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp ECCSSCCCCC---CCCTTCCCSEEECCSSCEEH
T ss_pred ECCCCcccee---CchhhccCCEEEcCCCCccc
Confidence 7777776644 25677889999999998874
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=325.10 Aligned_cols=253 Identities=21% Similarity=0.322 Sum_probs=183.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||||++..........+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 568999999999999999999775 7899999999764444444445555666788899999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
||+ ++.+..+... ....+++..+..++.|+++||+|||+ + +|+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 4455555543 23458999999999999999999998 6 8999999999999999999999999999765543
Q ss_pred CCCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 846 SSNWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.. .....|++.|+|||.+. ...++.++||||||+++|||++|+.||.... ...+....+.....
T Consensus 179 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----------~~~~~~~~~~~~~~ 247 (318)
T 2dyl_A 179 KA-KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK----------TDFEVLTKVLQEEP 247 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC----------SHHHHHHHHHHSCC
T ss_pred cc-ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC----------ccHHHHHHHhccCC
Confidence 22 23456899999999984 5568899999999999999999999985321 12233333333322
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+... ........+.+++.+||+.||++||+++++++
T Consensus 248 ~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 PLLP---GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCCC---SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCC---ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 2110 01123355788899999999999999999875
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=340.75 Aligned_cols=249 Identities=24% Similarity=0.357 Sum_probs=186.2
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
.|...+.||+|+||+||.+...+|+.||||++... ....+.+|+.+++++ +||||+++++++.+++..++||||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 35556889999999998776668999999998632 234677899999875 899999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCC-----CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-------------Cc
Q 037111 769 LERGSLARILSSETATEM-----DWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-------------YE 830 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l-----~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-------------~~ 830 (964)
+. |+|.+++........ ++..+..++.||+.||+|||++ +|+||||||+||+++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 96 599999976433211 2234578999999999999999 99999999999999754 48
Q ss_pred eEEeccCcccccCCCCCC----cccccccccccccccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCCCccccc
Q 037111 831 AHVSDFGTAKLLKPDSSN----WSELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSL 898 (964)
Q Consensus 831 ~kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~ 898 (964)
+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.....
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~- 245 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS- 245 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT-
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh-
Confidence 999999999877654322 234579999999999875 668999999999999999999 8999853211
Q ss_pred cCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 899 SDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
............ +............++.+++.+||+.||++|||+.+|++
T Consensus 246 --------~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 246 --------RESNIIRGIFSL---DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --------HHHHHHHTCCCC---CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --------hHHHHhcCCCCc---ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 011111111111 11111123456678899999999999999999999975
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=333.45 Aligned_cols=259 Identities=21% Similarity=0.262 Sum_probs=187.7
Q ss_pred HHHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 682 EEIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 682 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
.+.....++|++.+.||+|+||.||+|+.. +|+.||||++..... ....+.+|+..++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 455677889999999999999999999764 689999999864322 2234567788888889999999999996543
Q ss_pred e-------eEEEEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHh--hCCCCCeEeccCCCCCeEECC-C
Q 037111 761 H-------SFLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMH--HECRPPIVHRDVSSKNVLLDF-E 828 (964)
Q Consensus 761 ~-------~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~iiH~dlkp~Nill~~-~ 828 (964)
. .++||||+++ +|.+.+.. .....+++..+..++.|++.|++||| +. +|+||||||+||+++. +
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 3 7899999986 55554432 34455889999999999999999999 77 9999999999999997 8
Q ss_pred CceEEeccCcccccCCCCCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCC
Q 037111 829 YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGAN 907 (964)
Q Consensus 829 ~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~ 907 (964)
+.+||+|||+++....... .....||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~---------- 237 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS---------- 237 (360)
T ss_dssp TEEEECCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----------
T ss_pred CcEEEeeCCCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh----------
Confidence 9999999999987654432 23457899999999987654 89999999999999999999999864221
Q ss_pred hhHHHHhhhccCCC-----------------------CCcc---ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 MNEAIDHMFDARLP-----------------------PPWL---EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 ~~~~~~~~~~~~~~-----------------------~~~~---~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+...... .++. ..........+.+++.+||+.||++|||+.|+++
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 238 -AGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp -HHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -HHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1111111110000 0000 0001113567889999999999999999999875
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=329.45 Aligned_cols=252 Identities=17% Similarity=0.292 Sum_probs=199.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CC-CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc------eeeEEeeeecCc
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SG-DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN------IVKFYGFCSHAR 760 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~ 760 (964)
++|++.+.||+|+||+||+|... ++ +.||+|+++. .......+.+|+.++++++|++ ++.+++++...+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 57999999999999999999764 44 6899999864 2334567788999988887655 999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---------------
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL--------------- 825 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill--------------- 825 (964)
..++||||+ ++++.+++.......+++..+..++.||+.||+|||++ +|+||||||+||++
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence 999999999 66888888776666799999999999999999999999 99999999999999
Q ss_pred ----CCCCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC
Q 037111 826 ----DFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS 901 (964)
Q Consensus 826 ----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~ 901 (964)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-- 246 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-- 246 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--
T ss_pred cccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--
Confidence 56789999999999865433 234578999999999999999999999999999999999999986432210
Q ss_pred CCCCCChhHHHHhhhccCCC------------------------------------CCccccchHHHHHHHHHHHHHccC
Q 037111 902 SLPGANMNEAIDHMFDARLP------------------------------------PPWLEVGVEDKLKSIIEVALSCVD 945 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~l~~li~~cl~ 945 (964)
....+..... ..+ ..............+.+++.+||+
T Consensus 247 ------~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 319 (355)
T 2eu9_A 247 ------HLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE 319 (355)
T ss_dssp ------HHHHHHHHHC-CCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred ------HHHHHHHHcC-CCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhc
Confidence 0000111100 000 000001122345678899999999
Q ss_pred CCCCCCCCHHHHHH
Q 037111 946 ANPERRPNMQIVCK 959 (964)
Q Consensus 946 ~dp~~RPs~~evl~ 959 (964)
.||++|||++|+++
T Consensus 320 ~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 320 FDPAQRITLAEALL 333 (355)
T ss_dssp SSTTTSCCHHHHTT
T ss_pred CChhhCcCHHHHhc
Confidence 99999999999974
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=333.98 Aligned_cols=257 Identities=21% Similarity=0.329 Sum_probs=199.0
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-----------CCceeeEEeee
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-----------HRNIVKFYGFC 756 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~ 756 (964)
++|++.+.||+|+||+||+|+. .+++.||||++.. .......+.+|+.++++++ ||||+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 5799999999999999999975 5788999999863 2334567788999888775 89999999999
Q ss_pred ecCc----eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC------
Q 037111 757 SHAR----HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD------ 826 (964)
Q Consensus 757 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~------ 826 (964)
...+ ..++||||+ +++|.+++.......+++..+..++.||+.||+|||+++ +|+||||||+||+++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTT
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCc
Confidence 8654 789999999 889999998766667999999999999999999999843 899999999999994
Q ss_pred CCCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCC
Q 037111 827 FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGA 906 (964)
Q Consensus 827 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~ 906 (964)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----~ 244 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY-----T 244 (373)
T ss_dssp TEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred CcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc-----C
Confidence 4458999999999876533 2345789999999999999999999999999999999999999874332110 0
Q ss_pred ChhHHHHhhhc--cCCCCC--------------------------c--------cccchHHHHHHHHHHHHHccCCCCCC
Q 037111 907 NMNEAIDHMFD--ARLPPP--------------------------W--------LEVGVEDKLKSIIEVALSCVDANPER 950 (964)
Q Consensus 907 ~~~~~~~~~~~--~~~~~~--------------------------~--------~~~~~~~~~~~l~~li~~cl~~dp~~ 950 (964)
.....+..+.. +..+.. + ...........+.+++.+||+.||++
T Consensus 245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 324 (373)
T 1q8y_A 245 KDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK 324 (373)
T ss_dssp CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTT
T ss_pred ChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccc
Confidence 01111111110 000000 0 00112456778999999999999999
Q ss_pred CCCHHHHHH
Q 037111 951 RPNMQIVCK 959 (964)
Q Consensus 951 RPs~~evl~ 959 (964)
|||++|+++
T Consensus 325 Rpt~~ell~ 333 (373)
T 1q8y_A 325 RADAGGLVN 333 (373)
T ss_dssp CBCHHHHHT
T ss_pred cCCHHHHhh
Confidence 999999986
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=331.39 Aligned_cols=242 Identities=21% Similarity=0.325 Sum_probs=197.2
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCch----hhHHHHHHHHHHHhCCC--CCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGET----THQKEFLSEIKALTGVR--HRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~ 760 (964)
.++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+|+.++++++ ||||+++++++.+.+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 46799999999999999999965 478899999987543221 12245667999998886 699999999999999
Q ss_pred eeEEEEEeccC-CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC-CCCceEEeccCc
Q 037111 761 HSFLVYEYLER-GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-FEYEAHVSDFGT 838 (964)
Q Consensus 761 ~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~ 838 (964)
..++|||++.+ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred cEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 99999999986 89999997643 488999999999999999999999 999999999999999 789999999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
++..... ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.... +.. .
T Consensus 197 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------------~~~----~ 257 (320)
T 3a99_A 197 GALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------------EII----R 257 (320)
T ss_dssp CEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------HHH----H
T ss_pred ccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------------hhh----c
Confidence 9876543 2334578999999999887766 678999999999999999999985321 111 1
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+ .....++.+++.+||+.||++|||++++++
T Consensus 258 ~~~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 258 GQVFFR------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCCCCS------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccccc------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111 112345788899999999999999999986
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-36 Score=327.30 Aligned_cols=245 Identities=21% Similarity=0.335 Sum_probs=190.0
Q ss_pred HHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCch----hhHHHHHHHHHHHhCC----CCCceeeEEee
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGET----THQKEFLSEIKALTGV----RHRNIVKFYGF 755 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l----~h~niv~l~~~ 755 (964)
....++|++.+.||+|+||.||+|+. .+++.||||++....... .....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999999999999976 468899999986432211 1223455788888877 89999999999
Q ss_pred eecCceeEEEEEe-ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC-CCCceEE
Q 037111 756 CSHARHSFLVYEY-LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-FEYEAHV 833 (964)
Q Consensus 756 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-~~~~~kl 833 (964)
+...+..++|||| +.+++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++ .++.+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEE
Confidence 9999999999999 78999999997643 489999999999999999999999 999999999999999 8899999
Q ss_pred eccCcccccCCCCCCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 834 SDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
+|||++....... .....|++.|+|||.+.+..+. .++||||+|+++|||++|+.||.... +..
T Consensus 182 ~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------------~~~ 246 (312)
T 2iwi_A 182 IDFGSGALLHDEP--YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------------EIL 246 (312)
T ss_dssp CCCSSCEECCSSC--BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------HHH
T ss_pred EEcchhhhcccCc--ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------------HHh
Confidence 9999998765432 3355689999999998877664 58999999999999999999985321 111
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .....+ ......+.+++.+||+.||++||+++|+++
T Consensus 247 ~----~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 E----AELHFP------AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp H----TCCCCC------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred h----hccCCc------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 111111 122345788899999999999999999987
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=332.66 Aligned_cols=282 Identities=21% Similarity=0.238 Sum_probs=209.6
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCccee
Q 037111 8 NSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLS 87 (964)
Q Consensus 8 ~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~ 87 (964)
+-.++++||++||+++..|+.+.+++|..... ...++|.|.|+.|+.... .++....+.++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~---~~~~~~~~~g~~~~~~~~----------------~l~~~~~~~l~ 84 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANS---NNPQIETRTGRALKATAD----------------LLEDATQPGRV 84 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTT---TCTTSCCSHHHHHHHHHH----------------HHHHHTSTTCC
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhccccc---ccccccccCCcchhhhHH----------------HHhccccccee
Confidence 33468899999999998888888889942110 136789999999963110 00112245678
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHL 167 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l 167 (964)
.|+|++|+++ .+|+.++++++|++|+|++|.++ .+|..++.+++|++|+|++|.++..++.++.+++|++|+|++|++
T Consensus 85 ~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~ 162 (328)
T 4fcg_A 85 ALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPE 162 (328)
T ss_dssp EEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETT
T ss_pred EEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCC
Confidence 8888888887 67888888999999999999988 888888888888888888888885545688888888888888888
Q ss_pred CCCCCCCCCC---------CCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 168 DGPIPVSIGN---------LSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 168 ~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..++.+++|++|+|++|.
T Consensus 163 ~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~ 240 (328)
T 4fcg_A 163 LTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCT 240 (328)
T ss_dssp CCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCT
T ss_pred ccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCc
Confidence 8888877664 777777777777777 667777777777777777777774 44457777777777777777
Q ss_pred cCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCc
Q 037111 239 LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 239 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 312 (964)
+.+.+|..++.+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 241 ~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 241 ALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred chhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 77777777777777777777777777677777777777777777777777777777777777777777666554
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=334.16 Aligned_cols=247 Identities=22% Similarity=0.304 Sum_probs=185.0
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|+..+.||+|+||+||.....+++.||||++..... ..+.+|+.+++++ +||||+++++++.+....|+|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 46888999999999997665556799999999864221 2345799999988 79999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-----CCceEEeccCccccc
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-----EYEAHVSDFGTAKLL 842 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-----~~~~kl~Dfg~a~~~ 842 (964)
|+. |+|.+++..... ...+..+..++.||+.||+|||++ +|+||||||+||+++. ...+||+|||+|+..
T Consensus 99 ~~~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp CCS-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred CCC-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 996 599999976543 244456678999999999999999 9999999999999953 235889999999876
Q ss_pred CCCC---CCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 843 KPDS---SNWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 843 ~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
.... .......||+.|+|||++. ...++.++||||+||++|||++ |..||..... ......
T Consensus 174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~------------~~~~~~ 241 (432)
T 3p23_A 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ------------RQANIL 241 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT------------HHHHHH
T ss_pred cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH------------HHHHHH
Confidence 5432 2234567999999999997 4567889999999999999999 8888742111 111111
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......... .........+.+++.+||+.||++|||+++|++
T Consensus 242 ~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 242 LGACSLDCL--HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTCCCCTTS--CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccCCcccc--CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111111110 011233455778999999999999999999984
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=348.40 Aligned_cols=264 Identities=23% Similarity=0.282 Sum_probs=198.3
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec------C
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------A 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~ 759 (964)
..++|++.+.||+|+||.||+|.. .+|+.||||++... ........+.+|+.++++++||||+++++++.. .
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 457899999999999999999976 46899999998653 344456778999999999999999999999765 6
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc---eEEec
Q 037111 760 RHSFLVYEYLERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE---AHVSD 835 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~---~kl~D 835 (964)
+..++||||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 77899999999999999997643 33588899999999999999999999 9999999999999997765 99999
Q ss_pred cCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCC---CChhHHH
Q 037111 836 FGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG---ANMNEAI 912 (964)
Q Consensus 836 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~---~~~~~~~ 912 (964)
||.+....... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||............. .......
T Consensus 168 FG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 168 LGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 99998765443 2345678999999999999999999999999999999999999986432111000000 0000000
Q ss_pred Hhh------hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 037111 913 DHM------FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIV 957 (964)
Q Consensus 913 ~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ev 957 (964)
... +....+. ...........+.+++.+||.+||++|||++++
T Consensus 247 ~~~l~g~~~~~~~lp~--p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPT--PNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCCSSSCCCCSSSCC--SCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhccccccccccCC--chhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000 1111111 112234466778899999999999999999663
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=310.44 Aligned_cols=229 Identities=12% Similarity=0.069 Sum_probs=181.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|+..+++++||||+++++++.+++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999765 588999999975433 2444578999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++|++|.+++... ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999999532 35567888999999999999999 99999999999999999999998543
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
|++ .++.++|||||||++|||+||+.||............. .......++ ..
T Consensus 175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~--~~ 226 (286)
T 3uqc_A 175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE--------RDTAGQPIE--PA 226 (286)
T ss_dssp -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC--------BCTTSCBCC--HH
T ss_pred -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH--------HHhccCCCC--hh
Confidence 333 36889999999999999999999997544321110000 000011110 01
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
......+..+.+++.+||+.||++| |+.|+++.|+
T Consensus 227 ~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 227 DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence 1112334568889999999999999 9999999985
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-34 Score=317.10 Aligned_cols=307 Identities=26% Similarity=0.358 Sum_probs=170.0
Q ss_pred ccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCcccc
Q 037111 223 FGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLN 302 (964)
Q Consensus 223 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 302 (964)
+..+++|++|++++|.+.. +| .+..+++|++|++++|++++. +. +..+++|++|++++|++++ + ..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCS
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCC
Confidence 3455666666666666653 33 356666666666666666632 22 6666666666666666653 2 2466666666
Q ss_pred EEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCe
Q 037111 303 SLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNK 382 (964)
Q Consensus 303 ~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 382 (964)
+|++++|.+++..+ +..+++|++|++++|.....++ .+..+++|+.|++++|.+.+..+ +..+++|+.|++++|+
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 66666666664422 4445555555555554333322 25555666666666666554433 4555555555555555
Q ss_pred eccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchh
Q 037111 383 FYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE 462 (964)
Q Consensus 383 i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 462 (964)
+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+
T Consensus 189 l~~~~~--------------------------~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-- 238 (347)
T 4fmz_A 189 IEDISP--------------------------LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-- 238 (347)
T ss_dssp CCCCGG--------------------------GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred cccccc--------------------------ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--
Confidence 543322 4444555555555555543322 4455555555555555553322
Q ss_pred hhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccc
Q 037111 463 LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLE 542 (964)
Q Consensus 463 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 542 (964)
+..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+.++++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 55555555555555555432 2355556666666666666543 2355666666666666666655556666666666
Q ss_pred eeeccCCcCCCcccccccccccceEEEecCCccc
Q 037111 543 KLNLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576 (964)
Q Consensus 543 ~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~ 576 (964)
.|+|++|++++..| +..+++|+.||+++|+++
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 66666666665544 556666666666666653
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=315.39 Aligned_cols=306 Identities=24% Similarity=0.376 Sum_probs=153.9
Q ss_pred CcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEE
Q 037111 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNL 160 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L 160 (964)
..+++|+.|++++|.++. +| .+..+++|++|+|++|.+++ +|. +..+++|++|++++|.+++ ++.+..+++|++|
T Consensus 41 ~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~~~~~l~~L~~L 115 (347)
T 4fmz_A 41 EELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-ISALQNLTNLREL 115 (347)
T ss_dssp HHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGGGTTCTTCSEE
T ss_pred hhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-chHHcCCCcCCEE
Confidence 345566666666666653 33 36666666666666666663 333 5666666666666666654 2445566666666
Q ss_pred EcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 161 ALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 161 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
++++|.+++.. . +..+++|++|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|.++
T Consensus 116 ~l~~n~i~~~~-~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 116 YLNEDNISDIS-P-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp ECTTSCCCCCG-G-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCC
T ss_pred ECcCCcccCch-h-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccc
Confidence 66666665432 2 5556666666666664443322 35555555555555555554322 445555555555555555
Q ss_pred CCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccc
Q 037111 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320 (964)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 320 (964)
+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+++.
T Consensus 191 ~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~------ 258 (347)
T 4fmz_A 191 DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI------ 258 (347)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC------
T ss_pred cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC------
Confidence 3222 4455555555555555543222 4444555555555555443221 44444444444444444321
Q ss_pred cCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceE
Q 037111 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGIL 400 (964)
Q Consensus 321 ~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L 400 (964)
..+..+++|+.|++++|.+++. ..+..+++|+.|++++|+
T Consensus 259 --------------------~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~------------------ 298 (347)
T 4fmz_A 259 --------------------NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQ------------------ 298 (347)
T ss_dssp --------------------GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC------------------
T ss_pred --------------------hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCc------------------
Confidence 1233344444444444444432 223334444444444444
Q ss_pred eecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeeccccccc
Q 037111 401 KIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS 456 (964)
Q Consensus 401 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 456 (964)
+++..+..+..+++|++|++++|++++..| +..+++|++|++++|.|+
T Consensus 299 ------l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 299 ------LGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ------CCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ------CCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 443444444455555555555555554433 555556666666665553
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-34 Score=308.82 Aligned_cols=231 Identities=19% Similarity=0.277 Sum_probs=180.1
Q ss_pred hhccccc-ceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHH-hCCCCCceeeEEeeeec----Cc
Q 037111 688 INNFDES-FCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKAL-TGVRHRNIVKFYGFCSH----AR 760 (964)
Q Consensus 688 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~ 760 (964)
.++|.+. +.||+|+||.||+|.. .+++.||+|++.. ...+.+|+.++ +..+||||+++++++.. ..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 4567777 7899999999999976 4789999999863 13566788887 66689999999999977 67
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccC
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFG 837 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg 837 (964)
..++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred eEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 899999999999999999887666799999999999999999999999 9999999999999998 7889999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
++.... +..++.++||||+||++|||++|+.||............ ...+..
T Consensus 166 ~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~-------~~~~~~ 216 (299)
T 3m2w_A 166 FAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM-------KTRIRM 216 (299)
T ss_dssp TCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS-------CCSSCT
T ss_pred cccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH-------HHHHhh
Confidence 986432 234678999999999999999999998643321110000 000001
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+ ..........+.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 217 GQYEFP--NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp TCCSSC--HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCC--chhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111111 0111233456888999999999999999999986
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=313.32 Aligned_cols=254 Identities=26% Similarity=0.442 Sum_probs=206.4
Q ss_pred CCeeecCCCcccc--ccCcccCCCCCCcEEEccC-CeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEe
Q 037111 349 LERVRLEKNQLIG--NISDDFGIYPNLKLFDLSY-NKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELD 425 (964)
Q Consensus 349 L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~-N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 425 (964)
++.|+|++|.+++ ..+..|..+++|+.|+|++ |.+.+..+..+..+++|++|+|++|.+++.+|..|.++++|++|+
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 131 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEe
Confidence 4444444444444 3444444555555555553 555555555556666666666666666666777788888888888
Q ss_pred ccCCcccccCCccccccCCcceeecccccccCCCchhhhccC-CCCceecccCccccccCCCcccccccceecCCccccC
Q 037111 426 FSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLT-DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFS 504 (964)
Q Consensus 426 Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 504 (964)
|++|++++.+|..+..+++|++|+|++|.+++.+|..+..++ +|++|+|++|++++.+|..+..+. |++|++++|+++
T Consensus 132 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~ 210 (313)
T 1ogq_A 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE 210 (313)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE
T ss_pred CCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc
Confidence 888888888888888888899999999988888888888887 899999999999888888888887 999999999999
Q ss_pred ccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCcc
Q 037111 505 QEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEA 584 (964)
Q Consensus 505 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~ 584 (964)
+..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|+|++.+|..|..+++|+.|++++|+++|.+|....
T Consensus 211 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~ 289 (313)
T 1ogq_A 211 GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN 289 (313)
T ss_dssp ECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTT
T ss_pred CcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCcc
Confidence 88899999999999999999999866655 88899999999999999999999999999999999999999999999888
Q ss_pred CCCCCcccccCCCCccCCCC
Q 037111 585 FRHAPVEALQGNKGLCGEVS 604 (964)
Q Consensus 585 ~~~~~~~~~~~n~~~c~~~~ 604 (964)
++.+....+.+|+++||.+.
T Consensus 290 l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 290 LQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp GGGSCGGGTCSSSEEESTTS
T ss_pred ccccChHHhcCCCCccCCCC
Confidence 88888999999999999754
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=346.74 Aligned_cols=236 Identities=25% Similarity=0.364 Sum_probs=190.7
Q ss_pred hcccccceeecCCceeEEEEEeC--CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce-----
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP--SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH----- 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 761 (964)
++|++.+.||+|+||.||+|... +++.||||++... ........+.+|+.++++++||||+++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 57999999999999999999765 5889999998642 334455678999999999999999999999987655
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||++|++|.+++.. .+++..++.++.||+.||+|||++ +||||||||+||+++.+ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchh
Confidence 7999999999999988743 589999999999999999999999 99999999999999875 899999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||...... .++
T Consensus 231 ~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------------------~~~ 285 (681)
T 2pzi_A 231 INSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD--------------------GLP 285 (681)
T ss_dssp TTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS--------------------SCC
T ss_pred cccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc--------------------ccc
Confidence 6543 345799999999998765 489999999999999999998886531110 001
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHh
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKLL 961 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-~~evl~~L 961 (964)
.. .........+.+++.+||++||++||+ ++++...|
T Consensus 286 ~~---~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 323 (681)
T 2pzi_A 286 ED---DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQL 323 (681)
T ss_dssp TT---CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred cc---ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHH
Confidence 00 011223456888999999999999996 55555444
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-33 Score=307.18 Aligned_cols=281 Identities=24% Similarity=0.285 Sum_probs=227.5
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSS 156 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~ 156 (964)
.+|...+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..++.+++|++|++++|.++..++.+. ++
T Consensus 47 ~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~--~~ 124 (332)
T 2ft3_A 47 AVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SS 124 (332)
T ss_dssp SCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC--TT
T ss_pred ccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc--cc
Confidence 3455556899999999999998888899999999999999999998889999999999999999999996665554 89
Q ss_pred CCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCC--CCCCccccCCCCcchhhcccccccCCccccccCccccceeec
Q 037111 157 LKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLP--GSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLEL 234 (964)
Q Consensus 157 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 234 (964)
|++|++++|++++..+..++++++|++|++++|.++ +..|..+..+ +|++|++++|++++ +|..+. ++|++|++
T Consensus 125 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l 200 (332)
T 2ft3_A 125 LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHL 200 (332)
T ss_dssp CCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBC
T ss_pred CCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEEC
Confidence 999999999999777777999999999999999996 4678888888 99999999999996 455443 78999999
Q ss_pred cccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCccc
Q 037111 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314 (964)
Q Consensus 235 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 314 (964)
++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++.
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCcc
Confidence 999999888888999999999999999999877778889999999999999998 7888888999999999999999887
Q ss_pred CCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccc--cccCcccCCCCCCcEEEccCCe
Q 037111 315 LPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLI--GNISDDFGIYPNLKLFDLSYNK 382 (964)
Q Consensus 315 ~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~ 382 (964)
.+..++... ......+|+.|++++|++. +..+..|..+++|+.+++++|+
T Consensus 280 ~~~~~~~~~------------------~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 280 GVNDFCPVG------------------FGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTSSSCSS------------------CCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ChhHccccc------------------cccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 776665421 0011244556666666655 4455556666666666666653
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-34 Score=323.60 Aligned_cols=242 Identities=15% Similarity=0.155 Sum_probs=179.1
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccc-cCchhhHHHHHHHHHHHhCCCC-Cceee--------------
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSF-TGETTHQKEFLSEIKALTGVRH-RNIVK-------------- 751 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h-~niv~-------------- 751 (964)
..|...+.||+|+||+||+|++ .+|+.||||++... .......+.+.+|+.+++.++| ++...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4578889999999999999974 57999999998732 2222335678999999999977 32111
Q ss_pred -------EEeeeec-----CceeEEEEEeccCCCHHHHhh-----hcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 037111 752 -------FYGFCSH-----ARHSFLVYEYLERGSLARILS-----SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814 (964)
Q Consensus 752 -------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ii 814 (964)
+..++.. ....+++|+++ +++|.+++. ......+++..+..++.||++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1111111 12457777776 569999985 22334477889999999999999999999 999
Q ss_pred eccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccccccccccccc----------ccCCCCcchhHHHHHHHHHH
Q 037111 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA----------YTMKVTEKCDVYSFGVLALE 884 (964)
Q Consensus 815 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~sDvwSlGvll~e 884 (964)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999998765433 334567 999999999 55668899999999999999
Q ss_pred HHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 885 VIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 885 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
|++|+.||....... ....++.... ..+..+.+++.+||+.||++||++.++++
T Consensus 310 lltg~~Pf~~~~~~~-----------~~~~~~~~~~----------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAALG-----------GSEWIFRSCK----------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGGS-----------CSGGGGSSCC----------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchhh-----------hHHHHHhhcc----------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999986433211 1111111111 12255888999999999999999877753
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-33 Score=305.97 Aligned_cols=298 Identities=22% Similarity=0.294 Sum_probs=237.1
Q ss_pred CCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCC
Q 037111 46 TPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIP 125 (964)
Q Consensus 46 ~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 125 (964)
..|.|..+.|+. +++ ..+|....+.+++|+|++|++++..+..|+++++|++|+|++|.+++..|
T Consensus 29 c~c~l~~l~~~~-----------~~l----~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 93 (330)
T 1xku_A 29 CQCHLRVVQCSD-----------LGL----EKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISP 93 (330)
T ss_dssp CEEETTEEECTT-----------SCC----CSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCT
T ss_pred CcCCCeEEEecC-----------CCc----cccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCH
Confidence 346777777753 222 23455556899999999999998777799999999999999999998889
Q ss_pred cccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCC--CCCccccCCC
Q 037111 126 SEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG--SIPSSIGNLS 203 (964)
Q Consensus 126 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~ 203 (964)
..++.+++|++|++++|.++..+..+. ++|++|++++|++++..+..++++++|++|++++|.++. ..+..+.+++
T Consensus 94 ~~~~~l~~L~~L~Ls~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~ 171 (330)
T 1xku_A 94 GAFAPLVKLERLYLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 171 (330)
T ss_dssp TTTTTCTTCCEEECCSSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCT
T ss_pred HHhcCCCCCCEEECCCCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCC
Confidence 999999999999999999986555444 799999999999998777789999999999999999963 6778889999
Q ss_pred CcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecc
Q 037111 204 NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLY 283 (964)
Q Consensus 204 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 283 (964)
+|++|++++|+++. +|..+. ++|++|++++|++++..|..+..+++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 172 ~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 248 (330)
T 1xku_A 172 KLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 248 (330)
T ss_dssp TCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECC
T ss_pred CcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECC
Confidence 99999999999985 454443 789999999999998888889999999999999999998777788889999999999
Q ss_pred cccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCcccc--
Q 037111 284 DNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG-- 361 (964)
Q Consensus 284 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-- 361 (964)
+|+++ .+|..+..+++|+.|++++|+|++..+..|+... ......+|+.|++++|++..
T Consensus 249 ~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~~ 309 (330)
T 1xku_A 249 NNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYWE 309 (330)
T ss_dssp SSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGGG
T ss_pred CCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCcccccc
Confidence 99998 7788888899999999999999887776665331 01123456666666666643
Q ss_pred ccCcccCCCCCCcEEEccCCe
Q 037111 362 NISDDFGIYPNLKLFDLSYNK 382 (964)
Q Consensus 362 ~~~~~~~~l~~L~~L~Ls~N~ 382 (964)
+.+..|..+.+++.++|++|+
T Consensus 310 i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 310 IQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCGGGGTTCCCGGGEEC----
T ss_pred cCccccccccceeEEEecccC
Confidence 445566666677777777664
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=302.78 Aligned_cols=287 Identities=23% Similarity=0.287 Sum_probs=220.7
Q ss_pred ceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcC
Q 037111 85 HLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALD 163 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~ 163 (964)
+++.++++++.++ .+|..+. ++|++|+|++|.+++..|..++.+++|++|++++|.+++..|. ++.+++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5667778888887 5777663 6899999999999877777889999999999999998887664 8888899999999
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhccccccc--CCccccccCccccceeeccccccCC
Q 037111 164 GNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLR--GPIPSSFGYLRKLTKLELSNNQLSG 241 (964)
Q Consensus 164 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~ 241 (964)
+|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..+..|..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99888 5666655 78888888888888666667888888888888888886 3667777777 88888888888874
Q ss_pred CChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCccccc
Q 037111 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQ 321 (964)
Q Consensus 242 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 321 (964)
+|..+. ++|++|++++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|+++ .
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~------- 255 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-R------- 255 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-B-------
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-e-------
Confidence 454443 67888888888887766677777888888888888887766667777777777777777776 2
Q ss_pred CCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCC------CCCCcEEEccCCeec--cccCccccC
Q 037111 322 SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGI------YPNLKLFDLSYNKFY--GELSSNWWN 393 (964)
Q Consensus 322 ~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~Ls~N~i~--~~~~~~~~~ 393 (964)
+|..+..+++|+.|++++|++++.....|.. .+.|+.|++++|++. +..+..|..
T Consensus 256 -----------------lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~ 318 (332)
T 2ft3_A 256 -----------------VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRC 318 (332)
T ss_dssp -----------------CCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTT
T ss_pred -----------------cChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccc
Confidence 3444556666777777777776666666543 467999999999997 667788999
Q ss_pred CCccceEeecccc
Q 037111 394 CPQLGILKIAGNN 406 (964)
Q Consensus 394 ~~~L~~L~L~~n~ 406 (964)
+++|+.+++++|+
T Consensus 319 l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 319 VTDRLAIQFGNYK 331 (332)
T ss_dssp BCCSTTEEC----
T ss_pred cchhhhhhccccc
Confidence 9999999999884
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-34 Score=315.59 Aligned_cols=243 Identities=14% Similarity=0.148 Sum_probs=185.2
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccC------chhhHHHHHHHHHHHhCCC---------CCceeeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTG------ETTHQKEFLSEIKALTGVR---------HRNIVKF 752 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~---------h~niv~l 752 (964)
.++|+..+.||+|+||+||+|+. +|+.||||++..... .....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999988 689999999975421 2333467888888888775 5555555
Q ss_pred Eee-----------------eec-------------CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 037111 753 YGF-----------------CSH-------------ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHAL 802 (964)
Q Consensus 753 ~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l 802 (964)
.+. +.+ .+..|+||||+++|++.+.+.. ..+++..++.++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 554 443 6789999999999977666633 3489999999999999999
Q ss_pred HHHh-hCCCCCeEeccCCCCCeEECCCC--------------------ceEEeccCcccccCCCCCCccccccccccccc
Q 037111 803 SYMH-HECRPPIVHRDVSSKNVLLDFEY--------------------EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAP 861 (964)
Q Consensus 803 ~~LH-~~~~~~iiH~dlkp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aP 861 (964)
+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+||
T Consensus 175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aP 246 (336)
T 2vuw_A 175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCS
T ss_pred HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccCh
Confidence 9999 88 999999999999999887 8999999999876532 34799999999
Q ss_pred cccccCCCCcchhHHHHHHH-HHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc-CCCCCccccchHHHHHHHHHH
Q 037111 862 ELAYTMKVTEKCDVYSFGVL-ALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEV 939 (964)
Q Consensus 862 E~~~~~~~~~~sDvwSlGvl-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l 939 (964)
|++.+.. +.++||||+|++ .+++++|..||..... .....+.+... ..+.............++.++
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl 315 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW----------LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEF 315 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH----------HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh----------hhHHHHhhhhhhccCcccchhhhhhcCHHHHHH
Confidence 9998766 899999998777 7778889988642100 01122222211 111111122345677889999
Q ss_pred HHHccCCCCCCCCCHHHHH
Q 037111 940 ALSCVDANPERRPNMQIVC 958 (964)
Q Consensus 940 i~~cl~~dp~~RPs~~evl 958 (964)
+.+||..| |++|++
T Consensus 316 i~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 316 HRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHGGGSS-----SHHHHH
T ss_pred HHHHhccC-----CHHHHH
Confidence 99999876 999988
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=298.90 Aligned_cols=267 Identities=22% Similarity=0.299 Sum_probs=153.2
Q ss_pred ceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCC
Q 037111 85 HLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDG 164 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~ 164 (964)
+++.++++++.++ .+|..+. +.|++|+|++|.+++..+..|+. +++|++|+|++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~-----------------------l~~L~~L~L~~ 85 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKN-----------------------LKNLHTLILIN 85 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTT-----------------------CTTCCEEECCS
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhcc-----------------------CCCCCEEECCC
Confidence 4555566555555 3444332 34555555555555433334444 44555555555
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCC--C
Q 037111 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG--S 242 (964)
Q Consensus 165 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~ 242 (964)
|++++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.++. .
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 162 (330)
T 1xku_A 86 NKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGI 162 (330)
T ss_dssp SCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGB
T ss_pred CcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCc
Confidence 5555444555555555555555555555 3343333 455555555555555555555555666666666665532 4
Q ss_pred ChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccC
Q 037111 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS 322 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 322 (964)
.+..+..+++|++|++++|+++ .+|..+. ++|++|++++|++++..|..+..+++|+.|++++|++++..+..+..+
T Consensus 163 ~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 163 ENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp CTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred ChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 4555666666666666666665 3444332 566666666666666556666666666666666666666555555556
Q ss_pred CcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCC------CCCCcEEEccCCeec
Q 037111 323 GSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGI------YPNLKLFDLSYNKFY 384 (964)
Q Consensus 323 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~Ls~N~i~ 384 (964)
++|++|++++|.+. .+|..+..+++|+.|++++|+++++....|.. .+.++.|++++|++.
T Consensus 240 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 240 PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 66666666666555 45566777777777777777777776666643 255666666666654
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=349.34 Aligned_cols=354 Identities=22% Similarity=0.194 Sum_probs=170.6
Q ss_pred CCCCEEEcCCCCCCCCCCCC-CCCCCCCcEEEEecCCCCC----CCCccccCCCCcchhhcccccccCCccccc-cCcc-
Q 037111 155 SSLKNLALDGNHLDGPIPVS-IGNLSSLVGLYLYNNSLPG----SIPSSIGNLSNLVYLFLKKNHLRGPIPSSF-GYLR- 227 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~- 227 (964)
++|++|+|++|+++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45667777777766433222 5566677777777777663 234455566666666666666654333222 2233
Q ss_pred ---ccceeeccccccCC----CChhhhhcccccceeeccccccccccCCccc-----CccccceeecccccccccC----
Q 037111 228 ---KLTKLELSNNQLSG----SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLS-----NLSSLEILHLYDNQLSGHI---- 291 (964)
Q Consensus 228 ---~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~~---- 291 (964)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 46666666666653 3355566666666666666666543222221 1345666666666655422
Q ss_pred CcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccc-cCCCcCCeeecCCCccccc----cCcc
Q 037111 292 PQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTL-RNCTSLERVRLEKNQLIGN----ISDD 366 (964)
Q Consensus 292 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~----~~~~ 366 (964)
+..+..+++|++|++++|.+++..+..++. .+ ...++|+.|++++|.++.. .+..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~--------------------~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQ--------------------GLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHH--------------------HHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHH--------------------HHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 334444555555555555554432222221 00 0123455555555554442 1233
Q ss_pred cCCCCCCcEEEccCCeeccccC-----ccccCCCccceEeecccccCCC----CCCCCcccccCcEEeccCCcccccCCc
Q 037111 367 FGIYPNLKLFDLSYNKFYGELS-----SNWWNCPQLGILKIAGNNITGG----IPPEIGNATQLHELDFSSNHLVGKVPL 437 (964)
Q Consensus 367 ~~~l~~L~~L~Ls~N~i~~~~~-----~~~~~~~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 437 (964)
+..+++|+.|++++|++++... ..+..+++|++|++++|.++.. ++..+..+++|++|+|++|.+.+..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 3344555555555555543221 1111234444444444444321 223333445555555555555433332
Q ss_pred ccccc-----CCcceeecccccccCC----CchhhhccCCCCceecccCccccccCCCccc-----ccccceecCCcccc
Q 037111 438 ELANL-----TSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRFSKSIPGNMGY-----LLKLHYLNMSSNEF 503 (964)
Q Consensus 438 ~l~~l-----~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l 503 (964)
.+... ++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|++|+|++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 22221 3555555555555433 2333444455555555555554433322221 33455555555555
Q ss_pred Cc----cchhhhhccccCCeecccCcccc
Q 037111 504 SQ----EIPIQLGKLVQLSELDLSHNLLR 528 (964)
Q Consensus 504 ~~----~~~~~~~~l~~L~~L~Ls~N~l~ 528 (964)
++ .+|..+..+++|++|+|++|+++
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 43 34444444455555555555444
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=348.85 Aligned_cols=354 Identities=18% Similarity=0.144 Sum_probs=159.4
Q ss_pred CCCcEEEEecCCCCCCCCcc-ccCCCCcchhhcccccccCC----ccccccCccccceeeccccccCCCChhhhh-ccc-
Q 037111 179 SSLVGLYLYNNSLPGSIPSS-IGNLSNLVYLFLKKNHLRGP----IPSSFGYLRKLTKLELSNNQLSGSIPQEIG-NLK- 251 (964)
Q Consensus 179 ~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~- 251 (964)
++|++|+|++|+++...... +..+++|++|+|++|++++. ++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 34556666666555322111 34445555555555555431 233344445555555555554432222222 122
Q ss_pred ---ccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCccccc-----CC
Q 037111 252 ---LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQ-----SG 323 (964)
Q Consensus 252 ---~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~ 323 (964)
+|++|+|++|+++.... ..++..+..+++|++|++++|.+++..+..++. ..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~--------------------~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 142 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGC--------------------GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQC 142 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGH--------------------HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCceeEEEccCCCCCHHHH--------------------HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCC
Confidence 34444444444442100 122344444444444444444444322222211 12
Q ss_pred cceEEEeecccccc----cccccccCCCcCCeeecCCCccccccCcccC-----CCCCCcEEEccCCeecccc----Ccc
Q 037111 324 SLQYFSVHDNYFIG----SLPKTLRNCTSLERVRLEKNQLIGNISDDFG-----IYPNLKLFDLSYNKFYGEL----SSN 390 (964)
Q Consensus 324 ~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~i~~~~----~~~ 390 (964)
+|++|++++|.+.+ .++..+..+++|++|++++|.++......+. ..++|+.|++++|.+++.. +..
T Consensus 143 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 143 RLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred cceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 34444444443333 2244555566677777777766554333332 2446777777777666532 333
Q ss_pred ccCCCccceEeecccccCCCC-----CCCCcccccCcEEeccCCccccc----CCccccccCCcceeecccccccCCCch
Q 037111 391 WWNCPQLGILKIAGNNITGGI-----PPEIGNATQLHELDFSSNHLVGK----VPLELANLTSLNDLILNGNQLSGGIPP 461 (964)
Q Consensus 391 ~~~~~~L~~L~L~~n~i~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~~ 461 (964)
+..+++|++|++++|.+++.. +..+..+++|++|++++|++++. ++..+..+++|++|+|++|.+++..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 344555555555555544321 11112344555555555555432 333444455555555555555433333
Q ss_pred hhhcc-----CCCCceecccCccccc----cCCCcccccccceecCCccccCccchhhhhc-----cccCCeecccCccc
Q 037111 462 ELGLL-----TDLGYLDLSANRFSKS----IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGK-----LVQLSELDLSHNLL 527 (964)
Q Consensus 462 ~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l 527 (964)
.+... ++|++|+|++|.+++. ++..+..+++|++|++++|++++..+..+.. .++|+.|+|++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 33221 3455555555554433 2223333445555555555554433333332 33455555555554
Q ss_pred cC----CCChhcccccccceeeccCCcCC
Q 037111 528 RG----EIPPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 528 ~~----~~~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
++ .+|..+..+++|++|+|++|+++
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 43 34444444455555555555544
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=297.87 Aligned_cols=279 Identities=22% Similarity=0.197 Sum_probs=224.9
Q ss_pred CCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC
Q 037111 45 TTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124 (964)
Q Consensus 45 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 124 (964)
..+|.|.|+ |+. ++++ +..+|.+.+++|++|+|++|++++..+..|.++++|++|+|++|.+++..
T Consensus 27 ~~~C~~~~~-c~~---------~~~~----l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 27 SLSCDRNGI-CKG---------SSGS----LNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp CCEECTTSE-EEC---------CSTT----CSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred CCCCCCCeE-eeC---------CCCC----cccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccC
Confidence 456899998 863 2333 33566677789999999999999877779999999999999999999888
Q ss_pred CcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCC-CCCCCCCCCcEEEEecC-CCCCCCCccccC
Q 037111 125 PSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIP-VSIGNLSSLVGLYLYNN-SLPGSIPSSIGN 201 (964)
Q Consensus 125 p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~ 201 (964)
|..++.+++|++|++++|++++.++. ++.+++|++|+|++|++++..+ ..++++++|++|++++| .+++..|..+++
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 172 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG 172 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT
T ss_pred HhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccC
Confidence 88999999999999999999988776 8999999999999999995444 48999999999999999 577666788999
Q ss_pred CCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCccc---Cccccc
Q 037111 202 LSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLS---NLSSLE 278 (964)
Q Consensus 202 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~---~l~~L~ 278 (964)
+++|++|++++|++++..|..|..+++|++|++++|+++...+..+..+++|+.|++++|++++..+..+. ....++
T Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~ 252 (353)
T 2z80_A 173 LTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIK 252 (353)
T ss_dssp CCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCC
T ss_pred CCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhh
Confidence 99999999999999999899999999999999999999854444455689999999999999976554433 355677
Q ss_pred eeecccccccc----cCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccc
Q 037111 279 ILHLYDNQLSG----HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIG 337 (964)
Q Consensus 279 ~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~ 337 (964)
.++++++.+++ .+|..+..+++|+.|++++|+++...+..+..+++|++|++++|.+.+
T Consensus 253 ~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 253 KFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp EEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 77777777764 356677778888888888888775433334555555555555555443
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-32 Score=294.79 Aligned_cols=254 Identities=26% Similarity=0.271 Sum_probs=218.8
Q ss_pred CCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccC--c
Q 037111 46 TPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG--K 123 (964)
Q Consensus 46 ~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~--~ 123 (964)
..|.|.+|.|+..+ +..+|.+.+++|++|+|++|++++..+..|+++++|++|+|++|.++. .
T Consensus 5 C~C~~~~l~c~~~~---------------l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 69 (306)
T 2z66_A 5 CSCSGTEIRCNSKG---------------LTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC 69 (306)
T ss_dssp CEEETTEEECCSSC---------------CSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE
T ss_pred CeeCCCEEEcCCCC---------------cccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC
Confidence 34899999997432 234566667899999999999996545568999999999999999983 3
Q ss_pred CCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCC-CCCCCCCCCcEEEEecCCCCCCCCccccCC
Q 037111 124 IPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIP-VSIGNLSSLVGLYLYNNSLPGSIPSSIGNL 202 (964)
Q Consensus 124 ~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 202 (964)
+|..+..+++|++|++++|.+++.++.+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|..+.++
T Consensus 70 ~~~~~~~~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 149 (306)
T 2z66_A 70 CSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149 (306)
T ss_dssp EEHHHHSCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC
T ss_pred cccccccccccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC
Confidence 4677788999999999999999776678999999999999999997655 578999999999999999998888889999
Q ss_pred CCcchhhcccccccC-CccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceee
Q 037111 203 SNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILH 281 (964)
Q Consensus 203 ~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 281 (964)
++|++|+|++|.+++ ..|..|..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 999999999999987 5788899999999999999999988788899999999999999999876666788889999999
Q ss_pred cccccccccCCcccccCc-cccEEEeeCccCccc
Q 037111 282 LYDNQLSGHIPQEIGNFM-NLNSLSVGGNQFTGF 314 (964)
Q Consensus 282 L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~ 314 (964)
|++|++++..|..+..++ +|+.|++++|++++.
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 999999988888888884 899999999988764
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-32 Score=326.95 Aligned_cols=394 Identities=14% Similarity=0.051 Sum_probs=237.7
Q ss_pred CCCCCcEEEEecCCCCCCCCccccCC--CCcchhhccccc-ccC-CccccccCccccceeeccccccCCC----Chhhhh
Q 037111 177 NLSSLVGLYLYNNSLPGSIPSSIGNL--SNLVYLFLKKNH-LRG-PIPSSFGYLRKLTKLELSNNQLSGS----IPQEIG 248 (964)
Q Consensus 177 ~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~-l~~-~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~ 248 (964)
.+++|++|+|++|.+++..+..++.. .+|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 45666666666666554444444442 236666666654 111 1122223566777777777776654 333445
Q ss_pred cccccceeeccccccc----cccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCc---ccCCccccc
Q 037111 249 NLKLLTDLSLSQNQLR----GTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT---GFLPQNICQ 321 (964)
Q Consensus 249 ~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~---~~~p~~~~~ 321 (964)
.+++|++|++++|.++ +.++..+.++++|+.|++++|.+.+ +|..+..+++|+.|+++.+... +..+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 5677777777777765 2333444566777777777777664 5566677777777777653222 223344555
Q ss_pred CCcceEEEeecccccccccccccCCCcCCeeecCCCccccccC-cccCCCCCCcEEEccCCeecccc-CccccCCCccce
Q 037111 322 SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS-DDFGIYPNLKLFDLSYNKFYGEL-SSNWWNCPQLGI 399 (964)
Q Consensus 322 ~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~-~~~~~~~~~L~~ 399 (964)
+.+|+.|+++++. ...+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++ +.+.+.. ......+++|++
T Consensus 269 ~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 269 PRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp CTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCE
T ss_pred cccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCE
Confidence 6667777776642 33456667777778888887777655433 335667778888777 4443322 222345677777
Q ss_pred Eeecc-----------cccCCCCC-CCCcccccCcEEeccCCcccccCCccccc-cCCcceeecc----cccccCC----
Q 037111 400 LKIAG-----------NNITGGIP-PEIGNATQLHELDFSSNHLVGKVPLELAN-LTSLNDLILN----GNQLSGG---- 458 (964)
Q Consensus 400 L~L~~-----------n~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-l~~L~~L~L~----~N~l~~~---- 458 (964)
|++++ |.+++... .....+++|++|+++.|++++..+..++. +++|+.|+|+ .|.+++.
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 77773 34442211 11234677888888777777666666654 7778888885 5666643
Q ss_pred -CchhhhccCCCCceecccC--ccccccCCCccc-ccccceecCCccccCcc-chhhhhccccCCeecccCccccCC-CC
Q 037111 459 -IPPELGLLTDLGYLDLSAN--RFSKSIPGNMGY-LLKLHYLNMSSNEFSQE-IPIQLGKLVQLSELDLSHNLLRGE-IP 532 (964)
Q Consensus 459 -~~~~~~~l~~L~~L~Ls~N--~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~-~~ 532 (964)
++..+..+++|++|+|++| .+++..+..+.. +++|++|++++|++++. ++..+..+++|+.|+|++|.+++. ++
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 506 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIA 506 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHH
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHH
Confidence 3344566778888888643 355544444433 67788888888887753 344556778888888888887644 23
Q ss_pred hhcccccccceeeccCCcCCCcccccc-cccccceEEEecCC
Q 037111 533 PEICNLESLEKLNLSHNNLSGSIPTNF-ENMHGLLSIDISYN 573 (964)
Q Consensus 533 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~l~ls~N 573 (964)
..+..+++|+.|+|++|+++......+ ..++.+....+..+
T Consensus 507 ~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 507 AAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 334567788888888888775533333 34566666655554
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-33 Score=331.57 Aligned_cols=423 Identities=15% Similarity=0.079 Sum_probs=241.8
Q ss_pred CcCcceeEEeccCCcc---ccCCCcccc------------CCCCcCeeecccCCccCcCCcccCCC--CcccEEEccccc
Q 037111 81 SLFSHLSYLDLNENQL---YGNIPSPIG------------NLTKLKFLNLSSNHFSGKIPSEIGLL--TNLEVLHMFVNH 143 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l---~~~~p~~~~------------~l~~L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~l~~n~ 143 (964)
..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..++.+ .+|++|+|++|.
T Consensus 70 ~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~ 149 (592)
T 3ogk_B 70 RRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCS 149 (592)
T ss_dssp HHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCE
T ss_pred HhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCC
Confidence 3466777777766422 134444333 56666666666666665555555442 236666666554
Q ss_pred -cCC-cccc-cCCCCCCCEEEcCCCCCCCC----CCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhccccccc
Q 037111 144 -LNG-SIPE-IGHLSSLKNLALDGNHLDGP----IPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLR 216 (964)
Q Consensus 144 -l~~-~~~~-~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 216 (964)
++. .++. ...+++|++|+|++|.+++. ++..+.++++|++|++++|.+++..+
T Consensus 150 ~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~-------------------- 209 (592)
T 3ogk_B 150 GFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISP-------------------- 209 (592)
T ss_dssp EEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCH--------------------
T ss_pred CcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCH--------------------
Confidence 110 0111 12455555555555555433 11222334444444444444431111
Q ss_pred CCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccc---cccCCcccCccccceeecccccccccCCc
Q 037111 217 GPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR---GTVPSSLSNLSSLEILHLYDNQLSGHIPQ 293 (964)
Q Consensus 217 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 293 (964)
+.++..+..+++|++|+|++|.+.+ +|..+..+++|++|+++.+... +..+..+..+++|+.|+++++... .+|.
T Consensus 210 ~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~ 287 (592)
T 3ogk_B 210 KDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPI 287 (592)
T ss_dssp HHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGG
T ss_pred HHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHH
Confidence 1223344556677777777777664 5666777777777777653322 223345666777777777765433 5666
Q ss_pred ccccCccccEEEeeCccCcccCC-cccccCCcceEEEeecccccccccccccCCCcCCeeecC-----------CCcccc
Q 037111 294 EIGNFMNLNSLSVGGNQFTGFLP-QNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE-----------KNQLIG 361 (964)
Q Consensus 294 ~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~-----------~N~l~~ 361 (964)
.+..+++|++|++++|.+++... ..+..+++|+.|+++++...+.++..+..+++|++|+++ .|.++.
T Consensus 288 ~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~ 367 (592)
T 3ogk_B 288 LFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQ 367 (592)
T ss_dssp GGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCH
T ss_pred HHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCH
Confidence 67777777777777777654332 223455666666666332222334444556666666666 244443
Q ss_pred ccCcc-cCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcc-cccCcEEecc----CCccccc-
Q 037111 362 NISDD-FGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGN-ATQLHELDFS----SNHLVGK- 434 (964)
Q Consensus 362 ~~~~~-~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~- 434 (964)
..... +..+++|+.|+++.|++++... ..+.. +++|+.|+++ .|++++.
T Consensus 368 ~~~~~l~~~~~~L~~L~l~~~~l~~~~~------------------------~~l~~~~~~L~~L~l~~~~~~n~l~~~p 423 (592)
T 3ogk_B 368 RGLIALAQGCQELEYMAVYVSDITNESL------------------------ESIGTYLKNLCDFRLVLLDREERITDLP 423 (592)
T ss_dssp HHHHHHHHHCTTCSEEEEEESCCCHHHH------------------------HHHHHHCCSCCEEEEEECSCCSCCSSCC
T ss_pred HHHHHHHhhCccCeEEEeecCCccHHHH------------------------HHHHhhCCCCcEEEEeecCCCccccCch
Confidence 21111 2234555555555555544332 23322 4556666664 4555532
Q ss_pred ----CCccccccCCcceeecccc--cccCCCchhhhc-cCCCCceecccCccccc-cCCCcccccccceecCCccccCcc
Q 037111 435 ----VPLELANLTSLNDLILNGN--QLSGGIPPELGL-LTDLGYLDLSANRFSKS-IPGNMGYLLKLHYLNMSSNEFSQE 506 (964)
Q Consensus 435 ----~~~~l~~l~~L~~L~L~~N--~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~ 506 (964)
++..+..+++|+.|+|++| .+++..+..+.. +++|++|+|++|.+++. .+..+..+++|++|++++|.+++.
T Consensus 424 ~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 424 LDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp CHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 2233566788888888643 355555555543 78899999999988763 344456788999999999998765
Q ss_pred -chhhhhccccCCeecccCccccCCCChhc-ccccccceeeccCC
Q 037111 507 -IPIQLGKLVQLSELDLSHNLLRGEIPPEI-CNLESLEKLNLSHN 549 (964)
Q Consensus 507 -~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N 549 (964)
++..+..+++|+.|+|++|++++.....+ ..++.+....+..+
T Consensus 504 ~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 504 AIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 34455678999999999999986544444 35677766666554
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-30 Score=287.07 Aligned_cols=275 Identities=22% Similarity=0.221 Sum_probs=155.0
Q ss_pred eEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCC
Q 037111 87 SYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNH 166 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~ 166 (964)
...|+++|.++ .+|..+. ++|++|+|++|++++..+..++.+++| ++|+|++|+
T Consensus 34 ~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L-----------------------~~L~L~~n~ 87 (353)
T 2z80_A 34 GICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNL-----------------------QALVLTSNG 87 (353)
T ss_dssp SEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTC-----------------------CEEECTTSC
T ss_pred eEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCC-----------------------CEEECCCCc
Confidence 34555555555 3444332 355555555555554333344444444 445555555
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCcc-ccccCccccceeecccc-ccCCCCh
Q 037111 167 LDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIP-SSFGYLRKLTKLELSNN-QLSGSIP 244 (964)
Q Consensus 167 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~p 244 (964)
+++..|..|+++++|++|+|++|++++..+..++++++|++|+|++|++++..+ ..|..+++|++|++++| .+++..+
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 444444445555555555555555553322334555555555555555553332 34555555555555555 3444444
Q ss_pred hhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccc---c
Q 037111 245 QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC---Q 321 (964)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~---~ 321 (964)
..+..+++|++|++++|++++..|..+..+++|++|++++|+++...+..+..+++|+.|++++|.+++..+..+. .
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~ 247 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------C
T ss_pred HHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccc
Confidence 4555555666666666666555555566666666666666665432222334456666666666666655444332 2
Q ss_pred CCcceEEEeecccccc----cccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeecccc
Q 037111 322 SGSLQYFSVHDNYFIG----SLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGEL 387 (964)
Q Consensus 322 ~~~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~ 387 (964)
...++.++++++.+.+ .+|..+..+++|+.|++++|+++.++...|..+++|+.|+|++|++.+..
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 3456666666666554 45677788888888888888888777777788888888888888887543
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=289.66 Aligned_cols=236 Identities=25% Similarity=0.256 Sum_probs=204.0
Q ss_pred CCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCC
Q 037111 76 DQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHL 154 (964)
Q Consensus 76 ~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l 154 (964)
..+|.+..+++++|+|++|++++..|..|+++++|++|+|++|.|++..|..|..+++|++|+|++|++++.++. +..+
T Consensus 67 ~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 146 (452)
T 3zyi_A 67 SEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYL 146 (452)
T ss_dssp SSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSC
T ss_pred CccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhccc
Confidence 355666778999999999999998899999999999999999999988888999999999999999999988776 8889
Q ss_pred CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecC-CCCCCCCccccCCCCcchhhcccccccCCccccccCccccceee
Q 037111 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNN-SLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLE 233 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 233 (964)
++|++|+|++|++++..+..|.++++|++|++++| .+....+..|.++++|++|+|++|++++. | .+..+++|++|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 224 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELE 224 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEE
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEE
Confidence 99999999999999777778999999999999984 55544445688899999999999999864 3 478888999999
Q ss_pred ccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc
Q 037111 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 234 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 225 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 225 MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 99999988888888899999999999999988888888888999999999999887777778888888888888888764
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=270.95 Aligned_cols=224 Identities=24% Similarity=0.276 Sum_probs=164.4
Q ss_pred CCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEE
Q 037111 106 NLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLY 185 (964)
Q Consensus 106 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 185 (964)
..++++.|+|++|+++ .+|..++.+++|++|+|++|.++..+..++.+++|++|+|++|+++ .+|..++++++|++|+
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 3578999999999999 8999999999999999999999955446899999999999999999 7899999999999999
Q ss_pred EecCCCCCCCCccccC---------CCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhccccccee
Q 037111 186 LYNNSLPGSIPSSIGN---------LSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDL 256 (964)
Q Consensus 186 L~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 256 (964)
|++|++.+.+|..++. +++|++|+|++|+++ .+|..++.+++|++|+|++|++++ +|..++.+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 9999988899987764 666666666666666 455566666666666666666663 44456666666666
Q ss_pred eccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecc
Q 037111 257 SLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDN 333 (964)
Q Consensus 257 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n 333 (964)
+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..+++++.+++..+
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 66666666666666666666666666666666666666666666666666666666555555555555555554443
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=271.03 Aligned_cols=224 Identities=25% Similarity=0.282 Sum_probs=162.2
Q ss_pred eEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccc
Q 037111 62 ISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFV 141 (964)
Q Consensus 62 ~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~ 141 (964)
+.+++++.+++ .+|.+.+++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..++.+++|++|++++
T Consensus 14 ~~~~c~~~~l~----~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ----AVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS----SCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc----cCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 34455555443 45667778899999999999887777889999999999999999877788888888888888888
Q ss_pred cc-cCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCc
Q 037111 142 NH-LNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPI 219 (964)
Q Consensus 142 n~-l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 219 (964)
|. ++...|. +..+++|++|+|++|++++..|..+.++++|++|++++|++++..+..|+++++|++|+|++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 86 6665443 777788888888888887777777777788888888888777665566777777777777777777655
Q ss_pred cccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccc
Q 037111 220 PSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289 (964)
Q Consensus 220 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 289 (964)
+..|..+++|++|+|++|.+++..|..|..+++|+.|++++|++++..+..+..+++|++|++++|++..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 5566666666666666666666556666666666666666666665444445666666666666666553
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=268.45 Aligned_cols=255 Identities=25% Similarity=0.258 Sum_probs=214.3
Q ss_pred eEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCccc-ccCCCCCCCEEEcCCC
Q 037111 87 SYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGN 165 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~L~~n 165 (964)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..++.+++|++|++++|.+++..| .+..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 57889999998 467654 5799999999999997777789999999999999999998866 4889999999999999
Q ss_pred C-CCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCCh
Q 037111 166 H-LDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244 (964)
Q Consensus 166 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 244 (964)
. +++..|..+..+++|++|++++|++++..|..+.++++|++|+|++|++++..+..|+.+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 7 887778899999999999999999998888889999999999999999998877889999999999999999997766
Q ss_pred hhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCc
Q 037111 245 QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS 324 (964)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 324 (964)
..+..+++|++|+|++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|++....+.. .....
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~ 249 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAW 249 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHH
Confidence 77899999999999999999888889999999999999999999766677899999999999999988543321 11123
Q ss_pred ceEEEeecccccccccccccC
Q 037111 325 LQYFSVHDNYFIGSLPKTLRN 345 (964)
Q Consensus 325 L~~L~l~~n~l~~~~p~~l~~ 345 (964)
++.+....+.+....|..+.+
T Consensus 250 l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 250 LQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp HHHCCSEECCCBEEESGGGTT
T ss_pred HHhcccccCccccCCchHhCC
Confidence 444445566666666655543
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=267.96 Aligned_cols=248 Identities=24% Similarity=0.252 Sum_probs=130.9
Q ss_pred ceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccccc--CCcccccCccccEEEee
Q 037111 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGH--IPQEIGNFMNLNSLSVG 307 (964)
Q Consensus 230 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~l~ 307 (964)
+.++++++.++ .+|..+ .++|++|+|++|+++...+..|.++++|++|+|++|+++.. .+..+..+++|+.|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35556666655 334322 24556666666666533333355556666666666655521 23444445555555555
Q ss_pred CccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccC-cccCCCCCCcEEEccCCeeccc
Q 037111 308 GNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS-DDFGIYPNLKLFDLSYNKFYGE 386 (964)
Q Consensus 308 ~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~ 386 (964)
+|.+++ +|..+..+++|++|++++|.+++... ..+..+++|+.|++++|++.+.
T Consensus 87 ~n~i~~-------------------------l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 141 (306)
T 2z66_A 87 FNGVIT-------------------------MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 141 (306)
T ss_dssp SCSEEE-------------------------EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEEC
T ss_pred CCcccc-------------------------ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCcc
Confidence 554442 23334455555555555555555443 4455555555555555555544
Q ss_pred cCccccCCCccceEeecccccCC-CCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhc
Q 037111 387 LSSNWWNCPQLGILKIAGNNITG-GIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL 465 (964)
Q Consensus 387 ~~~~~~~~~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 465 (964)
.+..+..+++|++|++++|.+++ ..|..+..+++|++|+|++|++++..|..+..+++|++|+|++|.+++..+..+..
T Consensus 142 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp STTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred chhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 44444444445555554444443 34455555556666666666665555555555566666666666555544445555
Q ss_pred cCCCCceecccCccccccCCCccccc-ccceecCCccccCc
Q 037111 466 LTDLGYLDLSANRFSKSIPGNMGYLL-KLHYLNMSSNEFSQ 505 (964)
Q Consensus 466 l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~ 505 (964)
+++|++|+|++|++++..|..+..++ +|++|+|++|.++.
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 55555555555555555555555552 55555555555543
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=281.50 Aligned_cols=236 Identities=28% Similarity=0.291 Sum_probs=201.4
Q ss_pred CCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCC
Q 037111 76 DQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHL 154 (964)
Q Consensus 76 ~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l 154 (964)
..+|.+..++++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|++++.++. +..+
T Consensus 56 ~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 135 (440)
T 3zyj_A 56 REVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL 135 (440)
T ss_dssp SSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSC
T ss_pred CcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhcc
Confidence 456777778999999999999988889999999999999999999987778899999999999999999987774 8899
Q ss_pred CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecC-CCCCCCCccccCCCCcchhhcccccccCCccccccCccccceee
Q 037111 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNN-SLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLE 233 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 233 (964)
++|++|+|++|++++..+..|.++++|++|+|++| .++...+..|.++++|++|+|++|+++.. | .+..+++|++|+
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 213 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELD 213 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEE
Confidence 99999999999999777778999999999999985 44434445788889999999999998843 4 477888888888
Q ss_pred ccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc
Q 037111 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 234 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++..
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 88888887778888888888888888888887778888888888888888888887777777888888888888888763
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-30 Score=278.92 Aligned_cols=244 Identities=21% Similarity=0.182 Sum_probs=166.3
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCc-cCcCCcccC-------CCCcccEEEccccccCCcccc-c-
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHF-SGKIPSEIG-------LLTNLEVLHMFVNHLNGSIPE-I- 151 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l-~~~~p~~~~-------~l~~L~~L~l~~n~l~~~~~~-~- 151 (964)
..++|+.|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. .+++|++|+|++|++++.+|. +
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 345677888888888 677766554 88888888888 456666665 677888888888888776664 3
Q ss_pred -CCCCCCCEEEcCCCCCCCCCCCCCCCC-----CCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCC--ccccc
Q 037111 152 -GHLSSLKNLALDGNHLDGPIPVSIGNL-----SSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGP--IPSSF 223 (964)
Q Consensus 152 -~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~ 223 (964)
+.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.+. .+..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 7778888888888888766 6666666 7788888888888777777777888888888888877654 23333
Q ss_pred --cCccccceeeccccccCCC--Ch-hhhhcccccceeeccccccccccC-CcccCccccceeecccccccccCCccccc
Q 037111 224 --GYLRKLTKLELSNNQLSGS--IP-QEIGNLKLLTDLSLSQNQLRGTVP-SSLSNLSSLEILHLYDNQLSGHIPQEIGN 297 (964)
Q Consensus 224 --~~l~~L~~L~L~~N~l~~~--~p-~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 297 (964)
..+++|++|+|++|++++. ++ ..+..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+.
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~- 273 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP- 273 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-
Confidence 6777788888888877731 11 333456777777777777776554 34555677777777777777 5665554
Q ss_pred CccccEEEeeCccCcccCCcccccCCcceEEEeecccc
Q 037111 298 FMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYF 335 (964)
Q Consensus 298 l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l 335 (964)
++|+.|++++|+|++. |. +..+++|++|++++|.+
T Consensus 274 -~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l 308 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPF 308 (312)
T ss_dssp -SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTT
T ss_pred -CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCC
Confidence 6677777777776654 32 44444444444444433
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8.8e-28 Score=277.52 Aligned_cols=232 Identities=22% Similarity=0.209 Sum_probs=190.4
Q ss_pred CcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEec
Q 037111 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDF 426 (964)
Q Consensus 347 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 426 (964)
++++.|+|++|.|+++.+..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|.|+...+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 45666777777777666667777777777777777777666667777777777777777777676777888888888888
Q ss_pred cCCcccccCCccccccCCcceeeccc-ccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCc
Q 037111 427 SSNHLVGKVPLELANLTSLNDLILNG-NQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ 505 (964)
Q Consensus 427 s~N~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 505 (964)
++|+|+...+..|..+++|+.|+|++ |.+....+..|..+++|++|+|++|++++. | .+..+++|++|+|++|+|++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 88888877777788888888888888 455544445688889999999999998754 3 57888999999999999998
Q ss_pred cchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 506 EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 506 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
..|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 889999999999999999999998888899999999999999999998888889999999999999999988654
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-30 Score=281.69 Aligned_cols=245 Identities=22% Similarity=0.233 Sum_probs=209.7
Q ss_pred CeeEEecCCCCCCCccCCCccCcCcceeEEeccCCcc-ccCCCcccc-------CCCCcCeeecccCCccCcCCccc--C
Q 037111 60 RIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQL-YGNIPSPIG-------NLTKLKFLNLSSNHFSGKIPSEI--G 129 (964)
Q Consensus 60 ~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l-~~~~p~~~~-------~l~~L~~L~Ls~n~l~~~~p~~~--~ 129 (964)
+++.+++.++.+ .+|......|+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+ +
T Consensus 44 ~L~~l~l~~n~l-----~~p~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 44 SLEYLLKRVDTE-----ADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp ECTTHHHHCCTT-----CCCHHHHHHHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CceeEeeccccc-----ccHHHHHHHHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 455666777766 33444455699999999999 456887776 89999999999999999999987 9
Q ss_pred CCCcccEEEccccccCCcccccCCC-----CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC--CCccc--c
Q 037111 130 LLTNLEVLHMFVNHLNGSIPEIGHL-----SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS--IPSSI--G 200 (964)
Q Consensus 130 ~l~~L~~L~l~~n~l~~~~~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~ 200 (964)
.+++|++|+|++|++++.++.++.+ ++|++|+|++|++++..|..++++++|++|+|++|++.+. .|..+ +
T Consensus 119 ~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred cCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 9999999999999999985446666 9999999999999998889999999999999999998865 34444 8
Q ss_pred CCCCcchhhcccccccCC---ccccccCccccceeeccccccCCCCh-hhhhcccccceeeccccccccccCCcccCccc
Q 037111 201 NLSNLVYLFLKKNHLRGP---IPSSFGYLRKLTKLELSNNQLSGSIP-QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSS 276 (964)
Q Consensus 201 ~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 276 (964)
++++|++|+|++|++++. ....+..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 999999999999999942 22445688999999999999998775 45667899999999999999 7888776 89
Q ss_pred cceeecccccccccCCcccccCccccEEEeeCccCccc
Q 037111 277 LEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314 (964)
Q Consensus 277 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 314 (964)
|++|+|++|+|++. |. +..+++|+.|++++|++++.
T Consensus 276 L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 276 LSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp EEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred ceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 99999999999965 66 99999999999999999863
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=290.40 Aligned_cols=290 Identities=25% Similarity=0.339 Sum_probs=142.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCceeeceEeCC-------CCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCC
Q 037111 28 NSLLPSWTLDPVNATNITTPCTWSGISCNH-------AGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNI 100 (964)
Q Consensus 28 ~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~-------~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~ 100 (964)
...+++|..+ ++||.|.|..|.. ...++.+++++++++ .+|...+++|++|+|++|+|+ .+
T Consensus 9 ~~~w~~W~~~-------~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~----~lp~~l~~~L~~L~L~~N~l~-~l 76 (622)
T 3g06_A 9 DAVWSAWRRA-------APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT----TLPDCLPAHITTLVIPDNNLT-SL 76 (622)
T ss_dssp -CHHHHHHHT-------CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS----CCCSCCCTTCSEEEECSCCCS-CC
T ss_pred HHHHHHHHhc-------CCcchhccccccCcccccccCCCCcEEEecCCCcC----ccChhhCCCCcEEEecCCCCC-CC
Confidence 3455667542 5789997754421 123455555555544 222223345555555555555 23
Q ss_pred CccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCC
Q 037111 101 PSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSS 180 (964)
Q Consensus 101 p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 180 (964)
|. .+++|++|+|++|.|+ .+|. .+++|++|+|++|++++.++ .+++|+.|++++|++++ +|.. +++
T Consensus 77 p~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~ 142 (622)
T 3g06_A 77 PA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA---LPSGLCKLWIFGNQLTS-LPVL---PPG 142 (622)
T ss_dssp CC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCCCC---CCTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred CC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCCCC---CCCCcCEEECCCCCCCc-CCCC---CCC
Confidence 33 3455555555555555 3443 44555555555555554332 34455555555555553 3332 244
Q ss_pred CcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccc
Q 037111 181 LVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQ 260 (964)
Q Consensus 181 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 260 (964)
|++|+|++|++++ +|.. +++|+.|++++|.+++ +| ..+++|+.|+|++|++++
T Consensus 143 L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~------------------- 195 (622)
T 3g06_A 143 LQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS------------------- 195 (622)
T ss_dssp CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-------------------
T ss_pred CCEEECcCCcCCC-cCCc---cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-------------------
Confidence 5555555555542 2321 2344444555555543 22 223444455555554442
Q ss_pred cccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeeccccccccc
Q 037111 261 NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLP 340 (964)
Q Consensus 261 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p 340 (964)
+|.. +++|+.|++++|.++ .+|.. +++|+.|++++|+|++. | ..+++|+.|++++|.+.. +|
T Consensus 196 ------l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~l-p---~~l~~L~~L~Ls~N~L~~-lp 257 (622)
T 3g06_A 196 ------LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSL-P---VLPSELKELMVSGNRLTS-LP 257 (622)
T ss_dssp ------CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CC
T ss_pred ------CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcC-C---CCCCcCcEEECCCCCCCc-CC
Confidence 2221 234444445544444 22221 24455555555555442 2 223445555555555443 22
Q ss_pred ccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCcccc
Q 037111 341 KTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW 392 (964)
Q Consensus 341 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 392 (964)
. .+++|+.|+|++|+|+.+ +..+..+++|+.|+|++|++++..+..+.
T Consensus 258 ~---~~~~L~~L~Ls~N~L~~l-p~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 258 M---LPSGLLSLSVYRNQLTRL-PESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp C---CCTTCCEEECCSSCCCSC-CGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred c---ccccCcEEeCCCCCCCcC-CHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 2 345666777777777643 45566677777777777777665554443
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=275.50 Aligned_cols=251 Identities=22% Similarity=0.272 Sum_probs=143.2
Q ss_pred CcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEe
Q 037111 109 KLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLY 187 (964)
Q Consensus 109 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 187 (964)
..+.++.++++++ .+|..+. +++++|+|++|++++..+. +..+++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3556777777776 5665543 4555555555555544432 4555555555555555554444455555555555555
Q ss_pred cCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecccccccccc
Q 037111 188 NNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTV 267 (964)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 267 (964)
+|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++| |.+....
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~-----------------------~~l~~i~ 177 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL-----------------------KRLSYIS 177 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC-----------------------TTCCEEC
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCC-----------------------CCcceeC
Confidence 55555443344555555555555555555444444444455555555442 2222222
Q ss_pred CCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCC
Q 037111 268 PSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCT 347 (964)
Q Consensus 268 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~ 347 (964)
+..|.++++|++|+|++|+++ .+| .+..+++|+.|+|++|++++..|..|..+++|+.|++++|.+.+..+..|.+++
T Consensus 178 ~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 178 EGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp TTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred cchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 223444555555555555554 223 244455555555555555555555555555555555555555556667777788
Q ss_pred cCCeeecCCCccccccCcccCCCCCCcEEEccCCeecccc
Q 037111 348 SLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGEL 387 (964)
Q Consensus 348 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~ 387 (964)
+|+.|+|++|+++++.+..|..+++|+.|+|++|++.+..
T Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 256 SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 8888888888888888888888888888888888887543
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=252.81 Aligned_cols=216 Identities=28% Similarity=0.310 Sum_probs=130.0
Q ss_pred CCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC
Q 037111 45 TTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124 (964)
Q Consensus 45 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 124 (964)
.++|.|.|+.|...+.++.++++++.++. +|....+++++|+|++|++++..+..|+++++|++|+|++|.+++..
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~----ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTA----IPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSS----CCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCc----cCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 36899999999876667778887776653 34444567777777777777655567777777777777777777443
Q ss_pred CcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCC
Q 037111 125 PSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLS 203 (964)
Q Consensus 125 p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 203 (964)
+..+..+++|++|++++|.+++.++. +..+++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 44456666666666666666655543 45566666666666666655555555566666666666655544444455555
Q ss_pred CcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccc
Q 037111 204 NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 204 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 264 (964)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 5555555555555444444445555555555555554433334444444444444444443
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-29 Score=274.67 Aligned_cols=258 Identities=20% Similarity=0.224 Sum_probs=172.8
Q ss_pred eeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCC
Q 037111 86 LSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGN 165 (964)
Q Consensus 86 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n 165 (964)
++.++++.+.+...++..+..+++|++|+|++|.+++..|..++.+++|++|+|++|.+++.++ +..+++|++|+|++|
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCC
Confidence 4555666666654444445556677777777777776656667777777777777777766554 667777777777777
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChh
Q 037111 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQ 245 (964)
Q Consensus 166 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 245 (964)
++++.. ..++|++|++++|++++..+. .+++|++|++++|++++..+..|+.+++|++|+|++|++++..+.
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 776432 226777777777777754333 246677777777777776666777777777777777777766565
Q ss_pred hhh-cccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCc
Q 037111 246 EIG-NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS 324 (964)
Q Consensus 246 ~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 324 (964)
.+. .+++|++|+|++|++++. +. ...+++|++|+|++|++++ +|..+..+++|+.|++++|++++ +|..+..+++
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~ 238 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQN 238 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTT
T ss_pred HHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCC
Confidence 553 567777777777777744 32 2347777777777777774 44457777777777777777774 3555666666
Q ss_pred ceEEEeeccccc-ccccccccCCCcCCeeecCC
Q 037111 325 LQYFSVHDNYFI-GSLPKTLRNCTSLERVRLEK 356 (964)
Q Consensus 325 L~~L~l~~n~l~-~~~p~~l~~l~~L~~L~L~~ 356 (964)
|+.|++++|.+. +.+|..+..+++|+.+++++
T Consensus 239 L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~ 271 (317)
T 3o53_A 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (317)
T ss_dssp CCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCEEEccCCCccCcCHHHHHhccccceEEECCC
Confidence 666666666665 55666666677777777663
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-29 Score=272.91 Aligned_cols=268 Identities=18% Similarity=0.207 Sum_probs=197.1
Q ss_pred ccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecC
Q 037111 276 SLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355 (964)
Q Consensus 276 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 355 (964)
+++.++++.+.+...+...+..+++|+.|++++|++++..|..+..+++|++|++++|.+.+..+ +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45566777777765555556667788888888888877666666666666666666655554433 4455555555555
Q ss_pred CCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccC
Q 037111 356 KNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKV 435 (964)
Q Consensus 356 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 435 (964)
+|.+++.. ..++|++|++++|.+++..+.. +++|++|++++|++++..
T Consensus 89 ~n~l~~l~-----------------------------~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~ 136 (317)
T 3o53_A 89 NNYVQELL-----------------------------VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLR 136 (317)
T ss_dssp SSEEEEEE-----------------------------ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGG
T ss_pred CCcccccc-----------------------------CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCcc
Confidence 55444322 1245555555555555443332 466888888888888777
Q ss_pred CccccccCCcceeecccccccCCCchhhh-ccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhcc
Q 037111 436 PLELANLTSLNDLILNGNQLSGGIPPELG-LLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKL 514 (964)
Q Consensus 436 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 514 (964)
+..+..+++|++|+|++|.+++..+..+. .+++|++|+|++|.+++..+ ...+++|++|+|++|+|++. |..+..+
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~~~~~~l 213 (317)
T 3o53_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSA 213 (317)
T ss_dssp GBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGG
T ss_pred chhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-hhhhccc
Confidence 77888888899999999988877776664 68899999999999886532 33588999999999999865 4458999
Q ss_pred ccCCeecccCccccCCCChhcccccccceeeccCCcCC-CcccccccccccceEEEec-CCcccccCCC
Q 037111 515 VQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS-GSIPTNFENMHGLLSIDIS-YNELDGPIPS 581 (964)
Q Consensus 515 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~l~ls-~N~l~~~~~~ 581 (964)
++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..++.|+.++++ .+.++|..|.
T Consensus 214 ~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 214 AGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred CcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 99999999999998 57888999999999999999998 7788899999999999999 5567776554
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=274.89 Aligned_cols=268 Identities=25% Similarity=0.316 Sum_probs=137.3
Q ss_pred ccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEee
Q 037111 228 KLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVG 307 (964)
Q Consensus 228 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 307 (964)
+++.|++++|.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|+.|+++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 3555555555555 4444333 45555555555555 3333 3455555555555555 2333 34455555555
Q ss_pred CccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeecccc
Q 037111 308 GNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGEL 387 (964)
Q Consensus 308 ~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~ 387 (964)
+|++++.. . .+++|+.|++++|++++++. .+++|+.|+|++|++++..
T Consensus 110 ~N~l~~l~-------------------------~---~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~l~ 157 (622)
T 3g06_A 110 SNPLTHLP-------------------------A---LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLP 157 (622)
T ss_dssp SCCCCCCC-------------------------C---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCC
T ss_pred CCcCCCCC-------------------------C---CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCCcC
Confidence 55554321 1 23455555666665555332 1355666666666665432
Q ss_pred CccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccC
Q 037111 388 SSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLT 467 (964)
Q Consensus 388 ~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 467 (964)
. .+++|+.|++++|.|++ +| ..+++|+.|++++|+|++ +|.. +++|+.|++++|.++ .+|. .++
T Consensus 158 ~----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~---~~~ 221 (622)
T 3g06_A 158 A----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPA---LPS 221 (622)
T ss_dssp C----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCC---CCT
T ss_pred C----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCC---CCC
Confidence 1 23455555555555553 22 234556666666666653 3322 255666666666665 2332 135
Q ss_pred CCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeecc
Q 037111 468 DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS 547 (964)
Q Consensus 468 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 547 (964)
+|+.|+|++|.|++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|+
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 55566666665553 33 233555555666665553 332 3455555555555555 445555555555555555
Q ss_pred CCcCCCcccccccccc
Q 037111 548 HNNLSGSIPTNFENMH 563 (964)
Q Consensus 548 ~N~l~~~~~~~~~~l~ 563 (964)
+|++++.+|..|..++
T Consensus 293 ~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 293 GNPLSERTLQALREIT 308 (622)
T ss_dssp SCCCCHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHhcc
Confidence 5555555555554443
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-30 Score=310.05 Aligned_cols=421 Identities=15% Similarity=0.119 Sum_probs=206.1
Q ss_pred ccCCCCcccEEEccccccCCcc---c------------c-cCCCCCCCEEEcCCCCCCCCCCCCCC-CCCCCcEEEEecC
Q 037111 127 EIGLLTNLEVLHMFVNHLNGSI---P------------E-IGHLSSLKNLALDGNHLDGPIPVSIG-NLSSLVGLYLYNN 189 (964)
Q Consensus 127 ~~~~l~~L~~L~l~~n~l~~~~---~------------~-~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N 189 (964)
.+..+++|++|+++++.....+ | . ...+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 3456777888888776422111 1 1 12455666666666666554444443 4566666666665
Q ss_pred -CCCCC-CCccccCCCCcchhhcccccccCCcccccc----Cccccceeeccccc--cCC-CChhhhhcccccceeeccc
Q 037111 190 -SLPGS-IPSSIGNLSNLVYLFLKKNHLRGPIPSSFG----YLRKLTKLELSNNQ--LSG-SIPQEIGNLKLLTDLSLSQ 260 (964)
Q Consensus 190 -~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~~L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~L~~ 260 (964)
.++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. ++. .++..+..+++|++|+|++
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~ 220 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNR 220 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCT
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCC
Confidence 33321 222233455666666666655544333322 34455555555554 110 0111122345555555555
Q ss_pred c-ccccccCCcccCccccceeeccc-------ccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeec
Q 037111 261 N-QLRGTVPSSLSNLSSLEILHLYD-------NQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHD 332 (964)
Q Consensus 261 N-~l~~~~p~~l~~l~~L~~L~L~~-------N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~ 332 (964)
| .+++ +|..+..+++|+.|+++. |.+.+ ++..+.++++|+.|. .+.+
T Consensus 221 ~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls-----------------------~~~~ 275 (594)
T 2p1m_B 221 AVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLS-----------------------GFWD 275 (594)
T ss_dssp TSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEE-----------------------CCBT
T ss_pred CCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCccccc-----------------------CCcc
Confidence 5 3332 444445555555555322 22222 222344444444441 1111
Q ss_pred ccccccccccccCCCcCCeeecCCCccccccC-cccCCCCCCcEEEccCCeeccccCccc-cCCCccceEeecc------
Q 037111 333 NYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS-DDFGIYPNLKLFDLSYNKFYGELSSNW-WNCPQLGILKIAG------ 404 (964)
Q Consensus 333 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~-~~~~~L~~L~L~~------ 404 (964)
.. .+.++..+..+++|+.|++++|.+++... ..+..+++|+.|++++| +.+.....+ ..+++|++|++.+
T Consensus 276 ~~-~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~ 353 (594)
T 2p1m_B 276 AV-PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVM 353 (594)
T ss_dssp CC-GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCS
T ss_pred cc-hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCccccc
Confidence 11 11233333345556666666555443221 12334556666666655 332211111 2355566666532
Q ss_pred ---cccCCCCCCCC-cccccCcEEeccCCcccccCCcccc-ccCCcceeecc--c----ccccCC-----CchhhhccCC
Q 037111 405 ---NNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELA-NLTSLNDLILN--G----NQLSGG-----IPPELGLLTD 468 (964)
Q Consensus 405 ---n~i~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~L~L~--~----N~l~~~-----~~~~~~~l~~ 468 (964)
+.+++.....+ ..+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.+++. ++..+..+++
T Consensus 354 ~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~ 433 (594)
T 2p1m_B 354 EPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKD 433 (594)
T ss_dssp SCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTT
T ss_pred ccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCC
Confidence 22221111111 1256666666666666654444443 35667777776 3 444421 1122455667
Q ss_pred CCceecccCccccccCCCccc-ccccceecCCccccCccchhhh-hccccCCeecccCccccCCCCh-hcccccccceee
Q 037111 469 LGYLDLSANRFSKSIPGNMGY-LLKLHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHNLLRGEIPP-EICNLESLEKLN 545 (964)
Q Consensus 469 L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~ 545 (964)
|+.|+|++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|+.|+|++|.+++.... .+..+++|+.|+
T Consensus 434 L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 512 (594)
T 2p1m_B 434 LRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLW 512 (594)
T ss_dssp CCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEE
T ss_pred ccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEe
Confidence 77777765 555444444443 5667777777777765544444 5567777777777776543333 233466777777
Q ss_pred ccCCcCCCcccccc-cccccceEEEecCCcc
Q 037111 546 LSHNNLSGSIPTNF-ENMHGLLSIDISYNEL 575 (964)
Q Consensus 546 Ls~N~l~~~~~~~~-~~l~~L~~l~ls~N~l 575 (964)
|++|+++......+ ..++.|+...+..+.-
T Consensus 513 l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 513 MSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp EESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred eeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 77777654333334 4456666555555443
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-28 Score=285.84 Aligned_cols=186 Identities=19% Similarity=0.146 Sum_probs=132.3
Q ss_pred eecCCceeEEEE-EeCCCCeEEEEEecccc--------CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEE
Q 037111 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFT--------GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 697 lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~--------~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.+.|++|.+..+ +.-.|+.||+|.+.... ..+...++|.+|+++|+++ +|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 455666655554 23358899999986532 1233346799999999999 6999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++||+|.+++...+ +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999999999997543 35543 5889999999999999 99999999999999999999999999998877665
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p 891 (964)
......+||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 55667789999999999876 467789999999998887665444
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.6e-30 Score=306.36 Aligned_cols=457 Identities=15% Similarity=0.141 Sum_probs=230.4
Q ss_pred CceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCcccc---CCCcc------------ccCCCCcC
Q 037111 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYG---NIPSP------------IGNLTKLK 111 (964)
Q Consensus 47 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~---~~p~~------------~~~l~~L~ 111 (964)
|++|.++... ....+++.... +..+...+..+++|+.|+|+++.... ..|.. ...+++|+
T Consensus 34 ck~W~~~~~~---~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 34 CKSWYEIERW---CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp CHHHHHHHHH---HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHhhhh---hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 4479998322 22344554321 11111123457889999998875321 22221 24677888
Q ss_pred eeecccCCccCcCCcccC-CCCcccEEEcccc-ccCCc-ccc-cCCCCCCCEEEcCCCCCCCCCCCCC----CCCCCCcE
Q 037111 112 FLNLSSNHFSGKIPSEIG-LLTNLEVLHMFVN-HLNGS-IPE-IGHLSSLKNLALDGNHLDGPIPVSI----GNLSSLVG 183 (964)
Q Consensus 112 ~L~Ls~n~l~~~~p~~~~-~l~~L~~L~l~~n-~l~~~-~~~-~~~l~~L~~L~L~~n~l~~~~p~~~----~~l~~L~~ 183 (964)
+|+|++|.+++..+..+. .+++|++|+|++| .++.. ++. ...+++|++|+|++|.+++..+..+ ..+++|++
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 888888888776666665 6788888888877 44431 333 3467888888888888765443333 35567777
Q ss_pred EEEecCCCCCCCC-cc----ccCCCCcchhhcccc-cccCCccccccCccccceeeccccccCCCChhhhhcccccceee
Q 037111 184 LYLYNNSLPGSIP-SS----IGNLSNLVYLFLKKN-HLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLS 257 (964)
Q Consensus 184 L~L~~N~l~~~~p-~~----~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 257 (964)
|++++|. . .+. .. +.++++|++|+|++| .+++ ++..+..+++|++|+++.+...
T Consensus 189 L~l~~~~-~-~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~----------------- 248 (594)
T 2p1m_B 189 LNISCLA-S-EVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAE----------------- 248 (594)
T ss_dssp EECTTCC-S-CCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCC-----------------
T ss_pred EEecccC-C-cCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCc-----------------
Confidence 7777775 1 111 11 123455555555555 3332 4445555555555553322110
Q ss_pred ccccccccccCCcccCcccccee-ecccccccccCCcccccCccccEEEeeCccCcccCCcc-cccCCcceEEEeecccc
Q 037111 258 LSQNQLRGTVPSSLSNLSSLEIL-HLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQN-ICQSGSLQYFSVHDNYF 335 (964)
Q Consensus 258 L~~N~l~~~~p~~l~~l~~L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~L~~L~l~~n~l 335 (964)
++.|.+.+ ++..+.++++|+.| .+.+... +.++..+..+++|++|++++|.+++..... +..+++|+.|++++| +
T Consensus 249 ~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~ 325 (594)
T 2p1m_B 249 VRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-I 325 (594)
T ss_dssp CCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-G
T ss_pred cchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-c
Confidence 12222222 22234444444444 2222211 123333334445555555555443221111 223444555555444 2
Q ss_pred cc-cccccccCCCcCCeeecCC---------CccccccCcccC-CCCCCcEEEccCCeeccccCcccc-CCCccceEeec
Q 037111 336 IG-SLPKTLRNCTSLERVRLEK---------NQLIGNISDDFG-IYPNLKLFDLSYNKFYGELSSNWW-NCPQLGILKIA 403 (964)
Q Consensus 336 ~~-~~p~~l~~l~~L~~L~L~~---------N~l~~~~~~~~~-~l~~L~~L~Ls~N~i~~~~~~~~~-~~~~L~~L~L~ 403 (964)
.. .++.....+++|++|++.+ +.+++.....+. .+++|+.|+++.|.+++.....+. .+++|+.|+++
T Consensus 326 ~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 326 EDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred CHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 21 1222223355566665522 333332222222 245666666655555543333332 24455555554
Q ss_pred ccccCCCCCCCCcccccCcEEeccCCcccc-----cCCccccccCCcceeecccccccCCCchhhhc-cCCCCceecccC
Q 037111 404 GNNITGGIPPEIGNATQLHELDFSSNHLVG-----KVPLELANLTSLNDLILNGNQLSGGIPPELGL-LTDLGYLDLSAN 477 (964)
Q Consensus 404 ~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N 477 (964)
.+...+ .|.+++ .++..+..+++|+.|+|++ .+++..+..+.. +++|++|+|++|
T Consensus 406 ~~~~~~------------------~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~ 466 (594)
T 2p1m_B 406 IIEPKA------------------PDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFA 466 (594)
T ss_dssp ESSTTC------------------CCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred cccCCC------------------cccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCC
Confidence 110000 022221 1111244556666666655 455444444444 666777777777
Q ss_pred ccccccCCCc-ccccccceecCCccccCccchh-hhhccccCCeecccCccccCCCChhc-ccccccceeeccCCc
Q 037111 478 RFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPI-QLGKLVQLSELDLSHNLLRGEIPPEI-CNLESLEKLNLSHNN 550 (964)
Q Consensus 478 ~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~ 550 (964)
.+++..+..+ ..+++|++|+|++|.+++.... .+..+++|+.|++++|+++......+ ..++.|+...+..+.
T Consensus 467 ~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 467 GDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp CSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 7655444443 4567777777777777554443 33457778888888887753333333 345666666666553
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-27 Score=277.02 Aligned_cols=235 Identities=20% Similarity=0.217 Sum_probs=117.6
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcC
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALD 163 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~ 163 (964)
++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+| ++.+++|++|+|++|.+++.++ .++|++|+|+
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~----~~~L~~L~L~ 107 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV----GPSIETLHAA 107 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE----CTTCCEEECC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC----CCCcCEEECc
Confidence 355555555555555445555555555555555555554333 5555555555555555543332 1445555555
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCC
Q 037111 164 GNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243 (964)
Q Consensus 164 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 243 (964)
+|.+++..+. .+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..
T Consensus 108 ~N~l~~~~~~---------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 108 NNNISRVSCS---------------------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (487)
T ss_dssp SSCCCCEEEC---------------------------CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE
T ss_pred CCcCCCCCcc---------------------------ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC
Confidence 5555443332 2244455555555555444444555555555555555555444
Q ss_pred hhhhh-cccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccC
Q 037111 244 PQEIG-NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS 322 (964)
Q Consensus 244 p~~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 322 (964)
|..+. .+++|++|+|++|.|++..+ +..+++|++|+|++|++++. |..+..+++|+.|+|++|.+++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 44443 45555555555555553321 22355555555555555532 2335555555555555555553 23334444
Q ss_pred CcceEEEeeccccc-ccccccccCCCcCCeeecC
Q 037111 323 GSLQYFSVHDNYFI-GSLPKTLRNCTSLERVRLE 355 (964)
Q Consensus 323 ~~L~~L~l~~n~l~-~~~p~~l~~l~~L~~L~L~ 355 (964)
++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 44444444444443 3445555556666655554
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-27 Score=274.97 Aligned_cols=235 Identities=21% Similarity=0.230 Sum_probs=153.3
Q ss_pred ccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEc
Q 037111 299 MNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDL 378 (964)
Q Consensus 299 ~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 378 (964)
++|+.|+|++|.+++..|..+. .+++|+.|+|++|.+++..+ |..+++|+.|+|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~------------------------~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 87 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLA------------------------PFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGT------------------------TCTTCCEEECTTSCCEEEEE--CTTCTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHh------------------------CCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEe
Confidence 3566666666666655444444 44444444444444444332 444555555555
Q ss_pred cCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCC
Q 037111 379 SYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGG 458 (964)
Q Consensus 379 s~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 458 (964)
++|+|++..+ .++|+.|++++|.|++..+. .+++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++.
T Consensus 88 s~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (487)
T 3oja_A 88 NNNYVQELLV-----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (487)
T ss_dssp CSSEEEEEEE-----CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEE
T ss_pred cCCcCCCCCC-----CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCc
Confidence 5555543321 24555555555555544333 245677778888887777777777778888888888888777
Q ss_pred Cchhhh-ccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhccc
Q 037111 459 IPPELG-LLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICN 537 (964)
Q Consensus 459 ~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 537 (964)
.|..+. .+++|+.|+|++|.+++..+ +..+++|++|+|++|+|++..| .+..+++|+.|+|++|.|++ +|..+..
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred ChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 776665 67788888888888776533 3347778888888888876444 47777888888888888874 6666777
Q ss_pred ccccceeeccCCcCC-CcccccccccccceEEEec
Q 037111 538 LESLEKLNLSHNNLS-GSIPTNFENMHGLLSIDIS 571 (964)
Q Consensus 538 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~l~ls 571 (964)
+++|+.|+|++|++. +.+|..+..++.|+.++++
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 788888888888877 5666777777777776665
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-26 Score=243.10 Aligned_cols=218 Identities=23% Similarity=0.220 Sum_probs=136.3
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
.+|-...++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..++.+++|++|+|++|.+++..+. +..++
T Consensus 21 ~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (276)
T 2z62_A 21 KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLS 100 (276)
T ss_dssp SCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCT
T ss_pred ccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCc
Confidence 34544556788888888888876666788888888888888888766666677777777777777777665543 66666
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC-CCccccCCCCcchhhcccccccCCccccccCccccceeec
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS-IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLEL 234 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 234 (964)
+|++|++++|++++..+..++++++|++|++++|++++. +|..++++++|++|+|++|++++..+..|..+.+|+.|++
T Consensus 101 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l 180 (276)
T 2z62_A 101 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180 (276)
T ss_dssp TCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCE
T ss_pred cccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccce
Confidence 666676666666655555566666666666666666542 3555555555555555555555444444444444441100
Q ss_pred cccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCccc
Q 037111 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314 (964)
Q Consensus 235 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 314 (964)
.|++++|++++..+..+. ..+|+.|+|++|++++..+..+..+++|+.|++++|++++.
T Consensus 181 --------------------~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 181 --------------------SLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp --------------------EEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred --------------------eeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 566666666643333332 33566666666666655455556666666666666666644
Q ss_pred C
Q 037111 315 L 315 (964)
Q Consensus 315 ~ 315 (964)
.
T Consensus 240 c 240 (276)
T 2z62_A 240 C 240 (276)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=240.14 Aligned_cols=211 Identities=24% Similarity=0.265 Sum_probs=165.7
Q ss_pred CCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecc
Q 037111 372 NLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILN 451 (964)
Q Consensus 372 ~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 451 (964)
+|+.|++++|++++..+..+.++++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 46666666666665555566666666666666666666666677777888888888888877777778888888888888
Q ss_pred cccccCCCchhhhccCCCCceecccCccccc-cCCCcccccccceecCCccccCccchhhhhccccCC----eecccCcc
Q 037111 452 GNQLSGGIPPELGLLTDLGYLDLSANRFSKS-IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS----ELDLSHNL 526 (964)
Q Consensus 452 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N~ 526 (964)
+|.+++..+..++.+++|++|++++|.+++. +|..|..+++|++|+|++|++++..+..+..+.+|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 8888766666778888888888888888764 477888888899999999998887777888887777 89999999
Q ss_pred ccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCc
Q 037111 527 LRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIE 583 (964)
Q Consensus 527 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~ 583 (964)
+++..+..+. ..+|+.|+|++|+|++..+..|..+++|+.|++++|+++|..|...
T Consensus 189 l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 189 MNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTH
T ss_pred ccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchH
Confidence 9865555444 4589999999999998888888999999999999999999887653
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-26 Score=244.25 Aligned_cols=202 Identities=28% Similarity=0.349 Sum_probs=115.1
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLA 161 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~ 161 (964)
.+..+..+++..+.+.+. ..+..+++|+.|++++|.++ .++ .++.+++|++|++++|.+++ ++.++.+++|++|+
T Consensus 17 ~~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-ISALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-CGGGTTCTTCCEEE
T ss_pred hHHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-chhhcCCCCCCEEE
Confidence 345555666666666543 23456666777777776665 222 35566666666666666655 24556666666666
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCC
Q 037111 162 LDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241 (964)
Q Consensus 162 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 241 (964)
|++|.+++..+..++++++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|+.+++|++|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 66666665555555666666666666666665555555555556666666665555555555555555555555555554
Q ss_pred CChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 242 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
..+..++.+++|++|+|++|++++..+..+..+++|++|++++|++.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 44444555555555555555555444444455555555555555444
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=230.58 Aligned_cols=187 Identities=23% Similarity=0.244 Sum_probs=147.1
Q ss_pred CccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceec
Q 037111 395 PQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDL 474 (964)
Q Consensus 395 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 474 (964)
++++.|+|++|.+++..+..|.++++|++|+|++|+++...+..|..+++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 34555555555555555566777777777777777777655556677777888888888877666667777888888888
Q ss_pred ccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCc
Q 037111 475 SANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGS 554 (964)
Q Consensus 475 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 554 (964)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|+|++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 88888877777788888888888888888877777788888899999999988877677788889999999999999877
Q ss_pred ccccccccccceEEEecCCcccccCCC
Q 037111 555 IPTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 555 ~~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
.+..|..+++|+.|++++|++.+..+.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred CHHHhccccCCCEEEecCCCeeCCCcc
Confidence 777888899999999999998887653
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=233.10 Aligned_cols=202 Identities=25% Similarity=0.253 Sum_probs=118.3
Q ss_pred CcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEE
Q 037111 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNL 160 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L 160 (964)
+.+++++.+++++|+++ .+|..+. +++++|+|++|.|++..|..+..+++|++|+|++|.+++..+ .+.+++|++|
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L 82 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTL 82 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-CCCCCcCCEE
Confidence 34456666666666666 3555443 566677777777666556666666666666666666665433 2556666666
Q ss_pred EcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 161 ALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 161 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
+|++|+++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+|+
T Consensus 83 ~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 83 DLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp ECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred ECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 66666666 45556666666666666666666554555666666666666666666555555555555555555555555
Q ss_pred CCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
+..+..|..+++|++|+|++|+|+ .+|..+..+.+|+.|+|++|++.
T Consensus 162 ~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 444444455555555555555555 34444444445555555555443
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=232.18 Aligned_cols=211 Identities=25% Similarity=0.277 Sum_probs=189.6
Q ss_pred ccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCC
Q 037111 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSL 157 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L 157 (964)
....+++|+.|++++|.++. + +.+..+++|++|+|++|.+++ + +.++.+++|++|++++|.+++.++. ++.+++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 34567899999999999974 3 468999999999999999986 3 4789999999999999999988876 7899999
Q ss_pred CEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecccc
Q 037111 158 KNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNN 237 (964)
Q Consensus 158 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 237 (964)
++|+|++|++++..+..++++++|++|++++|++++..+..++++++|++|+|++|++++..+..|+.+++|++|+|++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 99999999999888888999999999999999999887778899999999999999999888888999999999999999
Q ss_pred ccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCcc
Q 037111 238 QLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN 300 (964)
Q Consensus 238 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 300 (964)
++++..|..+..+++|++|+|++|.+.+. +++|+.|++..|.++|.+|..++.+..
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 99988888899999999999999998754 457899999999999999988877654
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=227.01 Aligned_cols=192 Identities=29% Similarity=0.321 Sum_probs=154.4
Q ss_pred CCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC
Q 037111 45 TTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124 (964)
Q Consensus 45 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 124 (964)
.+||.|.|++|... ...+++++++++ .+|.+..++++.|+|++|.+++..|..|+++++|++|+|++|.|++..
T Consensus 2 ~~Cp~~~gC~C~~~--~~~l~~~~~~l~----~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 75 (251)
T 3m19_A 2 KTCETVTGCTCNEG--KKEVDCQGKSLD----SVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS 75 (251)
T ss_dssp --CHHHHSSEEEGG--GTEEECTTCCCS----SCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred ccCCCCCceEcCCC--CeEEecCCCCcc----ccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC
Confidence 36889999999632 235677777665 445556678999999999998888888899999999999999998877
Q ss_pred CcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCC
Q 037111 125 PSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLS 203 (964)
Q Consensus 125 p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 203 (964)
|..+..+++|++|+|++|++++.++. +..+++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|++++
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 155 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCc
Confidence 77788888888888888888877765 67888888888888888877666778888888888888888866666788888
Q ss_pred CcchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 204 NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 204 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
+|++|+|++|++++..+..|..+++|++|+|++|.+++.
T Consensus 156 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 888888888888877777788888888888888888754
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-24 Score=230.54 Aligned_cols=204 Identities=25% Similarity=0.250 Sum_probs=181.6
Q ss_pred cccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCC
Q 037111 103 PIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSL 181 (964)
Q Consensus 103 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 181 (964)
.++++++++.+++++|+++ .+|..+. ++|++|+|++|.+++..+. +..+++|++|+|++|++++..+ . +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcC
Confidence 4788999999999999998 6787664 7899999999999988764 8999999999999999996543 3 789999
Q ss_pred cEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecccc
Q 037111 182 VGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQN 261 (964)
Q Consensus 182 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 261 (964)
++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 77888999999999999999999888889999999999999999999887788889999999999999
Q ss_pred ccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc
Q 037111 262 QLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 262 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
+|++..+..+..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++..
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 999666667788999999999999998 678888888899999999998863
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=237.62 Aligned_cols=223 Identities=21% Similarity=0.236 Sum_probs=157.6
Q ss_pred ceeEEeccCCccccC-CCc--cccCCCCcCeeecccCCccCcCCccc--CCCCcccEEEccccccCCcccc-----cCCC
Q 037111 85 HLSYLDLNENQLYGN-IPS--PIGNLTKLKFLNLSSNHFSGKIPSEI--GLLTNLEVLHMFVNHLNGSIPE-----IGHL 154 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~-~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~l~~n~l~~~~~~-----~~~l 154 (964)
.++.|.+.++.++.. +.. .+..+++|++|+|++|.+++.+|..+ +.+++|++|+|++|.+++..+. +..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 356677777666431 111 12235668888888888888888877 8888888888888888875542 3467
Q ss_pred CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC--C--CccccCCCCcchhhcccccccCCccc----cccCc
Q 037111 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS--I--PSSIGNLSNLVYLFLKKNHLRGPIPS----SFGYL 226 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l 226 (964)
++|++|+|++|++++..|..++.+++|++|+|++|++.+. + +..++.+++|++|+|++|+++.. +. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHHHHhcC
Confidence 8888888888888877778888888888888888887642 1 22346777888888888887632 22 24667
Q ss_pred cccceeeccccccCCCChhhhhcc---cccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccE
Q 037111 227 RKLTKLELSNNQLSGSIPQEIGNL---KLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNS 303 (964)
Q Consensus 227 ~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 303 (964)
++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 778888888888877666666665 57788888888877 5666554 6777788888877743 33 566777777
Q ss_pred EEeeCccCcc
Q 037111 304 LSVGGNQFTG 313 (964)
Q Consensus 304 L~l~~N~l~~ 313 (964)
|++++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 7777777763
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.5e-24 Score=222.18 Aligned_cols=197 Identities=20% Similarity=0.167 Sum_probs=120.1
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCC-ccCcCCcccCCCCcccEEEccc-cccCCcccc-cCCCCCCC
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNH-FSGKIPSEIGLLTNLEVLHMFV-NHLNGSIPE-IGHLSSLK 158 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~~~-~~~l~~L~ 158 (964)
..++|++|+|++|++++..+..|+++++|++|+|++|. +++..+..|+.+++|++|++++ |++++..+. +..+++|+
T Consensus 29 ~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~ 108 (239)
T 2xwt_C 29 LPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLK 108 (239)
T ss_dssp CCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCC
T ss_pred CCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCC
Confidence 44578888888888887666678888888888888886 7755555677777777777776 777665543 56666677
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCc---EEEEecC-CCCCCCCccccCCCCcc-hhhcccccccCCccccccCccccceee
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLV---GLYLYNN-SLPGSIPSSIGNLSNLV-YLFLKKNHLRGPIPSSFGYLRKLTKLE 233 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~ 233 (964)
+|++++|++++ +|. ++.+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++.+.+..|.. ++|++|+
T Consensus 109 ~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~ 185 (239)
T 2xwt_C 109 FLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVY 185 (239)
T ss_dssp EEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEE
T ss_pred EEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEE
Confidence 77777766664 444 66666665 6666666 66644444566666666 6666666665333333333 4555555
Q ss_pred ccccc-cCCCChhhhhcc-cccceeeccccccccccCCcccCccccceeeccc
Q 037111 234 LSNNQ-LSGSIPQEIGNL-KLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYD 284 (964)
Q Consensus 234 L~~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 284 (964)
|++|+ +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|++++
T Consensus 186 L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARN 235 (239)
T ss_dssp CTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTT
T ss_pred cCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccC
Confidence 55553 554444445555 555555555555552 2222 334444444443
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-25 Score=255.60 Aligned_cols=185 Identities=14% Similarity=0.170 Sum_probs=146.3
Q ss_pred cccceeecCCceeEEEEEeCCCCeEEEEEeccccCc------hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 692 DESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE------TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
...+.||+|+||.||+|+. .++.+++|+....... ....+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999965 4788999986542211 11235589999999999999999666666677788999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999965 457999999999999999 9999999999999998 9999999999887543
Q ss_pred CCC-------cccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCC
Q 037111 846 SSN-------WSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPK 892 (964)
Q Consensus 846 ~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~ 892 (964)
... .....||+.|||||++.. ..|+..+|+||...-..+.+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 221 135579999999999986 56888899999999888888877665
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-25 Score=247.79 Aligned_cols=251 Identities=17% Similarity=0.199 Sum_probs=151.2
Q ss_pred EeecccccccccccccCCCcCCeeecCCCccccccC----cccCCCC-CCcEEEccCCeeccccCccccCC-----Cccc
Q 037111 329 SVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS----DDFGIYP-NLKLFDLSYNKFYGELSSNWWNC-----PQLG 398 (964)
Q Consensus 329 ~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~i~~~~~~~~~~~-----~~L~ 398 (964)
.++.|.+.+.+|..+...++|++|+|++|.+++..+ ..|..++ +|+.|+|++|++++..+..+..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 344444444444444444445555555555555444 4444455 55555555555555444444432 5566
Q ss_pred eEeecccccCCCCCCCCcc----c-ccCcEEeccCCcccccCCccccc-----cCCcceeecccccccCCCch----hhh
Q 037111 399 ILKIAGNNITGGIPPEIGN----A-TQLHELDFSSNHLVGKVPLELAN-----LTSLNDLILNGNQLSGGIPP----ELG 464 (964)
Q Consensus 399 ~L~L~~n~i~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~~~~~l~~-----l~~L~~L~L~~N~l~~~~~~----~~~ 464 (964)
+|+|++|.+++..+..+.. + ++|++|+|++|+|++..+..+.. .++|++|+|++|.+++..+. .+.
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~ 163 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILA 163 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHh
Confidence 6666666655444443332 2 67777777777776555544332 25777777777777754333 334
Q ss_pred ccC-CCCceecccCccccccCCCccc----c-cccceecCCccccCcc----chhhhhcc-ccCCeecccCccccCCCCh
Q 037111 465 LLT-DLGYLDLSANRFSKSIPGNMGY----L-LKLHYLNMSSNEFSQE----IPIQLGKL-VQLSELDLSHNLLRGEIPP 533 (964)
Q Consensus 465 ~l~-~L~~L~Ls~N~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~----~~~~~~~l-~~L~~L~Ls~N~l~~~~~~ 533 (964)
.++ +|++|+|++|++++..+..+.. + ++|++|+|++|+|++. ++..+..+ ++|+.|+|++|+|++..+.
T Consensus 164 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 243 (362)
T 3goz_A 164 AIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLE 243 (362)
T ss_dssp TSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHH
T ss_pred cCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHH
Confidence 444 7777788887777665544433 3 5788888888887653 44455553 4788888888888765442
Q ss_pred ----hcccccccceeeccCCcCCCc-------ccccccccccceEEEecCCcccccC
Q 037111 534 ----EICNLESLEKLNLSHNNLSGS-------IPTNFENMHGLLSIDISYNELDGPI 579 (964)
Q Consensus 534 ----~~~~l~~L~~L~Ls~N~l~~~-------~~~~~~~l~~L~~l~ls~N~l~~~~ 579 (964)
.+..+++|+.|+|++|.+++. ++..+..+++|+.||+++|++....
T Consensus 244 ~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 244 NLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp HHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred HHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 345667888888888875433 3346777888888888888887653
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-25 Score=248.10 Aligned_cols=266 Identities=16% Similarity=0.163 Sum_probs=131.5
Q ss_pred CceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcC--cceeEEeccCCccccCCCccccCCCCcCeeecccCCccCc-
Q 037111 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLF--SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGK- 123 (964)
Q Consensus 47 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~--~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~- 123 (964)
|..|.++.|+ ...++.++++++.+... .+..+ +.++.|++++|.+++..|. +..+++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~-~~~~~~l~l~~~~~~~~----~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASD-ESLWQTLDLTGKNLHPD----VTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTC-STTSSEEECTTCBCCHH----HHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcC-chhheeeccccccCCHH----HHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 4479999986 33456666665544311 12222 4566666666666554433 34556666666666655543
Q ss_pred CCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCC-CCCCC-CCCCCCCCCCCcEEEEecC-CCCCCCCccc
Q 037111 124 IPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGN-HLDGP-IPVSIGNLSSLVGLYLYNN-SLPGSIPSSI 199 (964)
Q Consensus 124 ~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~ 199 (964)
+|..+..+++|++|+|++|.+++..+. ++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++.
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~----- 184 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK----- 184 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH-----
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH-----
Confidence 555555555555555555555543332 444555555555555 34431 3333444455555555555 44422
Q ss_pred cCCCCcchhhcccccccCCccccccCcc-ccceeecccc--ccC-CCChhhhhcccccceeeccccc-cccccCCcccCc
Q 037111 200 GNLSNLVYLFLKKNHLRGPIPSSFGYLR-KLTKLELSNN--QLS-GSIPQEIGNLKLLTDLSLSQNQ-LRGTVPSSLSNL 274 (964)
Q Consensus 200 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l 274 (964)
.++..+..++ +|++|+|++| .++ +.+|..+..+++|++|++++|. +++..+..+..+
T Consensus 185 ------------------~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l 246 (336)
T 2ast_B 185 ------------------HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 246 (336)
T ss_dssp ------------------HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC
T ss_pred ------------------HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCC
Confidence 0233444445 5555555555 232 2334444555555555555555 444444455555
Q ss_pred cccceeeccccc-ccccCCcccccCccccEEEeeCccCcccCCcccccC-CcceEEEeecccccccccccccC
Q 037111 275 SSLEILHLYDNQ-LSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS-GSLQYFSVHDNYFIGSLPKTLRN 345 (964)
Q Consensus 275 ~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~L~~L~l~~n~l~~~~p~~l~~ 345 (964)
++|++|++++|. +.......+..+++|+.|++++| ++.. .+..+ ..+..|++++|.+++..|..+.+
T Consensus 247 ~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 247 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcccc
Confidence 555555555553 22111123455555555555555 2221 22222 22444445566666555555443
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-24 Score=243.12 Aligned_cols=261 Identities=19% Similarity=0.136 Sum_probs=158.9
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCC----ccccCCC-CcchhhcccccccCCccccccCc-----cc
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIP----SSIGNLS-NLVYLFLKKNHLRGPIPSSFGYL-----RK 228 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~ 228 (964)
.++|++|+++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|++++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788888888888777777778888888888886655 6677777 78888888888887767666665 77
Q ss_pred cceeeccccccCCCChhhhhcc-----cccceeeccccccccccCCccc----C-ccccceeecccccccccCC----cc
Q 037111 229 LTKLELSNNQLSGSIPQEIGNL-----KLLTDLSLSQNQLRGTVPSSLS----N-LSSLEILHLYDNQLSGHIP----QE 294 (964)
Q Consensus 229 L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~L~~N~l~~~~~----~~ 294 (964)
|++|+|++|++++..+..+... ++|++|+|++|++++..+..+. . .++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 8888888888877666655543 6788888888887755443332 2 2577777887777774332 33
Q ss_pred cccCc-cccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCC-CcCCeeecCCCccccccC----cccC
Q 037111 295 IGNFM-NLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNC-TSLERVRLEKNQLIGNIS----DDFG 368 (964)
Q Consensus 295 ~~~l~-~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~----~~~~ 368 (964)
+..++ +|++|+|++|++++..+..++.. +..+ ++|+.|+|++|.+++... ..+.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKF--------------------LASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHH--------------------HHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 34444 77777777777766555433322 2222 244444444444443211 1121
Q ss_pred C-CCCCcEEEccCCeeccccC----ccccCCCccceEeecccccCCC-------CCCCCcccccCcEEeccCCcccccCC
Q 037111 369 I-YPNLKLFDLSYNKFYGELS----SNWWNCPQLGILKIAGNNITGG-------IPPEIGNATQLHELDFSSNHLVGKVP 436 (964)
Q Consensus 369 ~-l~~L~~L~Ls~N~i~~~~~----~~~~~~~~L~~L~L~~n~i~~~-------~~~~~~~l~~L~~L~Ls~N~l~~~~~ 436 (964)
. .++|+.|+|++|++++... ..+..+++|+.|+|++|.+.+. ++..+..+++|++||+++|++.+..+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 2 2345555555555544322 1223444555555555553322 22355667778888888887765544
Q ss_pred ccc
Q 037111 437 LEL 439 (964)
Q Consensus 437 ~~l 439 (964)
..+
T Consensus 302 ~~~ 304 (362)
T 3goz_A 302 IPI 304 (362)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=227.38 Aligned_cols=212 Identities=25% Similarity=0.366 Sum_probs=125.3
Q ss_pred ceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCC
Q 037111 85 HLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDG 164 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~ 164 (964)
.+..+.+..+.+++.+ .+..+++|++|++++|.++ .+| .+..+++|++|++++|.+++..+ +..+++|++|+|++
T Consensus 20 ~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~ 94 (308)
T 1h6u_A 20 NAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSG 94 (308)
T ss_dssp HHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCS
T ss_pred HHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccC
Confidence 3344445555554432 2345666666666666665 344 45566666666666666665544 66666666666666
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCCh
Q 037111 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244 (964)
Q Consensus 165 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 244 (964)
|++++. +.++.+++|++|++++|++++. | .+..+++|++|+|++|++++..+ ++.+++|++|+|++|++++..+
T Consensus 95 n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 95 NPLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp CCCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred CcCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh
Confidence 666642 2466666666666666666642 3 26666666666666666665433 5666666666666666664322
Q ss_pred hhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc
Q 037111 245 QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
+..+++|+.|++++|++++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|++++
T Consensus 169 --l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 169 --LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp --GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred --hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 6666666666666666664322 566666666666666666433 25666666666666666654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-23 Score=209.30 Aligned_cols=184 Identities=26% Similarity=0.340 Sum_probs=134.0
Q ss_pred CCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCC
Q 037111 46 TPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIP 125 (964)
Q Consensus 46 ~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 125 (964)
..|.|.+|.|+..+ +..+|.+.+++|++|+|++|++++..+..|+.+++|++|+|++|++++..+
T Consensus 5 C~C~~~~v~c~~~~---------------l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (208)
T 2o6s_A 5 CSCSGTTVECYSQG---------------RTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN 69 (208)
T ss_dssp CEEETTEEECCSSC---------------CSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEECCCEEEecCCC---------------ccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccCh
Confidence 34899999997432 224455667789999999999987666778889999999999999886555
Q ss_pred cccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCC
Q 037111 126 SEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSN 204 (964)
Q Consensus 126 ~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 204 (964)
..++.+++|++|+|++|++++.++. +..+++|++|+|++|++++..+..+.++++|++|+|++|++++..+..+..+++
T Consensus 70 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 5677888888888888888776665 577777777777777777666666777777777777777777655555667777
Q ss_pred cchhhcccccccCCccccccCccccceeeccccccCCCChhhhhccc
Q 037111 205 LVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLK 251 (964)
Q Consensus 205 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 251 (964)
|++|+|++|.+.+ .+++|++|+++.|+++|.+|..++.++
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 7777777776553 344566666666666666666665544
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=228.40 Aligned_cols=201 Identities=23% Similarity=0.241 Sum_probs=174.8
Q ss_pred CcceeEEeccCCccccCCCccc--cCCCCcCeeecccCCccCcCC----cccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 83 FSHLSYLDLNENQLYGNIPSPI--GNLTKLKFLNLSSNHFSGKIP----SEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 83 ~~~L~~L~l~~n~l~~~~p~~~--~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
++.|++|+|++|.+++.+|..+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|.+++.++. ++.++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3569999999999999999988 999999999999999998666 4456899999999999999988875 89999
Q ss_pred CCCEEEcCCCCCCCC--C--CCCCCCCCCCcEEEEecCCCCCCCCc----cccCCCCcchhhcccccccCCccccccCc-
Q 037111 156 SLKNLALDGNHLDGP--I--PVSIGNLSSLVGLYLYNNSLPGSIPS----SIGNLSNLVYLFLKKNHLRGPIPSSFGYL- 226 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l- 226 (964)
+|++|+|++|++.+. + +..++.+++|++|+|++|+++ .+|. .++++++|++|+|++|++++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 999999999998752 2 234578999999999999997 3443 25788999999999999999888888777
Q ss_pred --cccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccc
Q 037111 227 --RKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289 (964)
Q Consensus 227 --~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 289 (964)
++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|+++.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 6677664 8999999999999953 44 6888999999999999974
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=213.65 Aligned_cols=183 Identities=25% Similarity=0.278 Sum_probs=149.1
Q ss_pred ccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecc
Q 037111 396 QLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLS 475 (964)
Q Consensus 396 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 475 (964)
..+.++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3455566666655 3344443 578888888888887777788888888888888888887777778888888888888
Q ss_pred cCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcc
Q 037111 476 ANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSI 555 (964)
Q Consensus 476 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 555 (964)
+|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 88888777788888888999999999988777777888899999999999998766667888999999999999999888
Q ss_pred cccccccccceEEEecCCcccccCCC
Q 037111 556 PTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 556 ~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
+..|..+++|+.|++++|+++|....
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCCccc
Confidence 88888999999999999999887544
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-25 Score=252.65 Aligned_cols=244 Identities=20% Similarity=0.274 Sum_probs=134.4
Q ss_pred CCCccccCCCCcCeeecccCCccCcCC----cccCCCCcccEEEcccccc---CCcccc-c-------CCCCCCCEEEcC
Q 037111 99 NIPSPIGNLTKLKFLNLSSNHFSGKIP----SEIGLLTNLEVLHMFVNHL---NGSIPE-I-------GHLSSLKNLALD 163 (964)
Q Consensus 99 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~l~~n~l---~~~~~~-~-------~~l~~L~~L~L~ 163 (964)
.++..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+ ++.+|. + ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 466777778888888888888775533 3355666667776666433 333331 2 344555555555
Q ss_pred CCCCCC----CCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCc---------cccc
Q 037111 164 GNHLDG----PIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYL---------RKLT 230 (964)
Q Consensus 164 ~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l---------~~L~ 230 (964)
+|.+++ .+|..+..+++|++|+|++|.+++..+..+. ..+..+ ++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~--------------------~~l~~l~~~~~~~~~~~L~ 162 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIA--------------------RALQELAVNKKAKNAPPLR 162 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHH--------------------HHHHHHHHHHHHHTCCCCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHH--------------------HHHHHHhhhhhcccCCCCc
Confidence 555544 2344444445555555555544322222111 111122 6677
Q ss_pred eeeccccccC-CCCh---hhhhcccccceeeccccccc--c---ccCCcccCccccceeeccccccc----ccCCccccc
Q 037111 231 KLELSNNQLS-GSIP---QEIGNLKLLTDLSLSQNQLR--G---TVPSSLSNLSSLEILHLYDNQLS----GHIPQEIGN 297 (964)
Q Consensus 231 ~L~L~~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~--~---~~p~~l~~l~~L~~L~L~~N~l~----~~~~~~~~~ 297 (964)
+|+|++|+++ +.+| ..+..+++|++|+|++|+++ | ..|..+..+++|++|+|++|.++ +.+|..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 7777777765 3333 35556677777777777776 2 33445666777777777777775 455666677
Q ss_pred CccccEEEeeCccCccc----CCccccc--CCcceEEEeecccccc----cccccc-cCCCcCCeeecCCCccccc
Q 037111 298 FMNLNSLSVGGNQFTGF----LPQNICQ--SGSLQYFSVHDNYFIG----SLPKTL-RNCTSLERVRLEKNQLIGN 362 (964)
Q Consensus 298 l~~L~~L~l~~N~l~~~----~p~~~~~--~~~L~~L~l~~n~l~~----~~p~~l-~~l~~L~~L~L~~N~l~~~ 362 (964)
+++|+.|+|++|++++. ++..+.. +++|++|++++|.+.+ .+|..+ .++++|+.|++++|++++.
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 77777777777776654 2222211 4444455555444444 234433 3345555555555555443
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.4e-23 Score=215.61 Aligned_cols=198 Identities=18% Similarity=0.142 Sum_probs=89.1
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCC-CCCCCCccccCCCCcchhhccc-ccccCCccccccCccccceee
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNS-LPGSIPSSIGNLSNLVYLFLKK-NHLRGPIPSSFGYLRKLTKLE 233 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 233 (964)
+|++|+|++|++++..+..|+++++|++|++++|+ +++..+..|.++++|++|+|++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555554444445555555555555554 4433333444555555555554 455444444444444444444
Q ss_pred ccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccc-cccccCCcccccCcccc-EEEeeCccC
Q 037111 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN-QLSGHIPQEIGNFMNLN-SLSVGGNQF 311 (964)
Q Consensus 234 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~-~L~l~~N~l 311 (964)
+++|++++ +|. +..+++|+ .|++|++++| ++++..+..|..+++|+ .|++++|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 44444443 232 33444443 0004444444 44433333444444444 444444444
Q ss_pred cccCCcccccCCcceEEEeeccc-ccccccccccCC-CcCCeeecCCCccccccCcccCCCCCCcEEEccC
Q 037111 312 TGFLPQNICQSGSLQYFSVHDNY-FIGSLPKTLRNC-TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380 (964)
Q Consensus 312 ~~~~p~~~~~~~~L~~L~l~~n~-l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 380 (964)
+...+..+.. .+|+.|++++|. +.+..+..|.++ ++|+.|++++|++++++.. .+++|+.|++++
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~ 235 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARN 235 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTT
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccC
Confidence 4222222222 334444444442 333334444555 5555555555555544332 334445555444
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-22 Score=221.84 Aligned_cols=199 Identities=26% Similarity=0.371 Sum_probs=174.9
Q ss_pred ccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCC
Q 037111 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLK 158 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~ 158 (964)
+...+++|++|++++|.++. +| .+..+++|++|+|++|.+++ +|. ++.+++|++|+|++|.+++. +.+..+++|+
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~ 110 (308)
T 1h6u_A 36 TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV-SAIAGLQSIK 110 (308)
T ss_dssp CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC-GGGTTCTTCC
T ss_pred cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc-hhhcCCCCCC
Confidence 34568899999999999985 55 68999999999999999995 444 99999999999999999875 5799999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
+|+|++|++++. | .++.+++|++|++++|++++..+ ++.+++|++|+|++|++++..+ +..+++|++|++++|+
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 999999999964 4 39999999999999999996543 8999999999999999997544 8999999999999999
Q ss_pred cCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCc
Q 037111 239 LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQ 293 (964)
Q Consensus 239 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 293 (964)
+++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|++++ .|.
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~-~~~ 234 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN-QPV 234 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC-CCE
T ss_pred cCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec-CCe
Confidence 996544 899999999999999999654 38999999999999999984 443
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-24 Score=240.79 Aligned_cols=221 Identities=18% Similarity=0.196 Sum_probs=138.2
Q ss_pred cCeeecccCCccCcCCcccCCC--CcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCC-CCCCCCCCCCCcEEEE
Q 037111 110 LKFLNLSSNHFSGKIPSEIGLL--TNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGP-IPVSIGNLSSLVGLYL 186 (964)
Q Consensus 110 L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L 186 (964)
++.|++++|.+. |..+..+ ++++.|++++|.+++.++.+..+++|++|+|++|.+++. +|..+..+++|++|+|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 555666655554 3334444 555666666666655555555566666666666666544 5555666666666666
Q ss_pred ecCCCCCCCCccccCCCCcchhhcccc-cccCC-ccccccCccccceeecccc-ccCCC-Chhhhhccc-ccceeecccc
Q 037111 187 YNNSLPGSIPSSIGNLSNLVYLFLKKN-HLRGP-IPSSFGYLRKLTKLELSNN-QLSGS-IPQEIGNLK-LLTDLSLSQN 261 (964)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~L~~N 261 (964)
++|.+++..|..++.+++|++|+|++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|+|++|
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 666666555666666666777777766 55542 4555677777888888888 77643 466677777 8888888887
Q ss_pred --ccc-cccCCcccCccccceeeccccc-ccccCCcccccCccccEEEeeCcc-CcccCCcccccCCcceEEEeecc
Q 037111 262 --QLR-GTVPSSLSNLSSLEILHLYDNQ-LSGHIPQEIGNFMNLNSLSVGGNQ-FTGFLPQNICQSGSLQYFSVHDN 333 (964)
Q Consensus 262 --~l~-~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L~~L~l~~n 333 (964)
.++ +.+|..+..+++|++|++++|. +++..+..+..+++|+.|++++|. ++......+..+++|+.|++++|
T Consensus 206 ~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 206 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp GGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 344 3455566677777777777777 665666677777777777777774 22221123444445555555544
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-24 Score=244.86 Aligned_cols=241 Identities=20% Similarity=0.276 Sum_probs=176.0
Q ss_pred cccccCCCcCCeeecCCCccccccC----cccCCCCCCcEEEccCCee---ccccCcc-------ccCCCccceEeeccc
Q 037111 340 PKTLRNCTSLERVRLEKNQLIGNIS----DDFGIYPNLKLFDLSYNKF---YGELSSN-------WWNCPQLGILKIAGN 405 (964)
Q Consensus 340 p~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~i---~~~~~~~-------~~~~~~L~~L~L~~n 405 (964)
+..+..+++|+.|+|++|.++...+ ..+..+++|+.|+|++|.+ .+..+.. +..+++|++|+|++|
T Consensus 25 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n 104 (386)
T 2ca6_A 25 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 104 (386)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCC
Confidence 3444455555555555555554322 2244556666666665432 2222222 256677777777777
Q ss_pred ccCC----CCCCCCcccccCcEEeccCCcccccCCccccc----c---------CCcceeeccccccc-CCCc---hhhh
Q 037111 406 NITG----GIPPEIGNATQLHELDFSSNHLVGKVPLELAN----L---------TSLNDLILNGNQLS-GGIP---PELG 464 (964)
Q Consensus 406 ~i~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~----l---------~~L~~L~L~~N~l~-~~~~---~~~~ 464 (964)
.++. .++..+..+++|++|+|++|.+++..+..+.. + ++|++|+|++|.++ ..++ ..+.
T Consensus 105 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 184 (386)
T 2ca6_A 105 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 184 (386)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHH
Confidence 7765 24556777888999999999887544444433 3 89999999999997 3444 4677
Q ss_pred ccCCCCceecccCcccc-----ccCCCcccccccceecCCccccC----ccchhhhhccccCCeecccCccccCC----C
Q 037111 465 LLTDLGYLDLSANRFSK-----SIPGNMGYLLKLHYLNMSSNEFS----QEIPIQLGKLVQLSELDLSHNLLRGE----I 531 (964)
Q Consensus 465 ~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~----~ 531 (964)
.+++|++|+|++|+++. ..+..+..+++|++|+|++|.|+ ..+|..+..+++|+.|+|++|+|++. +
T Consensus 185 ~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l 264 (386)
T 2ca6_A 185 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV 264 (386)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHH
T ss_pred hCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHH
Confidence 88999999999999973 35557889999999999999996 56788899999999999999999865 4
Q ss_pred Chhcc--cccccceeeccCCcCCC----cccccc-cccccceEEEecCCcccccCC
Q 037111 532 PPEIC--NLESLEKLNLSHNNLSG----SIPTNF-ENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 532 ~~~~~--~l~~L~~L~Ls~N~l~~----~~~~~~-~~l~~L~~l~ls~N~l~~~~~ 580 (964)
+..+. .+++|+.|+|++|+|++ .+|..+ .++++|+.|++++|++++..+
T Consensus 265 ~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 265 VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 56663 38999999999999997 477777 678999999999999987654
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-22 Score=223.62 Aligned_cols=242 Identities=20% Similarity=0.175 Sum_probs=170.1
Q ss_pred ceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc-
Q 037111 48 CTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS- 126 (964)
Q Consensus 48 C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~- 126 (964)
|.|..|.|+.. + +..+|-+.++++++|+|++|+|+...+.+|.++++|++|+|++|.+.+.+|.
T Consensus 9 C~~~~v~C~~~-----------~----Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQES-----------K----VTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEEST-----------T----CCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEecCC-----------C----CCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 77888888632 2 2345656678899999999999865556789999999999999998776665
Q ss_pred ccCCCCcccE-EEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEec-CCCCCCCCccccCCC
Q 037111 127 EIGLLTNLEV-LHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYN-NSLPGSIPSSIGNLS 203 (964)
Q Consensus 127 ~~~~l~~L~~-L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~ 203 (964)
.|.++++|++ +.++.|+++...|. +..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 5778888765 56667888877665 78888888888888888877666777777788888865 566655455666654
Q ss_pred -CcchhhcccccccCCccccccCccccceeeccc-cccCCCChhhhhcccccceeeccccccccccCCcccCccccceee
Q 037111 204 -NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSN-NQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILH 281 (964)
Q Consensus 204 -~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 281 (964)
.+++|+|++|+|+.+.+..| ...+|++|++++ |.++...+..|..+++|++|+|++|+|+...+..+.++++|+.++
T Consensus 154 ~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~ 232 (350)
T 4ay9_X 154 FESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARS 232 (350)
T ss_dssp SSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTT
T ss_pred hhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhcc
Confidence 57788888888885444444 456788888864 666644445678888888888888888744444455554444444
Q ss_pred cccccccccCCcccccCccccEEEeeCc
Q 037111 282 LYDNQLSGHIPQEIGNFMNLNSLSVGGN 309 (964)
Q Consensus 282 L~~N~l~~~~~~~~~~l~~L~~L~l~~N 309 (964)
+ +.++ .+| .+..+++|+.++++++
T Consensus 233 ~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 233 T--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp C--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred C--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 3 2233 445 3566677777776654
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-23 Score=238.38 Aligned_cols=205 Identities=23% Similarity=0.319 Sum_probs=105.5
Q ss_pred eeece-EeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcc
Q 037111 49 TWSGI-SCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSE 127 (964)
Q Consensus 49 ~w~gv-~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 127 (964)
.|.|+ .|.. ++++.++|+++.+++ + |...+++|++|+|++|+|+ .+| ..+++|++|+|++|.|++ +|.
T Consensus 49 ~~~~l~~C~~-~~L~~L~Ls~n~L~~-l---p~~l~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~- 117 (571)
T 3cvr_A 49 AVSLLKECLI-NQFSELQLNRLNLSS-L---PDNLPPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE- 117 (571)
T ss_dssp HHHHHHHHHH-TTCSEEECCSSCCSC-C---CSCCCTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-
T ss_pred hhhhcccccc-CCccEEEeCCCCCCc-c---CHhHcCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-
Confidence 69999 7753 456666666666554 2 2223455666666666665 344 335556666666666654 444
Q ss_pred cCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcch
Q 037111 128 IGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVY 207 (964)
Q Consensus 128 ~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 207 (964)
++. +|++|+|++|++++. |. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|++
T Consensus 118 l~~--~L~~L~Ls~N~l~~l-p~--~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~ 184 (571)
T 3cvr_A 118 LPA--SLKHLDVDNNQLTML-PE--LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEA 184 (571)
T ss_dssp CCT--TCCEEECCSSCCSCC-CC--CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCE
T ss_pred hhc--CCCEEECCCCcCCCC-CC--cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCE
Confidence 433 555555555555552 22 34555555555555553 333 34455555555555553 333 33 44444
Q ss_pred hhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccc
Q 037111 208 LFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQL 287 (964)
Q Consensus 208 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 287 (964)
|+|++|+|+ .+|. |.. +| +.....|+.|+|++|+|+ .+|..+..+++|+.|+|++|++
T Consensus 185 L~Ls~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 185 LDVSTNLLE-SLPA-VPV--RN-----------------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp EECCSSCCS-SCCC-CC---------------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSC
T ss_pred EECcCCCCC-chhh-HHH--hh-----------------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcC
Confidence 444444444 2222 221 22 000011266666666666 4555555566666666666666
Q ss_pred cccCCcccccCc
Q 037111 288 SGHIPQEIGNFM 299 (964)
Q Consensus 288 ~~~~~~~~~~l~ 299 (964)
++.+|..+..+.
T Consensus 243 ~~~~p~~l~~l~ 254 (571)
T 3cvr_A 243 SSRIRESLSQQT 254 (571)
T ss_dssp CHHHHHHHHHHH
T ss_pred CCcCHHHHHHhh
Confidence 666666555543
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=216.41 Aligned_cols=241 Identities=19% Similarity=0.111 Sum_probs=173.7
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc--cCCCCCCCE-EEcCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKN-LALDG 164 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~--~~~l~~L~~-L~L~~ 164 (964)
.++-++++++ .+|..+ .+++++|+|++|+|+...+..|+++++|++|+|++|++.+.+|. |..+++|++ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4567788888 678766 46899999999999844445789999999999999998776663 778888765 66777
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhccc-ccccCCccccccCcc-ccceeeccccccCCC
Q 037111 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKK-NHLRGPIPSSFGYLR-KLTKLELSNNQLSGS 242 (964)
Q Consensus 165 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~ 242 (964)
|++++..|..|.++++|++|++++|++++..+..+....++..|++.+ |+++.+.+..|..+. .++.|+|++|+|+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~- 168 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE- 168 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-
Confidence 899877788889999999999999999876666677777788888865 577766666777664 68888888888884
Q ss_pred Chhhhhcccccceeeccc-cccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCccccc
Q 037111 243 IPQEIGNLKLLTDLSLSQ-NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQ 321 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 321 (964)
+|.......+|+.|++++ |.++...++.|..+++|++|+|++|+|+...+..+ .+|+.|.+.++.--..+| .+..
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP-~l~~ 244 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLP-TLEK 244 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCC-CTTT
T ss_pred CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCC-Cchh
Confidence 444444556788888874 66664444567888888888888888885444344 445555544433222334 2555
Q ss_pred CCcceEEEeeccccc
Q 037111 322 SGSLQYFSVHDNYFI 336 (964)
Q Consensus 322 ~~~L~~L~l~~n~l~ 336 (964)
+++|+.+++.++.-.
T Consensus 245 l~~L~~l~l~~~~~c 259 (350)
T 4ay9_X 245 LVALMEASLTYPSHC 259 (350)
T ss_dssp CCSCCEEECSCHHHH
T ss_pred CcChhhCcCCCCccc
Confidence 666666666655433
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.6e-21 Score=195.56 Aligned_cols=180 Identities=23% Similarity=0.219 Sum_probs=130.4
Q ss_pred eEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCC
Q 037111 87 SYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGN 165 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n 165 (964)
+.++.+++.++ .+|..+ .++|++|+|++|++++..+..++.+++|++|++++|++++.++. +..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 35677777776 456544 45888888888888866666677888888888888888876665 577788888888888
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChh
Q 037111 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQ 245 (964)
Q Consensus 166 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 245 (964)
++++..+..++++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 88766666677788888888888888766666677777777777777777766666677777777777777766543
Q ss_pred hhhcccccceeeccccccccccCCcccCccc
Q 037111 246 EIGNLKLLTDLSLSQNQLRGTVPSSLSNLSS 276 (964)
Q Consensus 246 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 276 (964)
+++|++|+++.|+++|.+|..++.++.
T Consensus 164 ----~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 ----CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCHHHHHHHHHhCCceeeccCccccC
Confidence 345677777777777777766665543
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-21 Score=226.73 Aligned_cols=188 Identities=25% Similarity=0.370 Sum_probs=121.6
Q ss_pred CcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEec
Q 037111 109 KLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYN 188 (964)
Q Consensus 109 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 188 (964)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+++. +| +.+++|++|+|++|+|++ +|. +++ +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip--~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP--ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC--CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc--cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 44455555554443 444332 445555555555542 22 334556666666666654 444 443 666666666
Q ss_pred CCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccC
Q 037111 189 NSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVP 268 (964)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 268 (964)
|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 66664 444 45666666666666665 333 45677777777777775 454 44 77888888888887 566
Q ss_pred CcccCcccc-------ceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCC
Q 037111 269 SSLSNLSSL-------EILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSG 323 (964)
Q Consensus 269 ~~l~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 323 (964)
. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++..|..+..+.
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 5 543 66 99999999999 6888888899999999999999999988887654
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=8.9e-22 Score=210.76 Aligned_cols=148 Identities=17% Similarity=0.109 Sum_probs=118.1
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCch----------------hhHHHHHHHHHHHhCCCCCceee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGET----------------THQKEFLSEIKALTGVRHRNIVK 751 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~E~~~l~~l~h~niv~ 751 (964)
...|+..+.||+|+||.||+|...+|+.||||+++...... .....+.+|+.++++++ | ++
T Consensus 89 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~ 165 (282)
T 1zar_A 89 GKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA 165 (282)
T ss_dssp TSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred CeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence 34566779999999999999988779999999986322110 13467899999999998 4 66
Q ss_pred EEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCce
Q 037111 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA 831 (964)
Q Consensus 752 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~ 831 (964)
+.+++.. +..++||||++||+|.+ +.. .....++.|++.|++|||++ +|+||||||+||+++ ++.+
T Consensus 166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~v 231 (282)
T 1zar_A 166 VPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGI 231 (282)
T ss_dssp SCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEE
T ss_pred cCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcE
Confidence 6665543 56699999999999998 521 12447999999999999999 999999999999999 9999
Q ss_pred EEeccCcccccCCCCCCccccccccccccccccc
Q 037111 832 HVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY 865 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~ 865 (964)
||+|||+|+. +..++|||++.
T Consensus 232 kl~DFG~a~~-------------~~~~~a~e~l~ 252 (282)
T 1zar_A 232 WIIDFPQSVE-------------VGEEGWREILE 252 (282)
T ss_dssp EECCCTTCEE-------------TTSTTHHHHHH
T ss_pred EEEECCCCeE-------------CCCCCHHHHHH
Confidence 9999999863 23467888764
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.8e-22 Score=240.44 Aligned_cols=216 Identities=21% Similarity=0.196 Sum_probs=86.4
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEec
Q 037111 12 AARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDL 91 (964)
Q Consensus 12 ~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l 91 (964)
+++||+++..+.....+..-.+|... .+..+.|.+++++. ++++.++|.++++... + ...++.++|
T Consensus 133 ~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~----~---~~~l~~l~L 198 (727)
T 4b8c_D 133 TKQALMEMADTLTDSKTAKKQQPTGD------STPSGTATNSAVST-PLTPKIELFANGKDEA----N---QALLQHKKL 198 (727)
T ss_dssp CCHHHHHHHHHHHHHHTTC-------------------------------------------------------------
T ss_pred chhhhhhhhhhcccccCcccCCCcCC------CCccccCCCceecC-CccceEEeeCCCCCcc----h---hhHhhcCcc
Confidence 56899999998866555555667532 24567899999975 6788899887776542 1 123455666
Q ss_pred cCCcccc---------CCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEc
Q 037111 92 NENQLYG---------NIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162 (964)
Q Consensus 92 ~~n~l~~---------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 162 (964)
+.|.|.+ ..|+.+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.++..++.++.|++|++|+|
T Consensus 199 s~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L 277 (727)
T 4b8c_D 199 SQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDL 277 (727)
T ss_dssp -----------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEEC
T ss_pred CcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeC
Confidence 6665543 23455555666666666666655 4555555555555555555555533333555555555555
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCcc-ccceeeccccccCC
Q 037111 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLR-KLTKLELSNNQLSG 241 (964)
Q Consensus 163 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~ 241 (964)
++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|++.+|..+..+. .+..|+|++|.+++
T Consensus 278 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 278 SHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp TTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 555555 44555555555555555555554 4455555555555555555555555554444332 11234455555554
Q ss_pred CCh
Q 037111 242 SIP 244 (964)
Q Consensus 242 ~~p 244 (964)
.+|
T Consensus 356 ~~p 358 (727)
T 4b8c_D 356 PLP 358 (727)
T ss_dssp CCC
T ss_pred cCc
Confidence 444
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.83 E-value=6.3e-21 Score=225.38 Aligned_cols=195 Identities=24% Similarity=0.383 Sum_probs=144.1
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLA 161 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~ 161 (964)
.+..+..+.++.+.+.+.++ +..|++|+.|+|++|.++ .+| .++.+++|++|+|++|.+++.++ +..+++|+.|+
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~ 93 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEE
T ss_pred HHHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEE
Confidence 34556667777777775433 567888888888888887 344 57788888888888888887666 77888888888
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCC
Q 037111 162 LDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241 (964)
Q Consensus 162 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 241 (964)
|++|.+++ +| .++.+++|++|+|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+|++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 88888875 33 677888888888888888753 4577777888888888887765 567777788888888888776
Q ss_pred CChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccC
Q 037111 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHI 291 (964)
Q Consensus 242 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 291 (964)
..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+..
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred chh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 555 77777788888888877743 34777777777777777777543
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-21 Score=206.87 Aligned_cols=191 Identities=25% Similarity=0.402 Sum_probs=113.3
Q ss_pred CcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEc
Q 037111 83 FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162 (964)
Q Consensus 83 ~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 162 (964)
+..+..+.+..+.+++.. .+..+++|++|++++|.++. +| .++.+++|++|++++|++++..+ +..+++|++|+|
T Consensus 23 l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l 97 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEEC
Confidence 344455556666665432 24566777777777777763 33 36666666777776666666555 666666666666
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 163 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
++|.+++ +| .++.+++|++|+|++|++++. ..+..+++|++|++++|++++. ..+..+++|++|+|++|++++.
T Consensus 98 ~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~ 171 (291)
T 1h6t_A 98 DENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 171 (291)
T ss_dssp CSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccc
Confidence 6666664 22 366666666666666666642 3455666666666666666643 3455566666666666666544
Q ss_pred ChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
.| +..+++|++|+|++|++++ ++ .+..+++|+.|++++|+++
T Consensus 172 ~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 172 VP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp GG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred hh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 33 5556666666666666653 22 2555555666666665555
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-20 Score=194.13 Aligned_cols=156 Identities=20% Similarity=0.237 Sum_probs=133.6
Q ss_pred cEEeccCCcccccCCccccccCCcceeecccccccCCCc-hhhhccCCCCceecccCccccccCCCcccccccceecCCc
Q 037111 422 HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIP-PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500 (964)
Q Consensus 422 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 500 (964)
+.+++++|.++ .+|..+. ..+++|+|++|.|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 47778888776 4555543 346788888888886644 4578888899999999999888888899999999999999
Q ss_pred cccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 501 NEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 501 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
|+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|++++|+|+|..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99998888889999999999999999998888999999999999999999998889999999999999999999998765
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.82 E-value=8e-20 Score=189.69 Aligned_cols=159 Identities=26% Similarity=0.326 Sum_probs=94.0
Q ss_pred CCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC
Q 037111 45 TTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124 (964)
Q Consensus 45 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 124 (964)
++.|.|.+|.|+..+ +..+|.+..++|++|+|++|++++..|..|..+++|++|+|++|+|++..
T Consensus 16 ~~~Cs~~~v~c~~~~---------------l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 80 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKR---------------HASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP 80 (229)
T ss_dssp TCEEETTEEECTTSC---------------CSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCEEeCCEeEccCCC---------------cCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC
Confidence 567999999997421 23445555577777777777777776777777777777777777776443
Q ss_pred CcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCC
Q 037111 125 PSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSN 204 (964)
Q Consensus 125 p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 204 (964)
+..|..+++|++|+|++|++++.++ ..|..+++|++|+|++|+|+ .+|..+..+++
T Consensus 81 ~~~~~~l~~L~~L~Ls~N~l~~l~~-----------------------~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~ 136 (229)
T 3e6j_A 81 VGVFDSLTQLTVLDLGTNQLTVLPS-----------------------AVFDRLVHLKELFMCCNKLT-ELPRGIERLTH 136 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCT-----------------------TTTTTCTTCCEEECCSSCCC-SCCTTGGGCTT
T ss_pred hhhcccCCCcCEEECCCCcCCccCh-----------------------hHhCcchhhCeEeccCCccc-ccCcccccCCC
Confidence 3445555555555555555554444 33444444444444444444 34444445555
Q ss_pred cchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 205 LVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 205 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
|++|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 137 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 137 LTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 55555555555544444455555555556665555543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-20 Score=192.28 Aligned_cols=155 Identities=20% Similarity=0.244 Sum_probs=117.7
Q ss_pred cEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCcc
Q 037111 422 HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSN 501 (964)
Q Consensus 422 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 501 (964)
+.++++++.++ .+|..+. ++|+.|+|++|.|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666665 3454443 56777777777777666667777777777777777777777777777888888888888
Q ss_pred ccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccC
Q 037111 502 EFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPI 579 (964)
Q Consensus 502 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~ 579 (964)
+|+...+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|+|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 887666666778888888888888888777778888888888888888888777777888888888888888887754
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-20 Score=199.34 Aligned_cols=174 Identities=25% Similarity=0.327 Sum_probs=155.6
Q ss_pred ccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCC
Q 037111 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLK 158 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~ 158 (964)
+...+++|+.|++++|.+++. | .+..+++|++|+|++|++++..| ++.+++|++|++++|.+++ ++.++.+++|+
T Consensus 41 ~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~ 115 (291)
T 1h6t_A 41 TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSSLKDLKKLK 115 (291)
T ss_dssp CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGGGTTCTTCC
T ss_pred chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-ChhhccCCCCC
Confidence 345688999999999999854 4 58999999999999999996544 9999999999999999987 55699999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
+|+|++|++++. +.++.+++|++|++++|++++. ..++.+++|++|+|++|++++..+ +..+++|++|+|++|.
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 999999999964 5789999999999999999965 679999999999999999998765 8999999999999999
Q ss_pred cCCCChhhhhcccccceeecccccccc
Q 037111 239 LSGSIPQEIGNLKLLTDLSLSQNQLRG 265 (964)
Q Consensus 239 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 265 (964)
+++. + .+..+++|+.|++++|+++.
T Consensus 190 i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCC-h-hhccCCCCCEEECcCCcccC
Confidence 9964 4 48999999999999999985
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.80 E-value=7e-20 Score=204.33 Aligned_cols=178 Identities=24% Similarity=0.219 Sum_probs=130.4
Q ss_pred eEeecccccCCCCCCCCcccccCcEEeccCCcccccCCcccc-ccCCcceeecccccccCCCchhhhccCCCCceecccC
Q 037111 399 ILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELA-NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSAN 477 (964)
Q Consensus 399 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 477 (964)
.++++++.++. +|..+. +.++.|+|++|+|++..+..|. .+++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45555555553 343332 3467788888888776676676 7788888888888888776777888888888888888
Q ss_pred ccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhc---ccccccceeeccCCcCCCc
Q 037111 478 RFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEI---CNLESLEKLNLSHNNLSGS 554 (964)
Q Consensus 478 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~ 554 (964)
+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 8877777778888888888888888887777788888888888888888875444444 5678888888888888876
Q ss_pred ccccccccccc--eEEEecCCcccccC
Q 037111 555 IPTNFENMHGL--LSIDISYNELDGPI 579 (964)
Q Consensus 555 ~~~~~~~l~~L--~~l~ls~N~l~~~~ 579 (964)
.+..|..++.+ +.|+|++|+|.+..
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CHHHhhhccHhhcceEEecCCCccCCc
Confidence 66777777763 77888888887653
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=214.43 Aligned_cols=185 Identities=25% Similarity=0.325 Sum_probs=161.4
Q ss_pred ccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCC
Q 037111 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLK 158 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~ 158 (964)
++..+++|+.|+|++|.+.. +| .|..|++|+.|+|++|.|++..| ++.+++|++|+|++|.+++ +|.+..+++|+
T Consensus 38 ~~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~ 112 (605)
T 1m9s_A 38 TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LSSLKDLKKLK 112 (605)
T ss_dssp CHHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CTTSTTCTTCC
T ss_pred chhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-ChhhccCCCCC
Confidence 45678899999999999985 44 69999999999999999996554 8999999999999999987 45799999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
+|+|++|++++. +.+..+++|+.|+|++|++++. ..++.+++|+.|+|++|+|++..| +..+++|+.|+|++|+
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 999999999963 5689999999999999999965 679999999999999999998776 8999999999999999
Q ss_pred cCCCChhhhhcccccceeeccccccccccCCcccCccc
Q 037111 239 LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSS 276 (964)
Q Consensus 239 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 276 (964)
|++. ..+..+++|+.|+|++|++.+.....+..+..
T Consensus 187 i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~ 222 (605)
T 1m9s_A 187 ISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVV 222 (605)
T ss_dssp CCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEE
T ss_pred CCCC--hHHccCCCCCEEEccCCcCcCCcccccccEEe
Confidence 9964 46899999999999999998654433444333
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-19 Score=184.53 Aligned_cols=155 Identities=23% Similarity=0.314 Sum_probs=105.3
Q ss_pred CceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc
Q 037111 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS 126 (964)
Q Consensus 47 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 126 (964)
.|.|..|.|.. +++ ..+|....++|+.|+|++|+|++..|..|..+++|++|+|++|.|++..|.
T Consensus 10 ~C~~~~v~c~~-----------~~l----~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~ 74 (220)
T 2v9t_B 10 TCSNNIVDCRG-----------KGL----TEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPD 74 (220)
T ss_dssp EEETTEEECTT-----------SCC----SSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTT
T ss_pred EECCCEEEcCC-----------CCc----CcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHH
Confidence 36777777753 222 234555557888888888888877667888888888888888888877777
Q ss_pred ccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCc
Q 037111 127 EIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL 205 (964)
Q Consensus 127 ~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 205 (964)
.|..+++|++|+|++|.+++.++. +..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|
T Consensus 75 ~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 154 (220)
T 2v9t_B 75 AFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 154 (220)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCC
Confidence 777777777777777777765554 4666666666666666666666666666666666666666665544455555555
Q ss_pred chhhccccccc
Q 037111 206 VYLFLKKNHLR 216 (964)
Q Consensus 206 ~~L~L~~N~l~ 216 (964)
++|+|++|.+.
T Consensus 155 ~~L~L~~N~~~ 165 (220)
T 2v9t_B 155 QTMHLAQNPFI 165 (220)
T ss_dssp CEEECCSSCEE
T ss_pred CEEEeCCCCcC
Confidence 55555555544
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-19 Score=185.24 Aligned_cols=157 Identities=25% Similarity=0.292 Sum_probs=127.1
Q ss_pred CcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCc
Q 037111 421 LHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500 (964)
Q Consensus 421 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 500 (964)
.+.++.++++++ .+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 456777777776 4555443 7788888888888877777788888888888888888766667778888888888888
Q ss_pred cccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 501 NEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 501 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|+++|..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888777777888888888888888888 678888888889999999998887777788888889999999998888765
Q ss_pred C
Q 037111 581 S 581 (964)
Q Consensus 581 ~ 581 (964)
.
T Consensus 177 ~ 177 (229)
T 3e6j_A 177 D 177 (229)
T ss_dssp G
T ss_pred h
Confidence 3
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-19 Score=199.52 Aligned_cols=117 Identities=29% Similarity=0.257 Sum_probs=76.1
Q ss_pred CCccCcCcceeEEeccCCccccCCCcccc-CCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIG-NLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHL 154 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l 154 (964)
.+|....+.++.|+|++|+|++..+..+. ++++|++|+|++|+|++..|..|..+++|++|+|++|++++.++. +..+
T Consensus 32 ~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 111 (361)
T 2xot_A 32 NVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDL 111 (361)
T ss_dssp SCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred ccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCC
Confidence 34555566677778887777776666666 777777777777777765556666666666666666666655543 5556
Q ss_pred CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCC
Q 037111 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG 193 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 193 (964)
++|++|+|++|++++..|..|.++++|++|+|++|+|++
T Consensus 112 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 150 (361)
T 2xot_A 112 QALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR 150 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred cCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe
Confidence 666666666666665555556666666666666666553
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-19 Score=184.33 Aligned_cols=150 Identities=23% Similarity=0.256 Sum_probs=77.5
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc-ccCCCCcccEEEccccccCCccc-ccCCCCCCCEEEcCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS-EIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGN 165 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~L~~n 165 (964)
.+++++|.++. +|..+. ..+++|+|++|+|++..|. .|+.+++|++|+|++|++++..+ .+..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 67777777763 565543 3456777777777654332 34555555555555555554444 2445555555555555
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 166 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 555444444445555555555555554444444444444444444444444444444444444444444444444
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.2e-20 Score=193.79 Aligned_cols=171 Identities=22% Similarity=0.337 Sum_probs=106.0
Q ss_pred cCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCE
Q 037111 80 FSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKN 159 (964)
Q Consensus 80 ~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~ 159 (964)
...+.+++.+++++|.+++. + .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++..+ ++.+++|++
T Consensus 15 d~~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~ 89 (263)
T 1xeu_A 15 DPGLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEE 89 (263)
T ss_dssp SHHHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCE
T ss_pred CHHHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCE
Confidence 33456677777777777743 3 5677777788888777777 455 56677777777777777776655 666777777
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecccccc
Q 037111 160 LALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQL 239 (964)
Q Consensus 160 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 239 (964)
|+|++|++++ +|... . ++|++|+|++|++++. +.++++++|++|+|++|++++. + .+..+++|++|+|++|++
T Consensus 90 L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 90 LSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp EECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCC
T ss_pred EECCCCccCC-cCccc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcC
Confidence 7777777764 33222 2 6666666666666642 2455666666666666666543 2 455555555555555555
Q ss_pred CCCChhhhhcccccceeeccccccc
Q 037111 240 SGSIPQEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~L~~N~l~ 264 (964)
++. ..+..+++|+.|++++|+++
T Consensus 163 ~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 163 TNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred cch--HHhccCCCCCEEeCCCCccc
Confidence 543 34555555555555555555
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.1e-21 Score=224.87 Aligned_cols=179 Identities=20% Similarity=0.185 Sum_probs=111.1
Q ss_pred CcCcceeEEeccCCccccCCCccccCCCCcCeeecccCC-------------ccCcCCcccCCCCcccEEE-ccccccCC
Q 037111 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNH-------------FSGKIPSEIGLLTNLEVLH-MFVNHLNG 146 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-------------l~~~~p~~~~~l~~L~~L~-l~~n~l~~ 146 (964)
...++|+.|+|++|.++ .+|+.|++|++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 45678889999999997 689999999999999987775 5677788888888888888 66664431
Q ss_pred ccc------ccCC--CCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCC
Q 037111 147 SIP------EIGH--LSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGP 218 (964)
Q Consensus 147 ~~~------~~~~--l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 218 (964)
... .+.. ...|+.|+|++|+|++ +|. ++++++|++|+|++|+|+ .+|..++++++|++|+|++|+|++
T Consensus 425 L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~- 500 (567)
T 1dce_A 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN- 500 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-
T ss_pred hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-
Confidence 110 0000 1235556666666654 343 555556666666666555 455555555555555555555554
Q ss_pred ccccccCccccceeeccccccCCCC-hhhhhcccccceeecccccccc
Q 037111 219 IPSSFGYLRKLTKLELSNNQLSGSI-PQEIGNLKLLTDLSLSQNQLRG 265 (964)
Q Consensus 219 ~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~ 265 (964)
+| .|+.+++|++|+|++|+|++.. |..++.+++|+.|+|++|++++
T Consensus 501 lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 501 VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 33 4555555555555555555444 5555555555555555555553
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-19 Score=191.42 Aligned_cols=177 Identities=24% Similarity=0.335 Sum_probs=141.8
Q ss_pred cCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCC
Q 037111 98 GNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGN 177 (964)
Q Consensus 98 ~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 177 (964)
...|+. .+.+++.+++++|.+++ ++ .+..+++|++|++++|.++.. +.+..+++|++|+|++|++++..| +++
T Consensus 11 ~~~pd~--~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~L~~N~i~~~~~--l~~ 83 (263)
T 1xeu_A 11 QVFPDP--GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQSL-AGMQFFTNLKELHLSHNQISDLSP--LKD 83 (263)
T ss_dssp HHCCSH--HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTT
T ss_pred HhCCCH--HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcccc-hHHhhCCCCCEEECCCCccCCChh--hcc
Confidence 344543 57888899999999984 44 578889999999999998854 478889999999999999986544 889
Q ss_pred CCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceee
Q 037111 178 LSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLS 257 (964)
Q Consensus 178 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 257 (964)
+++|++|+|++|++++ +|. +.. ++|++|+|++|++++. ..+..+++|++|+|++|++++. + .+..+++|++|+
T Consensus 84 l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~ 156 (263)
T 1xeu_A 84 LTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLD 156 (263)
T ss_dssp CSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEE
T ss_pred CCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEE
Confidence 9999999999999985 443 333 8889999999988864 3588888888888888888854 3 688888888888
Q ss_pred ccccccccccCCcccCccccceeeccccccccc
Q 037111 258 LSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGH 290 (964)
Q Consensus 258 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 290 (964)
|++|++++. ..+..+++|+.|++++|++++.
T Consensus 157 L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 157 LHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 888888855 5678888888888888888754
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-18 Score=176.66 Aligned_cols=132 Identities=18% Similarity=0.288 Sum_probs=72.6
Q ss_pred cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccc
Q 037111 151 IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT 230 (964)
Q Consensus 151 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 230 (964)
+..+++|++|++++|.++ .+..++.+++|++|++++|++++..|..++.+++|++|+|++|++++..+..++.+++|+
T Consensus 62 l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~ 139 (197)
T 4ezg_A 62 IEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVN 139 (197)
T ss_dssp GGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCC
T ss_pred HhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCC
Confidence 344444444444444333 123455555555555555555544455555555555666666665555555566666666
Q ss_pred eeeccccc-cCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 231 KLELSNNQ-LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 231 ~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
+|+|++|. ++ .+| .+..+++|++|++++|++++ ++ .+..+++|++|++++|++.
T Consensus 140 ~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 140 SIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp EEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred EEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 66666665 44 333 46666666666666666663 33 4666666666666666664
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-18 Score=172.89 Aligned_cols=155 Identities=17% Similarity=0.252 Sum_probs=132.4
Q ss_pred CcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccc
Q 037111 415 IGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLH 494 (964)
Q Consensus 415 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 494 (964)
...+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356788899999999887 455 6888899999999999775 334788899999999999999988888999999999
Q ss_pred eecCCccccCccchhhhhccccCCeecccCcc-ccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCC
Q 037111 495 YLNMSSNEFSQEIPIQLGKLVQLSELDLSHNL-LRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573 (964)
Q Consensus 495 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N 573 (964)
+|++++|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|+|++|++++ ++ .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 99999999998889999999999999999998 65 555 68999999999999999986 33 7899999999999999
Q ss_pred cccc
Q 037111 574 ELDG 577 (964)
Q Consensus 574 ~l~~ 577 (964)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 9864
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.3e-19 Score=217.57 Aligned_cols=191 Identities=21% Similarity=0.214 Sum_probs=116.0
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeee-----cccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCC
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLN-----LSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLK 158 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~-----Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~ 158 (964)
+.++.|+|.+|.+.. +|..+....+|..+. ++.|.+. ..|..+..+++|++|+|++|.+...++.+..+++|+
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~ 250 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLT 250 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCSCCCGGGGGCCSCS
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCC
Confidence 568899999999986 455443333333333 3334444 457778888999999999999886666777889999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
+|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|.
T Consensus 251 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 251 RLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp CCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSC
T ss_pred EEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCc
Confidence 9999999998 78888899999999999999998 77888999999999999999887 567778889999999999999
Q ss_pred cCCCChhhhhcccc-cceeeccccccccccCCcccCccccceeecccc
Q 037111 239 LSGSIPQEIGNLKL-LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN 285 (964)
Q Consensus 239 l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 285 (964)
|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.|
T Consensus 328 l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 328 LEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred cCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 98888888766533 234788888888877753 456666666
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-18 Score=189.95 Aligned_cols=221 Identities=12% Similarity=0.016 Sum_probs=159.7
Q ss_pred CCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccc----cCCCCCCCCcccccC
Q 037111 346 CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNN----ITGGIPPEIGNATQL 421 (964)
Q Consensus 346 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~----i~~~~~~~~~~l~~L 421 (964)
|++|+.|+|.+ .++.+...+|..+++|+.|++++|.+..+...+|.++.++..+.+..+. .......+|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 78888888877 7777777788888888888888887777777777777776666655432 222334455556666
Q ss_pred c-EEeccCCcc-cccCCccccccCCcceeecccccccCCCchhh-hccCCCCceecccCccccccCCCcccccccceecC
Q 037111 422 H-ELDFSSNHL-VGKVPLELANLTSLNDLILNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNM 498 (964)
Q Consensus 422 ~-~L~Ls~N~l-~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 498 (964)
+ .+++....- .......-....++..+.+.++-.. .....+ ..+++|+.|+|++|+++.+.+.+|.++.+|+.|+|
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 5 444443221 1001111113456667777665322 111222 24789999999999998888888999999999999
Q ss_pred CccccCccchhhhhccccCC-eecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEe
Q 037111 499 SSNEFSQEIPIQLGKLVQLS-ELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDI 570 (964)
Q Consensus 499 s~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l 570 (964)
++| ++.+.+.+|..+.+|+ .|++.+ .++...+.+|.++++|+.|+|++|+++...+.+|.++++|+.++.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 998 8777788999999999 999998 777677889999999999999999999888889999999998864
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-18 Score=173.47 Aligned_cols=131 Identities=24% Similarity=0.308 Sum_probs=83.8
Q ss_pred cEEeccCCcccccCCccccccCCcceeecccccccCCCch-hhhccCCCCceecccCccccccCCCcccccccceecCCc
Q 037111 422 HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPP-ELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500 (964)
Q Consensus 422 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 500 (964)
+.+++++|+++ .+|..+.. +|++|+|++|.|++..+. .+..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67777777775 45554432 677777777777655443 366666666666666666666666666666666666666
Q ss_pred cccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcc
Q 037111 501 NEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSI 555 (964)
Q Consensus 501 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 555 (964)
|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 6666655555666666666666666666655666666666666666666666543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.4e-19 Score=210.70 Aligned_cols=203 Identities=17% Similarity=0.156 Sum_probs=102.3
Q ss_pred CCCCcchhhcccccccCCccccccCccccceeeccccc-------------cCCCChhhhhcccccceee-ccccccccc
Q 037111 201 NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ-------------LSGSIPQEIGNLKLLTDLS-LSQNQLRGT 266 (964)
Q Consensus 201 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~ 266 (964)
.+++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--- 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--- 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH---
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc---
Confidence 3444555555555554 345555555555555554443 3445566666666666666 555543
Q ss_pred cCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCC
Q 037111 267 VPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNC 346 (964)
Q Consensus 267 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l 346 (964)
.+|+.+.+++|.++...+ ..|+.|+|++|.|++. |. +..+++|+.|++++|.+. .+|..+.++
T Consensus 423 --------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred --------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 234445555555553211 1355666666666542 32 444444444444444444 334444444
Q ss_pred CcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCC-CCCCcccccCcEEe
Q 037111 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGI-PPEIGNATQLHELD 425 (964)
Q Consensus 347 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~ 425 (964)
++|+.|+|++|.|++++ .+ ..+++|+.|+|++|.|++.. |..+..+++|+.|+
T Consensus 486 ~~L~~L~Ls~N~l~~lp--~l------------------------~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 486 RCLEVLQASDNALENVD--GV------------------------ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCCCCG--GG------------------------TTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred CCCCEEECCCCCCCCCc--cc------------------------CCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 44444444444444421 33 34444444444444444444 55666666666667
Q ss_pred ccCCcccccCCcc---ccccCCcceeec
Q 037111 426 FSSNHLVGKVPLE---LANLTSLNDLIL 450 (964)
Q Consensus 426 Ls~N~l~~~~~~~---l~~l~~L~~L~L 450 (964)
|++|++++.+|.. +..+++|+.|++
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 7777666543322 223566666653
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-18 Score=190.55 Aligned_cols=103 Identities=13% Similarity=0.027 Sum_probs=77.5
Q ss_pred CCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccc-eEeecccccCCCCCCCCcccccCcEE
Q 037111 346 CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLG-ILKIAGNNITGGIPPEIGNATQLHEL 424 (964)
Q Consensus 346 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~-~L~L~~n~i~~~~~~~~~~l~~L~~L 424 (964)
+++|+.++|++|.++.+....|..+.+|+.|+|.+| +..+...+|.+|.+|+ .+.+.+ .++.+.+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 567777777777777777777777777777777776 6666677777777777 777777 6666667778888888888
Q ss_pred eccCCcccccCCccccccCCcceeec
Q 037111 425 DFSSNHLVGKVPLELANLTSLNDLIL 450 (964)
Q Consensus 425 ~Ls~N~l~~~~~~~l~~l~~L~~L~L 450 (964)
++++|+++...+..|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 88888887777777888888877753
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.72 E-value=8.8e-18 Score=169.08 Aligned_cols=129 Identities=25% Similarity=0.270 Sum_probs=65.8
Q ss_pred ceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCc-cccccCCcceeecccccccCCCchhhhccCCCCceeccc
Q 037111 398 GILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPL-ELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSA 476 (964)
Q Consensus 398 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 476 (964)
+.+++++|.++ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 34555555554 23333222 455555555555443332 245555555555555555555455555555555555555
Q ss_pred CccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccC
Q 037111 477 NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG 529 (964)
Q Consensus 477 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 529 (964)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 55555555555555555555555555555555555555555555555555543
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-17 Score=176.47 Aligned_cols=139 Identities=19% Similarity=0.198 Sum_probs=107.6
Q ss_pred cccccceeecCCceeEEEEEe-CCCCe--EEEEEeccccCc----------------------hhhHHHHHHHHHHHhCC
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDT--VAVKKLHSFTGE----------------------TTHQKEFLSEIKALTGV 744 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~----------------------~~~~~~~~~E~~~l~~l 744 (964)
-|++.+.||+|+||.||+|.. .+|+. ||||+++..... ......+.+|+..++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367788999999999999987 67888 999987532111 01123678899999999
Q ss_pred CCCce--eeEEeeeecCceeEEEEEeccC-C----CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEec
Q 037111 745 RHRNI--VKFYGFCSHARHSFLVYEYLER-G----SLARILSSETATEMDWSKRVNVIKGVAHALSYMH-HECRPPIVHR 816 (964)
Q Consensus 745 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~iiH~ 816 (964)
.|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. +|+||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHr 195 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHA 195 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 88754 344442 356899999943 4 77776532 123456789999999999999 88 99999
Q ss_pred cCCCCCeEECCCCceEEeccCccccc
Q 037111 817 DVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 817 dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
||||+|||++. .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999754
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.8e-17 Score=162.49 Aligned_cols=111 Identities=28% Similarity=0.326 Sum_probs=66.2
Q ss_pred CCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeecc
Q 037111 468 DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS 547 (964)
Q Consensus 468 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 547 (964)
+|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 3444444444443 333445555555555555555555555556666666666666666665555566666666666666
Q ss_pred CCcCCCcccccccccccceEEEecCCcccccC
Q 037111 548 HNNLSGSIPTNFENMHGLLSIDISYNELDGPI 579 (964)
Q Consensus 548 ~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~ 579 (964)
+|+|++..+..|..+++|+.|++++|+|.|..
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 66666555556666777777777777776643
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.66 E-value=7.2e-17 Score=158.75 Aligned_cols=43 Identities=21% Similarity=0.111 Sum_probs=20.1
Q ss_pred cccCccccceeeccccccCCCCh---hhhhcccccceeeccccccc
Q 037111 222 SFGYLRKLTKLELSNNQLSGSIP---QEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 222 ~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 264 (964)
.+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 115 ~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 115 PLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp GGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred HHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 34444444444444444443322 24444555555555555544
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-16 Score=155.77 Aligned_cols=133 Identities=26% Similarity=0.274 Sum_probs=100.8
Q ss_pred CCCCCEEEcCCCCCC-CCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCcccccee
Q 037111 154 LSSLKNLALDGNHLD-GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232 (964)
Q Consensus 154 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 232 (964)
.++|++|+|++|+++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367888888888887 67777788888888888888888755 667777888888888888877677777777888888
Q ss_pred eccccccCCCC-hhhhhcccccceeeccccccccccC---CcccCccccceeeccccccc
Q 037111 233 ELSNNQLSGSI-PQEIGNLKLLTDLSLSQNQLRGTVP---SSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 233 ~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~N~l~ 288 (964)
+|++|++++.. +..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888887532 2677777888888888888875433 36777777888888777776
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.6e-16 Score=153.78 Aligned_cols=133 Identities=30% Similarity=0.375 Sum_probs=93.8
Q ss_pred CceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc
Q 037111 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS 126 (964)
Q Consensus 47 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 126 (964)
.|.|.++.|+..+ +..+|...+++|++|++++|++++..+..|+.+++|++|+|++|.+++..+.
T Consensus 6 ~C~~~~l~~~~~~---------------l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 6 SCSGTEIRCNSKG---------------LTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EEETTEEECCSSC---------------CSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EeCCCEEEecCCC---------------CccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 4889999997422 2234555567888888888888876666778888888888888888865555
Q ss_pred ccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC
Q 037111 127 EIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194 (964)
Q Consensus 127 ~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 194 (964)
.++.+++|++|++++|++++.++. +..+++|++|+|++|++++..+..+..+++|++|+|++|.+.+.
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 567777777777777777766654 56667777777777777655554556666677777776666643
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.5e-15 Score=168.72 Aligned_cols=219 Identities=12% Similarity=0.089 Sum_probs=132.9
Q ss_pred CCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccC
Q 037111 349 LERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSS 428 (964)
Q Consensus 349 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 428 (964)
|+.+.+.. .++.+....|..+++|+.++++.|+++.+....|. +.+|+.+.|..+ ++.+...+|.++++|+.+++..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 44444443 44444444555555555555555555444444444 345555555422 4444455555555566666654
Q ss_pred CcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccc-----cccCCCcccccccceecCCcccc
Q 037111 429 NHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS-----KSIPGNMGYLLKLHYLNMSSNEF 503 (964)
Q Consensus 429 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l 503 (964)
| ++.....+|.+ .+|+.+.| .+.++.....+|..+++|+.+++.+|.+. ...+.+|.++++|+.++|. |.+
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i 311 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESI 311 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cce
Confidence 3 34344455555 55666666 33344444556666666666666665553 4556677788888888887 447
Q ss_pred CccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccc-cceEEEecCCccc
Q 037111 504 SQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMH-GLLSIDISYNELD 576 (964)
Q Consensus 504 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~l~ls~N~l~ 576 (964)
+.+...+|..+.+|+.++|..| ++...+.+|.++ +|+.|++++|.+....+..|..++ .++.|.+..|.+.
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 6666777888888888888555 665666778887 888888888887766677777774 6777777766543
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1e-16 Score=154.17 Aligned_cols=58 Identities=24% Similarity=0.179 Sum_probs=25.1
Q ss_pred CCCcchhhcccccccCC-ccccccCccccceeeccccccCCCCh---hhhhcccccceeecc
Q 037111 202 LSNLVYLFLKKNHLRGP-IPSSFGYLRKLTKLELSNNQLSGSIP---QEIGNLKLLTDLSLS 259 (964)
Q Consensus 202 l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~ 259 (964)
+++|++|++++|++++. .+..++.+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 87 l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 87 CPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 33333333434433331 12344444445555555554443333 344455555555543
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.8e-16 Score=153.63 Aligned_cols=133 Identities=23% Similarity=0.281 Sum_probs=85.7
Q ss_pred ceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCc
Q 037111 446 NDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHN 525 (964)
Q Consensus 446 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 525 (964)
+.+++++|+++ .+|..+ .++|+.|++++|++++..+..|..+++|++|++++|+|++..+..|+.+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34444444444 223221 245566666666666555555666666677777777766555556677777777777777
Q ss_pred cccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCC
Q 037111 526 LLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 526 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+++|.+|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 77765555667777777777777777766666667777777777777777776653
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3.5e-15 Score=167.55 Aligned_cols=219 Identities=12% Similarity=0.116 Sum_probs=164.6
Q ss_pred ceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecc
Q 037111 325 LQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAG 404 (964)
Q Consensus 325 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~ 404 (964)
|+.+.+.+ .+..+.+.+|.+|.+|+.+++.+|.++.+....|. ..+|+.+.|..+ +..+...+|.+|++|+.+.+..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 44444443 33444556677777777777777777777777776 467777777644 6666677777777888887776
Q ss_pred cccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeeccccccc-----CCCchhhhccCCCCceecccCcc
Q 037111 405 NNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS-----GGIPPELGLLTDLGYLDLSANRF 479 (964)
Q Consensus 405 n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l 479 (964)
| ++.+...+|.+ .+|+.++| .+.++......|.++++|+.+.+.+|.+. ...+.+|..+++|+.++|. +.+
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i 311 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESI 311 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cce
Confidence 4 55556667776 67888888 45566667778888888888888887764 4566788889999999998 457
Q ss_pred ccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhccccc-ccceeeccCCcCC
Q 037111 480 SKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLE-SLEKLNLSHNNLS 552 (964)
Q Consensus 480 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 552 (964)
+.....+|.++++|+.|+|..| ++.+...+|..+ +|+.|++++|.+....+..|.+++ +++.|++..|.+.
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 7778888999999999999665 776778889998 999999999998877777788874 7889998887654
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.6e-16 Score=151.26 Aligned_cols=128 Identities=23% Similarity=0.255 Sum_probs=90.4
Q ss_pred CCCCCEEEcCCCCCC-CCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCcccccee
Q 037111 154 LSSLKNLALDGNHLD-GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232 (964)
Q Consensus 154 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 232 (964)
.++|++|++++|.++ +.+|..++.+++|++|++++|.+++. ..++++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 357788888888887 67777778888888888888888755 567777777777777777776666666667777777
Q ss_pred eccccccCCC-ChhhhhcccccceeeccccccccccC---CcccCccccceeecc
Q 037111 233 ELSNNQLSGS-IPQEIGNLKLLTDLSLSQNQLRGTVP---SSLSNLSSLEILHLY 283 (964)
Q Consensus 233 ~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~ 283 (964)
++++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777777642 23566667777777777777764433 356666666666665
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.3e-15 Score=152.99 Aligned_cols=126 Identities=24% Similarity=0.338 Sum_probs=62.9
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHL 167 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l 167 (964)
.+++++|+++ .+|..+. ++|++|+|++|.|+ .+|..+..+++|++|+| ++|++
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~L-----------------------s~N~i 66 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDL-----------------------SNNRI 66 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEEC-----------------------CSSCC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEEC-----------------------CCCcC
Confidence 5666666665 3454432 45666666666655 44544444444444444 44444
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 168 DGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 168 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 67 ~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 67 STLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 4444444444444444444444444444444444444444444444444444444445555555555555554
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4.8e-16 Score=169.82 Aligned_cols=139 Identities=10% Similarity=0.097 Sum_probs=99.6
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCc------------hhhH--------HHHHHHHHHHhCCCCCce
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE------------TTHQ--------KEFLSEIKALTGVRHRNI 749 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~~~~--------~~~~~E~~~l~~l~h~ni 749 (964)
-|++...||+|+||.||+|..++|+.||||+++..... .... .....|...+.++.+..+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38899999999999999999999999999987532100 0001 112345555665544333
Q ss_pred e--eEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC
Q 037111 750 V--KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 750 v--~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~ 827 (964)
. ..+++ ...++||||++|++|.++... .....++.|++.++.|||++ +||||||||.|||+++
T Consensus 176 ~vp~p~~~----~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 176 PVPEPIAQ----SRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp SCCCEEEE----ETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCeeeec----cCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 2 22222 123799999999888765421 12356889999999999999 9999999999999988
Q ss_pred CC----------ceEEeccCcccccC
Q 037111 828 EY----------EAHVSDFGTAKLLK 843 (964)
Q Consensus 828 ~~----------~~kl~Dfg~a~~~~ 843 (964)
++ .+.|+||+-+....
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCcccccccccceEEEEeCCcccCC
Confidence 76 38999999775543
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.57 E-value=5.6e-17 Score=164.19 Aligned_cols=152 Identities=24% Similarity=0.278 Sum_probs=95.3
Q ss_pred ccCcEEeccCCcccccCCc------cccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccc
Q 037111 419 TQLHELDFSSNHLVGKVPL------ELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLK 492 (964)
Q Consensus 419 ~~L~~L~Ls~N~l~~~~~~------~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 492 (964)
..++.++++.+.+.+..|. .+..+++|++|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3444455555555544443 56666666777777666664 44 6666667777777777665 45555556667
Q ss_pred cceecCCccccCccchhhhhccccCCeecccCccccCCCC-hhcccccccceeeccCCcCCCccccc----------ccc
Q 037111 493 LHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIP-PEICNLESLEKLNLSHNNLSGSIPTN----------FEN 561 (964)
Q Consensus 493 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~----------~~~ 561 (964)
|++|+|++|+|++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|++++.+|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 7777777777764 33 46667777777777777764222 35667777777777777776655543 666
Q ss_pred cccceEEEecCCcccc
Q 037111 562 MHGLLSIDISYNELDG 577 (964)
Q Consensus 562 l~~L~~l~ls~N~l~~ 577 (964)
+++|+.|| +|+++.
T Consensus 173 l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 173 LPNLKKLD--GMPVDV 186 (198)
T ss_dssp CSSCSEEC--CGGGTT
T ss_pred CCCcEEEC--CcccCH
Confidence 77777765 555543
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.57 E-value=4.8e-14 Score=159.08 Aligned_cols=330 Identities=13% Similarity=0.060 Sum_probs=184.1
Q ss_pred CccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCcc
Q 037111 196 PSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLS 275 (964)
Q Consensus 196 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 275 (964)
..+|.++++|+.+.|..+ ++.+...+|.++++|+.+++.++ ++.....+|.++.+|+.+.+..+ +......+|.++.
T Consensus 64 ~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 345666666666666532 55444555666666666666543 33233345555555555554433 2223333344433
Q ss_pred ccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecC
Q 037111 276 SLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355 (964)
Q Consensus 276 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 355 (964)
.++........ .....+|.++.+|+.+.+.. + +.......|.++.+|+.+.+.
T Consensus 141 ~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~~------------------------~-~~~I~~~~F~~c~~L~~i~l~ 193 (394)
T 4fs7_A 141 FKEITIPEGVT--VIGDEAFATCESLEYVSLPD------------------------S-METLHNGLFSGCGKLKSIKLP 193 (394)
T ss_dssp CSEEECCTTCC--EECTTTTTTCTTCCEEECCT------------------------T-CCEECTTTTTTCTTCCBCCCC
T ss_pred ccccccCcccc--ccchhhhcccCCCcEEecCC------------------------c-cceeccccccCCCCceEEEcC
Confidence 22222211111 11223344444444444433 2 122334556666666666666
Q ss_pred CCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccC
Q 037111 356 KNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKV 435 (964)
Q Consensus 356 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 435 (964)
.| ++.+....|.....|+.+.+..+... ....+.....|+.+.+..+ ++......+..+..|+.+.+..+... ..
T Consensus 194 ~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~ 268 (394)
T 4fs7_A 194 RN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IG 268 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-EC
T ss_pred CC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-ee
Confidence 55 55555666666666666666554322 1122334456666666433 23344456666777777777666443 55
Q ss_pred CccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccc
Q 037111 436 PLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLV 515 (964)
Q Consensus 436 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 515 (964)
...|..+..++.+.+..+.+. ...|..+.+|+.+.+..+ ++.+...+|.++.+|+.+++.++ ++.+...+|.++.
T Consensus 269 ~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~ 343 (394)
T 4fs7_A 269 GSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCT 343 (394)
T ss_dssp SCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCT
T ss_pred ccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCC
Confidence 566777777777776665433 235666777777777654 55556667777777777777644 6555566777777
Q ss_pred cCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEE
Q 037111 516 QLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSI 568 (964)
Q Consensus 516 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 568 (964)
+|+.+++..| ++.....+|.++++|+.+++..| ++ .+..+|.+.++|+.+
T Consensus 344 ~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 344 SLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 7777777766 55555667777777777777654 33 344567777776654
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.55 E-value=3.3e-15 Score=147.97 Aligned_cols=133 Identities=23% Similarity=0.236 Sum_probs=82.6
Q ss_pred ccccCCcceeecccccccCCCchhhhcc-CCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccC
Q 037111 439 LANLTSLNDLILNGNQLSGGIPPELGLL-TDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQL 517 (964)
Q Consensus 439 l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 517 (964)
+.++++|+.|+|++|.++. +|. +..+ ++|++|+|++|.+++. ..|..+++|++|+|++|+|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 3444555555555555552 232 3333 3666666666666543 456666777777777777765544555677777
Q ss_pred CeecccCccccCCCCh--hcccccccceeeccCCcCCCcccc----cccccccceEEEecCCcccc
Q 037111 518 SELDLSHNLLRGEIPP--EICNLESLEKLNLSHNNLSGSIPT----NFENMHGLLSIDISYNELDG 577 (964)
Q Consensus 518 ~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~l~ls~N~l~~ 577 (964)
+.|+|++|+|+ .+|. .+..+++|+.|+|++|+++ .+|. .+..+++|+.||+++|....
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 77777777775 3444 5667777777777777776 3444 36777777777777776654
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-13 Score=155.94 Aligned_cols=236 Identities=13% Similarity=0.097 Sum_probs=101.5
Q ss_pred hhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcc
Q 037111 246 EIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSL 325 (964)
Q Consensus 246 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L 325 (964)
+|.++++|+.+.+..+..+ .....|.++.+|+.+++..| ++......|.++..|+.+.+..+... +.........|
T Consensus 157 aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l 232 (394)
T 4fs7_A 157 AFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGV 232 (394)
T ss_dssp TTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCC
T ss_pred hhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCC
Confidence 4444455555554433221 23334444455555555443 22233344444444444444333221 01111122333
Q ss_pred eEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeeccc
Q 037111 326 QYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGN 405 (964)
Q Consensus 326 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n 405 (964)
+.+.+.+. +.......+.++..|+.+.+..+. ..+....|.....++.+....+.+. ...|..+.+|+.+.
T Consensus 233 ~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~-~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~---- 303 (394)
T 4fs7_A 233 KNIIIPDS-FTELGKSVFYGCTDLESISIQNNK-LRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVK---- 303 (394)
T ss_dssp CEEEECTT-CCEECSSTTTTCSSCCEEEECCTT-CEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEE----
T ss_pred ceEEECCC-ceecccccccccccceeEEcCCCc-ceeeccccccccccceeccCceeec---cccccccccccccc----
Confidence 33333221 122233445555555555555442 2344445555555555555444322 22334444444444
Q ss_pred ccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCC
Q 037111 406 NITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPG 485 (964)
Q Consensus 406 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 485 (964)
+..+ ++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+++..| ++.....
T Consensus 304 --------------------l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 360 (394)
T 4fs7_A 304 --------------------LLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGAN 360 (394)
T ss_dssp --------------------ECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred --------------------cccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHH
Confidence 4332 33233344444445555544322 33333444555555555555444 4444455
Q ss_pred CcccccccceecCCccccCccchhhhhccccCCe
Q 037111 486 NMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSE 519 (964)
Q Consensus 486 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 519 (964)
+|.++.+|+.+++..+ ++ .+..+|.+.++|+.
T Consensus 361 aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 361 AFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp TBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred HhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 5555556666655443 21 22344555555544
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-16 Score=160.22 Aligned_cols=153 Identities=22% Similarity=0.251 Sum_probs=122.5
Q ss_pred CCccceEeecccccCCCCCC------CCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccC
Q 037111 394 CPQLGILKIAGNNITGGIPP------EIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLT 467 (964)
Q Consensus 394 ~~~L~~L~L~~n~i~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 467 (964)
...++.++++.+.+++..|. .+..+++|++|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34445555555555555554 77888899999999999986 56 8888999999999999998 6777888889
Q ss_pred CCCceecccCccccccCCCcccccccceecCCccccCccch-hhhhccccCCeecccCccccCCCChh----------cc
Q 037111 468 DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIP-IQLGKLVQLSELDLSHNLLRGEIPPE----------IC 536 (964)
Q Consensus 468 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~----------~~ 536 (964)
+|++|+|++|++++. | .+..+++|++|++++|+|++..+ ..+..+++|+.|++++|.+++.+|.. +.
T Consensus 94 ~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 999999999999863 4 58889999999999999986443 57889999999999999998765542 78
Q ss_pred cccccceeeccCCcCCC
Q 037111 537 NLESLEKLNLSHNNLSG 553 (964)
Q Consensus 537 ~l~~L~~L~Ls~N~l~~ 553 (964)
.+++|+.|| +|.++.
T Consensus 172 ~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 172 RLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HCSSCSEEC--CGGGTT
T ss_pred hCCCcEEEC--CcccCH
Confidence 899999887 777764
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.54 E-value=3.1e-15 Score=148.13 Aligned_cols=134 Identities=20% Similarity=0.209 Sum_probs=60.9
Q ss_pred ccCCCCcCeeecccCCccCcCCcccCCCC-cccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCc
Q 037111 104 IGNLTKLKFLNLSSNHFSGKIPSEIGLLT-NLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLV 182 (964)
Q Consensus 104 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 182 (964)
+.++++|++|+|++|+++ .+|. +..+. +|++|++++|.+++. +.++.+++|++|+|++|++++..|..++.+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 444555555555555555 2332 22222 444444444444432 3344444444444444444432222224444444
Q ss_pred EEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChh----hhhcccccceeec
Q 037111 183 GLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQ----EIGNLKLLTDLSL 258 (964)
Q Consensus 183 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L 258 (964)
+|+|++|+++ .+|. ...+..+++|++|++++|.++ .+|. .+..+++|+.|++
T Consensus 92 ~L~L~~N~i~-~~~~----------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 92 ELILTNNSLV-ELGD----------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp EEECCSCCCC-CGGG----------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred EEECCCCcCC-cchh----------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 4444444443 2222 014445555555555555555 2333 2555666666666
Q ss_pred cccccc
Q 037111 259 SQNQLR 264 (964)
Q Consensus 259 ~~N~l~ 264 (964)
+.|.+.
T Consensus 148 ~~n~~~ 153 (176)
T 1a9n_A 148 QKVKLK 153 (176)
T ss_dssp EECCHH
T ss_pred CcCCHH
Confidence 666554
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.48 E-value=4.8e-14 Score=138.45 Aligned_cols=110 Identities=24% Similarity=0.280 Sum_probs=80.7
Q ss_pred CCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccC
Q 037111 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSH 548 (964)
Q Consensus 469 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 548 (964)
.+.|++++|.++. +|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3456666666653 444442 6677777777777777777777788888888888888766666677788888888888
Q ss_pred CcCCCcccccccccccceEEEecCCcccccCCC
Q 037111 549 NNLSGSIPTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 549 N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
|+|++..+..|..+++|+.|+|++|+|++..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 888877677788888888888888888877653
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-13 Score=135.78 Aligned_cols=108 Identities=22% Similarity=0.285 Sum_probs=66.6
Q ss_pred CceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCC
Q 037111 470 GYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHN 549 (964)
Q Consensus 470 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 549 (964)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+.+++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 34555555553 3444332 55666666666666655666666666666666666666544445566666777777777
Q ss_pred cCCCcccccccccccceEEEecCCcccccCC
Q 037111 550 NLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 550 ~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
+|++..+..|..+++|+.|+|++|+|.+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 6665555556666777777777777666544
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.42 E-value=4.7e-13 Score=131.34 Aligned_cols=86 Identities=28% Similarity=0.299 Sum_probs=45.1
Q ss_pred CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeec
Q 037111 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLEL 234 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 234 (964)
++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 34555555555555444555555555555555555555444444455555555555555555444444555555555555
Q ss_pred cccccC
Q 037111 235 SNNQLS 240 (964)
Q Consensus 235 ~~N~l~ 240 (964)
++|.++
T Consensus 110 ~~N~~~ 115 (170)
T 3g39_A 110 LNNPWD 115 (170)
T ss_dssp CSSCBC
T ss_pred CCCCCC
Confidence 555554
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.2e-13 Score=131.50 Aligned_cols=85 Identities=28% Similarity=0.367 Sum_probs=39.9
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecc
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 235 (964)
+|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 34 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~ 113 (174)
T 2r9u_A 34 DKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLY 113 (174)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeC
Confidence 44444444444444444444444445555555554443333334444444444444444444333344444555555555
Q ss_pred ccccC
Q 037111 236 NNQLS 240 (964)
Q Consensus 236 ~N~l~ 240 (964)
+|.+.
T Consensus 114 ~N~~~ 118 (174)
T 2r9u_A 114 NNPWD 118 (174)
T ss_dssp SSCBC
T ss_pred CCCcc
Confidence 55544
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.7e-14 Score=156.78 Aligned_cols=160 Identities=18% Similarity=0.208 Sum_probs=107.7
Q ss_pred ccCcEEeccCCcccccCCcccccc-----CCcceeecccccccCCCchhh-hccCCCCceecccCccccccCCCcc----
Q 037111 419 TQLHELDFSSNHLVGKVPLELANL-----TSLNDLILNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSKSIPGNMG---- 488 (964)
Q Consensus 419 ~~L~~L~Ls~N~l~~~~~~~l~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~---- 488 (964)
+.|+.|+|++|.|+......+... ++|++|+|++|.++......+ ..+++|+.|+|++|.+++.....+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456777777777764433333332 577777777777764333333 2456777888888877655444442
Q ss_pred -cccccceecCCccccCcc----chhhhhccccCCeecccCccccCCC----ChhcccccccceeeccCCcCCCc----c
Q 037111 489 -YLLKLHYLNMSSNEFSQE----IPIQLGKLVQLSELDLSHNLLRGEI----PPEICNLESLEKLNLSHNNLSGS----I 555 (964)
Q Consensus 489 -~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~----~ 555 (964)
..++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++.. +..+...++|+.|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 346788888888888653 3444567788888888888887432 45566777889999999988753 3
Q ss_pred cccccccccceEEEecCCccccc
Q 037111 556 PTNFENMHGLLSIDISYNELDGP 578 (964)
Q Consensus 556 ~~~~~~l~~L~~l~ls~N~l~~~ 578 (964)
+..+...++|+.|||++|+++..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHH
Confidence 44555678899999999988653
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.1e-14 Score=159.63 Aligned_cols=173 Identities=20% Similarity=0.141 Sum_probs=102.5
Q ss_pred CCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCc-ccccCcEEeccCCcccccCCcccc-ccCCcce
Q 037111 370 YPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIG-NATQLHELDFSSNHLVGKVPLELA-NLTSLND 447 (964)
Q Consensus 370 l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~ 447 (964)
.+.|+.|+|++|.++......+..+ +. ..++|++|+|++|.|++.....+. .+++|+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~--------------------L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~ 130 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAV--------------------LGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARK 130 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHH--------------------HSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEE
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHH--------------------HhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccH
Confidence 4567788888887765433222211 01 123556666666655433222222 3456666
Q ss_pred eecccccccCCCchhhh-----ccCCCCceecccCcccccc----CCCcccccccceecCCccccCccc----hhhhhcc
Q 037111 448 LILNGNQLSGGIPPELG-----LLTDLGYLDLSANRFSKSI----PGNMGYLLKLHYLNMSSNEFSQEI----PIQLGKL 514 (964)
Q Consensus 448 L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l 514 (964)
|+|++|.++......+. ..++|+.|+|++|.|++.. +..+..+++|++|+|++|+|++.. +..+...
T Consensus 131 L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 131 LGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp EECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred hhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 66666666543333332 3466777777777765422 223355667777788887776532 4556677
Q ss_pred ccCCeecccCccccCC----CChhcccccccceeeccCCcCCCccccccccc
Q 037111 515 VQLSELDLSHNLLRGE----IPPEICNLESLEKLNLSHNNLSGSIPTNFENM 562 (964)
Q Consensus 515 ~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 562 (964)
++|+.|+|++|.|+.. ++..+...++|++|+|++|+|+......+..+
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 7888888888888753 23344456888889999988886655555443
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.5e-11 Score=135.55 Aligned_cols=331 Identities=9% Similarity=0.098 Sum_probs=149.5
Q ss_pred CccccCCC-CcchhhcccccccCCccccccCccccceeeccccc---cCCCChhhhhcccccceeeccccccccccCCcc
Q 037111 196 PSSIGNLS-NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ---LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSL 271 (964)
Q Consensus 196 p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 271 (964)
..+|.++. .|+.+.+..+ ++.+...+|.++.+|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++......|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 34555553 4777776643 555556677777777777776653 44333456666666666665543 332334456
Q ss_pred cCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCe
Q 037111 272 SNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLER 351 (964)
Q Consensus 272 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 351 (964)
..+.+|+.+.+..+ +.......|..+.+|+.+.+..+ ++.+....|. ...|+.+.+..+. .......|.++.+++.
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~-~~i~~~af~~c~~l~~ 209 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKV-TRIGTNAFSECFALST 209 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTC-CEECTTTTTTCTTCCE
T ss_pred hhhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcc-cccccchhhhccccce
Confidence 66666666666543 22234455556666666665543 2322222232 1234444433221 1122233333444333
Q ss_pred eecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcc
Q 037111 352 VRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHL 431 (964)
Q Consensus 352 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l 431 (964)
.....+.........+. .......... .+.....+..+.+. +.+
T Consensus 210 ~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~-----------~~~~~~~~~~~~ip-~~v 253 (394)
T 4gt6_A 210 ITSDSESYPAIDNVLYE------------------------KSANGDYALI-----------RYPSQREDPAFKIP-NGV 253 (394)
T ss_dssp EEECCSSSCBSSSCEEE------------------------ECTTSCEEEE-----------ECCTTCCCSEEECC-TTE
T ss_pred ecccccccccccceeec------------------------cccccccccc-----------ccccccccceEEcC-Ccc
Confidence 33333222111111100 0000000000 00011112222222 122
Q ss_pred cccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhh
Q 037111 432 VGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL 511 (964)
Q Consensus 432 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 511 (964)
+......|.++..|+.+.+.++..+ ....+|..+++|+.+.+. +.++.....+|.++.+|+.+++..+ ++.+...+|
T Consensus 254 ~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF 330 (394)
T 4gt6_A 254 ARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAF 330 (394)
T ss_dssp EEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred eEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHh
Confidence 2233344555555555555443322 333445555555555554 3344444455666666666666543 444445566
Q ss_pred hccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcc
Q 037111 512 GKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575 (964)
Q Consensus 512 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l 575 (964)
..+.+|+.+.|..+ ++.....+|.++++|+.+++.+|... -..|.....|+.+.+..|.+
T Consensus 331 ~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 331 AGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred hCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 66666666666543 44344555666666666666665432 13455555666666655443
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.32 E-value=7.6e-11 Score=132.80 Aligned_cols=323 Identities=11% Similarity=0.099 Sum_probs=190.1
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCC---CCCCCCccccCCCCcchhhcccccccCCccccccCcccccee
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNS---LPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 232 (964)
.|+.+.+..+ ++.+-..+|.++++|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++.+....|..+.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 3566666543 554555677788888888887664 44344567777888888877655 454556678888888888
Q ss_pred eccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCc
Q 037111 233 ELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 233 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 312 (964)
.+..+. .......|..+..|+.+.+..+ ++..-..+|. ..+|+.+.+..+-.. ....+|..+.++.......+...
T Consensus 143 ~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~ 218 (394)
T 4gt6_A 143 TIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYP 218 (394)
T ss_dssp ECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSC
T ss_pred ccccee-eeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceecccccccc
Confidence 886543 3244567778888888888655 4423334454 356888877655433 45566777777777776665544
Q ss_pred ccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCcccc
Q 037111 313 GFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW 392 (964)
Q Consensus 313 ~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 392 (964)
...-..+......... ...+.....+..+.+. +.++.+....|.....|+.+.+..+. ..+...+|.
T Consensus 219 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~ 285 (394)
T 4gt6_A 219 AIDNVLYEKSANGDYA-----------LIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFM 285 (394)
T ss_dssp BSSSCEEEECTTSCEE-----------EEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTT
T ss_pred cccceeeccccccccc-----------ccccccccccceEEcC-CcceEcccceeeecccccEEeccccc-ceecCcccc
Confidence 2211111110000000 0011112223333332 23444555666666777777665443 234556677
Q ss_pred CCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCce
Q 037111 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYL 472 (964)
Q Consensus 393 ~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 472 (964)
+++.|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++++|+.+.|..+ ++.+...+|.++++|+.+
T Consensus 286 ~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 286 NCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNI 362 (394)
T ss_dssp TCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEE
T ss_pred cccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEE
Confidence 77777777774 4455555667777777888887654 55556677888888888888654 555566778888888888
Q ss_pred ecccCccccccCCCcccccccceecCCcccc
Q 037111 473 DLSANRFSKSIPGNMGYLLKLHYLNMSSNEF 503 (964)
Q Consensus 473 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 503 (964)
++.+|.... ..+....+|+.+.+..|.+
T Consensus 363 ~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 363 EYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp EESSCHHHH---HTCBCCCCC----------
T ss_pred EECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 888776532 3456667788887776655
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.23 E-value=9.9e-12 Score=137.60 Aligned_cols=103 Identities=22% Similarity=0.176 Sum_probs=56.9
Q ss_pred eeecccc-cccCCCchhhhccCCCCceeccc-CccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccC
Q 037111 447 DLILNGN-QLSGGIPPELGLLTDLGYLDLSA-NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSH 524 (964)
Q Consensus 447 ~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 524 (964)
.++++++ .++ .+|. +..+++|+.|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3455555 555 3444 55555566666654 555555555555555555555555555555555555555555555555
Q ss_pred ccccCCCChhcccccccceeeccCCcCC
Q 037111 525 NLLRGEIPPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 525 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
|+|++..+..|..++ |+.|+|++|+|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 555544333444433 555555555555
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.8e-11 Score=135.39 Aligned_cols=101 Identities=24% Similarity=0.167 Sum_probs=52.0
Q ss_pred eeecccC-CccCcCCcccCCCCcccEEEccc-cccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEec
Q 037111 112 FLNLSSN-HFSGKIPSEIGLLTNLEVLHMFV-NHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYN 188 (964)
Q Consensus 112 ~L~Ls~n-~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 188 (964)
.++++++ +++ .+|. +..+++|++|+|++ |++++.++. |+.|++|++|+|++|+|++..|..|++|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3466665 666 4555 66666666666653 555555442 55555555555555555555555555555555555555
Q ss_pred CCCCCCCCccccCCCCcchhhcccccc
Q 037111 189 NSLPGSIPSSIGNLSNLVYLFLKKNHL 215 (964)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~L~~N~l 215 (964)
|+|++..+..|..++ |++|+|.+|.+
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCc
Confidence 555533333333322 44444444433
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=5.2e-11 Score=126.06 Aligned_cols=146 Identities=14% Similarity=0.061 Sum_probs=113.6
Q ss_pred HHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeE
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 763 (964)
......|+....++.|+.+.||++... ++.+++|+...... .....+.+|+.+++.+. +..+.++++++.+.+..|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 345667888888898999999999865 78999999864211 11235778999988774 677889999999888999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC---------------------------------- 809 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------- 809 (964)
+||||++|.++.+.+.. ......++.+++++++.||+..
T Consensus 87 lv~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EEEECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEEEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 99999999999876421 1223468889999999999810
Q ss_pred ----------------------CCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 810 ----------------------RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 810 ----------------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
...++|||++|.||+++.+..+.|+||+.+.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876666799998764
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.9e-09 Score=118.15 Aligned_cols=146 Identities=11% Similarity=0.029 Sum_probs=80.3
Q ss_pred ccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCccccc
Q 037111 341 KTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQ 420 (964)
Q Consensus 341 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~ 420 (964)
..+..+.+|+.+.+..+ ++.+....|.....|+.+.+..+ ++.+....|.++.+|+.+.+..+ +......+|.++++
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 34444455555555432 34444455555555555555443 44444455555666666655432 33344455666666
Q ss_pred CcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCccccc
Q 037111 421 LHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLL 491 (964)
Q Consensus 421 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 491 (964)
|+.+++.++.++.+....|.++.+|+.+.|..+ ++.+...+|.++++|+.+.+..+ ++.+...+|.+..
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 666666666665555566666666666666543 44344556666666766666544 4445555665543
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.04 E-value=9.1e-09 Score=115.11 Aligned_cols=303 Identities=11% Similarity=0.050 Sum_probs=142.7
Q ss_pred cccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccc
Q 037111 222 SFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNL 301 (964)
Q Consensus 222 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 301 (964)
++....+|+.+.+..+ ++.+...+|.++.+|+.+.|..+ ++..-..+|.++ +|+.+.+..+ ++.....+|.. .+|
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 3455566777766543 44344556777777777777543 543444455554 4666655433 33233334443 356
Q ss_pred cEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCC
Q 037111 302 NSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYN 381 (964)
Q Consensus 302 ~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 381 (964)
+.+.+..+- +......|... ++..+.+.. .++.+....|....+++.+.+..+
T Consensus 116 ~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~-------------------------~v~~i~~~~f~~~~~l~~~~~~~~ 168 (379)
T 4h09_A 116 DDFEFPGAT-TEIGNYIFYNS-SVKRIVIPK-------------------------SVTTIKDGIGYKAENLEKIEVSSN 168 (379)
T ss_dssp SEEECCTTC-CEECTTTTTTC-CCCEEEECT-------------------------TCCEECSCTTTTCTTCCEEEECTT
T ss_pred ccccCCCcc-ccccccccccc-eeeeeeccc-------------------------eeeccccchhcccccccccccccc
Confidence 666665432 22222222221 233332222 122333333444444444443332
Q ss_pred eeccc------------cCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceee
Q 037111 382 KFYGE------------LSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLI 449 (964)
Q Consensus 382 ~i~~~------------~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 449 (964)
..... ....+..+..+..+.+.... .......+....+|+.+.+..+ +.......|.++..|+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~ 246 (379)
T 4h09_A 169 NKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIA 246 (379)
T ss_dssp CSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEE
T ss_pred cceeecccceecccccceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEE
Confidence 21100 01112223333333332221 1122334445555666555443 2334444555566666666
Q ss_pred cccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccC
Q 037111 450 LNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG 529 (964)
Q Consensus 450 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 529 (964)
+..+ ++.....+|..+.+|+.+.+..+ +.......|.++.+|+.+.+.++.++.+...+|.++.+|+.++|..+ ++.
T Consensus 247 lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~ 323 (379)
T 4h09_A 247 IPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKT 323 (379)
T ss_dssp ECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCE
T ss_pred cCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccE
Confidence 6544 33344445555566666655433 33344455556666666666666555555555666666666666543 443
Q ss_pred CCChhcccccccceeeccCCcCCCccccccccc
Q 037111 530 EIPPEICNLESLEKLNLSHNNLSGSIPTNFENM 562 (964)
Q Consensus 530 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 562 (964)
....+|.++++|+.+.+..+ ++.+-..+|.+.
T Consensus 324 I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 324 IQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp ECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred EHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 44455666666666665443 443344444433
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.01 E-value=3.2e-10 Score=119.82 Aligned_cols=136 Identities=15% Similarity=0.108 Sum_probs=99.8
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc--eeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN--IVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e 767 (964)
.+......+.|..+.||++...+|+.|++|..... ....+..|+.+++.+.+.+ +.+++++...++..++|||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 44443333466679999998877888999997532 1234677888888775434 5568898888888999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC--------------------------------------
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC-------------------------------------- 809 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 809 (964)
|++|.++. ... .+ ...++.++++++..||+..
T Consensus 96 ~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 96 EVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp CCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred ecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 99998884 211 11 2357778888888888752
Q ss_pred -----------------CCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 810 -----------------RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 810 -----------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
...++|||++|.||+++.++.+.|+|||.+.
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999877667799999874
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.4e-10 Score=127.59 Aligned_cols=85 Identities=15% Similarity=0.221 Sum_probs=55.2
Q ss_pred CccccceeeccccccCCCChhhhh---cccccceeeccccccccc----cCCcccCccccceeecccccccccCCccccc
Q 037111 225 YLRKLTKLELSNNQLSGSIPQEIG---NLKLLTDLSLSQNQLRGT----VPSSLSNLSSLEILHLYDNQLSGHIPQEIGN 297 (964)
Q Consensus 225 ~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 297 (964)
.+++|++|+|++|++.+..+..+. .+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.|+......+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 457788888887777644434443 467788888888888753 3344456788888888888877543333333
Q ss_pred CccccEEEeeCcc
Q 037111 298 FMNLNSLSVGGNQ 310 (964)
Q Consensus 298 l~~L~~L~l~~N~ 310 (964)
.- ...+++++++
T Consensus 330 al-g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL-PMKIDVSDSQ 341 (362)
T ss_dssp HC-CSEEECCSBC
T ss_pred Hc-CCEEEecCCc
Confidence 11 3567888776
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.3e-10 Score=124.54 Aligned_cols=131 Identities=19% Similarity=0.262 Sum_probs=78.5
Q ss_pred cCCcceeecccccccCCCchhhh--ccCCCCceeccc--Cccccc-----cCCCc--ccccccceecCCccccCccchhh
Q 037111 442 LTSLNDLILNGNQLSGGIPPELG--LLTDLGYLDLSA--NRFSKS-----IPGNM--GYLLKLHYLNMSSNEFSQEIPIQ 510 (964)
Q Consensus 442 l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~--N~l~~~-----~~~~~--~~l~~L~~L~Ls~N~l~~~~~~~ 510 (964)
+++|++|+|..|.++......+. .+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.+..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 45666666665555433333333 456666666542 111110 00111 24678888888888887554444
Q ss_pred hh---ccccCCeecccCccccCC----CChhcccccccceeeccCCcCCCcccccccc-cccceEEEecCCc
Q 037111 511 LG---KLVQLSELDLSHNLLRGE----IPPEICNLESLEKLNLSHNNLSGSIPTNFEN-MHGLLSIDISYNE 574 (964)
Q Consensus 511 ~~---~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~l~ls~N~ 574 (964)
+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+.. + ...+|++.|+
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 43 477888888888888753 2333456788889999988887554444443 2 3568888877
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.87 E-value=4.9e-09 Score=116.33 Aligned_cols=143 Identities=17% Similarity=0.244 Sum_probs=106.9
Q ss_pred ccceeecCCceeEEEEEeCCCCeEEEEEec--cccCchhhHHHHHHHHHHHhCCC--CCceeeEEeeeecC---ceeEEE
Q 037111 693 ESFCIGRGGYGSVYKAELPSGDTVAVKKLH--SFTGETTHQKEFLSEIKALTGVR--HRNIVKFYGFCSHA---RHSFLV 765 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv 765 (964)
..+.++.|.++.||+.+.. +..+++|+.. ... .......+.+|+.+++.+. +..++++++++.+. +..++|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~-~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSK-LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCC-CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4567899999999999876 4688899865 211 1122346778999988886 45688999998776 458999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------------------
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC------------------------------------ 809 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 809 (964)
|||++|..+.+.. ...++...+..++.+++++|+.||+..
T Consensus 120 me~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 120 MEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp EECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9999998775421 123677888899999999999999731
Q ss_pred -------------------CCCeEeccCCCCCeEECCCCc--eEEeccCcccc
Q 037111 810 -------------------RPPIVHRDVSSKNVLLDFEYE--AHVSDFGTAKL 841 (964)
Q Consensus 810 -------------------~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~a~~ 841 (964)
...++|||+++.||+++.++. +.|.||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998864
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.79 E-value=2.7e-10 Score=118.58 Aligned_cols=159 Identities=17% Similarity=0.128 Sum_probs=84.8
Q ss_pred CceeeceEeCCCC-CeeEEecCC---CCCCCccCCCccCcCcceeEEeccCCccccCCC-ccccCCCCcCe--eecccCC
Q 037111 47 PCTWSGISCNHAG-RIISINLTS---TSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIP-SPIGNLTKLKF--LNLSSNH 119 (964)
Q Consensus 47 ~C~w~gv~C~~~~-~v~~l~l~~---~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~--L~Ls~n~ 119 (964)
.|+|.|+.|+..+ ||+.+...+ .++.|.+.+-....+.. .|...+|.-++.++ +.|...+.|+. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 4789999998654 665554433 22223332100001110 11222233333222 12444455555 5666664
Q ss_pred cc---CcCCcccCCCCcccEEEccccccCCc--ccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCC--CCcEEEEecCCC
Q 037111 120 FS---GKIPSEIGLLTNLEVLHMFVNHLNGS--IPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLS--SLVGLYLYNNSL 191 (964)
Q Consensus 120 l~---~~~p~~~~~l~~L~~L~l~~n~l~~~--~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~--~L~~L~L~~N~l 191 (964)
.. +.++....++++|++|+|++|++++. +|. +..+++|+.|+|++|+|++. ..+..++ +|++|+|++|.+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 32 22222224567777777777777763 233 45677777777777777754 2333333 778888888887
Q ss_pred CCCCCc-------cccCCCCcchhh
Q 037111 192 PGSIPS-------SIGNLSNLVYLF 209 (964)
Q Consensus 192 ~~~~p~-------~~~~l~~L~~L~ 209 (964)
.+.+|. .+..+++|+.||
T Consensus 233 ~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 233 CDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred ccccCcchhHHHHHHHHCcccCeEC
Confidence 765552 255667777665
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.77 E-value=3.7e-09 Score=114.31 Aligned_cols=185 Identities=21% Similarity=0.221 Sum_probs=122.2
Q ss_pred cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCc--eeeEEeeeecCc---eeEEEEE
Q 037111 694 SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRN--IVKFYGFCSHAR---HSFLVYE 767 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e 767 (964)
.+.++.|....||+.. +.+++|+... ......+.+|++.++.+. +.. +.+++....... ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4568999999999863 5689998542 233467888999987763 322 445555544333 4589999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC--------------------------------------
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC-------------------------------------- 809 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 809 (964)
+++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 97 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 97 KIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred ccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 999988765332 12566777788888888888888621
Q ss_pred -----------------CCCeEeccCCCCCeEECC--CCceEEeccCcccccCCCCCCcc--cc---cc---------cc
Q 037111 810 -----------------RPPIVHRDVSSKNVLLDF--EYEAHVSDFGTAKLLKPDSSNWS--EL---AG---------TY 856 (964)
Q Consensus 810 -----------------~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~--~~---~g---------~~ 856 (964)
...++|||++|.||+++. ...+.+.||+.+....+...-.. .. .+ ..
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 245899999999999998 45678999998865432110000 00 00 00
Q ss_pred cccc-ccccccCCCCcchhHHHHHHHHHHHHhCCCCC
Q 037111 857 GYVA-PELAYTMKVTEKCDVYSFGVLALEVIKGQHPK 892 (964)
Q Consensus 857 ~y~a-PE~~~~~~~~~~sDvwSlGvll~el~tg~~p~ 892 (964)
+... |+.... .....+.|++|.++|++.+|+.+|
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1111 222111 122368999999999999998775
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.52 E-value=1.5e-08 Score=100.54 Aligned_cols=119 Identities=17% Similarity=0.192 Sum_probs=58.7
Q ss_pred cccccCCcceeecccc-cccCC----CchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhh
Q 037111 438 ELANLTSLNDLILNGN-QLSGG----IPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512 (964)
Q Consensus 438 ~l~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 512 (964)
.+...++|++|+|++| .|... +...+...++|++|+|++|.|.+..... +...+.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~--------------------l~~~L~ 90 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFA--------------------LAEMLK 90 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHH--------------------HHHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHH--------------------HHHHHH
Confidence 3445566677777666 66532 2223333445555555555554322111 122233
Q ss_pred ccccCCeecccCccccCC----CChhcccccccceeec--cCCcCCCc----ccccccccccceEEEecCCccc
Q 037111 513 KLVQLSELDLSHNLLRGE----IPPEICNLESLEKLNL--SHNNLSGS----IPTNFENMHGLLSIDISYNELD 576 (964)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L--s~N~l~~~----~~~~~~~l~~L~~l~ls~N~l~ 576 (964)
..++|++|+|++|.|+.. +...+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 91 ~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 91 VNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred hCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334555555555555432 2333444455666666 55666533 2333444466666666666654
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.5e-08 Score=100.52 Aligned_cols=115 Identities=16% Similarity=0.128 Sum_probs=78.0
Q ss_pred CCcccccCcEEeccCC-ccccc----CCccccccCCcceeecccccccCC----CchhhhccCCCCceecccCcccccc-
Q 037111 414 EIGNATQLHELDFSSN-HLVGK----VPLELANLTSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRFSKSI- 483 (964)
Q Consensus 414 ~~~~l~~L~~L~Ls~N-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~- 483 (964)
.+...+.|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|++..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3566789999999999 88653 334456678999999999999753 3344555678888888888887542
Q ss_pred ---CCCcccccccceecC--CccccCccc----hhhhhccccCCeecccCcccc
Q 037111 484 ---PGNMGYLLKLHYLNM--SSNEFSQEI----PIQLGKLVQLSELDLSHNLLR 528 (964)
Q Consensus 484 ---~~~~~~l~~L~~L~L--s~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~ 528 (964)
...+...+.|++|+| ++|.|+... ...+...++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334555566777777 667776442 233334456666666666654
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.44 E-value=2.4e-08 Score=103.84 Aligned_cols=65 Identities=25% Similarity=0.319 Sum_probs=27.0
Q ss_pred cccCCeecccCccccC--CCChhcccccccceeeccCCcCCCcccccccccc--cceEEEecCCcccccCC
Q 037111 514 LVQLSELDLSHNLLRG--EIPPEICNLESLEKLNLSHNNLSGSIPTNFENMH--GLLSIDISYNELDGPIP 580 (964)
Q Consensus 514 l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~l~ls~N~l~~~~~ 580 (964)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. .|+.|+|++|++++.+|
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 3444444444444443 1223333444444444444444432 1122222 44444444444444333
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=5.9e-06 Score=87.33 Aligned_cols=134 Identities=15% Similarity=0.173 Sum_probs=97.9
Q ss_pred eeecCCce-eEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEEEeccCC
Q 037111 696 CIGRGGYG-SVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 696 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.+..|..| .||+.... ++..+++|+-.. .....+.+|...++.+. +--+.++++++.+.+..++|||+++|.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 45556666 68998765 456789998542 23456788999887774 334778899999999999999999998
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------------------------------------------
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC------------------------------------------- 809 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------- 809 (964)
++.+...... .....++.+++..++.||+..
T Consensus 106 ~~~~~~~~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 106 TAFQVLEEYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp EHHHHHHHCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccccCCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 8877653321 223456667777777777531
Q ss_pred ------------CCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 810 ------------RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 810 ------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
...++|||+.+.||+++.++.+-|.||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237999999999999987777899999874
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=7.7e-06 Score=88.02 Aligned_cols=137 Identities=15% Similarity=0.163 Sum_probs=94.2
Q ss_pred cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCC---ceeeEEeeee-cCceeEEEEEec
Q 037111 694 SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR---NIVKFYGFCS-HARHSFLVYEYL 769 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~ 769 (964)
.+.++.|....||+. ++.+++|+-. .......+..|+.+++.+.+. .+.+++.++. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456888999999998 5778999843 223346788999999888642 3566677664 456688999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhC-----------------------------------------
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE----------------------------------------- 808 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------------------------------------- 808 (964)
+|.++.+..-. .++......++.++++.++.||+.
T Consensus 96 ~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 96 QGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp CSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred CCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 99887663211 123344444555555555555542
Q ss_pred ----------------CCCCeEeccCCCCCeEECC---CCc-eEEeccCccccc
Q 037111 809 ----------------CRPPIVHRDVSSKNVLLDF---EYE-AHVSDFGTAKLL 842 (964)
Q Consensus 809 ----------------~~~~iiH~dlkp~Nill~~---~~~-~kl~Dfg~a~~~ 842 (964)
..+.++|||++|.||+++. ++. +.|.||+.+...
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2335799999999999987 455 489999988643
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=9.4e-06 Score=89.60 Aligned_cols=82 Identities=6% Similarity=0.004 Sum_probs=54.6
Q ss_pred ccee-ecCCceeEEEEEeC-------CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCC-C--CceeeEEeeeecC--
Q 037111 694 SFCI-GRGGYGSVYKAELP-------SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVR-H--RNIVKFYGFCSHA-- 759 (964)
Q Consensus 694 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 759 (964)
.+.| +.|....+|+.... +++.+++|+...... .......+..|+.+++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 88889999998654 266888987643210 0001134667888877764 2 3567788887665
Q ss_pred -ceeEEEEEeccCCCHH
Q 037111 760 -RHSFLVYEYLERGSLA 775 (964)
Q Consensus 760 -~~~~lv~e~~~~gsL~ 775 (964)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 4578999999987654
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.87 E-value=2.8e-06 Score=81.67 Aligned_cols=81 Identities=12% Similarity=0.075 Sum_probs=33.9
Q ss_pred CCceecccCccccccCCCcccccccceecCCccc-cCccchhhhhcc----ccCCeecccCcc-ccCCCChhcccccccc
Q 037111 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNE-FSQEIPIQLGKL----VQLSELDLSHNL-LRGEIPPEICNLESLE 542 (964)
Q Consensus 469 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~ 542 (964)
|+.|||+++.+++..-..+.++++|+.|+|++|. |++..-..++.+ ++|++|+|++|. |+..--..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 3333333333333333333344444444444442 443333333332 245555555542 4433333344455555
Q ss_pred eeeccCC
Q 037111 543 KLNLSHN 549 (964)
Q Consensus 543 ~L~Ls~N 549 (964)
.|+|+++
T Consensus 143 ~L~L~~c 149 (176)
T 3e4g_A 143 YLFLSDL 149 (176)
T ss_dssp EEEEESC
T ss_pred EEECCCC
Confidence 5555554
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.77 E-value=6.1e-06 Score=79.35 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=46.4
Q ss_pred ccCcEEeccCCcccccCCccccccCCcceeeccccc-ccCCCchhhhccCCCCceecccCccccccCCCcccccccceec
Q 037111 419 TQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQ-LSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLN 497 (964)
Q Consensus 419 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 497 (964)
..|+.||++++.|++..-..+..+++|++|+|++|. |++..-..+..++ ...++|++|+
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~--------------------~~~~~L~~L~ 120 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLE--------------------NLQKSMLEME 120 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCH--------------------HHHHHCCEEE
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcc--------------------cccCCCCEEE
Confidence 346666666666655444445555555555555553 4432222222210 0013566666
Q ss_pred CCccc-cCccchhhhhccccCCeecccCcc
Q 037111 498 MSSNE-FSQEIPIQLGKLVQLSELDLSHNL 526 (964)
Q Consensus 498 Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~ 526 (964)
|++|. ||+..-..+.++++|+.|+|+++.
T Consensus 121 Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 121 IISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp EESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred cCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 66653 665555556666777777777764
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00017 Score=78.89 Aligned_cols=139 Identities=22% Similarity=0.297 Sum_probs=78.2
Q ss_pred ceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-----CCCceeeEE-e--eeecCceeEEEE
Q 037111 695 FCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-----RHRNIVKFY-G--FCSHARHSFLVY 766 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lv~ 766 (964)
+.|+.|..+.||+....+| .+++|+... .. ..+..|+.+++.+ ..|.++... | +....+..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR---PE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS---CH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC---CH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 4566677899999987654 589998864 11 2233444444433 234443311 1 123456789999
Q ss_pred EeccCCCHH-----------HH---hhh--cCC--C--------CCCHHHH-----------------------------
Q 037111 767 EYLERGSLA-----------RI---LSS--ETA--T--------EMDWSKR----------------------------- 791 (964)
Q Consensus 767 e~~~~gsL~-----------~~---l~~--~~~--~--------~l~~~~~----------------------------- 791 (964)
||++|.++. +. ++. ... . ...|...
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 11 111 100 0 0122211
Q ss_pred --HHHHHHHHHHHHHHhh----------CCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 792 --VNVIKGVAHALSYMHH----------ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 792 --~~i~~~i~~~l~~LH~----------~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..+..++..++++|+. .....++|||+++.||+++.++.+.|.||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111234446666763 124589999999999999888899999999774
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0003 Score=75.16 Aligned_cols=138 Identities=18% Similarity=0.197 Sum_probs=92.0
Q ss_pred ccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC---CCceeeEEeeeecCceeEEEEEec
Q 037111 693 ESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR---HRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
..+.|+.|....+|+... +++.+++|+.... ....+..|++.++.+. ...++++++++...+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 356789999999999987 4778999986421 2466788988888773 366888999888888999999999
Q ss_pred cCCCHH--------HH---hhhcCC-C-------------------CCCHHHHH---HHHH----------------HHH
Q 037111 770 ERGSLA--------RI---LSSETA-T-------------------EMDWSKRV---NVIK----------------GVA 799 (964)
Q Consensus 770 ~~gsL~--------~~---l~~~~~-~-------------------~l~~~~~~---~i~~----------------~i~ 799 (964)
+|..+. +. ++.... . .-+|.... ++.. .++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 997542 11 122111 0 02344321 1111 111
Q ss_pred H-HHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccC
Q 037111 800 H-ALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 800 ~-~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
+ ....|.. ..++.++|+|+.+.|++++.++ +.|.|++
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 1223432 2256899999999999999887 8888974
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00014 Score=81.47 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=48.2
Q ss_pred cceeecCCceeEEEEEeC-CCCeEEEEEeccccC---c--hhhHHHHHHHHHHHhCCCC--C-ceeeEEeeeecCceeEE
Q 037111 694 SFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG---E--TTHQKEFLSEIKALTGVRH--R-NIVKFYGFCSHARHSFL 764 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~--~~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 764 (964)
.+.+|.|..+.||+++.. +++.|+||....... . ......+..|.++++.+.. | .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999754 468899998653211 0 1122345668777776531 3 34456654 3445689
Q ss_pred EEEeccCC
Q 037111 765 VYEYLERG 772 (964)
Q Consensus 765 v~e~~~~g 772 (964)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.53 E-value=2.1e-05 Score=77.07 Aligned_cols=15 Identities=33% Similarity=0.563 Sum_probs=7.0
Q ss_pred cccccceEEEecCCc
Q 037111 560 ENMHGLLSIDISYNE 574 (964)
Q Consensus 560 ~~l~~L~~l~ls~N~ 574 (964)
..-+.|+.|++++|.
T Consensus 154 ~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 154 EENESLLRVGISFAS 168 (197)
T ss_dssp HHCSSCCEEECCCCC
T ss_pred HhCCCcCeEeccCCC
Confidence 333445555554443
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.50 E-value=2.9e-05 Score=76.12 Aligned_cols=64 Identities=14% Similarity=0.209 Sum_probs=31.1
Q ss_pred cccCcEEeccCC-ccccc----CCccccccCCcceeecccccccCC----CchhhhccCCCCceecccCcccc
Q 037111 418 ATQLHELDFSSN-HLVGK----VPLELANLTSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRFSK 481 (964)
Q Consensus 418 l~~L~~L~Ls~N-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~ 481 (964)
-+.|++|+|++| +|... +...+..-+.|+.|+|++|.|.+. +.+.+...+.|+.|+|++|.|++
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 345566666653 55321 222333445566666666655522 22333344555555555555543
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00082 Score=75.67 Aligned_cols=78 Identities=12% Similarity=0.058 Sum_probs=49.1
Q ss_pred CCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccc--ccccccccccccC---CCCcchhHHHHHHHHHH
Q 037111 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG--TYGYVAPELAYTM---KVTEKCDVYSFGVLALE 884 (964)
Q Consensus 810 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~sDvwSlGvll~e 884 (964)
.+.++|||++|.||+++.++ +++.||+.+....+... ...... ...|.+|+..... ......++......+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999998876 99999998865332211 011111 1345666654311 11234556688888888
Q ss_pred HHhCC
Q 037111 885 VIKGQ 889 (964)
Q Consensus 885 l~tg~ 889 (964)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00035 Score=74.21 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=55.9
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-C--CceeeEEeeeecCceeEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-H--RNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lv~ 766 (964)
+...+..+|.|..+.||+.+..+|++|++|+...... .....|..|+..++.+. . --+.+++++. ..++||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~ 89 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEE
Confidence 4556778999999999999999999999998653221 22245778988887763 2 2345555542 347899
Q ss_pred EeccCCCH
Q 037111 767 EYLERGSL 774 (964)
Q Consensus 767 e~~~~gsL 774 (964)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987643
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0014 Score=71.19 Aligned_cols=142 Identities=18% Similarity=0.176 Sum_probs=72.9
Q ss_pred ceeecCCcee-EEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC--CCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGS-VYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR--HRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.|+.|.... +|+....+++.+++|....... ..+..|+.+++.+. .-.+.+++.+..+.+ ++|||++.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 4566565554 6787764477788876543210 12334555555442 123556666644333 789999977
Q ss_pred CCHHHHhhhcC---------------------C---CCCCHHHHH-------HH-------------HHHHHHHHHHHh-
Q 037111 772 GSLARILSSET---------------------A---TEMDWSKRV-------NV-------------IKGVAHALSYMH- 806 (964)
Q Consensus 772 gsL~~~l~~~~---------------------~---~~l~~~~~~-------~i-------------~~~i~~~l~~LH- 806 (964)
..+.+++.... . ...+..... .+ ...+..+++.+.
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 66655442110 0 011111100 00 011112222221
Q ss_pred --hCCCCCeEeccCCCCCeEECCC----CceEEeccCcccccC
Q 037111 807 --HECRPPIVHRDVSSKNVLLDFE----YEAHVSDFGTAKLLK 843 (964)
Q Consensus 807 --~~~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~~~~ 843 (964)
......++|||+.+.||+++.+ +.+.|.||+.+....
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 1124479999999999999875 679999999886543
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0007 Score=61.97 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=39.1
Q ss_pred eecccCcccc-CCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCccccc
Q 037111 519 ELDLSHNLLR-GEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGP 578 (964)
Q Consensus 519 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~ 578 (964)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|+|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 5666666665 23443332 3577778888887776677777778888888888877664
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.015 Score=62.77 Aligned_cols=157 Identities=13% Similarity=0.131 Sum_probs=87.1
Q ss_pred ccHHHHHHHhhcccc-----cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC--Cceee
Q 037111 679 LVYEEIIRSINNFDE-----SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH--RNIVK 751 (964)
Q Consensus 679 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~ 751 (964)
++.+.+......|.. ...++ |....||+....+|+.+++|....... ....+..|...++.+.. -.+++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecc
Confidence 344455555554432 23566 888899999877787899999753211 23455667777665531 12344
Q ss_pred EEee-----eecCceeEEEEEeccCCCHH-----------HH---hhh--c--C---CCCCCHHHH----HHH-------
Q 037111 752 FYGF-----CSHARHSFLVYEYLERGSLA-----------RI---LSS--E--T---ATEMDWSKR----VNV------- 794 (964)
Q Consensus 752 l~~~-----~~~~~~~~lv~e~~~~gsL~-----------~~---l~~--~--~---~~~l~~~~~----~~i------- 794 (964)
++.. ....+..++||||++|..+. +. ++. . . ....++... ..+
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 4443 12245668899999885431 11 111 0 0 011222111 001
Q ss_pred --------HHHHHHHHHHHhhC----CCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 795 --------IKGVAHALSYMHHE----CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 795 --------~~~i~~~l~~LH~~----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
...+...++.+... ....++|||+++.||+++ + .+.+.||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 234689999999999999 4 899999988754
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0097 Score=64.02 Aligned_cols=157 Identities=11% Similarity=0.121 Sum_probs=85.3
Q ss_pred ccHHHHHHHhhcccc-----cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc--eee
Q 037111 679 LVYEEIIRSINNFDE-----SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN--IVK 751 (964)
Q Consensus 679 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 751 (964)
++.+++......|.. .+.|+.|....+|+....+| .+++|...... . ...+..|+.+++.+.... +.+
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-~---~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV-E---KNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC-C---HHHHHHHHHHHHHHHHCCCCCCc
Confidence 344555555555654 34566788899999987655 68899876421 1 123445666655442111 233
Q ss_pred EEee------eecCceeEEEEEeccCCCHHH-----------H---hhhc--C-CCC----C---CHHHHHH--------
Q 037111 752 FYGF------CSHARHSFLVYEYLERGSLAR-----------I---LSSE--T-ATE----M---DWSKRVN-------- 793 (964)
Q Consensus 752 l~~~------~~~~~~~~lv~e~~~~gsL~~-----------~---l~~~--~-~~~----l---~~~~~~~-------- 793 (964)
++.. ....+..++||+|++|..+.. . ++.. . ..+ . .|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 122456789999999864321 1 1111 0 000 1 1221110
Q ss_pred ----HHHHHHHHHHHHhhC----CCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 794 ----VIKGVAHALSYMHHE----CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 794 ----i~~~i~~~l~~LH~~----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
+...+.+.+++++.. ...+++|+|+++.||+++.++.+.+.||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455555532 23479999999999999887666899998774
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0088 Score=63.71 Aligned_cols=138 Identities=14% Similarity=0.099 Sum_probs=73.7
Q ss_pred ccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCce-eeEEeeeecCceeEEEEEec-c
Q 037111 693 ESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNI-VKFYGFCSHARHSFLVYEYL-E 770 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~ 770 (964)
-.+.|+.|....+|+. +.+++|+........ ....+|+..++.+....+ .++++++ .+.-++|+||+ +
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~---~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY---INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAG 91 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC----C---CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTT
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCccce---eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCC
Confidence 3678999999999999 568899875321111 112356666655532122 4555554 33347899999 5
Q ss_pred CCCHHHH---------------h---hhcCC---CCCC-HHHHHHHHHH--------------HHHHH----HHHhh-CC
Q 037111 771 RGSLARI---------------L---SSETA---TEMD-WSKRVNVIKG--------------VAHAL----SYMHH-EC 809 (964)
Q Consensus 771 ~gsL~~~---------------l---~~~~~---~~l~-~~~~~~i~~~--------------i~~~l----~~LH~-~~ 809 (964)
|.++... + +.... .... +..+..+... +.+.+ +.+.. ..
T Consensus 92 g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 171 (301)
T 3dxq_A 92 AQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL 171 (301)
T ss_dssp CEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred CccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 5444210 0 11110 0001 1111111110 11111 11111 12
Q ss_pred CCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 810 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
...++|+|+.+.||+ ..++.+.++||..+..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 345899999999999 5677889999998764
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0038 Score=68.51 Aligned_cols=140 Identities=14% Similarity=0.195 Sum_probs=82.9
Q ss_pred cceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEE
Q 037111 694 SFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 764 (964)
.+.+..|-...+|++... +++.|++|+.... ......+.+|..+++.+. +.-..++++++.+ .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 356777888899999875 2478999985321 122345668888887774 3334677777654 29
Q ss_pred EEEeccCCCHHH--------------Hh---hhcC---CCCCC--HHHHHHHHHHHHH-------------------HHH
Q 037111 765 VYEYLERGSLAR--------------IL---SSET---ATEMD--WSKRVNVIKGVAH-------------------ALS 803 (964)
Q Consensus 765 v~e~~~~gsL~~--------------~l---~~~~---~~~l~--~~~~~~i~~~i~~-------------------~l~ 803 (964)
||||++|.++.. .+ +... ..... +.++.++..++.. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 999999865431 11 1110 11122 3455555544322 223
Q ss_pred HH----hhC-CCCCeEeccCCCCCeEECCC----CceEEeccCccc
Q 037111 804 YM----HHE-CRPPIVHRDVSSKNVLLDFE----YEAHVSDFGTAK 840 (964)
Q Consensus 804 ~L----H~~-~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~ 840 (964)
.| ... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 33 221 23468999999999999876 789999999875
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0016 Score=59.60 Aligned_cols=56 Identities=21% Similarity=0.278 Sum_probs=34.7
Q ss_pred eecCCccccC-ccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCC
Q 037111 495 YLNMSSNEFS-QEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 495 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
.++.+++.++ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4556666664 13343322 35677777777777555556677777777777777775
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.005 Score=69.15 Aligned_cols=72 Identities=17% Similarity=0.152 Sum_probs=48.6
Q ss_pred cceeecCCceeEEEEEeCC--------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEE
Q 037111 694 SFCIGRGGYGSVYKAELPS--------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 764 (964)
.+.|+.|....||++...+ ++.|++|+.... . ....+..|..+++.+. +.-..++++.+.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~---~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-E---TESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-C---CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-C---cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4568889899999998753 578999987421 1 1134557888887774 3223667776643 38
Q ss_pred EEEeccCCC
Q 037111 765 VYEYLERGS 773 (964)
Q Consensus 765 v~e~~~~gs 773 (964)
|+||++|.+
T Consensus 150 v~e~l~G~~ 158 (429)
T 1nw1_A 150 LEEYIPSRP 158 (429)
T ss_dssp EECCCCEEE
T ss_pred EEEEeCCcc
Confidence 999998743
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.014 Score=65.92 Aligned_cols=74 Identities=19% Similarity=0.090 Sum_probs=46.3
Q ss_pred cceeecCCceeEEEEEeCC-CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc-eeeEEeeeecCceeEEEEEeccC
Q 037111 694 SFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN-IVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
.+.|+.|-...+|++...+ ++.|++|+......... .-.+|..+++.+...+ ..++++++.. ..||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i---dR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII---NREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS---CHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc---CHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCC
Confidence 4568889899999998764 47788888643211111 1146878777775333 3577777732 359999987
Q ss_pred CCH
Q 037111 772 GSL 774 (964)
Q Consensus 772 gsL 774 (964)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 543
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.04 Score=59.68 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=28.0
Q ss_pred CCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 810 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
...++|+|+.+.||+++.++.+.+.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34799999999999999888899999987754
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=95.57 E-value=0.062 Score=52.76 Aligned_cols=100 Identities=19% Similarity=0.173 Sum_probs=65.3
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccc
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 852 (964)
+|.+.|...+ .++++++++.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 34 SLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc------------
Confidence 8999997654 569999999999999999877622100 1 1222357899999999988764 1110
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHhCC
Q 037111 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ 889 (964)
Q Consensus 853 ~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~ 889 (964)
.....+.|||... ...+.+.=|||+|+++|.-+-=.
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDyg 133 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYG 133 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTT
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcC
Confidence 1122466888763 34678899999999999998533
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=95.45 E-value=0.039 Score=60.57 Aligned_cols=74 Identities=12% Similarity=0.076 Sum_probs=42.2
Q ss_pred cceeecCCceeEEEEEeCC---------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc-eeeEEeeeecCceeE
Q 037111 694 SFCIGRGGYGSVYKAELPS---------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN-IVKFYGFCSHARHSF 763 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~ 763 (964)
...++.|....+|+....+ ++.|++|+...... .......|...++.+.... +.++++.+. -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD---ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG---GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc---ceecHHHHHHHHHHHHhcCCCCceEEecC----Cc
Confidence 3467788888999997653 26888887643211 1112346777766664222 446665542 36
Q ss_pred EEEEeccCCCH
Q 037111 764 LVYEYLERGSL 774 (964)
Q Consensus 764 lv~e~~~~gsL 774 (964)
+||||++|.++
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.11 Score=57.61 Aligned_cols=140 Identities=8% Similarity=0.076 Sum_probs=82.2
Q ss_pred cceeecCCceeEEEEEeCC--------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEE
Q 037111 694 SFCIGRGGYGSVYKAELPS--------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 764 (964)
.+.+..|-...+|+....+ ++.|++|+........ ....+|..+++.+. +.-..++++.+. -+.
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~---idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF---YDSKVELDVFRYLSNINIAPNIIADFP----EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC---CCHHHHHHHHHHHHHTTSSCCEEEEET----TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh---cCHHHHHHHHHHHHhcCCCCCEEEEcC----CCE
Confidence 4567778888999998753 5789999864321111 12245777766663 333456665442 378
Q ss_pred EEEeccCCCHHH--------------Hh---hh--c---------CCCCCCHHHHHHHHHHH------------------
Q 037111 765 VYEYLERGSLAR--------------IL---SS--E---------TATEMDWSKRVNVIKGV------------------ 798 (964)
Q Consensus 765 v~e~~~~gsL~~--------------~l---~~--~---------~~~~l~~~~~~~i~~~i------------------ 798 (964)
||||++|.++.. .+ +. . ...+.-+.++.++..++
T Consensus 148 I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 227 (424)
T 3mes_A 148 IEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSK 227 (424)
T ss_dssp EEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHH
T ss_pred EEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHH
Confidence 999999865321 01 11 0 11111244444443322
Q ss_pred -HHHHHHHhh---------------------CCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 799 -AHALSYMHH---------------------ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 799 -~~~l~~LH~---------------------~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
...+++|.. .....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 228 l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 228 ILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 122333321 11346899999999999 7888999999998753
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=89.50 E-value=0.94 Score=49.98 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=24.9
Q ss_pred CeEeccCCCCCeEE------CCCCceEEeccCcccc
Q 037111 812 PIVHRDVSSKNVLL------DFEYEAHVSDFGTAKL 841 (964)
Q Consensus 812 ~iiH~dlkp~Nill------~~~~~~kl~Dfg~a~~ 841 (964)
.++|+|+.+.||++ +++..+.++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998753
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=83.69 E-value=2.7 Score=41.13 Aligned_cols=124 Identities=6% Similarity=0.053 Sum_probs=83.1
Q ss_pred HHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEec
Q 037111 737 EIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816 (964)
Q Consensus 737 E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~ 816 (964)
|+..+.. .||+.++. .+-.+++.+.+.++.-+ +..+|-. -...+...+++++.+|+...+++++. +|-
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf 103 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN---IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTF 103 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG---GGGSCHHHHHHHHHHGGGGGGGGGSS-----EEC
T ss_pred HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH---HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEE
Confidence 4444443 68988877 45556666666555543 3333321 22367788999999999988666644 788
Q ss_pred cCCCCCeEECCCCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 817 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
-++|+|++++.++.+++.-.|+-..+.+ . ..+...=.-.+=+++..+++++..|+.
T Consensus 104 ~L~P~NL~f~~~~~p~i~~RGik~~l~P-----------------~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 104 VLAPDELFFTRDGLPIAKTRGLQNVVDP-----------------L-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp CCSGGGEEECTTSCEEESCCEETTTBSC-----------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEecceEEEcCCCCEEEEEccCccCCCC-----------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 8999999999999999988776543322 1 122223344677888899999888764
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=82.09 E-value=0.17 Score=57.10 Aligned_cols=62 Identities=8% Similarity=-0.040 Sum_probs=17.4
Q ss_pred ccceeecCCceeEEEEEeCC-CCeEEE------EEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee
Q 037111 693 ESFCIGRGGYGSVYKAELPS-GDTVAV------KKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS 757 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 757 (964)
..+.+| ||.||+|.+.. ..+||| |+.+......+....+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345566 99999998753 367888 776543334444567888999999999999999987754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 964 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 3e-61 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-58 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 9e-57 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-56 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-55 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-54 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-54 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-54 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-54 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 6e-54 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-52 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-52 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 4e-52 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-52 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-52 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 6e-52 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-51 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 3e-51 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 4e-51 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-50 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 7e-50 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-49 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 4e-49 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 5e-49 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 6e-49 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-48 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 5e-48 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-47 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-46 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-46 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 9e-45 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 9e-45 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-44 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-44 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-44 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-44 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-44 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-43 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-43 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 4e-42 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 6e-42 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 6e-41 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 6e-41 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 3e-40 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-40 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-39 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-39 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-39 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 5e-39 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-38 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 5e-38 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 4e-37 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 5e-37 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 7e-37 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-36 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-36 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 9e-34 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 6e-32 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-31 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-30 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-23 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-23 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-08 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 4e-30 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 9e-30 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-24 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 5e-17 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 6e-17 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-06 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 7e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 4e-23 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-22 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-22 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 4e-20 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-17 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 9e-17 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-08 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 6e-21 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-20 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-19 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 7e-17 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-14 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-11 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 9e-09 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 5e-19 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-16 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 4e-12 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 7e-12 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 9e-08 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 3e-07 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-06 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.001 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-13 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 6e-13 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 6e-07 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-06 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 3e-05 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 0.001 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 5e-13 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 8e-09 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 5e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-10 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 4e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 4e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 8e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 5e-10 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 3e-08 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-08 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 5e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 5e-06 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 3e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 6e-04 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 4e-09 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 6e-07 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 1e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 1e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 2e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 4e-09 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 4e-07 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 1e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.002 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.003 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 4e-08 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 2e-05 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 6e-05 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 5e-08 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 3e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.004 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 9e-07 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 6e-06 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 6e-05 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 3e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 7e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.002 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.003 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 2e-05 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 2e-04 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 3e-04 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 0.003 | |
| d1m9la_ | 198 | c.10.3.1 (A:) Outer arm dynein light chain 1 {Gree | 3e-05 | |
| d1m9la_ | 198 | c.10.3.1 (A:) Outer arm dynein light chain 1 {Gree | 6e-04 | |
| d1m9la_ | 198 | c.10.3.1 (A:) Outer arm dynein light chain 1 {Gree | 0.004 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 9e-05 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 5e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.002 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 2e-04 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 4e-04 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 0.001 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 0.004 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 207 bits (528), Expect = 3e-61
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 23/270 (8%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG G +G+VYK + VAVK L+ + F +E+ L RH NI+ F G+
Sbjct: 16 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ +V ++ E SL L T+ + K +++ + A + Y+H I+HR
Sbjct: 74 TA-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHA---KSIIHR 128
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMK---VTE 871
D+ S N+ L + + DFG A + S + + +L+G+ ++APE+ +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 872 KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVED 931
+ DVY+FG++ E++ GQ P N + I M P L +
Sbjct: 189 QSDVYAFGIVLYELMTGQLP-----------YSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 932 KLKSIIEVALSCVDANPERRPNMQIVCKLL 961
K++ + C+ + RP + +
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILASI 267
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 200 bits (509), Expect = 1e-58
Identities = 57/266 (21%), Positives = 112/266 (42%), Gaps = 23/266 (8%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G G +G V+ VAVK L + FL+E + ++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ +++ EY+E GSL L + + ++ +K +++ +A ++++ +HR
Sbjct: 78 TQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE-LAGTYGYVAPELAYTMKVTEKCDV 875
D+ + N+L+ ++DFG A+L++ + E + APE T K DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 876 YSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKS 935
+SFG+L E++ PG E I ++ ++ +
Sbjct: 194 WSFGILLTEIVTHGRIPY----------PGMTNPEVIQNLERGYRMVRP-----DNCPEE 238
Query: 936 IIEVALSCVDANPERRPNMQIVCKLL 961
+ ++ C PE RP + +L
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVL 264
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 194 bits (495), Expect = 9e-57
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 23/273 (8%)
Query: 690 NFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN 748
+++ + IG G YG K G + K+L + ++ +SE+ L ++H N
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 749 IVKFYGFCSHARHS--FLVYEYLERGSLARILSSETATE--MDWSKRVNVIKGVAHALSY 804
IV++Y ++ ++V EY E G LA +++ T +D + V+ + AL
Sbjct: 65 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 124
Query: 805 MH--HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE 862
H + ++HRD+ NV LD + + DFG A++L D+S GT Y++PE
Sbjct: 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE 184
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922
M EK D++S G L E+ P + E + + +
Sbjct: 185 QMNRMSYNEKSDIWSLGCLLYELCALMPP-----------FTAFSQKELAGKIREGKFRR 233
Query: 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
D+L II ++ RP+++
Sbjct: 234 IPYR--YSDELNEIIT---RMLNLKDYHRPSVE 261
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (490), Expect = 3e-56
Identities = 55/275 (20%), Positives = 106/275 (38%), Gaps = 23/275 (8%)
Query: 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN 748
+ IG G +G V+ + D VA+K + +++F+ E + + + H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMSEEDFIEEAEVMMKLSHPK 61
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
+V+ YG C LV+E++E G L+ L ++ + + V + +
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM---AYL 117
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE-LAGTYGYVAPELAYTM 867
++HRD++++N L+ VSDFG + + D S + +PE+
Sbjct: 118 EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
+ + K DV+SFGVL EV + +E ++ +
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKI----------PYENRSNSEVVEDISTGFRLYKPRLA 227
Query: 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ ++ C PE RP + + L+
Sbjct: 228 STH-----VYQIMNHCWKERPEDRPAFSRLLRQLA 257
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (488), Expect = 1e-55
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
+G+G +G V+ VA+K L T + FL E + + +RH +V+ Y
Sbjct: 25 LGQGCFGEVWMGTWNGTTRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 81
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
S ++V EY+ +GSL L ET + + V++ +A ++Y+ VHR
Sbjct: 82 SE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHR 137
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE-LAGTYGYVAPELAYTMKVTEKCDV 875
D+ + N+L+ V+DFG A+L++ + + + APE A + T K DV
Sbjct: 138 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 197
Query: 876 YSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKS 935
+SFG+L E+ PG E +D + P E +S
Sbjct: 198 WSFGILLTELTTKGRVPY----------PGMVNREVLDQVERGYRMPCPPEC-----PES 242
Query: 936 IIEVALSCVDANPERRPNMQIVCKLL 961
+ ++ C PE RP + + L
Sbjct: 243 LHDLMCQCWRKEPEERPTFEYLQAFL 268
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 189 bits (482), Expect = 1e-54
Identities = 65/300 (21%), Positives = 125/300 (41%), Gaps = 40/300 (13%)
Query: 681 YEEIIRSINNFDESF---------CIGRGGYGSVYKAELPSGD----TVAVKKLHSFTGE 727
+E+ ++ F + IG G +G V L VA+K L S E
Sbjct: 9 FEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE 68
Query: 728 TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMD 787
+++FLSE + H N++ G + + ++ E++E GSL + +
Sbjct: 69 K-QRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFT 126
Query: 788 WSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847
+ V +++G+A + Y+ VHRD++++N+L++ VSDFG ++ L+ D+S
Sbjct: 127 VIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 183
Query: 848 NWSELA-----GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDS 901
+ + + + APE K T DV+S+G++ EV+ G+ P
Sbjct: 184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---------- 233
Query: 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+ I+ + PP ++ ++ ++ L C + RP + L
Sbjct: 234 -YWDMTNQDVINAIEQDYRLPPPMDC-----PSALHQLMLDCWQKDRNHRPKFGQIVNTL 287
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 188 bits (479), Expect = 1e-54
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 27/276 (9%)
Query: 687 SINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH 746
++ IG+G +G V + G+ VAVK + + + FL+E +T +RH
Sbjct: 5 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKN----DATAQAFLAEASVMTQLRH 59
Query: 747 RNIVKFYGFCSHARHS-FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYM 805
N+V+ G + ++V EY+ +GSL L S + + + V A+ Y+
Sbjct: 60 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 119
Query: 806 HHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY 865
VHRD++++NVL+ + A VSDFG K SS + APE
Sbjct: 120 E---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALR 173
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925
K + K DV+SFG+L E+ P + + + +
Sbjct: 174 EKKFSTKSDVWSFGILLWEIYSFGRVPY----------PRIPLKDVVPRVEKGYKMDAP- 222
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+ ++ EV +C + RP+ + + L
Sbjct: 223 ----DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 254
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (483), Expect = 1e-54
Identities = 65/299 (21%), Positives = 119/299 (39%), Gaps = 43/299 (14%)
Query: 689 NNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR 747
++F++ +G G G V+K PSG +A K +H + + + E++ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI-RNQIIRELQVLHECNSP 64
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH 807
IV FYG + E+++ GSL ++L + V V L+Y+
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLRE 122
Query: 808 ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
+ + I+HRDV N+L++ E + DFG + L +N GT Y++PE
Sbjct: 123 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGT 178
Query: 868 KVTEKCDVYSFGVLALEVIKGQHP-------------------------------KDLLS 896
+ + D++S G+ +E+ G++P LS
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238
Query: 897 SLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
S S P + E +D++ + PP + + + C+ NP R +++
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEP-PPKLPSGVFSLEFQDFVN---KCLIKNPAERADLK 293
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (475), Expect = 3e-54
Identities = 61/277 (22%), Positives = 112/277 (40%), Gaps = 28/277 (10%)
Query: 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN 748
+ +G G +G V + VA+K + + + EF+ E K + + H
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMSEDEFIEEAKVMMNLSHEK 60
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
+V+ YG C+ R F++ EY+ G L L + + + K V A+ Y+
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLES- 118
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE-LAGTYGYVAPELAYTM 867
+HRD++++N L++ + VSDFG ++ + D S + PE+
Sbjct: 119 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 868 KVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWL 925
K + K D+++FGVL E+ G+ P +E +H+ RL P
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMP-----------YERFTNSETAEHIAQGLRLYRP-- 223
Query: 926 EVGVEDKLKSIIEVALSCVDANPERRPNM-QIVCKLL 961
+ + + SC + RP ++ +L
Sbjct: 224 ----HLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 186 bits (474), Expect = 6e-54
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 26/271 (9%)
Query: 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGV 744
++ +F+ +G+G +G+VY A S +A+K L + + + + E++ + +
Sbjct: 4 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 63
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY 804
RH NI++ YG+ A +L+ EY G++ R L + + D + I +A+ALSY
Sbjct: 64 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSY 121
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
H ++HRD+ +N+LL E ++DFG + SS + L GT Y+ PE+
Sbjct: 122 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA--PSSRRTTLCGTLDYLPPEMI 176
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924
EK D++S GVL E + G+ P E + P
Sbjct: 177 EGRMHDEKVDLWSLGVLCYEFLVGKPP-----------FEANTYQETYKRISRVEFTFP- 224
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
V + + +I + NP +RP ++
Sbjct: 225 --DFVTEGARDLIS---RLLKHNPSQRPMLR 250
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (464), Expect = 1e-52
Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 697 IGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IGRG + +VYK + VA +L + ++ F E + L G++H NIV+FY
Sbjct: 17 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 76
Query: 756 CSHA----RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
+ LV E + G+L L M + + + L ++H P
Sbjct: 77 WESTVKGKKCIVLVTELMTSGTLKTYLKRFKV--MKIKVLRSWCRQILKGLQFLHTRT-P 133
Query: 812 PIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT 870
PI+HRD+ N+ + + D G A L + + + GT ++APE+ Y K
Sbjct: 134 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK--AVIGTPEFMAPEM-YEEKYD 190
Query: 871 EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVE 930
E DVY+FG+ LE+ ++P I + + P +
Sbjct: 191 ESVDVYAFGMCMLEMATSEYP-----------YSECQNAAQIYRRVTSGVKPASFDKVAI 239
Query: 931 DKLKSIIEVALSCVDANPERRPNMQ 955
++K IIE C+ N + R +++
Sbjct: 240 PEVKEIIE---GCIRQNKDERYSIK 261
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 181 bits (461), Expect = 4e-52
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 29/272 (10%)
Query: 697 IGRGGYGSVYKAELPSGDT---VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
+G G +G+V K VAVK L + + + E L+E + + + IV+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
G C LV E E G L + L + + ++ V+ + Y+
Sbjct: 75 GICEA-ESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---F 128
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS---ELAGTYGYVAPELAYTMKVT 870
VHRD++++NVLL ++ A +SDFG +K L+ D + + + APE K +
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 871 EKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929
K DV+SFGVL E GQ P G +E +
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKP-----------YRGMKGSEVTAMLEKGERMGCP----- 232
Query: 930 EDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+ + ++ C + E RP V L
Sbjct: 233 AGCPREMYDLMNLCWTYDVENRPGFAAVELRL 264
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (463), Expect = 4e-52
Identities = 63/291 (21%), Positives = 112/291 (38%), Gaps = 31/291 (10%)
Query: 696 CIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG+G +G V++ + G+ VAVK S +EI +RH NI+ F
Sbjct: 10 SIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 756 CSHARHS----FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC-- 809
+ + +LV +Y E GSL L+ T + + + A L+++H E
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 810 ---RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS----ELAGTYGYVAPE 862
+P I HRD+ SKN+L+ ++D G A + GT Y+APE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 863 LAYTM------KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916
+ + ++ D+Y+ G++ E+ + + + +++ M
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 242
Query: 917 DARL-----PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
P + L+ + ++ C AN R + K LS
Sbjct: 243 KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (462), Expect = 4e-52
Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 29/272 (10%)
Query: 697 IGRGGYGSVYKAELPSGDT---VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFY 753
+G G +GSV + VA+K L T E +E + E + + + + IV+
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLI 75
Query: 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPI 813
G C A LV E G L + L + E+ S ++ V+ + Y+
Sbjct: 76 GVC-QAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEE---KNF 130
Query: 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE---LAGTYGYVAPELAYTMKVT 870
VHRD++++NVLL + A +SDFG +K L D S ++ + APE K +
Sbjct: 131 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 190
Query: 871 EKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929
+ DV+S+GV E + GQ P E + + + E
Sbjct: 191 SRSDVWSYGVTMWEALSYGQKP-----------YKKMKGPEVMAFIEQGKRMECPPEC-- 237
Query: 930 EDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+ + C E RP+ V + +
Sbjct: 238 ---PPELYALMSDCWIYKWEDRPDFLTVEQRM 266
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 182 bits (462), Expect = 5e-52
Identities = 65/284 (22%), Positives = 124/284 (43%), Gaps = 25/284 (8%)
Query: 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIK 739
Y++ + +G G YG VY+ TVAVK L +T +EFL E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAA 65
Query: 740 ALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVA 799
+ ++H N+V+ G C+ +++ E++ G+L L E+ + + ++
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 125
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN-WSELAGTYGY 858
A+ Y+ + +HRD++++N L+ + V+DFG ++L+ D+ + +
Sbjct: 126 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 859 VAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF-D 917
APE K + K DV++FGVL E+ PG ++++ + + D
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------PGIDLSQVYELLEKD 232
Query: 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
R+ P E + + E+ +C NP RP+ + +
Sbjct: 233 YRMERP------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (462), Expect = 6e-52
Identities = 66/285 (23%), Positives = 130/285 (45%), Gaps = 33/285 (11%)
Query: 682 EEIIR------SINNFDESF----CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTH 730
EEI+ S+ + + + IG+G G+VY A ++ +G VA+++++ +
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPK 60
Query: 731 QKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSK 790
++ ++EI + ++ NIV + ++V EYL GSL +++ MD +
Sbjct: 61 KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQ 117
Query: 791 RVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850
V + AL ++H ++HRD+ S N+LL + ++DFG + P+ S S
Sbjct: 118 IAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174
Query: 851 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910
+ GT ++APE+ K D++S G++A+E+I+G+ P N
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP-----------YLNENPLR 223
Query: 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
A+ + P + + + C+D + E+R + +
Sbjct: 224 ALYLIATNGTPELQNPEKLSAIFRDFLN---RCLDMDVEKRGSAK 265
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 181 bits (460), Expect = 1e-51
Identities = 66/314 (21%), Positives = 121/314 (38%), Gaps = 51/314 (16%)
Query: 678 KLVYEEIIRSINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQ 731
KL+ E R NN + IG G +G V++A P VAVK L Q
Sbjct: 4 KLLSLEYPR--NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKE-EASADMQ 60
Query: 732 KEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL------------- 778
+F E + + NIVK G C+ + L++EY+ G L L
Sbjct: 61 ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120
Query: 779 ---------SSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829
SS + ++++ + + VA ++Y+ VHRD++++N L+
Sbjct: 121 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENM 177
Query: 830 EAHVSDFGTAKLLKPDSSNWSE--LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK 887
++DFG ++ + ++ A ++ PE + + T + DV+++GV+ E+
Sbjct: 178 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 237
Query: 888 GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDAN 947
G E I ++ D + E+ + + C
Sbjct: 238 YGLQPY----------YGMAHEEVIYYVRDGNILACP-----ENCPLELYNLMRLCWSKL 282
Query: 948 PERRPNMQIVCKLL 961
P RP+ + ++L
Sbjct: 283 PADRPSFCSIHRIL 296
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (457), Expect = 3e-51
Identities = 58/284 (20%), Positives = 113/284 (39%), Gaps = 29/284 (10%)
Query: 681 YEEIIRSIN---NFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLS 736
YE + R +N ++ +G G +G VYKA+ + A K + + + E ++++
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMV 58
Query: 737 EIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIK 796
EI L H NIVK + + +++ E+ G++ ++ + S+ V K
Sbjct: 59 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCK 117
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY 856
AL+Y+H I+HRD+ + N+L + + ++DFG + GT
Sbjct: 118 QTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP 174
Query: 857 GYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911
++APE+ K DV+S G+ +E+ + + P N
Sbjct: 175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP-----------HHELNPMRV 223
Query: 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ + + P K ++ C++ N + R
Sbjct: 224 LLKIAKSEPPTLAQPSRWSSNFKDFLK---KCLEKNVDARWTTS 264
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (454), Expect = 4e-51
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 28/283 (9%)
Query: 689 NNFDESFCIGRGGYGSVYKAELPSGD-----TVAVKKLHSFTGETTHQKEFLSEIKALTG 743
+ IG G +G VYK L + VA+K L + E + +FL E +
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK-QRVDFLGEAGIMGQ 65
Query: 744 VRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALS 803
H NI++ G S + ++ EY+E G+L + E E + V +++G+A
Sbjct: 66 FSHHNIIRLEGVISKYKPMMIITEYMENGALDKF-LREKDGEFSVLQLVGMLRGIAAG-- 122
Query: 804 YMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW---SELAGTYGYVA 860
M + VHRD++++N+L++ VSDFG +++L+ D S + A
Sbjct: 123 -MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181
Query: 861 PELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920
PE K T DV+SFG++ EV+ + +E + + D
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPY----------WELSNHEVMKAINDGFR 231
Query: 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963
P ++ +I ++ + C RRP + +L
Sbjct: 232 LPTPMDC-----PSAIYQLMMQCWQQERARRPKFADIVSILDK 269
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 177 bits (450), Expect = 3e-50
Identities = 66/288 (22%), Positives = 128/288 (44%), Gaps = 31/288 (10%)
Query: 677 GKLVYEEIIRSINNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLH-SFTGETTHQKEF 734
+L +++ + F + IG G +G+VY A + + + VA+KK+ S ++
Sbjct: 5 AELFFKDDPEKL--FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI 62
Query: 735 LSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNV 794
+ E++ L +RH N +++ G ++LV EY + + + + + V
Sbjct: 63 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAV 120
Query: 795 IKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG 854
G L+Y+H ++HRDV + N+LL + DFG+A ++ P +S G
Sbjct: 121 THGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS----FVG 173
Query: 855 TYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911
T ++APE+ M + K DV+S G+ +E+ + + P L N A
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP-----------LFNMNAMSA 222
Query: 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959
+ H+ P + ++ ++ SC+ P+ RP +++ K
Sbjct: 223 LYHIAQNESPAL-QSGHWSEYFRNFVD---SCLQKIPQDRPTSEVLLK 266
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 177 bits (449), Expect = 7e-50
Identities = 72/343 (20%), Positives = 127/343 (37%), Gaps = 53/343 (15%)
Query: 653 KKDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPS 712
+ + ++ N + YE L +E N + +G G +G V A
Sbjct: 4 QLQMVQVTGSSDNEYFYVDFREYEYDLKWE---FPRENLEFGKVLGSGAFGKVMNATAYG 60
Query: 713 GD------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLV 765
VAVK L +++ ++ +SE+K +T + H NIV G C+ + +L+
Sbjct: 61 ISKTGVSIQVAVKMLKE-KADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI 119
Query: 766 YEYLERGSLARILSS---------------------ETATEMDWSKRVNVIKGVAHALSY 804
+EY G L L S E + + + VA + +
Sbjct: 120 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF 179
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPE 862
+ VHRD++++NVL+ + DFG A+ + DS+ ++APE
Sbjct: 180 LEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE 236
Query: 863 LAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921
+ T K DV+S+G+L E+ G +P PG ++ +
Sbjct: 237 SLFEGIYTIKSDVWSYGILLWEIFSLGVNP-----------YPGIPVDANFYKLIQNGFK 285
Query: 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964
E+ I + SC + +RP+ + L Q
Sbjct: 286 MDQPFYATEE----IYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 324
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 175 bits (445), Expect = 2e-49
Identities = 74/286 (25%), Positives = 113/286 (39%), Gaps = 31/286 (10%)
Query: 686 RSINNFDESFCIGRGGYGSVYKAELPSGDT----VAVKKLHSFTGETTHQKEFLSEIKAL 741
I +F+E IGRG +G VY L D AVK L+ T +FL+E +
Sbjct: 26 SLIVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIM 82
Query: 742 TGVRHRNIVKFYGFCSHARHS-FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH 800
H N++ G C + S +V Y++ G L + +ET + VA
Sbjct: 83 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAK 141
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS----SNWSELAGTY 856
M VHRD++++N +LD ++ V+DFG A+ + N +
Sbjct: 142 G---MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 198
Query: 857 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916
++A E T K T K DV+SFGVL E++ P P N + ++
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY----------PDVNTFDITVYLL 248
Query: 917 DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
R E + EV L C E RP+ + +S
Sbjct: 249 QGRRLLQP-----EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 289
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (441), Expect = 4e-49
Identities = 58/294 (19%), Positives = 109/294 (37%), Gaps = 38/294 (12%)
Query: 687 SINNFDESFCIGRGGYGSVYKAELPSGDT---VAVKKLHSFTGETTHQKEFLSEIKALTG 743
N+ IG G +G V KA + A+K++ + ++F E++ L
Sbjct: 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCK 66
Query: 744 V-RHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL--------------SSETATEMDW 788
+ H NI+ G C H + +L EY G+L L ++ TA+ +
Sbjct: 67 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 126
Query: 789 SKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848
+ ++ VA M + + +HRD++++N+L+ Y A ++DFG ++ +
Sbjct: 127 QQLLHFAADVARG---MDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 183
Query: 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANM 908
++A E T DV+S+GVL E++ G
Sbjct: 184 TM-GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT----------PYCGMTC 232
Query: 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
E + + L + ++ C P RP+ + L+
Sbjct: 233 AELYEKLPQGYRLEKPLNC-----DDEVYDLMRQCWREKPYERPSFAQILVSLN 281
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (441), Expect = 5e-49
Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 43/293 (14%)
Query: 697 IGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNI 749
+G G +G V +A + TVAVK L T ++ +SE+K L+ + H NI
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREALMSELKVLSYLGNHMNI 89
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARIL----------------SSETATEMDWSKRVN 793
V G C+ + ++ EY G L L + +D ++
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 794 VIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW--SE 851
VA ++++ + +HRD++++N+LL + DFG A+ +K DS+
Sbjct: 150 FSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911
++APE + T + DV+S+G+ E+ PG ++
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY----------PGMPVDSK 256
Query: 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964
M E + ++ +C DA+P +RP + + +L+ Q
Sbjct: 257 FYKMIKEGFRMLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (438), Expect = 6e-49
Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 24/272 (8%)
Query: 688 INNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH 746
+ ++D +G G YG V A + + VAVK + + EI + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLNH 62
Query: 747 RNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH 806
N+VKFYG +L EY G L + + M + + Y+H
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLH 120
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELA 864
I HRD+ +N+LLD +SDFG A + + ++ +++ GT YVAPEL
Sbjct: 121 GIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 865 YTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923
+ E DV+S G++ ++ G+ P D P + E D P
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWD---------QPSDSCQEYSDWKEKKTYLNP 228
Query: 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
W + ++ +++ + NP R +
Sbjct: 229 WKK--IDSAPLALLH---KILVENPSARITIP 255
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 174 bits (441), Expect = 2e-48
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 25/272 (9%)
Query: 688 INNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH 746
++++D +G G +G V++ E +G+ A K + T + ++ EI+ ++ +RH
Sbjct: 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM--TPHESDKETVRKEIQTMSVLRH 82
Query: 747 RNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH 806
+V + ++YE++ G L ++ E +M + V ++ V L +MH
Sbjct: 83 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMH 141
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
VH D+ +N++ + + DFG L P S GT + APE+A
Sbjct: 142 ENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT-TGTAEFAAPEVA 197
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924
V D++S GVL+ ++ G P G N +E + ++
Sbjct: 198 EGKPVGYYTDMWSVGVLSYILLSGLSP-----------FGGENDDETLRNVKSCDWNMDD 246
Query: 925 LEV-GVEDKLKSIIEVALSCVDANPERRPNMQ 955
G+ + K I + A+P R +
Sbjct: 247 SAFSGISEDGKDFIR---KLLLADPNTRMTIH 275
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 172 bits (438), Expect = 5e-48
Identities = 52/263 (19%), Positives = 102/263 (38%), Gaps = 25/263 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+G G +G V++ E +G K +++ + +EI + + H ++ +
Sbjct: 37 LGSGAFGVVHRCVEKATGRVFVAKFINT--PYPLDKYTVKNEISIMNQLHHPKLINLHDA 94
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
L+ E+L G L +++E M ++ +N ++ L +MH IVH
Sbjct: 95 FEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMH---EHSIVH 150
Query: 816 RDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC 873
D+ +N++ + + + V DFG A L PD T + APE+ V
Sbjct: 151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT-TATAEFAAPEIVDREPVGFYT 209
Query: 874 DVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV-GVEDK 932
D+++ GVL ++ G P G + E + ++ V +
Sbjct: 210 DMWAIGVLGYVLLSGLSP-----------FAGEDDLETLQNVKRCDWEFDEDAFSSVSPE 258
Query: 933 LKSIIEVALSCVDANPERRPNMQ 955
K I+ + + P +R +
Sbjct: 259 AKDFIK---NLLQKEPRKRLTVH 278
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 168 bits (427), Expect = 2e-47
Identities = 62/274 (22%), Positives = 103/274 (37%), Gaps = 29/274 (10%)
Query: 697 IGRGGYGSVYKAELPSGD----TVAVKKLH-SFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G +G V + E + +VAVK L + +F+ E+ A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
YG +V E GSL L VA + Y+ +
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKR-- 131
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW---SELAGTYGYVAPELAYTMK 868
+HRD++++N+LL + DFG + L + ++ + + APE T
Sbjct: 132 -FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 869 VTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
+ D + FGV E+ GQ P G N ++ + + P
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEP-----------WIGLNGSQILHKIDKEGERLPR--- 236
Query: 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
ED + I V + C PE RP + L
Sbjct: 237 -PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 166 bits (421), Expect = 2e-46
Identities = 51/263 (19%), Positives = 99/263 (37%), Gaps = 26/263 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G G + +V A EL + A+K L + E ++ + H VK Y
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
+ Y + G L + + + + ++ A +S + + I+
Sbjct: 76 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALEYLHGKGII 130
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW--SELAGTYGYVAPELAYTMKVTEK 872
HRD+ +N+LL+ + ++DFGTAK+L P+S + GT YV+PEL +
Sbjct: 131 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS 190
Query: 873 CDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDK 932
D+++ G + +++ G P N + P K
Sbjct: 191 SDLWALGCIIYQLVAGLPP-----------FRAGNEYLIFQKIIKLEYDFP---EKFFPK 236
Query: 933 LKSIIEVALSCVDANPERRPNMQ 955
+ ++E + + +R +
Sbjct: 237 ARDLVE---KLLVLDATKRLGCE 256
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (417), Expect = 3e-46
Identities = 61/273 (22%), Positives = 113/273 (41%), Gaps = 28/273 (10%)
Query: 696 CIGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK 751
CIG G +G V++ S + VA+K + T ++ +++FL E + H +IVK
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS-VREKFLQEALTMRQFDHPHIVK 72
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
G + +++ E G L L + +D + + ++ AL+Y+
Sbjct: 73 LIGVITE-NPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLE---SK 127
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS-NWSELAGTYGYVAPELAYTMKVT 870
VHRD++++NVL+ + DFG ++ ++ + S+ ++APE + T
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 871 EKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGV 929
DV+ FGV E++ G P G N+ I + + P
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQ-----------GVKNNDVIGRIENGERLPMP----- 231
Query: 930 EDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ ++ + C +P RRP + LS
Sbjct: 232 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 264
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 162 bits (410), Expect = 9e-45
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 27/268 (10%)
Query: 687 SINNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGV 744
S+ +F +G G +G V+ +G A+K L + E L+ V
Sbjct: 2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 61
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY 804
H I++ +G A+ F++ +Y+E G L +L +K A
Sbjct: 62 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY-----AAEVCLA 116
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
+ + I++RD+ +N+LLD ++DFG AK + L GT Y+APE+
Sbjct: 117 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTYTLCGTPDYIAPEVV 173
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924
T + D +SFG+L E++ G P +N + + + +A L P
Sbjct: 174 STKPYNKSIDWWSFGILIYEMLAGYTP-----------FYDSNTMKTYEKILNAELRFP- 221
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRP 952
+ +K ++ + + +R
Sbjct: 222 --PFFNEDVKDLLS---RLITRDLSQRL 244
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 160 bits (406), Expect = 9e-45
Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 29/266 (10%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G GG V+ A L VAVK L + + F E + + H IV Y
Sbjct: 15 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 74
Query: 755 FCSHARHS----FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+ ++V EY++ +L I+ +E M + + VI AL++ +
Sbjct: 75 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFS---HQ 129
Query: 811 PPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSE---LAGTYGYVAPELAYTM 867
I+HRDV N+++ V DFG A+ + ++ ++ + GT Y++PE A
Sbjct: 130 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 189
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID-HMFDARLPPPWLE 926
V + DVYS G + EV+ G+ P G + H+ + +PP
Sbjct: 190 SVDARSDVYSLGCVLYEVLTGEPP-----------FTGDSPVSVAYQHVREDPIPPSARH 238
Query: 927 VGVEDKLKSIIEVALSCVDANPERRP 952
G+ L +++ + NPE R
Sbjct: 239 EGLSADLDAVVL---KALAKNPENRY 261
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (410), Expect = 1e-44
Identities = 63/271 (23%), Positives = 106/271 (39%), Gaps = 25/271 (9%)
Query: 688 INNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLH-SFTGETTHQKEFLSEIKALT-GV 744
I +F +G+G +G V+ AE + A+K L + + E + L+
Sbjct: 1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY 804
H + + + F V EYL G L + S + D S+ + L +
Sbjct: 61 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQF 118
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
+H + IV+RD+ N+LLD + ++DFG K + + GT Y+APE+
Sbjct: 119 LHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEIL 175
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924
K D +SFGVL E++ GQ P G + E + P
Sbjct: 176 LGQKYNHSVDWWSFGVLLYEMLIGQSP-----------FHGQDEEELFHSIRMDNPFYPR 224
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+E + K ++ PE+R ++
Sbjct: 225 ---WLEKEAKDLLV---KLFVREPEKRLGVR 249
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (410), Expect = 1e-44
Identities = 52/263 (19%), Positives = 103/263 (39%), Gaps = 26/263 (9%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
+GRG +G V++ E S T K + + T Q EI L RHRNI+ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKV---KGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+++E++ + +++ A E++ + V+ + V AL ++H I H
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLH---SHNIGH 125
Query: 816 RDVSSKNVLLDFEYEAHV--SDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKC 873
D+ +N++ + + +FG A+ LKP + L Y APE+ V+
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL-LFTAPEYYAPEVHQHDVVSTAT 184
Query: 874 DVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV-GVEDK 932
D++S G L ++ G +P + I+++ +A + +
Sbjct: 185 DMWSLGTLVYVLLSGINP-----------FLAETNQQIIENIMNAEYTFDEEAFKEISIE 233
Query: 933 LKSIIEVALSCVDANPERRPNMQ 955
++ + + R
Sbjct: 234 AMDFVD---RLLVKERKSRMTAS 253
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 161 bits (408), Expect = 2e-44
Identities = 57/262 (21%), Positives = 99/262 (37%), Gaps = 20/262 (7%)
Query: 696 CIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYG 754
+G G + V AE + VA+K + E + +EI L ++H NIV
Sbjct: 16 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-GKEGSMENEIAVLHKIKHPNIVALDD 74
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
H +L+ + + G L + + +I V A+ Y+H
Sbjct: 75 IYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRD 132
Query: 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCD 874
+ + LD + + +SDFG +K+ P S + GT GYVAPE+ ++ D
Sbjct: 133 LKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGTPGYVAPEVLAQKPYSKAVD 191
Query: 875 VYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW-LEVGVEDKL 933
+S GV+A ++ G P N + + + A + D
Sbjct: 192 CWSIGVIAYILLCGYPP-----------FYDENDAKLFEQILKAEYEFDSPYWDDISDSA 240
Query: 934 KSIIEVALSCVDANPERRPNMQ 955
K I ++ +PE+R +
Sbjct: 241 KDFIR---HLMEKDPEKRFTCE 259
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (406), Expect = 3e-44
Identities = 59/289 (20%), Positives = 110/289 (38%), Gaps = 32/289 (11%)
Query: 684 IIRSINN--FDESFCIGRGGYGSVYKAELPSGDT-----VAVKKLHSFTGETTHQKEFLS 736
++R + F + +G G +G+VYK VA+K+L T KE L
Sbjct: 2 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILD 60
Query: 737 EIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIK 796
E + V + ++ + G C + L+ + + G L + + +N
Sbjct: 61 EAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCV 118
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW--SELAG 854
+A ++Y+ +VHRD++++NVL+ ++DFG AKLL + +
Sbjct: 119 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 855 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGQHPKDLLSSLSDSSLPGANMNEAID 913
++A E T + DV+S+GV E++ G P D G +E
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPASEISS 224
Query: 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ P + + + C + + RP + + S
Sbjct: 225 ILEKGERLPQP-----PICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 160 bits (404), Expect = 4e-44
Identities = 53/298 (17%), Positives = 113/298 (37%), Gaps = 37/298 (12%)
Query: 683 EIIRSINNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLS 736
E+ R S +G+G +G VY+ VA+K ++ + EFL+
Sbjct: 16 EVAR--EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-AASMRERIEFLN 72
Query: 737 EIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARIL--------SSETATEMDW 788
E + ++V+ G S + + ++ E + RG L L ++
Sbjct: 73 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 132
Query: 789 SKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS- 847
SK + + +A ++Y++ VHRD++++N ++ ++ + DFG + +
Sbjct: 133 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 189
Query: 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGA 906
+ +++PE T DV+SFGV+ E+ G
Sbjct: 190 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY----------QGL 239
Query: 907 NMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964
+ + + + + L ++ + E+ C NP+ RP+ + + +
Sbjct: 240 SNEQVLRFVMEGGLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 292
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 158 bits (399), Expect = 1e-43
Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 24/275 (8%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756
IG G YG VYKA+ G+T A+KK+ + + EI L ++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 757 SHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816
+ LV+E+L++ + E E +K + L+ + + ++HR
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF-----LLQLLNGIAYCHDRRVLHR 124
Query: 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTMKVTEKCDV 875
D+ +N+L++ E E ++DFG A+ ++ T Y AP+ L + K + D+
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 876 YSFGVLALEVIKGQHP-------------KDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922
+S G + E++ G +L + + + P D F P
Sbjct: 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL 244
Query: 923 PWLEV--GVEDKLKSIIEVALSCVDANPERRPNMQ 955
PW G+++ ++ + +P +R +
Sbjct: 245 PWESFLKGLDESGIDLLS---KMLKLDPNQRITAK 276
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (400), Expect = 1e-43
Identities = 62/291 (21%), Positives = 111/291 (38%), Gaps = 44/291 (15%)
Query: 697 IGRGGYGSVYKAELPSGD--------TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHR 747
+G G +G V AE D VAVK L S E + +SE++ + + +H+
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 79
Query: 748 NIVKFYGFCSHARHSFLVYEYLERGSLARIL--------------SSETATEMDWSKRVN 793
NI+ G C+ +++ EY +G+L L S ++ V+
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 139
Query: 794 VIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS--E 851
VA + Y+ +HRD++++NVL+ + ++DFG A+ +
Sbjct: 140 CAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 852 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911
++APE + T + DV+SFGVL E+ PG + E
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY----------PGVPVEEL 246
Query: 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ + + + + C A P +RP + + + L
Sbjct: 247 FKLLKEGHRMDKP-----SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (388), Expect = 4e-42
Identities = 46/269 (17%), Positives = 98/269 (36%), Gaps = 30/269 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLH----SFTGETTHQKEFLSEIKALTGVRHRNIVK 751
+G G + V K E +G A K + + +++ E+ L ++H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
+ + L+ E + G L L+ + + + + + L+ +++
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF-----LKQILNGVYYLHSL 132
Query: 812 PIVHRDVSSKNVLLDFE----YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
I H D+ +N++L + DFG A + + + GT +VAPE+
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-NIFGTPEFVAPEIVNYE 191
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL-PPPWLE 926
+ + D++S GV+ ++ G P G E + ++
Sbjct: 192 PLGLEADMWSIGVITYILLSGASP-----------FLGDTKQETLANVSAVNYEFEDEYF 240
Query: 927 VGVEDKLKSIIEVALSCVDANPERRPNMQ 955
K I + +P++R +Q
Sbjct: 241 SNTSALAKDFIR---RLLVKDPKKRMTIQ 266
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 155 bits (392), Expect = 6e-42
Identities = 55/275 (20%), Positives = 94/275 (34%), Gaps = 27/275 (9%)
Query: 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLH----SFTGETTHQKEFLSEIKAL 741
++N+F IGRGG+G VY +G A+K L T + +
Sbjct: 2 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 61
Query: 742 TGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHA 801
+ IV + + + G L LS + +
Sbjct: 62 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILG 119
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAP 861
L +MH+ +V+RD+ N+LLD +SD G A + S GT+GY+AP
Sbjct: 120 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--GTHGYMAP 174
Query: 862 E-LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920
E L + D +S G + ++++G P + +
Sbjct: 175 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP-----------FRQHKTKDKHEIDRMTLT 223
Query: 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
L +L+S++E + + RR
Sbjct: 224 MAVELPDSFSPELRSLLE---GLLQRDVNRRLGCL 255
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 150 bits (380), Expect = 6e-41
Identities = 46/278 (16%), Positives = 97/278 (34%), Gaps = 32/278 (11%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G +G +Y + +G+ VA+K T + E K ++ + +
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLEC----VKTKHPQLHIESKIYKMMQGGVGIPTIRW 70
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
C ++ L SL L + + + + + + + Y+H + +H
Sbjct: 71 CGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIH 126
Query: 816 RDVSSKNVL---LDFEYEAHVSDFGTAKLLKPDSSN-------WSELAGTYGYVAPELAY 865
RDV N L ++ DFG AK + ++ L GT Y +
Sbjct: 127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHL 186
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925
++ + + D+ S G + + G P L A + + + + ++ P
Sbjct: 187 GIEQSRRDDLESLGYVLMYFNLGSLPWQ--------GLKAATKRQKYERISEKKMSTPIE 238
Query: 926 EV--GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961
+ G + + + C + +P+ + +L
Sbjct: 239 VLCKGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLF 273
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 149 bits (378), Expect = 6e-41
Identities = 57/285 (20%), Positives = 109/285 (38%), Gaps = 40/285 (14%)
Query: 691 FDESF----CIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKE-------FLSEI 738
F E++ +GRG V + P+ AVK + G + +E L E+
Sbjct: 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 60
Query: 739 KALTGVR-HRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKG 797
L V H NI++ FLV++ +++G L L+ + + + +++
Sbjct: 61 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRA 118
Query: 798 VAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYG 857
+ + +H IVHRD+ +N+LLD + ++DFG + L P + GT
Sbjct: 119 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGTPS 174
Query: 858 YVAPELAYTM------KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911
Y+APE+ ++ D++S GV+ ++ G P
Sbjct: 175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP-----------FWHRKQMLM 223
Query: 912 IDHMFDARLPPPWLE-VGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ + E D +K ++ + P++R +
Sbjct: 224 LRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKRYTAE 265
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (374), Expect = 3e-40
Identities = 62/282 (21%), Positives = 112/282 (39%), Gaps = 18/282 (6%)
Query: 688 INNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH 746
+ NF + IG G YG VYKA +G+ VA+KK+ T + EI L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 747 RNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH 806
NIVK +LV+E+L + + + + T + + + + L++ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLK-KFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAY 865
++HRD+ +N+L++ E ++DFG A+ ++ T Y APE L
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 866 TMKVTEKCDVYSFGVLALEVIKGQHP-------KDLLSSLSDSSLPGANMNEAIDHMFDA 918
+ D++S G + E++ + L P + + M D
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 919 RLP-PPWLEVGVEDKLKSIIEVALS----CVDANPERRPNMQ 955
+ P W + + E S + +P +R + +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (374), Expect = 3e-40
Identities = 57/275 (20%), Positives = 105/275 (38%), Gaps = 21/275 (7%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKL---HSFTGETTHQKEFLSEIKALTGVRHRNIVKF 752
+G G + +VYKA + VA+KK+ H + + L EIK L + H NI+
Sbjct: 6 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 65
Query: 753 YGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP 812
H + LV++++E I + K + L + + +
Sbjct: 66 LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAY-----MLMTLQGLEYLHQHW 120
Query: 813 IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV-TE 871
I+HRD+ N+LLD ++DFG AK + ++ T Y APEL + ++
Sbjct: 121 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGV 180
Query: 872 KCDVYSFGVLALEVIKGQHP------KDLLSSL-----SDSSLPGANMNEAIDHMFDARL 920
D+++ G + E++ D L+ + + + +M D++
Sbjct: 181 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF 240
Query: 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
P L ++++ NP R
Sbjct: 241 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITAT 275
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (371), Expect = 2e-39
Identities = 53/270 (19%), Positives = 100/270 (37%), Gaps = 24/270 (8%)
Query: 687 SINNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGV 744
++N+FD +G+G +G V +G A+K L ++E + L
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSY 804
RH + V EY G L LS E + ++ A +S
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-----GAEIVSA 117
Query: 805 MHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA 864
+ + +V+RD+ +N++LD + ++DFG K D + GT Y+APE+
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 865 YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924
D + GV+ E++ G+ P + + + + P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP-----------FYNQDHERLFELILMEEIRFPR 226
Query: 925 LEVGVEDKLKSIIEVALSCVDANPERRPNM 954
+ + KS++ + +P++R
Sbjct: 227 ---TLSPEAKSLLA---GLLKKDPKQRLGG 250
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (368), Expect = 2e-39
Identities = 56/292 (19%), Positives = 109/292 (37%), Gaps = 29/292 (9%)
Query: 686 RSINNFDESFCIGRGGYGSVYKAE--LPSGDTVAVKKLHSFTGETTHQKEFLSEI---KA 740
R+ ++ IG G YG V+KA G VA+K++ TGE + E+ +
Sbjct: 4 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 63
Query: 741 LTGVRHRNIVKFYGFCSHARHSFLVYEYLE----RGSLARILSSETATEMDWSKRVNVIK 796
L H N+V+ + C+ +R L L L + +++
Sbjct: 64 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 123
Query: 797 GVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTY 856
+ L ++H +VHRD+ +N+L+ + ++DFG A++ + S + T
Sbjct: 124 QLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS-VVVTL 179
Query: 857 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP-------------KDLLSSLSDSSL 903
Y APE+ D++S G + E+ + + D++ +
Sbjct: 180 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 239
Query: 904 PGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
P + P +++ K ++ C+ NP +R +
Sbjct: 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL---KCLTFNPAKRISAY 288
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (371), Expect = 3e-39
Identities = 56/268 (20%), Positives = 103/268 (38%), Gaps = 29/268 (10%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYG 754
+G G G V + + + A+K L + E++ + +IV+
Sbjct: 20 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRASQCPHIVRIVD 72
Query: 755 FCSHA----RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECR 810
+ + +V E L+ G L + + ++K + A+ Y+H
Sbjct: 73 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN- 131
Query: 811 PPIVHRDVSSKNVLLDFEYE---AHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM 867
I HRDV +N+L + ++DFG AK +S + T YVAPE+
Sbjct: 132 --IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPEVLGPE 188
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
K + CD++S GV+ ++ G P S+ L + + M P P
Sbjct: 189 KYDKSCDMWSLGVIMYILLCGYPPFY-----SNHGLAISPGMKTRIRMGQYEFPNPEWS- 242
Query: 928 GVEDKLKSIIEVALSCVDANPERRPNMQ 955
V +++K +I + + P +R +
Sbjct: 243 EVSEEVKMLIR---NLLKTEPTQRMTIT 267
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (365), Expect = 5e-39
Identities = 57/289 (19%), Positives = 104/289 (35%), Gaps = 40/289 (13%)
Query: 697 IGRGGYGSVYKA------ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIV 750
+GRG +G V +A + + TVAVK L + H+ + H N+V
Sbjct: 21 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 80
Query: 751 KFYGFCSHARHS-FLVYEYLERGSLARILSSE--------------TATEMDWSKRVNVI 795
G C+ ++ E+ + G+L+ L S+ + +
Sbjct: 81 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 140
Query: 796 KGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW--SELA 853
VA + ++ +HRD++++N+LL + + DFG A+ + D +
Sbjct: 141 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 197
Query: 854 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913
++APE + T + DV+SFGVL E+ PG ++E
Sbjct: 198 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------PGVKIDEEFC 247
Query: 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
+ + + L C P +RP + + L
Sbjct: 248 RRLKEGTRMRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 292
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (364), Expect = 1e-38
Identities = 55/300 (18%), Positives = 115/300 (38%), Gaps = 34/300 (11%)
Query: 685 IRSINNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTG 743
++ +++ IG+G +G V+KA +G VA+KK+ + L EIK L
Sbjct: 6 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQL 65
Query: 744 VRHRNIVKFYGFCSHA--------RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVI 795
++H N+V C +LV+++ E + + + KRV
Sbjct: 66 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV--- 122
Query: 796 KGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS----NWSE 851
+ L+ +++ R I+HRD+ + NVL+ + ++DFG A+ + ++
Sbjct: 123 --MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTN 180
Query: 852 LAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHP-------------KDLLSS 897
T Y PEL + D++ G + E+ L S
Sbjct: 181 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 240
Query: 898 LSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVAL--SCVDANPERRPNMQ 955
++ P + E + + + ++ ++ ++ + L + +P +R +
Sbjct: 241 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 300
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 141 bits (357), Expect = 5e-38
Identities = 46/282 (16%), Positives = 96/282 (34%), Gaps = 36/282 (12%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN-IVKFYG 754
IG G +G +++ L + VA+K + + E + + I Y
Sbjct: 13 IGEGSFGVIFEGTNLLNNQQVAIKFEP----RRSDAPQLRDEYRTYKLLAGCTGIPNVYY 68
Query: 755 FCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814
F H+ LV + L G L + K + + +H + +V
Sbjct: 69 FGQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LV 123
Query: 815 HRDVSSKNVLLDFEYEAH-----VSDFGTAKLLKPDSSN-------WSELAGTYGYVAPE 862
+RD+ N L+ + V DFG K + + L+GT Y++
Sbjct: 124 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSIN 183
Query: 863 LAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922
+ + + D+ + G + + ++G P L + A + + + + +
Sbjct: 184 THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA--------ATNKQKYERIGEKKQST 235
Query: 923 PWLEV--GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962
P E+ G ++ + + + P+ + L S
Sbjct: 236 PLRELCAGFPEEFYKYMH---YARNLAFDATPDYDYLQGLFS 274
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 4e-37
Identities = 55/268 (20%), Positives = 96/268 (35%), Gaps = 38/268 (14%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLH----SFTGETTHQKEFLSEIKALTGVR--HRNI 749
+G GG+GSVY + VA+K + S GE + E+ L V +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 750 VKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
++ + L+ E E +E + + V A+ + H+
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNC- 129
Query: 810 RPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPE-LAYTM 867
++HRD+ +N+L+D E + DFG+ LLK + +++ GT Y PE + Y
Sbjct: 130 --GVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--TVYTDFDGTRVYSPPEWIRYHR 185
Query: 868 KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927
V+S G+L +++ G P F R+
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIP-----------FEHDEEIIRGQVFFRQRVSSE---- 230
Query: 928 GVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ +I C+ P RP +
Sbjct: 231 -----CQHLIR---WCLALRPSDRPTFE 250
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 5e-37
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 36/285 (12%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG V A + + VA+KK+ F + T+ + L EIK L RH NI+
Sbjct: 16 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 74
Query: 756 CSHA----RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRP 811
+ +L L ++L ++ + + + L Y+H
Sbjct: 75 IRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRGLKYIH---SA 128
Query: 812 PIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN---WSELAGTYGYVAPELAYT-M 867
++HRD+ N+LL+ + + DFG A++ PD + +E T Y APE+
Sbjct: 129 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 188
Query: 868 KVTEKCDVYSFGVLALEVIKGQHP-------------KDLLSSLSDSSLPGANMNEAIDH 914
T+ D++S G + E++ + +L S S L +A ++
Sbjct: 189 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 248
Query: 915 MFDA--RLPPPWLEV--GVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ + PW + + K +++ + NP +R ++
Sbjct: 249 LLSLPHKNKVPWNRLFPNADSKALDLLD---KMLTFNPHKRIEVE 290
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (353), Expect = 7e-37
Identities = 62/288 (21%), Positives = 110/288 (38%), Gaps = 32/288 (11%)
Query: 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN 748
++ ++ IG G +G VY+A+L SG+ VA+KK+ ++ E++ + + H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHCN 74
Query: 749 IVKFYGFCSHA------RHSFLVYEYLERGSLARILS-SETATEMDWSKRVNVIKGVAHA 801
IV+ F + + LV +Y+ S + + + +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFEYEAH-VSDFGTAKLLKPDSSNWSELAGTYGYVA 860
L+Y+H I HRD+ +N+LLD + + DFG+AK L N S + Y
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 861 PELAYTMKVTEKCDVYSFGVLALEVIKGQHP-------------KDLLSSLSDSSLPGAN 907
+ T DV+S G + E++ GQ +L + + + N
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 908 MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
N + F PW +V I + ++ P R
Sbjct: 252 PNYT-EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 138 bits (348), Expect = 3e-36
Identities = 56/304 (18%), Positives = 107/304 (35%), Gaps = 30/304 (9%)
Query: 652 RKKDSQEQEENNRNNQALLSILTYEGKLVYEEIIRSINNFDESFCIGRGGYGSVYKAE-L 710
+K QE + + +E + ++ FD +G G +G V +
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETP---SQNTAQLDQFDRIKTLGTGSFGRVMLVKHK 63
Query: 711 PSGDTVAVKKLH-SFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769
SG+ A+K L + + L+E + L V +VK + ++V EY+
Sbjct: 64 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829
G + L + Y+H +++RD+ +N+L+D +
Sbjct: 124 AGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQG 178
Query: 830 EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ 889
V+DFG AK L GT +APE+ + + D ++ GVL E+ G
Sbjct: 179 YIQVTDFGFAK---RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 890 HPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPE 949
P + + + ++ P LK ++ + + +
Sbjct: 236 PP-----------FFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLR---NLLQVDLT 278
Query: 950 RRPN 953
+R
Sbjct: 279 KRFG 282
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (342), Expect = 4e-36
Identities = 55/274 (20%), Positives = 113/274 (41%), Gaps = 20/274 (7%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G YG+V+KA+ + + VA+K++ + L EI L ++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVH 815
+ LV+E+ ++ S + + K + L + ++H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF-----LFQLLKGLGFCHSRNVLH 124
Query: 816 RDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV-TEKCD 874
RD+ +N+L++ E +++FG A+ +S T Y P++ + K+ + D
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 875 VYSFGVLALEVIKGQHPKDLLSSLSD------------SSLPGANMNEAIDHMFDARLPP 922
++S G + E+ P + + D + +M + D+ P
Sbjct: 185 MWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPA 244
Query: 923 PWLEVGVEDKL-KSIIEVALSCVDANPERRPNMQ 955
V V KL + ++ + + NP +R + +
Sbjct: 245 TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAE 278
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 9e-34
Identities = 56/277 (20%), Positives = 102/277 (36%), Gaps = 30/277 (10%)
Query: 687 SINNFDESFCIGRGGYGSVYKAEL----PSGDTVAVKKLH--SFTGETTHQKEFLSEIKA 740
I NF+ +G G YG V+ +G A+K L + + + +E +
Sbjct: 22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 81
Query: 741 LTGVRHR-NIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVA 799
L +R +V + L+ +Y+ G L LS V V
Sbjct: 82 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE-----VQIYVG 136
Query: 800 HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS-ELAGTYGY 858
+ + H + I++RD+ +N+LLD ++DFG +K D + + + GT Y
Sbjct: 137 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 196
Query: 859 VAPELAYTMK--VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916
+AP++ + D +S GVL E++ G P + +
Sbjct: 197 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP-----------FTVDGEKNSQAEIS 245
Query: 917 DARL-PPPWLEVGVEDKLKSIIEVALSCVDANPERRP 952
L P + K +I+ + +P++R
Sbjct: 246 RRILKSEPPYPQEMSALAKDLIQ---RLLMKDPKKRL 279
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 6e-32
Identities = 51/300 (17%), Positives = 111/300 (37%), Gaps = 34/300 (11%)
Query: 681 YEEIIRSINNFDESF----CIGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFL 735
+E+ ++ + +G G YG+V A + +G VA+KKL+ K
Sbjct: 6 RQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY 65
Query: 736 SEIKALTGVRHRNIVKFYGFCSHARHS------FLVYEYLERGSLARILSSETATEMDWS 789
E++ L +RH N++ + +LV ++ L +++ E +
Sbjct: 66 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLMKHEK---LGED 121
Query: 790 KRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW 849
+ ++ + L Y+H HRD+ N+ ++ + E + DFG A+ + DS
Sbjct: 122 RIQFLVYQMLKGLRYIHAAGII---HRDLKPGNLAVNEDCELKILDFGLAR--QADSEMT 176
Query: 850 SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP-------------KDLLS 896
+ + + M+ T+ D++S G + E+I G+ +
Sbjct: 177 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTG 236
Query: 897 SLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ 955
+ + +EA ++M L + + + + + + E+R
Sbjct: 237 TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG 296
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 123 bits (308), Expect = 4e-31
Identities = 53/296 (17%), Positives = 99/296 (33%), Gaps = 39/296 (13%)
Query: 686 RSINNFDESFCIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV 744
+ +++ +GRG Y V++A + + + V VK L +K+ EIK L +
Sbjct: 32 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENL 86
Query: 745 R-HRNIVKFYGFCSHA--RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHA 801
R NI+ R LV+E++ ++ + + + + A
Sbjct: 87 RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKA 141
Query: 802 LSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVA 860
L Y H I+HRDV NV++D E + + D+G A+ P +A Y
Sbjct: 142 LDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 198
Query: 861 PELAYTMKVTEKCDVYSFGVLALEVIKGQHP--------------KDLLSSLSDSSLPGA 906
L D++S G + +I + P +L +
Sbjct: 199 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 258
Query: 907 NMNEA---IDHMFDARLPPPWLEVGVEDKLKSIIEVAL----SCVDANPERRPNMQ 955
E + + W + + AL + + + R +
Sbjct: 259 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 314
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 121 bits (304), Expect = 3e-30
Identities = 78/381 (20%), Positives = 129/381 (33%), Gaps = 51/381 (13%)
Query: 226 LRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN 285
L + K L ++ ++ Q +L +T L + + + L++L ++ +N
Sbjct: 21 LAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSNN 76
Query: 286 QLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRN 345
QL+ P + N L + + NQ P + + + I L
Sbjct: 77 QLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 134
Query: 346 CT------SLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW------- 392
++ + +LK ++SSN
Sbjct: 135 NRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 194
Query: 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNG 452
L L N I+ P I T L EL + N L LA+LT+L DL L
Sbjct: 195 KLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 250
Query: 453 NQLSGGIPPELGLLTDLGYLDLSANRFSKSIP--------------------GNMGYLLK 492
NQ+S P L LT L L L AN+ S P + L
Sbjct: 251 NQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKN 308
Query: 493 LHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552
L YL + N S P+ L +L L ++N + + NL ++ L+ HN +S
Sbjct: 309 LTYLTLYFNNISDISPV--SSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQIS 364
Query: 553 GSIPTNFENMHGLLSIDISYN 573
P N+ + + ++
Sbjct: 365 DLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 101 bits (252), Expect = 2e-23
Identities = 78/399 (19%), Positives = 135/399 (33%), Gaps = 32/399 (8%)
Query: 103 PIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162
L + L + + + L + L + SI + +L++L +
Sbjct: 17 TDTALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SIDGVEYLNNLTQINF 73
Query: 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSS 222
N L P + NL+ LV + + NN + P + + LF + P+ +
Sbjct: 74 SNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNL 131
Query: 223 FGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHL 282
R +N +S + T L+NL++LE L +
Sbjct: 132 TNLNRLELS----SNTISDISALSGLTSLQQL-----SFGNQVTDLKPLANLTTLERLDI 182
Query: 283 YDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKT 342
N+ + NL SL NQ + P I +L S++ N T
Sbjct: 183 SSNK--VSDISVLAKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKD--IGT 236
Query: 343 LRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKI 402
L + T+L + L NQ+ L L N+ S L L++
Sbjct: 237 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALTNLEL 292
Query: 403 AGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE 462
N + I N L L N++ P+ +LT L L N++S
Sbjct: 293 NENQLE--DISPISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFANNKVSD--VSS 346
Query: 463 LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSN 501
L LT++ +L N+ S P + L ++ L ++
Sbjct: 347 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 100 bits (250), Expect = 3e-23
Identities = 76/382 (19%), Positives = 137/382 (35%), Gaps = 37/382 (9%)
Query: 62 ISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFS 121
+ L T++ T+ Q + ++ L + + + L L +N S+N +
Sbjct: 25 MKTVLGKTNVTDTVSQ---TDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSNNQLT 79
Query: 122 GKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPV-------- 173
P + LT L + M N + P + + D
Sbjct: 80 DITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRL 137
Query: 174 -----SIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFL-KKNHLRGPIPSSFGYLR 227
+I ++S+L GL G+ + + L+NL L + + S L
Sbjct: 138 ELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 197
Query: 228 KLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQL 287
L L +NNQ+S P I L +LSL+ NQL+ +L++L++L L L +NQ+
Sbjct: 198 NLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQI 253
Query: 288 SGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCT 347
S P + L L +G NQ + P + + + + + N
Sbjct: 254 SNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED----ISPISNLK 307
Query: 348 SLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNI 407
+L + L N + L+ + NK S+ N + L N I
Sbjct: 308 NLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQI 363
Query: 408 TGGIPPEIGNATQLHELDFSSN 429
+ P + N T++ +L +
Sbjct: 364 SDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 54.6 bits (130), Expect = 3e-08
Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 7/112 (6%)
Query: 28 NSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLS 87
+++ P L + + ++ + + L ++ P S + L
Sbjct: 276 SNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS---PVSSLTKLQ 332
Query: 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHM 139
L N++ S + NLT + +L+ N S P + LT + L +
Sbjct: 333 RLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 380
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 4e-30
Identities = 51/250 (20%), Positives = 98/250 (39%), Gaps = 28/250 (11%)
Query: 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF 755
IG G G V A + VA+KKL TH K E+ + V H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 756 CSHARHS------FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC 809
+ + +LV E ++ I E+D + ++ + + ++H
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG 139
Query: 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKV 869
+HRD+ N+++ + + DFG A+ S + T Y APE+ M
Sbjct: 140 I---IHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 870 TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVG 928
E D++S G + E+++ + PG + + + + + P P
Sbjct: 196 KENVDIWSVGCIMGEMVRHKIL-----------FPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 929 VEDKLKSIIE 938
++ +++ +E
Sbjct: 245 LQPTVRNYVE 254
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 9e-30
Identities = 56/302 (18%), Positives = 111/302 (36%), Gaps = 38/302 (12%)
Query: 681 YEEIIRSINNFDESF----CIGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFL 735
+E+ ++I E + +G G YGSV A +G VAVKKL H K
Sbjct: 6 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 65
Query: 736 SEIKALTGVRHRNIVKFYGFCSHAR-----HSFLVYEYLERGSLARILSSETATEMDWSK 790
E++ L ++H N++ + AR + + +L L I+ + ++
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDH 122
Query: 791 RVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWS 850
+I + L Y+H HRD+ N+ ++ + E + DFG A+ D
Sbjct: 123 VQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTG 177
Query: 851 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP-------------KDLLSS 897
+A + + M + D++S G + E++ G+ L+ +
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 898 LSDSSLPGANMNEAIDHMFDARLPPPW----LEVGVEDKLKSIIEVALSCVDANPERRPN 953
L + A +++ P + +G ++E + + ++R
Sbjct: 238 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLE---KMLVLDSDKRIT 294
Query: 954 MQ 955
Sbjct: 295 AA 296
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 102 bits (255), Expect = 2e-24
Identities = 78/315 (24%), Positives = 124/315 (39%), Gaps = 17/315 (5%)
Query: 13 ARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCN---HAGRIISINLTST 69
+ LL+ K L N L SW T TW G+ C+ R+ +++L+
Sbjct: 8 KQALLQIKKDLGNPTT--LSSW-----LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGL 60
Query: 70 SLKGTLDQFP-FSLFSHLSYLDLNEN-QLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSE 127
+L + +L++L + L G IP I LT+L +L ++ + SG IP
Sbjct: 61 NLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF 120
Query: 128 IGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVG-LY 185
+ + L L N L+G++P I L +L + DGN + G IP S G+ S L +
Sbjct: 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180
Query: 186 LYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQ 245
+ N L G IP + NL+ + N+
Sbjct: 181 ISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKV 240
Query: 246 EIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLS 305
+ DL N++ GT+P L+ L L L++ N L G IP + GN + +
Sbjct: 241 GLSKNLNGLDLR--NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSA 297
Query: 306 VGGNQFTGFLPQNIC 320
N+ P C
Sbjct: 298 YANNKCLCGSPLPAC 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 81.0 bits (198), Expect = 5e-17
Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 7/265 (2%)
Query: 152 GHLSSLKNLALDGNHLDG--PIPVSIGNLSSLVGLYLYNN-SLPGSIPSSIGNLSNLVYL 208
+ NL L G +L PIP S+ NL L LY+ +L G IP +I L+ L YL
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 209 FLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVP 268
++ ++ G IP ++ L L+ S N LSG++P I +L L ++ N++ G +P
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 269 SSLSNLSSLEI-LHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQY 327
S + S L + + N+L+G IP N + S
Sbjct: 167 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDL--SRNMLEGDASVLFGSDKNTQ 224
Query: 328 FSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGEL 387
+ + +L + L N++ G + L ++S+N GE+
Sbjct: 225 KIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Query: 388 SSNWWNCPQLGILKIAGNNITGGIP 412
N + + A N G P
Sbjct: 285 PQ-GGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 80.6 bits (197), Expect = 6e-17
Identities = 64/265 (24%), Positives = 102/265 (38%), Gaps = 8/265 (3%)
Query: 349 LERVRLEKNQLIGN--ISDDFGIYPNLKLFDLSYN-KFYGELSSNWWNCPQLGILKIAGN 405
+ + L L I P L + G + QL L I
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT 111
Query: 406 NITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL 465
N++G IP + L LDFS N L G +P +++L +L + +GN++SG IP G
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Query: 466 LTDLGYLDLSA-NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSH 524
+ L + NR + IP L S + L + ++
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANLNLAFVDL--SRNMLEGDASVLFGSDKNTQKIHLA 229
Query: 525 NLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEA 584
++ ++L L+L +N + G++P + L S+++S+N L G IP
Sbjct: 230 KNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN 289
Query: 585 FRHAPVEALQGNKGLCGEVSGLQPC 609
+ V A NK LCG S L C
Sbjct: 290 LQRFDVSAYANNKCLCG--SPLPAC 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 49.0 bits (115), Expect = 1e-06
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
Query: 416 GNATQLHELDFSSNHLVGKVPL--ELANLTSLNDLILNGN-QLSGGIPPELGLLTDLGYL 472
+++ LD S +L P+ LANL LN L + G L G IPP + LT L YL
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 473 DLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIP 532
++ S +IP + + L L+ S N S +P + L L + N + G IP
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 533 PEICNLESLEKLNLSHNN 550
+ L N
Sbjct: 167 DSYGSFSKLFTSMTISRN 184
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 40.5 bits (93), Expect = 7e-04
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 512 GKLVQLSELDLSHNLLRG--EIPPEICNLESLEKLNLSHN-NLSGSIPTNFENMHGLLSI 568
+ +++ LDLS L IP + NL L L + NL G IP + L +
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 569 DISYN 573
I++
Sbjct: 107 YITHT 111
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 100 bits (248), Expect = 4e-23
Identities = 49/247 (19%), Positives = 88/247 (35%), Gaps = 30/247 (12%)
Query: 697 IGRGGYGSVYKAE-LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK---- 751
+G G + +V+ A+ + + VA+K + + + + EIK L V + K
Sbjct: 21 LGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSM 77
Query: 752 -----------FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAH 800
F + H +V+E L LA I E + + K +
Sbjct: 78 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEH-RGIPLIYVKQISKQLLL 136
Query: 801 ALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTAKLLKPDSS--NWSELAGTYG 857
L YMH C I+H D+ +NVL++ ++ A L +++ T
Sbjct: 137 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 194
Query: 858 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917
Y +PE+ D++S L E+I G + D ++ I + +
Sbjct: 195 YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE-----PDEGHSYTKDDDHIAQIIE 249
Query: 918 ARLPPPW 924
P
Sbjct: 250 LLGELPS 256
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 97.4 bits (241), Expect = 1e-22
Identities = 54/282 (19%), Positives = 103/282 (36%), Gaps = 19/282 (6%)
Query: 48 CTWSGISCNHAG-----RIISINLTSTSLKG----TLDQFPFSLFSHLSYLDLNENQLYG 98
C + C+ G + + + L+ + F +L L L N++
Sbjct: 10 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 69
Query: 99 NIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLK 158
P L KL+ L LS N L L V + + S+ + +
Sbjct: 70 ISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVV 129
Query: 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGP 218
L + G + + L + + + ++ +IP + +L L L N +
Sbjct: 130 ELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKV 186
Query: 219 IPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLE 278
+S L L KL LS N +S + N L +L L+ N+L VP L++ ++
Sbjct: 187 DAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQ 245
Query: 279 ILHLYDNQLSG------HIPQEIGNFMNLNSLSVGGNQFTGF 314
+++L++N +S P + + +S+ N +
Sbjct: 246 VVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW 287
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 97.0 bits (240), Expect = 2e-22
Identities = 54/267 (20%), Positives = 94/267 (35%), Gaps = 13/267 (4%)
Query: 171 IPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT 230
+P + L L NN + NL NL L L N + P +F L KL
Sbjct: 25 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 82
Query: 231 KLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGH 290
+L LS NQL + L+ L ++R +V + L+ + +E L + SG
Sbjct: 83 RLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE-LGTNPLKSSGI 141
Query: 291 IPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLE 350
L+ + + T +PQ + SL + N +L+ +L
Sbjct: 142 ENGAFQGMKKLSYIRIADTNIT-TIPQGLPP--SLTELHLDGNKITKVDAASLKGLNNLA 198
Query: 351 RVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITG- 409
++ L N + + P+L+ L+ NK + + ++ + NNI+
Sbjct: 199 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGG-LADHKYIQVVYLHNNNISAI 257
Query: 410 -----GIPPEIGNATQLHELDFSSNHL 431
P + SN +
Sbjct: 258 GSNDFCPPGYNTKKASYSGVSLFSNPV 284
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 89.7 bits (221), Expect = 4e-20
Identities = 46/278 (16%), Positives = 94/278 (33%), Gaps = 13/278 (4%)
Query: 315 LPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLK 374
+P+++ + +N +N +L + L N++ F L+
Sbjct: 25 VPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 82
Query: 375 LFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGK 434
LS N+ +L + + + + + + L + G
Sbjct: 83 RLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE-LGTNPLKSSGI 141
Query: 435 VPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLH 494
+ L+ + + ++ IP GL L L L N+ +K ++ L L
Sbjct: 142 ENGAFQGMKKLSYIRIADTNITT-IPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLA 198
Query: 495 YLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGS 554
L +S N S L L EL L++N L ++P + + + ++ + L +NN+S
Sbjct: 199 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 257
Query: 555 IPTNF------ENMHGLLSIDISYNELDGPIPSIEAFR 586
+F + + N + FR
Sbjct: 258 GSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 295
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 80.9 bits (198), Expect = 5e-17
Identities = 48/230 (20%), Positives = 81/230 (35%), Gaps = 4/230 (1%)
Query: 368 GIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFS 427
+ P+ L DL NK ++ N L L + N I+ P +L L S
Sbjct: 28 DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87
Query: 428 SNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNM 487
N L L L ++ + L + + L + + S G
Sbjct: 88 KNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVV-ELGTNPLKSSGIENGAF 146
Query: 488 GYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS 547
+ KL Y+ ++ + I G L+EL L N + + L +L KL LS
Sbjct: 147 QGMKKLSYIRIADTNITT---IPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLS 203
Query: 548 HNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNK 597
N++S + N L + ++ N+L + ++ V L N
Sbjct: 204 FNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNN 253
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 80.1 bits (196), Expect = 9e-17
Identities = 43/219 (19%), Positives = 79/219 (36%), Gaps = 4/219 (1%)
Query: 395 PQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQ 454
P +L + N IT + N LH L +N + P A L L L L+ NQ
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 455 LSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKL 514
L L +L + + KS+ + ++ + + S +
Sbjct: 91 LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTN-PLKSSGIENGAFQGM 149
Query: 515 VQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNE 574
+LS + ++ + IP + SL +L+L N ++ + + ++ L + +S+N
Sbjct: 150 KKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 575 LDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPCKALK 613
+ A E N L GL K ++
Sbjct: 207 ISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQ 245
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 54.7 bits (130), Expect = 2e-08
Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 2/158 (1%)
Query: 481 KSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLES 540
+ +P ++ L++ +N+ ++ L L L L +N + P L
Sbjct: 23 EKVPKDLPPDTA--LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVK 80
Query: 541 LEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLC 600
LE+L LS N L + + L + ++ + + K
Sbjct: 81 LERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 140
Query: 601 GEVSGLQPCKALKSYKHVHRKWRTVLFTVLPLLAALAL 638
E Q K L + T+ + P L L L
Sbjct: 141 IENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHL 178
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.2 bits (227), Expect = 6e-21
Identities = 47/265 (17%), Positives = 83/265 (31%), Gaps = 7/265 (2%)
Query: 290 HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSL 349
+P I + + GN+ + + +L +H N L
Sbjct: 25 AVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 350 ERVRLEKNQLIGNI-SDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT 408
E++ L N + ++ F L L + L L + N +
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 409 GGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTD 468
+ L L N + L SL+ L+L+ N+++ P L
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLR 528
L L L AN S + L L YL ++ N + + L + S + +
Sbjct: 203 LMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVP 261
Query: 529 GEIPPEICNLESLEKLNLSHNNLSG 553
+P L + L+ N+L G
Sbjct: 262 CSLPQ---RLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.9 bits (221), Expect = 3e-20
Identities = 65/288 (22%), Positives = 107/288 (37%), Gaps = 10/288 (3%)
Query: 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGN 106
PC C + ++ + + L+ P + + + L+ N++ +
Sbjct: 1 PCP-GACVCYNEPKV-TTSCPQQGLQ----AVPVGIPAASQRIFLHGNRISHVPAASFRA 54
Query: 107 LTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSI--PEIGHLSSLKNLALDG 164
L L L SN + + L LE L + N S+ L L L LD
Sbjct: 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDR 114
Query: 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFG 224
L P L++L LYL +N+L + +L NL +LFL N + +F
Sbjct: 115 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 174
Query: 225 YLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYD 284
L L +L L N+++ P +L L L L N L +L+ L +L+ L L D
Sbjct: 175 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 234
Query: 285 NQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHD 332
N + L ++ LPQ + L+ + +D
Sbjct: 235 NPWVCDCR-ARPLWAWLQKFRGSSSEVPCSLPQRL-AGRDLKRLAAND 280
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.3 bits (217), Expect = 1e-19
Identities = 62/264 (23%), Positives = 95/264 (35%), Gaps = 8/264 (3%)
Query: 100 IPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKN 159
+P I ++ + L N S + NL +L + N L +L
Sbjct: 26 VPVGIPAASQR--IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 160 LALDGNH--LDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG 217
++ L P + L L L+L L P L+ L YL+L+ N L+
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
Query: 218 PIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSL 277
+F L LT L L N++S + L L L L QN++ P + +L L
Sbjct: 144 LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203
Query: 278 EILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIG 337
L+L+ N LS + + L L + N + + LQ F +
Sbjct: 204 MTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC-DCRARPLWAWLQKFRGSSSEVPC 262
Query: 338 SLPKTLRNCTSLERVRLEKNQLIG 361
SLP+ L L N L G
Sbjct: 263 SLPQRLAGRDLKR---LAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.9 bits (195), Expect = 7e-17
Identities = 55/264 (20%), Positives = 102/264 (38%), Gaps = 6/264 (2%)
Query: 147 SIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLV 206
++P G ++ + + L GN + S +L L+L++N L ++ L+ L
Sbjct: 25 AVPV-GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 207 YLFLKKNHLRGPI-PSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG 265
L L N + P++F L +L L L L P L L L L N L+
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
Query: 266 TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSL 325
+ +L +L L L+ N++S + +L+ L + N+ P G L
Sbjct: 144 LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203
Query: 326 QYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYG 385
+ N + L +L+ +RL N + + ++ L+ F S ++
Sbjct: 204 MTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC-RARPLWAWLQKFRGSSSEVPC 262
Query: 386 ELSSNWWNCPQLGILKIAGNNITG 409
L + ++A N++ G
Sbjct: 263 SLPQRLAG---RDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.7 bits (179), Expect = 1e-14
Identities = 52/251 (20%), Positives = 82/251 (32%), Gaps = 4/251 (1%)
Query: 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNN 406
+ +R+ L N++ + F NL + L N ++ + L L ++ N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 407 ITGGIPP-EIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL 465
+ P +LH L L P L +L L L N L
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 466 LTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHN 525
L +L +L L NR S L L L + N + P L +L L L N
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Query: 526 LLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAF 585
L + L +L+ L L+ N L S +E+ +P +
Sbjct: 212 NLSALPTEALAPLRALQYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSSEVPCSLP--QRL 268
Query: 586 RHAPVEALQGN 596
++ L N
Sbjct: 269 AGRDLKRLAAN 279
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.9 bits (151), Expect = 3e-11
Identities = 35/158 (22%), Positives = 52/158 (32%), Gaps = 5/158 (3%)
Query: 85 HLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHL 144
L YL L +N L +L L L L N S L +L+ L + N +
Sbjct: 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189
Query: 145 NGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLS 203
P L L L L N+L ++ L +L L L +N + +
Sbjct: 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR-ARPLWA 248
Query: 204 NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241
L + + +P L L+ N L G
Sbjct: 249 WLQKFRGSSSEVPCSLPQR---LAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.6 bits (132), Expect = 9e-09
Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 5/139 (3%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHM 139
F +L++L L+ N++ L L L L N + P L L L++
Sbjct: 149 FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYL 208
Query: 140 FVN-HLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS 198
F N + L +L+ L L+ N + + L ++ +P S+P
Sbjct: 209 FANNLSALPTEALAPLRALQYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSSEVPCSLPQ- 266
Query: 199 IGNLSNLVYLFLKKNHLRG 217
L+ L N L+G
Sbjct: 267 --RLAGRDLKRLAANDLQG 283
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.1 bits (207), Expect = 5e-19
Identities = 30/182 (16%), Positives = 52/182 (28%), Gaps = 27/182 (14%)
Query: 697 IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQK--------EFLSEIKALTGVRHRN 748
+G G +V+ VK K F R
Sbjct: 8 MGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRA 67
Query: 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE 808
+ K G Y + L ++ ++ + V+ + ++ +H
Sbjct: 68 LQKLQGLAVPKV-----YAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHR 122
Query: 809 CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK---------LLKPDSSNWSE-LAGTYGY 858
IVH D+S NVL+ E + DF + +L+ D N + TY
Sbjct: 123 G---IVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYRT 178
Query: 859 VA 860
Sbjct: 179 EK 180
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.6 bits (192), Expect = 1e-16
Identities = 50/211 (23%), Positives = 69/211 (32%), Gaps = 7/211 (3%)
Query: 54 SCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFL 113
+ + +N +L P L + L L+EN LY + + T+L L
Sbjct: 5 EVSKVASHLEVNCDKRNLT----ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQL 60
Query: 114 NLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPV 173
NL + L L L + N L L +L L + N L
Sbjct: 61 NLDRAELTKLQVDGT--LPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 174 SIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLE 233
++ L L LYL N L P + L L L N+L L L L
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR 264
L N L +IP+ LL L N
Sbjct: 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.5 bits (158), Expect = 4e-12
Identities = 39/210 (18%), Positives = 66/210 (31%), Gaps = 7/210 (3%)
Query: 246 EIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLS 305
E+ + +++ + L +P L ILHL +N L + + L L+
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 306 VGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISD 365
+ + T S + + L +TL T + + N+L
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALT---VLDVSFNRLTSLPLG 118
Query: 366 DFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELD 425
L+ L N+ P+L L +A NN+T + L L
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 426 FSSNHLVGKVPLELANLTSLNDLILNGNQL 455
N L +P L L+GN
Sbjct: 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.7 bits (156), Expect = 7e-12
Identities = 35/208 (16%), Positives = 66/208 (31%), Gaps = 7/208 (3%)
Query: 222 SFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILH 281
+ ++ L+ ++P ++ K T L LS+N L ++L + L L+
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 282 LYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK 341
L + ++ + + + LP +L V N
Sbjct: 62 LDRAE---LTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 342 TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILK 401
LR L+ + L+ N+L P L+ L+ N + L L
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 402 IAGNNITGGIPPEIGNATQLHELDFSSN 429
+ N++ IP + L N
Sbjct: 179 LQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.4 bits (124), Expect = 9e-08
Identities = 35/208 (16%), Positives = 69/208 (33%), Gaps = 49/208 (23%)
Query: 174 SIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLE 233
+ ++S + + +L ++P + + L L +N L ++ +LT+L
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 234 LSNNQ---------------------------------------------LSGSIPQEIG 248
L + L+ +
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR 121
Query: 249 NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGG 308
L L +L L N+L+ P L+ LE L L +N L+ + NL++L +
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQE 181
Query: 309 NQFTGFLPQNICQSGSLQYFSVHDNYFI 336
N +P+ S L + +H N ++
Sbjct: 182 NSLY-TIPKGFFGSHLLPFAFLHGNPWL 208
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.5 bits (119), Expect = 3e-07
Identities = 37/178 (20%), Positives = 59/178 (33%), Gaps = 22/178 (12%)
Query: 395 PQLGILKIAGNNITGGIPPEIGNATQLHELDFSS-NHLVGKVPLELANLTSLN------- 446
IL ++ N + + T+L +L+ +V L L +L+
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ 90
Query: 447 -------------DLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKL 493
L ++ N+L+ L L +L L L N PG + KL
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 494 HYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNL 551
L++++N ++ L L L L L N L IP L L N
Sbjct: 151 EKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.9 bits (115), Expect = 1e-06
Identities = 40/209 (19%), Positives = 64/209 (30%), Gaps = 51/209 (24%)
Query: 414 EIGNATQLHELDFSSNHLVGKVPLEL-ANLTSLNDLILNGNQLSGGIPPELGLLTDLGYL 472
E+ E++ +L +P +L + T L+ L+ N L L T L L
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLPKDTTILH---LSENLLYTFSLATLMPYTRLTQL 60
Query: 473 DLSANRFSKSIPGNMGYLLKLHYLNMS--------------------------------- 499
+L +K +L L+ +
Sbjct: 61 NLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGAL 120
Query: 500 ------------SNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS 547
NE P L +L +L L++N L + LE+L+ L L
Sbjct: 121 RGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQ 180
Query: 548 HNNLSGSIPTNFENMHGLLSIDISYNELD 576
N+L +IP F H L + N
Sbjct: 181 ENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 0.001
Identities = 41/208 (19%), Positives = 65/208 (31%), Gaps = 48/208 (23%)
Query: 438 ELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLN 497
E++ + S ++ + L+ +PP+L D L LS N + +L LN
Sbjct: 5 EVSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 498 MSSNE---------------------------------------------FSQEIPIQLG 512
+ E + L
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR 121
Query: 513 KLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISY 572
L +L EL L N L+ P + LEKL+L++NNL+ + L ++ +
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQE 181
Query: 573 NELDGPIPSIEAFRHAPVEALQGNKGLC 600
N L P L GN LC
Sbjct: 182 NSLYTIPKGFFGSHLLPFAFLHGNPWLC 209
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.1 bits (170), Expect = 1e-13
Identities = 36/270 (13%), Positives = 89/270 (32%), Gaps = 16/270 (5%)
Query: 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289
L+L+ L + + + ++ ++ + + S ++ + L ++ +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQGVIA-FRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEV 60
Query: 290 -HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLP-------- 340
+ + L +LS+ G + + + + ++ +L ++
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 120
Query: 341 KTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGIL 400
L + + ++ L L N +LS+ CP L L
Sbjct: 121 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 180
Query: 401 KIAGN-NITGGIPPEIGNATQLHELDFSS-NHLVGKVPLELANLTSLNDLILNGNQLSGG 458
++ + + E L L S ++ + LEL + +L L + G G
Sbjct: 181 DLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGT 240
Query: 459 IPPELGLLTDLGYLDLSANRFSKSIPGNMG 488
+ L L +L ++ + F+ +G
Sbjct: 241 LQL---LKEALPHLQINCSHFTTIARPTIG 267
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.2 bits (165), Expect = 6e-13
Identities = 46/284 (16%), Positives = 94/284 (33%), Gaps = 24/284 (8%)
Query: 184 LYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG-S 242
L L +L + + + ++ ++ + P+ F ++ ++LSN+ + +
Sbjct: 5 LDLTGKNLHPDVTGRLLSQ-GVIAFRCPRSFMDQPLAEHFS-PFRVQHMDLSNSVIEVST 62
Query: 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLN 302
+ + L +LSL +L + ++L+ S+L L N +
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL----------------NLSGCS 106
Query: 303 SLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGN 362
S Q + + F + + ++ T L KN +
Sbjct: 107 GFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSD 166
Query: 363 ISDDFGIYPNLKLFDLSYN-KFYGELSSNWWNCPQLGILKIAG-NNITGGIPPEIGNATQ 420
+S PNL DLS + + ++ L L ++ +I E+G
Sbjct: 167 LSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPT 226
Query: 421 LHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELG 464
L L G + L L L +N + + P +G
Sbjct: 227 LKTLQVFGIVPDGTLQLLKEALPHLQ---INCSHFTTIARPTIG 267
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.7 bits (117), Expect = 6e-07
Identities = 42/276 (15%), Positives = 95/276 (34%), Gaps = 18/276 (6%)
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG 122
+++LT +L D L + + + + + +++ ++LS++
Sbjct: 4 TLDLTGKNLHP--DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 60
Query: 123 K-IPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALD--GNHLDGPIPVSIGNL 178
+ + + L+ L + L+ I + S+L L L + + + +
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 120
Query: 179 SSLVGLYLYNNSLPG------SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232
S L L L ++ ++ L +KN + + + L L
Sbjct: 121 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 180
Query: 233 ELSNNQL-SGSIPQEIGNLKLLTDLSLSQ-NQLRGTVPSSLSNLSSLEILHLYDNQLSGH 290
+LS++ + QE L L LSLS+ + L + +L+ L ++ G
Sbjct: 181 DLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGT 240
Query: 291 IPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQ 326
+ +L + + FT I + +
Sbjct: 241 LQLLKEALPHLQ---INCSHFTTIARPTIGNKKNQE 273
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (113), Expect = 2e-06
Identities = 36/239 (15%), Positives = 70/239 (29%), Gaps = 12/239 (5%)
Query: 339 LPKTLRNCTSLERVRLEKNQL-IGNISDDFGIYPNLKLFDLSYNKFYGE-LSSNWWNCPQ 396
P S + + + + ++ DLS + L C +
Sbjct: 13 HPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSK 72
Query: 397 LGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLE-----LANLTSLNDLILN 451
L L + G ++ I + + L L+ S + L+ + L LN
Sbjct: 73 LQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCF 132
Query: 452 GNQLSGGIPPELGLLTDLGYLDLSA----NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEI 507
+ + L+LS + S +H S +
Sbjct: 133 DFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDC 192
Query: 508 PIQLGKLVQLSELDLSH-NLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGL 565
+ +L L L LS + E E+ + +L+ L + G++ E + L
Sbjct: 193 FQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHL 251
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.3 bits (103), Expect = 3e-05
Identities = 41/285 (14%), Positives = 93/285 (32%), Gaps = 24/285 (8%)
Query: 280 LHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYF-IGS 338
L L L + + + + + + L ++ +Q+ + ++ + +
Sbjct: 5 LDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEVST 62
Query: 339 LPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLG 398
L L C+ L+ + LE +L I + NL +LS + E +
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122
Query: 399 ILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGG 458
+ ++ + + A + +L G N
Sbjct: 123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG----------------YRKNLQKSD 166
Query: 459 IPPELGLLTDLGYLDLSAN-RFSKSIPGNMGYLLKLHYLNMSS-NEFSQEIPIQLGKLVQ 516
+ + +L +LDLS + L L +L++S + E ++LG++
Sbjct: 167 LSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPT 226
Query: 517 LSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFEN 561
L L + + G + E+L L ++ ++ + N
Sbjct: 227 LKTLQVFGIVPDGTLQLLK---EALPHLQINCSHFTTIARPTIGN 268
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 0.001
Identities = 8/87 (9%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 496 LNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSG-S 554
L+++ ++ +L + + + + ++ ++LS++ + +
Sbjct: 5 LDLTGKNLHPDVTGRLLSQ-GVIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEVST 62
Query: 555 IPTNFENMHGLLSIDISYNELDGPIPS 581
+ L ++ + L PI +
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVN 89
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 69.1 bits (167), Expect = 5e-13
Identities = 55/330 (16%), Positives = 100/330 (30%), Gaps = 26/330 (7%)
Query: 227 RKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQ 286
R+ +LEL+N LS S+P+ + L L S N L +P +L SL + +
Sbjct: 38 RQAHELELNNLGLS-SLPELPPH---LESLVASCNSLT-ELPELPQSLKSLLVDNNNLKA 92
Query: 287 LSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS-----------LQYFSVHDNYF 335
LS P ++ N L + I + L++ + +N
Sbjct: 93 LSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQL 152
Query: 336 IGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCP 395
+ + + ++ +
Sbjct: 153 EELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYAD 212
Query: 396 QLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQL 455
+ + + N S + + L+ L + N
Sbjct: 213 NNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNAS 272
Query: 456 SGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLV 515
S I L L L++S N+ +P +L L S N + E+P
Sbjct: 273 SNEIRSLCDLPPSLEELNVSNNKLI-ELPALPP---RLERLIASFNHLA-EVPELPQN-- 325
Query: 516 QLSELDLSHNLLRGEIPPEICNLESLEKLN 545
L +L + +N LR E P ++E L ++N
Sbjct: 326 -LKQLHVEYNPLR-EFPDIPESVEDL-RMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 56.4 bits (134), Expect = 8e-09
Identities = 52/330 (15%), Positives = 90/330 (27%), Gaps = 27/330 (8%)
Query: 253 LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312
+L L+ L ++P +L E L N L+ +P+ + +L + +
Sbjct: 40 AHELELNNLGLS-SLPELPPHL---ESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALS 94
Query: 313 GFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPN 372
P S S K + ++ + P+
Sbjct: 95 DLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVD-------------NNSLKKLPDLPPS 141
Query: 373 LKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLV 432
L+ N+ +P + + + + L
Sbjct: 142 LEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQ 201
Query: 433 GKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLK 492
L + L S + F L +
Sbjct: 202 NLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSE 261
Query: 493 LHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552
L N S EI L EL++S+N L E+P LE +L S N+L+
Sbjct: 262 LPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLE---RLIASFNHLA 317
Query: 553 GSIPTNFENMHGLLSIDISYNELDGPIPSI 582
+P +N L + + YN L P I
Sbjct: 318 -EVPELPQN---LKQLHVEYNPLRE-FPDI 342
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 53.7 bits (127), Expect = 6e-08
Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 209 FLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVP 268
N I S L +L +SNN+L +P L+ L S N L VP
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLE---RLIASFNHL-AEVP 320
Query: 269 SSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLN 302
N L+ LH+ N L P + +L
Sbjct: 321 ELPQN---LKQLHVEYNPLRE-FPDIPESVEDLR 350
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.4 bits (116), Expect = 1e-06
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 10/90 (11%)
Query: 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFG 224
N I SL L + NN L +P+ L L NHL +P
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKL-IELPALPPRLE---RLIASFNHLAE-VPEL-- 322
Query: 225 YLRKLTKLELSNNQLSG--SIPQEIGNLKL 252
+ L +L + N L IP+ + +L++
Sbjct: 323 -PQNLKQLHVEYNPLREFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.1 bits (115), Expect = 2e-06
Identities = 32/163 (19%), Positives = 56/163 (34%), Gaps = 8/163 (4%)
Query: 19 WKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGTLDQF 78
+ + L + + + T P + ++ L + + +
Sbjct: 195 EELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSEN 254
Query: 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138
FS S L N I S L+ LN+S+N ++P+ LE L
Sbjct: 255 IFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPP---RLERLI 310
Query: 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSL 181
NHL +PE+ +LK L ++ N L P ++ L
Sbjct: 311 ASFNHLA-EVPEL--PQNLKQLHVEYNPLRE-FPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 47.5 bits (111), Expect = 5e-06
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEV 136
+ L L L+++ N+L +P+ L +L S NH + ++P L NL+
Sbjct: 277 RSLCDLPPSLEELNVSNNKL-IELPALPPRLERL---IASFNHLA-EVPE---LPQNLKQ 328
Query: 137 LHMFVNHLNGSIPEIGHLSSLKNLALD 163
LH+ N L P+I S+++L ++
Sbjct: 329 LHVEYNPLR-EFPDI--PESVEDLRMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.4 bits (108), Expect = 1e-05
Identities = 56/342 (16%), Positives = 99/342 (28%), Gaps = 30/342 (8%)
Query: 130 LLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNN 189
L L + L+ S+PE+ L++L N L +P +L S L + NN
Sbjct: 36 LDRQAHELELNNLGLS-SLPEL--PPHLESLVASCNSLT-ELPELPQSLKS---LLVDNN 88
Query: 190 SLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGN 249
+L ++ +L L+ ++ + L +++ NN L
Sbjct: 89 NLK-----ALSDLPPLLEYL-GVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSL 142
Query: 250 LKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGN 309
++ + L NL L ++ +N L + + ++
Sbjct: 143 EF------IAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEE 196
Query: 310 QFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGI 369
+ + SL L + L +
Sbjct: 197 LPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIF 256
Query: 370 YPNLKLFDLSYNKFYGELSSNWW--NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFS 427
+L Y P L L ++ N + +P L L S
Sbjct: 257 SGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPR---LERLIAS 312
Query: 428 SNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDL 469
NHL +VP NL L+ + N L P + DL
Sbjct: 313 FNHL-AEVPELPQNLKQLH---VEYNPLR-EFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.3 bits (95), Expect = 4e-04
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 516 QLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575
Q EL+L++ L +P +LESL S N+L+ +P ++ L S+ + N L
Sbjct: 39 QAHELELNNLGLS-SLPELPPHLESL---VASCNSLT-ELPELPQS---LKSLLVDNNNL 90
Query: 576 DG 577
Sbjct: 91 KA 92
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.3 bits (135), Expect = 3e-10
Identities = 30/126 (23%), Positives = 46/126 (36%), Gaps = 8/126 (6%)
Query: 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGS 147
L L L + + L + L+LS N P+ + L LEVL N +
Sbjct: 2 VLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNA-LEN 57
Query: 148 IPEIGHLSSLKNLALDGNHL-DGPIPVSIGNLSSLVGLYLYNNSL---PGSIPSSIGNLS 203
+ + +L L+ L L N L + + LV L L NSL G L
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLP 117
Query: 204 NLVYLF 209
++ +
Sbjct: 118 SVSSIL 123
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 52.0 bits (124), Expect = 1e-08
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 6/107 (5%)
Query: 448 LILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEI 507
L L L+ + L L + +LDLS NR P + L L L S N
Sbjct: 3 LHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALENVD 59
Query: 508 PIQLGKLVQLSELDLSHNLLRG-EIPPEICNLESLEKLNLSHNNLSG 553
+ +Q EL L +N L+ + + L LNL N+L
Sbjct: 60 GVANLPRLQ--ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.8 bits (113), Expect = 4e-07
Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 12/127 (9%)
Query: 158 KNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG 217
+ L L L + + L + L L +N L P+ + L L L N
Sbjct: 1 RVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNA--L 55
Query: 218 PIPSSFGYLRKLTKLELSNNQL-SGSIPQEIGNLKLLTDLSLSQNQL------RGTVPSS 270
L +L +L L NN+L + Q + + L L+L N L + +
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 115
Query: 271 LSNLSSL 277
L ++SS+
Sbjct: 116 LPSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.8 bits (113), Expect = 4e-07
Identities = 23/122 (18%), Positives = 37/122 (30%), Gaps = 7/122 (5%)
Query: 256 LSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFL 315
L L+ L TV L L + L L N+L P + L L N
Sbjct: 3 LHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVD 59
Query: 316 PQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLI---GNISDDFGIYPN 372
++ + + L +C L + L+ N L G + P+
Sbjct: 60 GVANLPRLQELLLC-NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 118
Query: 373 LK 374
+
Sbjct: 119 VS 120
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.6 bits (110), Expect = 8e-07
Identities = 27/119 (22%), Positives = 39/119 (32%), Gaps = 6/119 (5%)
Query: 136 VLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSI 195
VLH+ L + + L + +L L N L P ++ L L L +N
Sbjct: 2 VLHLAHKDLT-VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDN--ALEN 57
Query: 196 PSSIGNLSNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLL 253
+ NL L L L N L+ +L L L N L L +
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEGIQERLAEM 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 45.5 bits (107), Expect = 2e-06
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Query: 399 ILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGG 458
+L +A ++T + + + LD S N L P LA L L +L + +
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLE--VLQASDNALE 56
Query: 459 IPPELGLLTDLGYLDLSANRFSK-SIPGNMGYLLKLHYLNMSSNEFSQE 506
+ L L L L NR + + + +L LN+ N QE
Sbjct: 57 NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.8 bits (100), Expect = 2e-05
Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 424 LDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSI 483
L + L V L L + L L+ N+L +PP L L L L S N
Sbjct: 3 LHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALENVD 59
Query: 484 PGNMGYLLKLHYLNMSSNEFSQEIPIQ-LGKLVQLSELDLSHNLLRGE---IPPEICNLE 539
+L L + +N Q IQ L +L L+L N L E L
Sbjct: 60 GVANLP--RLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLP 117
Query: 540 SLEKL 544
S+ +
Sbjct: 118 SVSSI 122
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 58.5 bits (140), Expect = 5e-10
Identities = 35/227 (15%), Positives = 78/227 (34%), Gaps = 18/227 (7%)
Query: 249 NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGG 308
L ++ ++ + TV + ++L + L + ++ + + NL L +
Sbjct: 17 ALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT--IEGVQYLNNLIGLELKD 72
Query: 309 NQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFG 368
NQ T P + S + + + + + I+D
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKN--------VSAIAGLQSIKTLDLTSTQITDVTP 124
Query: 369 IYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSS 428
+ L L + +++ + ++ N + N ++L L
Sbjct: 125 LAGLSNLQVLYLDLNQ--ITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADD 182
Query: 429 NHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLS 475
N + PL A+L +L ++ L NQ+S P L ++L + L+
Sbjct: 183 NKISDISPL--ASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 53.1 bits (126), Expect = 3e-08
Identities = 29/227 (12%), Positives = 58/227 (25%), Gaps = 18/227 (7%)
Query: 201 NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQ 260
L+N + + K+++ + + L +T L ++ +I + L L L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKD 72
Query: 261 NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320
NQ+ P +L + N + L
Sbjct: 73 NQITDLAPLK----------NLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 122
Query: 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380
+ + + L + L
Sbjct: 123 TPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADD 182
Query: 381 NKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFS 427
NK S + P L + + N I+ P + N + L + +
Sbjct: 183 NKISD--ISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 52.7 bits (125), Expect = 4e-08
Identities = 35/224 (15%), Positives = 73/224 (32%), Gaps = 24/224 (10%)
Query: 78 FPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVL 137
FP ++ + ++ + + +L + L+ + + L NL L
Sbjct: 13 FPDPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT--IEGVQYLNNLIGL 68
Query: 138 HMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPS 197
+ N + P + + + ++ +L +
Sbjct: 69 ELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGL 128
Query: 198 SIGNLSNLVYLFLK---------------KNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242
S + L + + + + L KLT L+ +N++S
Sbjct: 129 SNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI 188
Query: 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQ 286
P + +L L ++ L NQ+ P L+N S+L I+ L NQ
Sbjct: 189 SP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL-TNQ 227
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 49.6 bits (117), Expect = 5e-07
Identities = 40/222 (18%), Positives = 74/222 (33%), Gaps = 22/222 (9%)
Query: 103 PIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162
P L + ++ + + L + L F + +I + +L++L L L
Sbjct: 14 PDPALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIEGVQYLNNLIGLEL 70
Query: 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSS 222
N + P+ + + L +I + + + S+
Sbjct: 71 KDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSN 130
Query: 223 FGYLRKLTKL--------------ELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVP 268
L LS S + NL LT L N++ P
Sbjct: 131 LQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP 190
Query: 269 SSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQ 310
L++L +L +HL +NQ+S P + N NL +++ NQ
Sbjct: 191 --LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL-TNQ 227
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 46.6 bits (109), Expect = 5e-06
Identities = 30/227 (13%), Positives = 60/227 (26%), Gaps = 18/227 (7%)
Query: 273 NLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHD 332
L++ + + ++ + Q + + +LS G T + + +L + D
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKD 72
Query: 333 NYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW 392
N L K + + +
Sbjct: 73 NQI----------TDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV 122
Query: 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNG 452
I A + S + LANL+ L L +
Sbjct: 123 TPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADD 182
Query: 453 NQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMS 499
N++S L L +L + L N+ S P + L + ++
Sbjct: 183 NKISD--ISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 43/218 (19%), Positives = 68/218 (31%), Gaps = 29/218 (13%)
Query: 62 ISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFS 121
I I +++ T+ + ++ L + + L L L L N
Sbjct: 22 IKIAAGKSNVTDTV---TQADLDGITTLSAFGTGV--TTIEGVQYLNNLIGLELKDNQI- 75
Query: 122 GKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSL 181
+ + LT + L + N L G S D + NL L
Sbjct: 76 -TDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVL 134
Query: 182 -----------------VGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFG 224
YL + S + + NLS L L N + P
Sbjct: 135 YLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LA 192
Query: 225 YLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQ 262
L L ++ L NNQ+S P + N L ++L+ NQ
Sbjct: 193 SLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT-NQ 227
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 30/214 (14%), Positives = 62/214 (28%), Gaps = 22/214 (10%)
Query: 372 NLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHL 431
N + ++ + + L G +T + L L+ N +
Sbjct: 20 NAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTT--IEGVQYLNNLIGLELKDNQI 75
Query: 432 VGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLL 491
PL+ + +L N + I + T + + N+ L
Sbjct: 76 TDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLY 135
Query: 492 KLHYL--------------NMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICN 537
+S L L +L+ L N + P + +
Sbjct: 136 LDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LAS 193
Query: 538 LESLEKLNLSHNNLSGSIPTNFENMHGLLSIDIS 571
L +L +++L +N +S P N L + ++
Sbjct: 194 LPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 44.3 bits (103), Expect = 3e-05
Identities = 34/207 (16%), Positives = 56/207 (27%), Gaps = 16/207 (7%)
Query: 342 TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILK 401
T + + + + I NL +L N+ L
Sbjct: 36 TQADLDGITTLSAFGTG-VTTIEG-VQYLNNLIGLELKDNQITDLAPLKNLTKITELELS 93
Query: 402 IAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPP 461
I T ++ L L + I N + L+G
Sbjct: 94 GNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNL 153
Query: 462 ELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELD 521
+ S S + L KL L N+ S P L L L E+
Sbjct: 154 QYL----------SIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVH 201
Query: 522 LSHNLLRGEIPPEICNLESLEKLNLSH 548
L +N + P + N +L + L++
Sbjct: 202 LKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 42.3 bits (98), Expect = 1e-04
Identities = 34/189 (17%), Positives = 63/189 (33%), Gaps = 9/189 (4%)
Query: 2 SLNVASNSIEAARGL--LKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAG 59
+L+ + G+ L L+ +N + L + + +
Sbjct: 45 TLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIA 104
Query: 60 RIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNH 119
+ SI + D P + S+L L L+ NQ+ P LS +
Sbjct: 105 GLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLT----NLQYLSIGN 160
Query: 120 FSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLS 179
+ + L+ L L N ++ I + L +L + L N + P + N S
Sbjct: 161 AQVSDLTPLANLSKLTTLKADDNKISD-ISPLASLPNLIEVHLKNNQISDVSP--LANTS 217
Query: 180 SLVGLYLYN 188
+L + L N
Sbjct: 218 NLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 40.0 bits (92), Expect = 6e-04
Identities = 34/226 (15%), Positives = 69/226 (30%), Gaps = 18/226 (7%)
Query: 154 LSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKN 213
L++ +A +++ + + +L + L + + + + L+NL+ L LK N
Sbjct: 18 LANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGV--TTIEGVQYLNNLIGLELKDN 73
Query: 214 HLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSN 273
+ P +L + + +I L + + S+L
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 274 LSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDN 333
L + L+G + + N + L DN
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSD----------LTPLANLSKLTTLKADDN 183
Query: 334 YFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLS 379
P L + +L V L+ NQ+ NL + L+
Sbjct: 184 KISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 55.4 bits (132), Expect = 4e-09
Identities = 23/203 (11%), Positives = 56/203 (27%), Gaps = 16/203 (7%)
Query: 226 LRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN 285
+ K L ++ ++ Q L + + + + ++ + L ++ L L N
Sbjct: 23 FAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGN 78
Query: 286 QLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRN 345
+L+ P + L + L + + L +
Sbjct: 79 KLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLES 138
Query: 346 CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGN 405
+ L D + ++ D+ +L L ++ N
Sbjct: 139 LYLGNNKITDITVLSRLTKLDTLSLEDNQISDI----------VPLAGLTKLQNLYLSKN 188
Query: 406 NITGGIPPEIGNATQLHELDFSS 428
+I+ + L L+ S
Sbjct: 189 HISD--LRALAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 48.9 bits (115), Expect = 6e-07
Identities = 53/226 (23%), Positives = 82/226 (36%), Gaps = 18/226 (7%)
Query: 38 PVNATNITTPCTWSGISCNHA-GRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQL 96
P+ + IT P I + A I NL S+ + Q + + + + N + +
Sbjct: 2 PLGSETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQ---NELNSIDQIIANNSDI 58
Query: 97 YGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSS 156
I L + L L+ N + P L NL+ L N
Sbjct: 59 KS--VQGIQYLPNVTKLFLNGNKLTDIKP-----LANLKNLGWLFLDENKVKDLSSLKDL 111
Query: 157 LKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLR 216
K +L H + +L L LYL NN + + + L+ L L L+ N +
Sbjct: 112 KKLKSLSLEHNGISDINGLVHLPQLESLYLGNN--KITDITVLSRLTKLDTLSLEDNQIS 169
Query: 217 GPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQ 262
+P L KL L LS N +S + + LK L L L +Q
Sbjct: 170 DIVP--LAGLTKLQNLYLSKNHISD--LRALAGLKNLDVLELF-SQ 210
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 48.1 bits (113), Expect = 1e-06
Identities = 32/213 (15%), Positives = 72/213 (33%), Gaps = 21/213 (9%)
Query: 100 IPSPIG------NLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGH 153
+P+PI + NL + + L +++ + + + S+ I +
Sbjct: 10 VPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIK-SVQGIQY 66
Query: 154 LSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKN 213
L ++ L L+GN L L++L L S + ++
Sbjct: 67 LPNVTKLFLNGNKLTDIK-----PLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEH 121
Query: 214 HLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSN 273
+ I + + +N ++ + L L+ + + L+
Sbjct: 122 NGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDI-----VPLAG 176
Query: 274 LSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSV 306
L+ L+ L+L N +S + + NL+ L +
Sbjct: 177 LTKLQNLYLSKNHISD--LRALAGLKNLDVLEL 207
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 48.1 bits (113), Expect = 1e-06
Identities = 39/240 (16%), Positives = 75/240 (31%), Gaps = 46/240 (19%)
Query: 242 SIPQEIG------NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEI 295
++P I +L + + V + + L+S++ + ++ + Q I
Sbjct: 9 TVPTPIKQIFSDDAFAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS--VQGI 64
Query: 296 GNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355
N+ L + GN+ T P ++ + + + +
Sbjct: 65 QYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKD--------LSSLKDLKKLKS 116
Query: 356 KNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEI 415
+ ISD G+ +L L + +L L + N I+ +P
Sbjct: 117 LSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--- 173
Query: 416 GNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLS 475
LA LT L +L L+ N +S L L +L L+L
Sbjct: 174 -----------------------LAGLTKLQNLYLSKNHISD--LRALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 41.1 bits (95), Expect = 2e-04
Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 26/196 (13%)
Query: 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNG 452
+ + ++T + + ++ +++ + ++ L ++ L LNG
Sbjct: 22 AFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQGIQ--YLPNVTKLFLNG 77
Query: 453 NQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGY-----------------LLKLHY 495
N+L+ L L +LG+L L N+ L+ L
Sbjct: 78 NKLTD--IKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQ 135
Query: 496 LNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSI 555
L ++ I + + + + +I P + L L+ L LS N++S +
Sbjct: 136 LESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHIS-DL 193
Query: 556 PTNFENMHGLLSIDIS 571
+ L +++
Sbjct: 194 R-ALAGLKNLDVLELF 208
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (133), Expect = 4e-09
Identities = 37/244 (15%), Positives = 69/244 (28%), Gaps = 20/244 (8%)
Query: 48 CTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNL 107
C+ C + + + P L + L +L
Sbjct: 8 CSNRVFLCQESK---------------VTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGF 52
Query: 108 TKLKFLNLSSNHFSGKI---PSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDG 164
L+ + +S N I + + N L + +L +L+ L +
Sbjct: 53 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISN 112
Query: 165 NHLDGPIPVSIGNLSSLVGLYLYN--NSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSS 222
+ V + V L + + N S +G V L+L KN ++ +
Sbjct: 113 TGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCA 172
Query: 223 FGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHL 282
F + NN L L +S+ ++ L NL L
Sbjct: 173 FNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232
Query: 283 YDNQ 286
Y+ +
Sbjct: 233 YNLK 236
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.9 bits (117), Expect = 4e-07
Identities = 27/229 (11%), Positives = 61/229 (26%), Gaps = 7/229 (3%)
Query: 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289
++++ IP ++ + +L +LR + S LE + + N +
Sbjct: 11 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE 67
Query: 290 HIPQEIGNFMNLNSLSVGG----NQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRN 345
I ++ + + + + S + + K
Sbjct: 68 VIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSL 127
Query: 346 CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGN 405
L ++ N + G+ + L+ N + + + N
Sbjct: 128 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNN 187
Query: 406 NITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQ 454
N+ A+ LD S + L NL L +
Sbjct: 188 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.6 bits (98), Expect = 1e-04
Identities = 34/225 (15%), Positives = 67/225 (29%), Gaps = 11/225 (4%)
Query: 338 SLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQL 397
+P L + +R +L F + +L+ ++S N + ++ ++
Sbjct: 22 EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 79
Query: 398 GI--LKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNG--N 453
NN+ P N L L S+ + + + L + N
Sbjct: 80 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN 139
Query: 454 QLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGK 513
+ +GL + L L+ N + +N +
Sbjct: 140 IHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHG 199
Query: 514 LVQLSELDLSHNLLRGEIPPEIC-NLESLEKLNLSHNNLSGSIPT 557
LD+S + +P NL+ L + NL +PT
Sbjct: 200 ASGPVILDISRTRIH-SLPSYGLENLKKLRARST--YNLK-KLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (88), Expect = 0.002
Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Query: 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGN 106
+ ++ +NL+ + L F S LD++ +++ + N
Sbjct: 164 GIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 223
Query: 107 LTKLKFLNLSSNHFSGKIPS 126
L KL+ + + K+P+
Sbjct: 224 LKKLRARSTYNL---KKLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (86), Expect = 0.003
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 524 HNLLRGEIPPEI-CNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI 582
N E+P ++ L++S + EN+ L + + +P++
Sbjct: 185 DNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---KLPTL 241
Query: 583 E 583
E
Sbjct: 242 E 242
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 52.5 bits (124), Expect = 4e-08
Identities = 32/223 (14%), Positives = 62/223 (27%), Gaps = 41/223 (18%)
Query: 48 CTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNL 107
C + + C G L + P + H + L LN+N+L +
Sbjct: 8 CEGTTVDCTGRG---------------LKEIPRDIPLHTTELLLNDNELGRISSDGLFGR 52
Query: 108 TKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHL 167
+ I + + I
Sbjct: 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEIS------------------ 94
Query: 168 DGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLR 227
L L L LY+N + +P S +L++L L L N +
Sbjct: 95 ----NKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC-NCHLAWFAE 149
Query: 228 KLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSS 270
L K L+ P ++ ++++ L ++ + + +S
Sbjct: 150 WLRKKSLNGGAARCGAPSKVRDVQI---KDLPHSEFKCSSENS 189
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 44.0 bits (102), Expect = 2e-05
Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 8/178 (4%)
Query: 184 LYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSF-GYLRKLTKLELSNNQLSGS 242
+ L IP I + L L N L G L L KLEL NQL+G
Sbjct: 13 VDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGI 69
Query: 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLN 302
P + +L L +N+++ L L+ L+LYDNQ+S +P + +L
Sbjct: 70 EPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129
Query: 303 SLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLI 360
SL++ N F + S++ P +R+ + L ++
Sbjct: 130 SLNLASNPFNCNCHLAWFAEWLRK-KSLNGGAARCGAPSKVRDVQIKD---LPHSEFK 183
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 42.5 bits (98), Expect = 6e-05
Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 4/165 (2%)
Query: 444 SLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNM-GYLLKLHYLNMSSNE 502
+ G L IP + L L+ N + + G L L L + N+
Sbjct: 9 EGTTVDCTGRGLKE-IPR--DIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ 65
Query: 503 FSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENM 562
+ P + EL L N ++ L L+ LNL N +S +P +FE++
Sbjct: 66 LTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHL 125
Query: 563 HGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQ 607
+ L S++++ N + ++L G CG S ++
Sbjct: 126 NSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVR 170
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 53.7 bits (127), Expect = 5e-08
Identities = 44/356 (12%), Positives = 95/356 (26%), Gaps = 49/356 (13%)
Query: 227 RKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG----TVPSSLSNLSSLEILHL 282
+ L ++ S+ + + ++ LS N + + ++++ LEI
Sbjct: 8 KSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEF 66
Query: 283 YDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKT 342
D + + L Q + + L + DN F + +
Sbjct: 67 SDIFT--------------GRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEP 112
Query: 343 LRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKI 402
L + S + G ++ N P L +
Sbjct: 113 LIDFLSKHTPLEHLYLHNNGLGPQAGAKIA-------RALQELAVNKKAKNAPPLRSIIC 165
Query: 403 AGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE 462
N + G E Q H L + + + E + L G+
Sbjct: 166 GRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEG-----------IEHLLLEGLAYC 214
Query: 463 LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG------KLVQ 516
L + + S ++ + L L ++ S + + +
Sbjct: 215 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIG 274
Query: 517 LSELDLSHNLLRGEIPPEIC-----NLESLEKLNLSHNNLSGSIPTNFENMHGLLS 567
L L L +N + + + + L L L+ N + + + S
Sbjct: 275 LQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF-SEEDDVVDEIREVFS 329
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 41.8 bits (96), Expect = 3e-04
Identities = 40/338 (11%), Positives = 87/338 (25%), Gaps = 45/338 (13%)
Query: 133 NLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLP 192
+L++ + + S+K + L GN +
Sbjct: 9 SLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTI--------------------GTEAA 48
Query: 193 GSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS---GSIPQEIGN 249
+ +I + +L LR L + L +L S
Sbjct: 49 RWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPT 108
Query: 250 LKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGN 309
+ LS++ + + L + + ++ N L S+ G N
Sbjct: 109 AQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 168
Query: 310 QFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGI 369
+ + ++ + R ++ L+ ++ +
Sbjct: 169 RLENGSMKEWAKTFQSHRLLHTVKM-----------VQNGIRPEGIEHLLLEGLAYCQEL 217
Query: 370 YPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNA------TQLHE 423
+ + L+ + P L L + ++ + +A L
Sbjct: 218 KVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQT 277
Query: 424 LDFSSNHLVGKVPLELA-----NLTSLNDLILNGNQLS 456
L N + L + L L LNGN+ S
Sbjct: 278 LRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.9 bits (91), Expect = 0.001
Identities = 13/93 (13%), Positives = 27/93 (29%), Gaps = 6/93 (6%)
Query: 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPI-- 104
+ L++ +D F L L L N++ + +
Sbjct: 236 AIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKT 295
Query: 105 ---GNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134
+ L FL L+ N F + + + +
Sbjct: 296 VIDEKMPDLLFLELNGNRF-SEEDDVVDEIREV 327
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (120), Expect = 4e-07
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 229 LTKLELSNNQLSGS-IPQEIGNLKLLTDLSLSQNQLRG----TVPSSLSNLSSLEILHLY 283
+ L++ +LS + + + L+ + L L + S+L +L L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 284 DNQLSGHIPQEIGNFMNLNSLSV 306
N+L + + S +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKI 86
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.0 bits (117), Expect = 1e-06
Identities = 53/451 (11%), Positives = 104/451 (23%), Gaps = 23/451 (5%)
Query: 86 LSYLDLNENQLYGN-IPSPIGNLTKLKFLNLSSNHFSGK----IPSEIGLLTNLEVLHMF 140
+ LD+ +L + L + + + L + I S + + L L++
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 141 VNHLNGSIPEI------GHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194
N L ++ L+L L G + + + +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 123
Query: 195 IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLT 254
+ + L L + + + L + N +
Sbjct: 124 LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 183
Query: 255 DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314
Q P L L DN + +L G
Sbjct: 184 AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGM 243
Query: 315 LPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLK 374
+ G K + + R + +L ++ L
Sbjct: 244 AELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLL 303
Query: 375 LFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGK 434
L E + + + D L
Sbjct: 304 CETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC-- 361
Query: 435 VPLELANLTSLNDLILNGNQLSG----GIPPELGLLTDLGYLDLSANRFSKSIPGNMGYL 490
+ L L L +S + L L LDLS N + +
Sbjct: 362 -QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVES 420
Query: 491 LK-----LHYLNMSSNEFSQEIPIQLGKLVQ 516
++ L L + +S+E+ +L L +
Sbjct: 421 VRQPGCLLEQLVLYDIYWSEEMEDRLQALEK 451
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (115), Expect = 2e-06
Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 5/101 (4%)
Query: 468 DLGYLDLSANRFS-KSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQ----LSELDL 522
D+ LD+ S + L + + + ++ + ++ L+EL+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 523 SHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMH 563
N L + + +L T
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGV 103
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.8 bits (114), Expect = 2e-06
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 491 LKLHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHNLLRGE----IPPEICNLESLEKLN 545
L + L++ E S +L L Q + L L I + +L +LN
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 546 LSHNNLSGSIPTNFENMHGLLSIDISYNELD 576
L N L + GL + +L
Sbjct: 62 LRSNELGDVGVHCV--LQGLQTPSCKIQKLS 90
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (111), Expect = 5e-06
Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 9/80 (11%)
Query: 492 KLHYLNMSSNEFSQE----IPIQLGKLVQLSELDLSHNLLRGEIPPEIC-----NLESLE 542
L L ++ + S + L L ELDLS+N L ++ LE
Sbjct: 370 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 429
Query: 543 KLNLSHNNLSGSIPTNFENM 562
+L L S + + +
Sbjct: 430 QLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (110), Expect = 7e-06
Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 10/109 (9%)
Query: 204 NLVYLFLKKNHLR-GPIPSSFGYLRKLTKLELSNNQLSG----SIPQEIGNLKLLTDLSL 258
++ L ++ L L++ + L + L+ I + L +L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 259 SQNQLRGTVPSSL-----SNLSSLEILHLYDNQLSGHIPQEIGNFMNLN 302
N+L + + ++ L L + L+G + + +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTL 111
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.4 bits (105), Expect = 2e-05
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 5/68 (7%)
Query: 515 VQLSELDLSHNLLRGEIPPEIC-NLESLEKLNLSHNNLSG----SIPTNFENMHGLLSID 569
+ + LD+ L E+ L+ + + L L+ I + L ++
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 570 ISYNELDG 577
+ NEL
Sbjct: 62 LRSNELGD 69
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.6 bits (103), Expect = 4e-05
Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 13/93 (13%)
Query: 201 NLSNLVYLFLKKNHLRG----PIPSSFGYLRKLTKLELSNNQLSGSIPQEIG-----NLK 251
S L L+L + + ++ L +L+LSNN L + ++
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 252 LLTDLSLSQNQLRGTVPSSLSNLS----SLEIL 280
LL L L + L L SL ++
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (100), Expect = 1e-04
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 9/84 (10%)
Query: 77 QFPFSLFSHLSYLDLNENQL----YGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIG--- 129
Q S L L L + + ++ + + L+ L+LS+N ++
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 130 --LLTNLEVLHMFVNHLNGSIPEI 151
LE L ++ + + + +
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDR 445
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 12/93 (12%)
Query: 469 LGYLDLSANRFS----KSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQ-----LSE 519
L L L+ S S+ + L L++S+N +QL + V+ L +
Sbjct: 371 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQ 430
Query: 520 LDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552
L L E+ L++LEK S +S
Sbjct: 431 LVLYDIYWSEEMEDR---LQALEKDKPSLRVIS 460
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (94), Expect = 6e-04
Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 10/93 (10%)
Query: 372 NLKLFDLSYNKFYGE-LSSNWWNCPQLGILKIAGNNITGGIPPEIGNA----TQLHELDF 426
+++ D+ + + Q ++++ +T +I +A L EL+
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 427 SSNHLVGKVPLELA-----NLTSLNDLILNGNQ 454
SN L + + L L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (94), Expect = 6e-04
Identities = 58/427 (13%), Positives = 112/427 (26%), Gaps = 25/427 (5%)
Query: 180 SLVGLYLYNNSL-PGSIPSSIGNLSNLVYLFLKKNHLRG----PIPSSFGYLRKLTKLEL 234
+ L + L + L + L L I S+ L +L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 235 SNNQLSGSIPQEIG-----NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN---Q 286
+N+L + + LSL L G LS+ +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDN 122
Query: 287 LSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNC 346
L G ++ L+ + + L F
Sbjct: 123 LLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 182
Query: 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNN 406
+ RV + + + + D + S LG K+
Sbjct: 183 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 242
Query: 407 ITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLL 466
+ P + +++L L + K +L + + + + + E L
Sbjct: 243 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARL 302
Query: 467 TDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNL 526
L+ S + + S+ +Q + ++ D
Sbjct: 303 LCETLLEPGCQLESLWVKSCSFT---AACCSHFSSVLAQNRFLLELQISNNRLEDAGVRE 359
Query: 527 LRGEIPPEICNLESLEKLNLSHNNLSG----SIPTNFENMHGLLSIDISYNEL--DGPIP 580
L + L L L+ ++S S+ H L +D+S N L G +
Sbjct: 360 LCQGLGQPGSVLRVL---WLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQ 416
Query: 581 SIEAFRH 587
+E+ R
Sbjct: 417 LVESVRQ 423
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (89), Expect = 0.002
Identities = 10/86 (11%), Positives = 25/86 (29%), Gaps = 9/86 (10%)
Query: 370 YPNLKLFDLSYNKFYGE----LSSNWWNCPQLGILKIAGNNITGGIPPEIGNA-----TQ 420
L++ L+ L++ L L ++ N + ++ +
Sbjct: 368 GSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCL 427
Query: 421 LHELDFSSNHLVGKVPLELANLTSLN 446
L +L + ++ L L
Sbjct: 428 LEQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (87), Expect = 0.004
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 9/86 (10%)
Query: 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQL----YGNIPSPIGNLTKLKFLNLSSN 118
S+++ L L + L++ L +I S + L LNL SN
Sbjct: 6 SLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSN 65
Query: 119 HFSGKIPSEIG-----LLTNLEVLHM 139
+ ++ L +
Sbjct: 66 ELGDVGVHCVLQGLQTPSCKIQKLSL 91
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 9e-07
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 5/146 (3%)
Query: 434 KVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKL 493
++ L ++ + L+ L P+L L+ + + ++ + +L
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGLR--SDPDLVAQNIDVVLNRR-SSMAATLRIIEENIPEL 67
Query: 494 HYLNMSSNEFS--QEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNL 551
LN+S+N ++ + K L L+LS N L+ E + LE+L L N+L
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127
Query: 552 SGSIPTNFENMHGLLSIDISYNELDG 577
S + + + LDG
Sbjct: 128 SDTFRDQSTYISAIRERFPKLLRLDG 153
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (106), Expect = 6e-06
Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 5/146 (3%)
Query: 459 IPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS 518
+ + D L ++ LN S+ + + I + +L
Sbjct: 12 LKLIMSKRYDGSQQALDLKGLRS--DPDLVAQNIDVVLNRRSS-MAATLRIIEENIPELL 68
Query: 519 ELDLSHNLLRG--EIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576
L+LS+N L ++ + +L+ LNLS N L + L + + N L
Sbjct: 69 SLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128
Query: 577 GPIPSIEAFRHAPVEALQGNKGLCGE 602
+ A E L G
Sbjct: 129 DTFRDQSTYISAIRERFPKLLRLDGH 154
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (98), Expect = 6e-05
Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 194 SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLL 253
+ + + L LR L ++ + ++ N+ L
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGLR--SDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPEL 67
Query: 254 TDLSLSQNQLRGT--VPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQF 311
L+LS N+L + S + +L+IL+L N+L + + L L + GN
Sbjct: 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSL 127
Query: 312 TGFLPQN 318
+
Sbjct: 128 SDTFRDQ 134
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (93), Expect = 3e-04
Identities = 24/126 (19%), Positives = 42/126 (33%), Gaps = 5/126 (3%)
Query: 171 IPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT 230
+ + + L L + + V L + + + + + +L
Sbjct: 12 LKLIMSKRYDGSQQALDLKGLR--SDPDLVAQNIDVVLNRR-SSMAATLRIIEENIPELL 68
Query: 231 KLELSNNQLSG--SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288
L LSNN+L + + L L+LS N+L+ LE L L N LS
Sbjct: 69 SLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128
Query: 289 GHIPQE 294
+
Sbjct: 129 DTFRDQ 134
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.0 bits (90), Expect = 7e-04
Identities = 21/124 (16%), Positives = 35/124 (28%), Gaps = 2/124 (1%)
Query: 109 KLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLD 168
+ L+L + + L L I L SL NL+ + +
Sbjct: 23 SQQALDLKGLRSDPDL-VAQNIDVVLNRRSSMAATLRIIEENIPELLSL-NLSNNRLYRL 80
Query: 169 GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRK 228
+ + +L L L N L L L+L N L Y+
Sbjct: 81 DDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140
Query: 229 LTKL 232
+ +
Sbjct: 141 IRER 144
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (86), Expect = 0.002
Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 62 ISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYG--NIPSPIGNLTKLKFLNLSSNH 119
I + L S + L L+L+ N+LY ++ S + LK LNLS N
Sbjct: 43 IDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE 102
Query: 120 FSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGH-----LSSLKNL-ALDGNHLDGPI 171
+ + LE L + N L+ + + L LDG+ L PI
Sbjct: 103 LKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLDGHELPPPI 160
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.1 bits (85), Expect = 0.003
Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 7/128 (5%)
Query: 371 PNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNH 430
+ + DL + +L + + ++ +++ + N +L L+ S+N
Sbjct: 22 GSQQALDLKGLRSDPDLVAQ-----NIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNR 76
Query: 431 LVGKVPLE--LANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMG 488
L + + +L L L+GN+L + L L L N S +
Sbjct: 77 LYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136
Query: 489 YLLKLHYL 496
Y+ +
Sbjct: 137 YISAIRER 144
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.6 bits (101), Expect = 2e-05
Identities = 20/146 (13%), Positives = 40/146 (27%), Gaps = 4/146 (2%)
Query: 320 CQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNI-SDDFGIYPNLKLFDL 378
C + + L +L + +E Q + ++ D L+ +
Sbjct: 5 CCPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTI 63
Query: 379 SYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLV-GKVPL 437
+ + P+L L ++ N + + + L EL S N L
Sbjct: 64 VKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALR 122
Query: 438 ELANLTSLNDLILNGNQLSGGIPPEL 463
L + +L L
Sbjct: 123 WLQRWEEEGLGGVPEQKLQCHGQGPL 148
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.5 bits (93), Expect = 2e-04
Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 4/134 (2%)
Query: 229 LTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPS-SLSNLSSLEILHLYDNQL 287
+ L + + + + LT+L + Q + L L L L + + L
Sbjct: 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68
Query: 288 SGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSL-PKTLRNC 346
P L+ L++ N L Q SLQ + N S + L+
Sbjct: 69 RFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRW 127
Query: 347 TSLERVRLEKNQLI 360
+ + +L
Sbjct: 128 EEEGLGGVPEQKLQ 141
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.2 bits (92), Expect = 3e-04
Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 4/147 (2%)
Query: 394 CPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLEL-ANLTSLNDLILNG 452
L+ + + A L EL + + + L L L +L +
Sbjct: 7 PHGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVK 65
Query: 453 NQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQ-L 511
+ L P L L+LS N S+ L L L +S N ++ L
Sbjct: 66 SGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALRWL 124
Query: 512 GKLVQLSELDLSHNLLRGEIPPEICNL 538
+ + + L+ + ++
Sbjct: 125 QRWEEEGLGGVPEQKLQCHGQGPLAHM 151
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (85), Expect = 0.003
Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 2/109 (1%)
Query: 493 LHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEIC-NLESLEKLNLSHNNL 551
L + + + L L+EL + + + L L L + + L
Sbjct: 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68
Query: 552 SGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLC 600
P F L +++S+N L+ L GN C
Sbjct: 69 RFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHC 117
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 198 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 43.9 bits (102), Expect = 3e-05
Identities = 32/166 (19%), Positives = 49/166 (29%), Gaps = 20/166 (12%)
Query: 228 KLTKLELSNNQLSGSIP------QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILH 281
+ E +L G IP + LK L+LS N + SSLS + +L IL
Sbjct: 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNI--EKISSLSGMENLRILS 76
Query: 282 LYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPK 341
L N + + + L + ++
Sbjct: 77 LGRNL--IKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEID 134
Query: 342 TLRNCTSLERVRLEKNQLIGNISDDFGIY----------PNLKLFD 377
L LE + L N L + ++ PNLK D
Sbjct: 135 KLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 198 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 40.1 bits (92), Expect = 6e-04
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 67 TSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIP------SPIGNLTKLKFLNLSSNHF 120
+T++K + F + + + +L+G IP + + L K L LS+N+
Sbjct: 3 KATTIKDAIRIF--EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNI 60
Query: 121 SGKIPSEIGLLTNLEVLHMFVNH 143
KI S + + NL +L + N
Sbjct: 61 E-KISS-LSGMENLRILSLGRNL 81
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 198 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 37.4 bits (85), Expect = 0.004
Identities = 25/179 (13%), Positives = 54/179 (30%), Gaps = 25/179 (13%)
Query: 242 SIPQEIGNLKLLTD---LSLSQNQLRGTVP------SSLSNLSSLEILHLYDNQLSGHIP 292
+I I + + +L G +P ++LS L + + L L N +
Sbjct: 6 TIKDAIRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE---- 61
Query: 293 QEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERV 352
+I + + +L + + + + +Y + + +L +
Sbjct: 62 -KISSLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVL 120
Query: 353 RLEKNQLIGNISDDF-GIYPNLKLFDLSYNKFYGELSSNWW----------NCPQLGIL 400
+ N++ D L+ L+ N Y + N P L L
Sbjct: 121 YMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKL 179
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 9e-05
Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 500 SNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNF 559
+ E ++ Q V+ ELDL + I L+ + ++ S N + F
Sbjct: 4 TAELIEQAA-QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEI--RKLDGF 59
Query: 560 ENMHGLLSIDISYNELDGPIP 580
+ L ++ ++ N +
Sbjct: 60 PLLRRLKTLLVNNNRICRIGE 80
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.5 bits (91), Expect = 5e-04
Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 8/134 (5%)
Query: 80 FSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHM 139
++ LDL ++ I + L + ++ S N + LL L+ L +
Sbjct: 14 YTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEI--RKLDGFPLLRRLKTLLV 70
Query: 140 FVNHLNGSIPEIGHLSSLKNLALDGNH--LDGPIPVSIGNLSSLVGLYLYN---NSLPGS 194
N + + + N+ ++ + +L SL L + +
Sbjct: 71 NNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHY 130
Query: 195 IPSSIGNLSNLVYL 208
I + + L
Sbjct: 131 RLYVIYKVPQVRVL 144
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.6 bits (86), Expect = 0.002
Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 7/142 (4%)
Query: 386 ELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSL 445
E ++ + N + L + G I I Q +DFS N + L L
Sbjct: 9 EQAAQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDGFP--LLRRL 65
Query: 446 NDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ 505
L++N N++ L DL L L+ N + + LK
Sbjct: 66 KTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 125
Query: 506 EIPIQ----LGKLVQLSELDLS 523
+ K+ Q+ LD
Sbjct: 126 NKKHYRLYVIYKVPQVRVLDFQ 147
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 40/239 (16%), Positives = 68/239 (28%), Gaps = 48/239 (20%)
Query: 242 SIPQEIG--------NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQ 293
+I Q+ L L + + TV S ++L + L +
Sbjct: 1 TITQDTPINQIFTDTALAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKS--ID 56
Query: 294 EIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVR 353
+ NL ++ NQ T P L+ + + + + +
Sbjct: 57 GVEYLNNLTQINFSNNQLTDITP--------LKNLTKLVDILMNNNQIADITPLANLTNL 108
Query: 354 LEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPP 413
I+D + L L + S L L + N +T P
Sbjct: 109 TGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKP- 167
Query: 414 EIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYL 472
LANLT+L L ++ N++S L LT+L L
Sbjct: 168 -------------------------LANLTTLERLDISSNKVSD--ISVLAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 40.4 bits (93), Expect = 4e-04
Identities = 29/202 (14%), Positives = 63/202 (31%), Gaps = 15/202 (7%)
Query: 103 PIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162
L + L + + + L + L + SI + +L++L +
Sbjct: 13 TDTALAEKMKTVLGKTNVTDTVSQTD--LDQVTTLQADRLGIK-SIDGVEYLNNLTQINF 69
Query: 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSS 222
N L P+ + + + + + ++ + ++
Sbjct: 70 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 129
Query: 223 FGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHL 282
L S +I L + L+ + + T L+NL++LE L +
Sbjct: 130 LNRL----------ELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDI 179
Query: 283 YDNQLSGHIPQEIGNFMNLNSL 304
N++S + NL SL
Sbjct: 180 SSNKVSD--ISVLAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 38.9 bits (89), Expect = 0.001
Identities = 29/196 (14%), Positives = 56/196 (28%), Gaps = 25/196 (12%)
Query: 78 FPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVL 137
F + + L + + + +L ++ L + L NL +
Sbjct: 12 FTDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQI 67
Query: 138 HMFVNHLNGSIP-----------------EIGHLSSLKNLALDGNHLDGPIPVSIGNLSS 180
+ N L P + + I +
Sbjct: 68 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNL 127
Query: 181 LVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240
L +S S S++ L++L L N + P L L +L++S+N++S
Sbjct: 128 TNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVS 185
Query: 241 GSIPQEIGNLKLLTDL 256
+ L L L
Sbjct: 186 D--ISVLAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.3 bits (85), Expect = 0.004
Identities = 32/136 (23%), Positives = 50/136 (36%), Gaps = 2/136 (1%)
Query: 2 SLNVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRI 61
+N ++N + L + N+ + N TN+T ++ +
Sbjct: 66 QINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLK 125
Query: 62 ISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFS 121
NL L +L S LN + P+ NLT L+ L++SSN S
Sbjct: 126 NLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVS 185
Query: 122 GKIPSEIGLLTNLEVL 137
S + LTNLE L
Sbjct: 186 D--ISVLAKLTNLESL 199
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 964 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.96 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.96 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.96 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.95 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.93 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.92 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.91 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.9 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.9 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.85 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.83 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.82 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.79 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.78 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.78 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.78 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.77 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.76 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.75 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.75 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.75 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.74 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.73 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.73 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.52 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.51 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.51 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.5 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.5 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.49 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.49 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.48 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.38 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.33 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.29 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.26 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.62 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.61 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.44 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.85 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.75 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.7 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.15 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.13 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.05 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.01 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.46 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 95.64 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-49 Score=416.67 Aligned_cols=257 Identities=25% Similarity=0.424 Sum_probs=205.8
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||+||+|+++ ..||||+++.........+.|.+|+.++++++|||||++++++.+ ...++|||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence 357899999999999999999875 469999997655556667889999999999999999999998754 56899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS- 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 846 (964)
|+++|+|.+++.... ..+++..+..++.||++||+|||++ +||||||||+|||++.++.+||+|||+|+......
T Consensus 84 y~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~ 159 (276)
T d1uwha_ 84 WCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159 (276)
T ss_dssp CCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC------
T ss_pred cCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccccCC
Confidence 999999999997543 3589999999999999999999999 99999999999999999999999999998765432
Q ss_pred -CCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 847 -SNWSELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 847 -~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.......||+.|||||++.+ ..|+.++|||||||++|||+||+.||..... ...+.........+
T Consensus 160 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~-----------~~~~~~~~~~~~~~ 228 (276)
T d1uwha_ 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-----------RDQIIFMVGRGYLS 228 (276)
T ss_dssp ------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----------HHHHHHHHHHTSCC
T ss_pred cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCCh-----------HHHHHHHHhcCCCC
Confidence 23345679999999999864 3589999999999999999999999853221 12222222222222
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+........++.++.+++.+||+.||++|||++||++.|+
T Consensus 229 p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le 268 (276)
T d1uwha_ 229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268 (276)
T ss_dssp CCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2122233445677889999999999999999999999885
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-48 Score=413.74 Aligned_cols=255 Identities=24% Similarity=0.377 Sum_probs=200.0
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--CceeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH--ARHSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 765 (964)
++|++.+.||+|+||+||+|+. .+|+.||||++..........+.+.+|++++++++|||||++++++.+ .+..|+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 5799999999999999999976 478999999997655555566789999999999999999999999865 4568999
Q ss_pred EEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 766 YEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHEC--RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
|||+++|+|.+++... ....+++..++.++.||++||+|||+.. ..+||||||||+|||++.++.+||+|||+|+.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999999999652 3456999999999999999999999861 12499999999999999999999999999998
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
............||+.|+|||++.+..|+.++|||||||++|||+||+.||.. ....+....+.....+
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~-----------~~~~~~~~~i~~~~~~ 232 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA-----------FSQKELAGKIREGKFR 232 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC-----------SSHHHHHHHHHHTCCC
T ss_pred cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCC-----------CCHHHHHHHHHcCCCC
Confidence 76655555667899999999999999999999999999999999999999852 2233444555444443
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+.. ...+.++.+++.+||+.||++|||++|+++
T Consensus 233 ~~~-----~~~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 233 RIP-----YRYSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp CCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCC-----cccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 221 123456788889999999999999999875
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-48 Score=407.38 Aligned_cols=248 Identities=27% Similarity=0.458 Sum_probs=210.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+++|++.+.||+|+||+||+|+.+ +++.||+|++.... ........+.+|+.++++++|||||++++++.+++..|+|
T Consensus 5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEE
Confidence 468999999999999999999765 68899999986432 2233456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.... .+++..+..++.||++||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 85 mEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~ 159 (263)
T d2j4za1 85 LEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 159 (263)
T ss_dssp EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred EeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCCC
Confidence 99999999999997654 489999999999999999999999 9999999999999999999999999999765533
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+.......+
T Consensus 160 --~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-----------~~~~~~~~~i~~~~~~~p-- 224 (263)
T d2j4za1 160 --RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-----------NTYQETYKRISRVEFTFP-- 224 (263)
T ss_dssp --CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHTTCCCCC--
T ss_pred --cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCC-----------CCHHHHHHHHHcCCCCCC--
Confidence 23456799999999999999999999999999999999999999852 233445555544443322
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.++.+++.+||++||++|||++|+++
T Consensus 225 ----~~~s~~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 225 ----DFVTEGARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----ccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence 123456778889999999999999999986
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-48 Score=411.51 Aligned_cols=252 Identities=22% Similarity=0.365 Sum_probs=200.1
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|+||+||+|++++++.||||++... ....++|.+|+.++++++|||||+++|+|.+++..++||||
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~---~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~ 81 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG---AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 81 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS---SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC---cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence 468889999999999999999988889999998753 23346799999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||++++++.+||+|||+|+........
T Consensus 82 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 157 (263)
T d1sm2a_ 82 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157 (263)
T ss_dssp CTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred cCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCce
Confidence 99999999987543 4588999999999999999999999 9999999999999999999999999999876554332
Q ss_pred -ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 849 -WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 849 -~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....||+.|+|||++.+..++.++|||||||++|||+|++.|+. ......+....+.....+..
T Consensus 158 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~----------~~~~~~~~~~~i~~~~~~~~---- 223 (263)
T d1sm2a_ 158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY----------ENRSNSEVVEDISTGFRLYK---- 223 (263)
T ss_dssp -------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTT----------CSCCHHHHHHHHHHTCCCCC----
T ss_pred eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCC----------CCCCHHHHHHHHHhcCCCCC----
Confidence 234578999999999999999999999999999999999655532 12223344444433322211
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+..++.++.+++.+||+.||++|||++||++.|+
T Consensus 224 -p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~ 257 (263)
T d1sm2a_ 224 -PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 257 (263)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -ccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 1223456889999999999999999999999986
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-48 Score=413.10 Aligned_cols=252 Identities=22% Similarity=0.407 Sum_probs=209.7
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|++.+.||+|+||+||+|++++++.||||+++... ...+.|.+|+.++++++|||||+++|++.+ +..++||||
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey 88 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc---CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEe
Confidence 5789999999999999999999888899999986432 334679999999999999999999998865 567999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC-
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS- 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~- 847 (964)
+++|+|.+++.......+++..+.+++.||++||+|||++ +|+||||||+||++++++.+||+|||+|+.......
T Consensus 89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~ 165 (272)
T d1qpca_ 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (272)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCccc
Confidence 9999999998766656699999999999999999999999 999999999999999999999999999987765432
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......||+.|+|||++.+..++.++|||||||++|||+||+.|+. ......+....+.....++.
T Consensus 166 ~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~----------~~~~~~~~~~~i~~~~~~~~---- 231 (272)
T d1qpca_ 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY----------PGMTNPEVIQNLERGYRMVR---- 231 (272)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSS----------TTCCHHHHHHHHHTTCCCCC----
T ss_pred cccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCC----------CCCCHHHHHHHHHhcCCCCC----
Confidence 2334578999999999999999999999999999999999766643 12223344444433322211
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...++.++.+++.+||+.||++|||+++|++.|+
T Consensus 232 -p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~ 265 (272)
T d1qpca_ 232 -PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (272)
T ss_dssp -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence 1234456888999999999999999999999875
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-47 Score=407.55 Aligned_cols=249 Identities=25% Similarity=0.422 Sum_probs=210.3
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+.++++++|||||++++++.+++..|+|||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE 97 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEeccc--ChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEE
Confidence 3699999999999999999975 479999999987432 2335678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|++||+|.+++... .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.......
T Consensus 98 y~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~ 171 (293)
T d1yhwa1 98 YLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (293)
T ss_dssp CCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred ecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeeccccc
Confidence 99999999988653 489999999999999999999999 999999999999999999999999999998776655
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......||+.|+|||++.+..++.++||||+||++|||+||+.||.. ....+....+.....+...
T Consensus 172 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~-----------~~~~~~~~~~~~~~~~~~~--- 237 (293)
T d1yhwa1 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-----------ENPLRALYLIATNGTPELQ--- 237 (293)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTT-----------SCHHHHHHHHHHHCSCCCS---
T ss_pred cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCC-----------CCHHHHHHHHHhCCCCCCC---
Confidence 56677899999999999999999999999999999999999999852 2222333333333222111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||++||++|||++|+++
T Consensus 238 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp SGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11234456788899999999999999999874
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-48 Score=407.99 Aligned_cols=252 Identities=25% Similarity=0.351 Sum_probs=203.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|+.+ +|+.||||++..... ....+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivm 82 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 82 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEE
Confidence 367999999999999999999764 789999999865322 223457899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ..+++..+..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 83 Ey~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~ 157 (271)
T d1nvra_ 83 EYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 157 (271)
T ss_dssp ECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred eccCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence 999999999999643 4589999999999999999999999 99999999999999999999999999998765432
Q ss_pred --CCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 847 --SNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 847 --~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
......+||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ................
T Consensus 158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~----------~~~~~~~~~~~~~~~~ 227 (271)
T d1nvra_ 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD----------SCQEYSDWKEKKTYLN 227 (271)
T ss_dssp EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSST----------TSHHHHHHHTTCTTST
T ss_pred ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCCh----------HHHHHHHHhcCCCCCC
Confidence 22345689999999999988876 5789999999999999999999863221 1111122222221111
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ......++.+++.+||+.||++|||++|+++
T Consensus 228 ~----~~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 228 P----WKKIDSAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp T----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 1223355678889999999999999999875
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.8e-48 Score=413.81 Aligned_cols=253 Identities=26% Similarity=0.445 Sum_probs=197.3
Q ss_pred hcccccceeecCCceeEEEEEeC-CCC---eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|+..+.||+|+||+||+|+++ +++ .||||++.... .....+.|.+|+.++++++|||||+++|++.+++..++
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~i 104 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI 104 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45777889999999999999775 333 58888876432 34455789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|||||++|+|.+++.... ..+++.++..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 105 v~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~ 180 (299)
T d1jpaa_ 105 ITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 180 (299)
T ss_dssp EEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceEccC
Confidence 999999999999987543 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC-----ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 845 DSSN-----WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 845 ~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
.... .....||+.|+|||.+.++.++.++|||||||++|||+| |+.||.. ....+....+...
T Consensus 181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~-----------~~~~~~~~~i~~~ 249 (299)
T d1jpaa_ 181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD-----------MTNQDVINAIEQD 249 (299)
T ss_dssp ---------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-----------CCHHHHHHHHHTT
T ss_pred CCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHcC
Confidence 4322 122457899999999999999999999999999999998 8999753 2223444444333
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..++. ..+++..+.+++.+||+.||++|||++||++.|+
T Consensus 250 ~~~~~-----~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~ 288 (299)
T d1jpaa_ 250 YRLPP-----PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288 (299)
T ss_dssp CCCCC-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCC-----CccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 22221 1234566888999999999999999999998875
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.7e-48 Score=412.18 Aligned_cols=254 Identities=24% Similarity=0.393 Sum_probs=211.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|+++ +++.||||+++.. ....++|.+|+.++++++|||||+++++|.+++..++||
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~ 92 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 92 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT---CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc---cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEe
Confidence 457899999999999999999775 5888999998643 233567999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.......+++..+..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~ 169 (287)
T d1opja_ 93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 169 (287)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence 999999999999877777799999999999999999999999 99999999999999999999999999998765543
Q ss_pred CC-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SN-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.. .....|++.|+|||++.+..|+.++|||||||++|||++|+.|+.. .....+..+. +.....++.
T Consensus 170 ~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~----------~~~~~~~~~~-i~~~~~~~~- 237 (287)
T d1opja_ 170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----------GIDLSQVYEL-LEKDYRMER- 237 (287)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSST----------TCCHHHHHHH-HHTTCCCCC-
T ss_pred ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC----------cchHHHHHHH-HhcCCCCCC-
Confidence 32 2344578999999999999999999999999999999998777531 2222232222 222222221
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...++.++.+++.+||+.||++|||++||++.|+
T Consensus 238 ---~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~ 271 (287)
T d1opja_ 238 ---PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271 (287)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1234456888999999999999999999998875
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-47 Score=398.78 Aligned_cols=251 Identities=23% Similarity=0.407 Sum_probs=211.8
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|+||+||+|++++++.||||+++... ...++|.+|+.++++++||||++++|+|.+++..++||||
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~---~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey 80 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 80 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS---SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEEC
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc---CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEc
Confidence 4789999999999999999999888899999997532 2346899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC-
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS- 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~- 847 (964)
+++|+|.+++.... ..+++..+.+++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~ 156 (258)
T d1k2pa_ 81 MANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 156 (258)
T ss_dssp CTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC
T ss_pred cCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCce
Confidence 99999999976544 3488999999999999999999999 999999999999999999999999999987655433
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......||+.|+|||.+.+..++.++|||||||++|||+| |+.||.. ....+....+.....++.
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~-----------~~~~~~~~~i~~~~~~~~--- 222 (258)
T d1k2pa_ 157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER-----------FTNSETAEHIAQGLRLYR--- 222 (258)
T ss_dssp CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-----------SCHHHHHHHHHTTCCCCC---
T ss_pred eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCC-----------CCHHHHHHHHHhCCCCCC---
Confidence 2334578999999999999999999999999999999998 7889753 223344444443322211
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+..++.++.+++.+||+.||++|||++++++.|.
T Consensus 223 --p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 256 (258)
T d1k2pa_ 223 --PHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256 (258)
T ss_dssp --CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred --cccccHHHHHHHHHHccCCHhHCcCHHHHHHHhh
Confidence 1233456889999999999999999999999874
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-47 Score=407.66 Aligned_cols=251 Identities=21% Similarity=0.329 Sum_probs=207.5
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
+.|++.+.||+|+||+||+|+.+ +|+.||||++... .....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmE 89 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 89 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--SSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEe
Confidence 35899999999999999999764 7899999998753 23344678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 90 y~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~ 165 (288)
T d2jfla1 90 FCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 165 (288)
T ss_dssp CCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH
T ss_pred cCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCCcc
Confidence 999999999986543 3489999999999999999999999 999999999999999999999999999976543333
Q ss_pred Cccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 848 NWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
......||+.|+|||++. +..|+.++||||+||++|||+||+.||... ...+....+.....+.
T Consensus 166 ~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~-----------~~~~~~~~i~~~~~~~ 234 (288)
T d2jfla1 166 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-----------NPMRVLLKIAKSEPPT 234 (288)
T ss_dssp HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTS-----------CGGGHHHHHHHSCCCC
T ss_pred cccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCC-----------CHHHHHHHHHcCCCCC
Confidence 334568999999999984 456899999999999999999999998532 2223444444443322
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. .....+.++.+++.+||++||++|||++|+++
T Consensus 235 ~~---~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 235 LA---QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp CS---SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CC---ccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 11234456788899999999999999999976
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-47 Score=402.63 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=206.1
Q ss_pred hcccccce-eecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFC-IGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~-lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|...+. ||+|+||+||+|.++ ++..||||+++.. ......++|.+|++++++++|||||+++|++.+ +..|+
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l 85 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 85 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh-cCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence 45666664 999999999999764 3457999999753 344556789999999999999999999999975 46899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+|+....
T Consensus 86 vmE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~ 161 (285)
T d1u59a_ 86 VMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 161 (285)
T ss_dssp EEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhcccc
Confidence 999999999999985433 4589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 DSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.... .....||+.|+|||++.++.++.++|||||||++|||+| |+.||.... ..+....+..+..
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~-----------~~~~~~~i~~~~~ 230 (285)
T d1u59a_ 162 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----------GPEVMAFIEQGKR 230 (285)
T ss_dssp CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------THHHHHHHHTTCC
T ss_pred cccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHcCCC
Confidence 4322 234468899999999999999999999999999999998 899985322 2233344433322
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
++. +..++.++.+++.+||+.||++|||+.+|++.|+
T Consensus 231 ~~~-----p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~ 267 (285)
T d1u59a_ 231 MEC-----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267 (285)
T ss_dssp CCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-----CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 211 1234566889999999999999999999999885
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-47 Score=401.54 Aligned_cols=246 Identities=27% Similarity=0.384 Sum_probs=199.4
Q ss_pred ceeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||+||+|.++ .++.||||+++.........++|.+|+.++++++|||||+++|+|.. +..++||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 46999999999999764 34679999997655555556789999999999999999999999965 457899999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCc--
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNW-- 849 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-- 849 (964)
|+|.+++... ..+++..+..++.||+.||+|||++ +||||||||+||+++.++.+|++|||+|+.........
T Consensus 92 g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 166 (277)
T d1xbba_ 92 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166 (277)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhcccccccccc
Confidence 9999999754 3489999999999999999999999 99999999999999999999999999998765543322
Q ss_pred -cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 850 -SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 850 -~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
....||+.|+|||.+.+..++.++|||||||++|||+| |+.||.. ....+....+..+..++.
T Consensus 167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~-----------~~~~~~~~~i~~~~~~~~---- 231 (277)
T d1xbba_ 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----------MKGSEVTAMLEKGERMGC---- 231 (277)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT-----------CCHHHHHHHHHTTCCCCC----
T ss_pred ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCC-----------CCHHHHHHHHHcCCCCCC----
Confidence 23568999999999999999999999999999999998 8999753 222333333333222211
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+..++.++.+++.+||+.||++|||+++|++.|+
T Consensus 232 -p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~ 265 (277)
T d1xbba_ 232 -PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265 (277)
T ss_dssp -CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred -CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence 1234566888999999999999999999998875
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-46 Score=400.75 Aligned_cols=254 Identities=26% Similarity=0.433 Sum_probs=201.4
Q ss_pred hcccccceeecCCceeEEEEEeCCC-----CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSG-----DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
+.|++.+.||+|+||+||+|.++.. ..||||++.... ......+|.+|+.++++++|||||+++|++.+.+..+
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~ 85 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 85 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc-ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence 4688899999999999999976532 369999986433 3444567999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+.+|++.+++.... ..+++.++..++.||+.|++|||++ +|+||||||+|||++.++.+||+|||+|+...
T Consensus 86 ~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~ 161 (283)
T d1mqba_ 86 IITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 161 (283)
T ss_dssp EEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhccc
Confidence 9999999999999886543 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.|+.. .....+....+..+..
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~----------~~~~~~~~~~i~~~~~ 231 (283)
T d1mqba_ 162 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYW----------ELSNHEVMKAINDGFR 231 (283)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTT----------TCCHHHHHHHHHTTCC
T ss_pred CCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccc----------cCCHHHHHHHHhccCC
Confidence 43322 2334689999999999999999999999999999999997766431 2223344444433322
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
++. ..+++..+.+++.+||+.||++||||+||++.|+
T Consensus 232 ~~~-----~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~ 268 (283)
T d1mqba_ 232 LPT-----PMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 268 (283)
T ss_dssp CCC-----CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCC-----chhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHH
Confidence 221 1234466889999999999999999999999885
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-46 Score=392.82 Aligned_cols=247 Identities=24% Similarity=0.386 Sum_probs=201.1
Q ss_pred ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec----CceeEEE
Q 037111 691 FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH----ARHSFLV 765 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv 765 (964)
|+..+.||+|+||+||+|+.+ +++.||+|++..........+.+.+|++++++++|||||++++++.+ ....|+|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 355668999999999999764 68899999997655555566789999999999999999999999865 3568999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEEC-CCCceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLD-FEYEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~-~~~~~kl~Dfg~a~~~ 842 (964)
|||+++|+|.+++.... .+++..+..++.||++||+|||++ + |+||||||+|||++ +++.+||+|||+|+..
T Consensus 91 mE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~---~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~ 165 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 165 (270)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHC---CCCEEeCCcChhhceeeCCCCCEEEeecCcceec
Confidence 99999999999997653 488999999999999999999998 6 99999999999996 5789999999999864
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||... ....+....+.....++
T Consensus 166 ~~~--~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~----------~~~~~~~~~i~~~~~~~ 232 (270)
T d1t4ha_ 166 RAS--FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC----------QNAAQIYRRVTSGVKPA 232 (270)
T ss_dssp CTT--SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC----------SSHHHHHHHHTTTCCCG
T ss_pred cCC--ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCc----------ccHHHHHHHHHcCCCCc
Confidence 432 3346689999999998865 6999999999999999999999998521 12223334443333322
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. . .....++.+++.+||++||++|||++|+++
T Consensus 233 ~~-~---~~~~~~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 233 SF-D---KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp GG-G---GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cc-C---ccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence 21 1 123345778889999999999999999986
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-47 Score=402.89 Aligned_cols=248 Identities=21% Similarity=0.336 Sum_probs=206.6
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||+||+|+. .+|+.||||++.... ......+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 4799999999999999999976 478999999986432 22334567999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++||+|.+++...+ .+++..+..++.|++.||+|||++ +||||||||+||++++++.+||+|||+|+......
T Consensus 88 Ey~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~ 162 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162 (288)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccCC
Confidence 9999999999987654 489999999999999999999999 99999999999999999999999999998775432
Q ss_pred --CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 847 --SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 847 --~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+.......+
T Consensus 163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~-----------~~~~~~~~~i~~~~~~~p- 230 (288)
T d1uu3a_ 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-----------GNEYLIFQKIIKLEYDFP- 230 (288)
T ss_dssp -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHTTCCCCC-
T ss_pred cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCC-----------cCHHHHHHHHHcCCCCCC-
Confidence 223456799999999999999999999999999999999999999852 223344555555443322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVC 958 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl 958 (964)
.....++.+++.+||.+||++|||++|++
T Consensus 231 -----~~~s~~~~~li~~~L~~dP~~R~t~~e~~ 259 (288)
T d1uu3a_ 231 -----EKFFPKARDLVEKLLVLDATKRLGCEEME 259 (288)
T ss_dssp -----TTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred -----ccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence 12334577889999999999999999863
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-47 Score=401.66 Aligned_cols=254 Identities=26% Similarity=0.436 Sum_probs=205.8
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|++.+.||+|+||+||+|+++++++||||+++... ...+.|.+|+.++++++|||||+++|++.+ +..++|||
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~E 91 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 91 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc---CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEE
Confidence 36799999999999999999999888899999986432 234679999999999999999999999965 56799999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS- 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 846 (964)
|+++|+|.+++.......+++.+++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 92 y~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~ 168 (285)
T d1fmka3 92 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 168 (285)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred ecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCCc
Confidence 99999999999876656699999999999999999999999 99999999999999999999999999998765443
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.......||+.|+|||++.++.++.++|||||||++|||+||+.|+. ......+....+.....++ .
T Consensus 169 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~----------~~~~~~~~~~~i~~~~~~~-~-- 235 (285)
T d1fmka3 169 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY----------PGMVNREVLDQVERGYRMP-C-- 235 (285)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS----------TTCCHHHHHHHHHTTCCCC-C--
T ss_pred eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCC----------CCCCHHHHHHHHHhcCCCC-C--
Confidence 22334678999999999999999999999999999999999777653 2233334444443332211 1
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
...++.++.+++.+||+.||++||++++|+++|+.
T Consensus 236 --~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 270 (285)
T d1fmka3 236 --PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 270 (285)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred --CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhh
Confidence 12344568889999999999999999999998863
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-46 Score=407.88 Aligned_cols=260 Identities=23% Similarity=0.336 Sum_probs=205.3
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|+. .+|+.||+|+++.. ........+.+|+.++++++|||||+++++|.++++.|+||
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm 83 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 83 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECC-CCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChh-hCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 36899999999999999999976 47889999998753 23444578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
||++||+|.+++.+.. .+++..+..++.|++.||+|||+ + +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 84 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 158 (322)
T d1s9ja_ 84 EHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158 (322)
T ss_dssp ECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeECCCCCEEEeeCCCccccCCC
Confidence 9999999999997654 48999999999999999999997 5 8999999999999999999999999999865432
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------------------------
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD------------------------- 900 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~------------------------- 900 (964)
. ....+||+.|+|||++.+..|+.++||||+||++|||++|+.||........
T Consensus 159 ~--~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (322)
T d1s9ja_ 159 M--ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236 (322)
T ss_dssp T--C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------
T ss_pred c--cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccc
Confidence 2 2356899999999999999999999999999999999999999964322100
Q ss_pred ------CCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 901 ------SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 901 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.....+..........+ .... .....++.+++.+||..||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 237 LSSYGMDSRPPMAIFELLDYIVNEPPP-KLPS---GVFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp ---------CCCCHHHHHHHHHTSCCC-CCCB---TTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccchhHHHHHhhhhccCCc-cCcc---ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 000000111111111111111 1000 112345778889999999999999999975
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-46 Score=410.34 Aligned_cols=255 Identities=24% Similarity=0.410 Sum_probs=205.8
Q ss_pred hcccccceeecCCceeEEEEEeCC-C-----CeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCce
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS-G-----DTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 761 (964)
++|++.+.||+|+||+||+|++.. + ..||||++.... .......+.+|+.+++++ +|||||++++++.+.+.
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~ 115 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 115 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc-CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence 579999999999999999997642 2 268999986532 333446789999999988 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 037111 762 SFLVYEYLERGSLARILSSETA---------------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSS 820 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp 820 (964)
.++||||+++|+|.+++..... ..+++..++.++.||++||+|||++ +||||||||
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp 192 (325)
T d1rjba_ 116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA 192 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCch
Confidence 9999999999999999975432 3488999999999999999999999 999999999
Q ss_pred CCeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccc
Q 037111 821 KNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSS 897 (964)
Q Consensus 821 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~ 897 (964)
+||+++.++.+||+|||+|+........ .....||+.|||||++.++.++.++|||||||++|||+| |+.||....
T Consensus 193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~- 271 (325)
T d1rjba_ 193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP- 271 (325)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-
T ss_pred hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC-
Confidence 9999999999999999999876554432 234568999999999999999999999999999999998 899975322
Q ss_pred ccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 898 LSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+.+.+++.....++. +..++.++.+++.+||+.||++|||++||++.|.
T Consensus 272 ----------~~~~~~~~~~~~~~~~~----p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 272 ----------VDANFYKLIQNGFKMDQ----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp ----------CSHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----------HHHHHHHHHhcCCCCCC----CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 12233333333322221 1233456888999999999999999999999985
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.9e-46 Score=402.72 Aligned_cols=251 Identities=25% Similarity=0.329 Sum_probs=193.3
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
+.|++.+.||+|+||+||+|+.+ +|+.||||++...... .....+.+|+.++++++|||||++++++.+++..|+|||
T Consensus 9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE 87 (307)
T d1a06a_ 9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ 87 (307)
T ss_dssp GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 56999999999999999999765 6899999998754322 234568899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC---CCCceEEeccCcccccCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD---FEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~a~~~~~ 844 (964)
|++||+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||++. +++.+||+|||+|+....
T Consensus 88 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~ 162 (307)
T d1a06a_ 88 LVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 162 (307)
T ss_dssp CCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred ccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence 99999999999654 4599999999999999999999999 999999999999995 578999999999986654
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. ......||+.|+|||++.+..|+.++||||+||++|||++|+.||.. ....+....+.......+.
T Consensus 163 ~~-~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~-----------~~~~~~~~~i~~~~~~~~~ 230 (307)
T d1a06a_ 163 GS-VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD-----------ENDAKLFEQILKAEYEFDS 230 (307)
T ss_dssp -----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC-----------SSHHHHHHHHHTTCCCCCT
T ss_pred CC-eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCC-----------CCHHHHHHHHhccCCCCCC
Confidence 32 23456799999999999999999999999999999999999999852 2233444555444433221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.++.+++.+||++||++|||++|+++
T Consensus 231 --~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 231 --PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp --TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --ccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 112234456788899999999999999999987
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.7e-46 Score=401.10 Aligned_cols=246 Identities=25% Similarity=0.408 Sum_probs=204.5
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.|+..+.||+|+||+||+|+. .+|+.||||++..... .....+.+.+|+.++++++|||||++++++.+++..|+|||
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E 95 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence 589999999999999999975 4788999999875432 33445679999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||++|++..++... .++++..+..++.||++||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 96 ~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~-- 168 (309)
T d1u5ra_ 96 YCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (309)
T ss_dssp CCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCCC--
Confidence 99999998776543 3589999999999999999999999 9999999999999999999999999999865433
Q ss_pred Ccccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 848 NWSELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
....||+.|||||++.+ +.|+.++|||||||++|||++|+.||.. ....+.+..+.....+...
T Consensus 169 --~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~-----------~~~~~~~~~i~~~~~~~~~ 235 (309)
T d1u5ra_ 169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN-----------MNAMSALYHIAQNESPALQ 235 (309)
T ss_dssp --CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTT-----------SCHHHHHHHHHHSCCCCCS
T ss_pred --CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCC-----------CCHHHHHHHHHhCCCCCCC
Confidence 34579999999999864 4589999999999999999999999752 2223444444444333221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ...+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~----~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 236 S----GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp C----TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C----CCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 1 123456788889999999999999999875
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-45 Score=400.50 Aligned_cols=250 Identities=22% Similarity=0.291 Sum_probs=213.3
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+. .+|+.||||++.+.. ......+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 57899999999999999999976 579999999997532 1233457788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||++||+|.+++.... .+++..++.++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.....
T Consensus 84 ~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~ 158 (337)
T d1o6la_ 84 MEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred eeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccC
Confidence 99999999999997654 488999999999999999999999 9999999999999999999999999999877665
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.. ....+....+.......+
T Consensus 159 ~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~-----------~~~~~~~~~i~~~~~~~p-- 225 (337)
T d1o6la_ 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-----------QDHERLFELILMEEIRFP-- 225 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC--
T ss_pred CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCC-----------cCHHHHHHHHhcCCCCCC--
Confidence 5556677899999999999999999999999999999999999999752 233455555555554432
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPN-----MQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl~ 959 (964)
.....++.+++.+||.+||++||+ ++|+++
T Consensus 226 ----~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 226 ----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----ccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence 123345678888999999999995 777764
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-45 Score=394.88 Aligned_cols=252 Identities=18% Similarity=0.291 Sum_probs=211.1
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC----chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG----ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|++.+.||+|+||+||+|+. .+|+.||||++..... .....+.+.+|+.++++++|||||++++++.+++..|
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 5699999999999999999976 4789999999865322 2234578999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC----ceEEeccCcc
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY----EAHVSDFGTA 839 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~a 839 (964)
+|||||++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++ .+|++|||+|
T Consensus 90 iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a 164 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164 (293)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhh
Confidence 9999999999999997654 489999999999999999999999 999999999999998876 4999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+....
T Consensus 165 ~~~~~~~-~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~-----------~~~~~~~~~i~~~~ 232 (293)
T d1jksa_ 165 HKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-----------DTKQETLANVSAVN 232 (293)
T ss_dssp EECTTSC-BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHTTC
T ss_pred hhcCCCc-cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCC-----------CCHHHHHHHHHhcC
Confidence 8765433 23456789999999999999999999999999999999999999752 23344555554444
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+ .......+..+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~--~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 233 YEFE--DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp CCCC--HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCC--chhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 3322 1112234456788999999999999999999986
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.6e-45 Score=403.82 Aligned_cols=252 Identities=21% Similarity=0.333 Sum_probs=211.6
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 102 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 102 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEccc--chhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46899999999999999999976 47899999998643 3344577899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC--CCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF--EYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~ 844 (964)
|||+||+|.+++.... ..+++..+..++.||+.||+|||++ +||||||||+|||++. ++.+||+|||+|+....
T Consensus 103 E~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~ 178 (350)
T d1koaa2 103 EFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 178 (350)
T ss_dssp CCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT
T ss_pred EcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheeccc
Confidence 9999999999996443 3489999999999999999999999 9999999999999964 57899999999987654
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. ......||+.|||||++.+..++.++||||+||++|||++|+.||.. ....+....+.......+.
T Consensus 179 ~~-~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-----------~~~~~~~~~i~~~~~~~~~ 246 (350)
T d1koaa2 179 KQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG-----------ENDDETLRNVKSCDWNMDD 246 (350)
T ss_dssp TS-CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCSCC
T ss_pred cc-ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCCc
Confidence 43 33456899999999999999999999999999999999999999752 2334555555544433221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........++.+++.+||.+||++|||++|+++
T Consensus 247 --~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 279 (350)
T d1koaa2 247 --SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 279 (350)
T ss_dssp --GGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred --ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112234456788899999999999999999987
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=3.4e-45 Score=401.56 Aligned_cols=252 Identities=19% Similarity=0.276 Sum_probs=211.0
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.+.|++.+.||+|+||+||+|+. .+|+.||||++... .......+.+|+.++++++|||||+++++|.+++..|+||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 105 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 105 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCc--chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 35799999999999999999976 47999999998743 2334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC--CCCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD--FEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg~a~~~~~ 844 (964)
||++||+|.+++... ..++++.+++.++.||+.||+|||++ +||||||||+|||++ .++.+||+|||+|+....
T Consensus 106 E~~~gg~L~~~~~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~ 181 (352)
T d1koba_ 106 EFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 181 (352)
T ss_dssp ECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred EcCCCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCC
Confidence 999999999988543 34589999999999999999999999 999999999999998 578999999999988765
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. ......||+.|+|||++.+..++.++||||+||++|||+||+.||.. ....+....+.......+.
T Consensus 182 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~-----------~~~~~~~~~i~~~~~~~~~ 249 (352)
T d1koba_ 182 DE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG-----------EDDLETLQNVKRCDWEFDE 249 (352)
T ss_dssp TS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC-----------SSHHHHHHHHHHCCCCCCS
T ss_pred CC-ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCCc
Confidence 43 33456799999999999999999999999999999999999999752 2333445555444333221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.++.+++.+||.+||++|||++|+++
T Consensus 250 --~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 250 --DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp --STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred --ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112234456788899999999999999999986
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-46 Score=389.74 Aligned_cols=248 Identities=26% Similarity=0.395 Sum_probs=198.0
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-CceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-ARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+++ |++||||+++.. ...+.+.+|++++++++||||++++|+|.+ .+..++||
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ 80 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 80 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred HHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEE
Confidence 457889999999999999999985 789999998642 234678999999999999999999999855 46689999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.......+++..+++++.||+.|++|||+. +|+||||||+||+++.++.+|++|||+++.....
T Consensus 81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~- 156 (262)
T d1byga_ 81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 156 (262)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCC-
Confidence 999999999999776555689999999999999999999999 9999999999999999999999999999865433
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....+++.|+|||++.+..++.++||||||+++|||+| |+.||.. ....+....+.....+ +.
T Consensus 157 --~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~-----------~~~~~~~~~i~~~~~~-~~- 221 (262)
T d1byga_ 157 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR-----------IPLKDVVPRVEKGYKM-DA- 221 (262)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT-----------SCGGGHHHHHTTTCCC-CC-
T ss_pred --CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCC-----------CCHHHHHHHHHcCCCC-CC-
Confidence 234467899999999999999999999999999999998 6777542 2222333333322222 11
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+.++.+++.+||+.||++||||.++++.|+
T Consensus 222 ---~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~ 255 (262)
T d1byga_ 222 ---PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 255 (262)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 1223456788999999999999999999999985
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-45 Score=398.60 Aligned_cols=256 Identities=24% Similarity=0.408 Sum_probs=212.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
..++|+..+.||+|+||+||+|+++ +++.||||+++.. ......++|.+|+.++++++||||++++++|.+.+
T Consensus 11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~ 89 (301)
T d1lufa_ 11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 89 (301)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChh-cChHHHHHHHHHHHHHHhcCCCCcccceeeeccCC
Confidence 3568999999999999999999764 3568999998753 33445678999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccC
Q 037111 761 HSFLVYEYLERGSLARILSSET----------------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDV 818 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dl 818 (964)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +||||||
T Consensus 90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDl 166 (301)
T d1lufa_ 90 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 166 (301)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEE
Confidence 9999999999999999996422 23478899999999999999999999 9999999
Q ss_pred CCCCeEECCCCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCC-CCCCcc
Q 037111 819 SSKNVLLDFEYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ-HPKDLL 895 (964)
Q Consensus 819 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~-~p~~~~ 895 (964)
||+||+++.++.+||+|||+|+....... ......|++.|+|||.+.+..++.++|||||||++|||++|. .||.
T Consensus 167 Kp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~-- 244 (301)
T d1lufa_ 167 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY-- 244 (301)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT--
T ss_pred cccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCC--
Confidence 99999999999999999999986654332 223456889999999999999999999999999999999986 4553
Q ss_pred ccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 896 SSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+....+....+..+..++. ...++.++.+++.+||+.||++||||.||+++|+
T Consensus 245 ---------~~~~~e~~~~v~~~~~~~~-----p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~ 297 (301)
T d1lufa_ 245 ---------GMAHEEVIYYVRDGNILAC-----PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297 (301)
T ss_dssp ---------TSCHHHHHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---------CCCHHHHHHHHHcCCCCCC-----CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 2333455555555544322 1234456889999999999999999999999986
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-44 Score=391.65 Aligned_cols=247 Identities=25% Similarity=0.349 Sum_probs=209.0
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||+||+|+. .+|+.||||+++... ......+.+.+|+.++++++|||||++++++.+++..|+|
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence 46899999999999999999976 469999999986432 2233457789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||++||+|..++.... .+++..+..++.||+.|++|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 83 mE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~ 157 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 157 (316)
T ss_dssp ECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred eeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEeccc
Confidence 99999999999986554 378888999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....||+.|+|||++.+..|+.++||||+||++|||+||+.||.. ....+....+.......+
T Consensus 158 ---~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~-----------~~~~~~~~~i~~~~~~~p-- 221 (316)
T d1fota_ 158 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD-----------SNTMKTYEKILNAELRFP-- 221 (316)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHHCCCCCC--
T ss_pred ---cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCC-----------cCHHHHHHHHHcCCCCCC--
Confidence 2356899999999999999999999999999999999999999852 233455555555444322
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
...+.++.+++.+||.+||++|| |++++++
T Consensus 222 ----~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 222 ----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp ----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ----CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence 12234577888899999999996 8888864
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-45 Score=387.75 Aligned_cols=253 Identities=23% Similarity=0.375 Sum_probs=196.7
Q ss_pred hhcccccceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|+..+.||+|+||+||+|++.. +..||||+++.. ......+.+.+|+.++++++|||||+++|++. ++..+
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 83 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 83 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEE
Confidence 3579999999999999999997642 346888888643 34445678999999999999999999999996 46789
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|++.+++.... ..+++..++.++.||++||+|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 84 iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~ 159 (273)
T d1mp8a_ 84 IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159 (273)
T ss_dssp EEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheecc
Confidence 9999999999999886543 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 844 PDSS-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 844 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ......||+.|+|||.+.+..++.++|||||||++|||+| |..||.... ..+....+.....+
T Consensus 160 ~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~-----------~~~~~~~i~~~~~~ 228 (273)
T d1mp8a_ 160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----------NNDVIGRIENGERL 228 (273)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------GGGHHHHHHTTCCC
T ss_pred CCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCC-----------HHHHHHHHHcCCCC
Confidence 4432 2334568999999999999999999999999999999998 888875322 22334444333322
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+. ...++..+.+++.+||+.||++|||++||++.|+
T Consensus 229 ~~-----~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~ 264 (273)
T d1mp8a_ 229 PM-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 264 (273)
T ss_dssp CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-----CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 21 1234466888999999999999999999998875
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-45 Score=388.48 Aligned_cols=254 Identities=25% Similarity=0.393 Sum_probs=199.9
Q ss_pred hcccccceeecCCceeEEEEEeC--CCC--eEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP--SGD--TVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|++.+.||+|+||+||+|++. +++ .||||+++.... .....+.|.+|+.++++++||||++++|++.+ ...+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 56999999999999999999753 233 689999865432 34445789999999999999999999999976 4678
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|++.+++..... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 87 lv~e~~~~~~l~~~~~~~~~-~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 162 (273)
T ss_dssp EEEECCTTCBHHHHHHHHGG-GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeeeecCcchhhhhhcccC-CCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhcc
Confidence 99999999999998876543 489999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... .....|++.|+|||.+.+..++.++|||||||++|||+| |+.||. +....+....+....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~-----------~~~~~~~~~~i~~~~ 231 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-----------GLNGSQILHKIDKEG 231 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTT-----------TCCHHHHHHHHHTSC
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCC-----------CcCHHHHHHHHHhCC
Confidence 54332 223457889999999999999999999999999999998 899974 334445555555444
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..++. ....+..+.+++.+||+.||++||||++|++.|+
T Consensus 232 ~~~~~----~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~ 270 (273)
T d1u46a_ 232 ERLPR----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270 (273)
T ss_dssp CCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC----cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 33322 1233456888999999999999999999999985
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3e-44 Score=380.88 Aligned_cols=252 Identities=21% Similarity=0.348 Sum_probs=208.5
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCc-------hhhHHHHHHHHHHHhCCC-CCceeeEEeeeecC
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGE-------TTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHA 759 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 759 (964)
++|+..+.||+|+||+||+|+. .+|+.||||++...... ....+.+.+|+.++++++ ||||+++++++.++
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 5799999999999999999976 47889999998754322 122346889999999997 99999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
+..|+||||+++|+|.+++.... .+++.+++.++.||++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a 157 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS 157 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchhe
Confidence 99999999999999999997654 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccccccc------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
+...... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.. ........
T Consensus 158 ~~~~~~~-~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~-----------~~~~~~~~ 225 (277)
T d1phka_ 158 CQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-----------RKQMLMLR 225 (277)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHH
T ss_pred eEccCCC-ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCC-----------CCHHHHHH
Confidence 8776543 3345689999999999863 3468899999999999999999999852 22334444
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+.......+. ......+.++.+++.+||++||++|||++||++
T Consensus 226 ~i~~~~~~~~~--~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 226 MIMSGNYQFGS--PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp HHHHTCCCCCT--TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHhCCCCCCC--cccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 45544433211 112344566888999999999999999999875
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4e-44 Score=393.05 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=210.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+.+ +|+.||||++.... ......+.+.+|+.+++.++|||||++++++.+....++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 468999999999999999999764 79999999986432 2233456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+.+|+|.+++.... .+++..++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 120 ~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~ 194 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred cccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence 99999999999997654 489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....||+.|||||++.+..++.++||||+||++|||+||+.||.. .........+.......+
T Consensus 195 ---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~-----------~~~~~~~~~i~~~~~~~p-- 258 (350)
T d1rdqe_ 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA-----------DQPIQIYEKIVSGKVRFP-- 258 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC--
T ss_pred ---cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCC-----------cCHHHHHHHHhcCCCCCC--
Confidence 2356799999999999999999999999999999999999999852 233445555555544332
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.....++.+++.+||.+||++|+ |++++++
T Consensus 259 ----~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 259 ----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ----ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 12345577888999999999994 8999875
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.6e-44 Score=383.79 Aligned_cols=256 Identities=25% Similarity=0.355 Sum_probs=202.6
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc----ee
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----HS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~ 762 (964)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... +......+.+|+.++++++|||||++++++...+ ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 5799999999999999999975 5789999999975433 3444567999999999999999999999987653 48
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+||||++||+|.+++.... .+++.+++.++.||++||+|||++ +||||||||+||+++.++..+++|||.+...
T Consensus 87 ~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~ 161 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 161 (277)
T ss_dssp EEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred EEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhh
Confidence 99999999999999986654 489999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCC---CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 843 KPDS---SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 843 ~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
.... .......||+.|+|||++.+..++.++||||+||++|||+||+.||... ...+....+....
T Consensus 162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-----------~~~~~~~~~~~~~ 230 (277)
T d1o6ya_ 162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-----------SPVSVAYQHVRED 230 (277)
T ss_dssp C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----------SHHHHHHHHHHCC
T ss_pred ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCc-----------CHHHHHHHHHhcC
Confidence 4332 2234567999999999999999999999999999999999999998532 2233333433332
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRP-NMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-s~~evl~~L~ 962 (964)
..++ .......+.++.+++.+||++||++|| |++++.+.|.
T Consensus 231 ~~~~--~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~ 272 (277)
T d1o6ya_ 231 PIPP--SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 272 (277)
T ss_dssp CCCG--GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CCCC--chhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence 2221 111223445688889999999999999 8999888764
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-44 Score=391.43 Aligned_cols=252 Identities=23% Similarity=0.377 Sum_probs=199.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCC----eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.+|++.+.||+|+||+||+|.+. +|+ +||||+++.. ......++|.+|+.++++++|||||+++|+|.++ ..+
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~ 86 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 86 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Cee
Confidence 36999999999999999999764 444 5889988643 2334467899999999999999999999999865 567
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+++||+.+|+|.+++.... ..+++..+++++.||+.||+|||++ +||||||||+||+++.++.+||+|||+|+...
T Consensus 87 ~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 162 (317)
T d1xkka_ 87 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 162 (317)
T ss_dssp EEEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTT
T ss_pred EEEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceecc
Confidence 8899999999999887643 4589999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
..... .....||+.|+|||.+.++.++.++|||||||++|||+| |+.||+... ..+....+..+..
T Consensus 163 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~-----------~~~~~~~i~~~~~ 231 (317)
T d1xkka_ 163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----------ASEISSILEKGER 231 (317)
T ss_dssp TTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----------GGGHHHHHHHTCC
T ss_pred cccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC-----------HHHHHHHHHcCCC
Confidence 54332 234468999999999999999999999999999999998 788875321 2222222222222
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
++. ...++..+.+++.+||+.||++|||++||++.|+
T Consensus 232 ~~~-----p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~ 268 (317)
T d1xkka_ 232 LPQ-----PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268 (317)
T ss_dssp CCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-----CcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHH
Confidence 111 1234456888999999999999999999998764
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-44 Score=391.37 Aligned_cols=248 Identities=24% Similarity=0.334 Sum_probs=207.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHH-hCCCCCceeeEEeeeecCceeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKAL-TGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
++|++.+.||+|+||+||+|+.+ +|+.||||++++.. ......+.+..|..++ +.++|||||++++++.+++..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 67999999999999999999765 78999999996432 1223345666777765 468999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 82 mEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~ 156 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 156 (320)
T ss_dssp EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcccc
Confidence 99999999999997654 388999999999999999999999 9999999999999999999999999999877666
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........||+.|+|||++.+..++.++||||+||++|||+||+.||.. ....+....+.......+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~-----------~~~~~~~~~i~~~~~~~p-- 223 (320)
T d1xjda_ 157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-----------QDEEELFHSIRMDNPFYP-- 223 (320)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC--
T ss_pred cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCC-----------CCHHHHHHHHHcCCCCCC--
Confidence 5556667899999999999999999999999999999999999999852 233344444444433222
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQ-IVC 958 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~-evl 958 (964)
...+.++.+++.+||.+||++||++. +++
T Consensus 224 ----~~~s~~~~dli~~~L~~dP~~R~s~~~~l~ 253 (320)
T d1xjda_ 224 ----RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 253 (320)
T ss_dssp ----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ----ccCCHHHHHHHHHhcccCCCCCcCHHHHHH
Confidence 12345578889999999999999985 664
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-44 Score=389.52 Aligned_cols=254 Identities=23% Similarity=0.395 Sum_probs=204.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCC--eEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGD--TVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
.++|++.+.||+|+||+||+|+++ +|. .||||++.... .....+.|.+|+++++++ +|||||+++|+|.+++..+
T Consensus 9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc-ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 468999999999999999999775 343 47788875432 233456799999999998 7999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhc--------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 764 LVYEYLERGSLARILSSE--------------TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
+||||+++|+|.++++.. ....+++..+.+++.||++|+.|+|+. +|+||||||+|||++.++
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~ 164 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 164 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCC
Confidence 999999999999999653 345689999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCC-CCCccccccCCCCCCCCh
Q 037111 830 EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQH-PKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~-p~~~~~~~~~~~~~~~~~ 908 (964)
.+||+|||+|+....... .....||+.|+|||.+.+..++.++|||||||++|||++|.. ||. +...
T Consensus 165 ~~kl~DfG~a~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~-----------~~~~ 232 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-----------GMTC 232 (309)
T ss_dssp CEEECCTTCEESSCEECC-C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT-----------TCCH
T ss_pred ceEEcccccccccccccc-ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCC-----------CCCH
Confidence 999999999976543322 234568999999999999999999999999999999999765 543 2333
Q ss_pred hHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+....+..+..++. ...++.++.+++.+||+.||++||||+||++.|+
T Consensus 233 ~~~~~~i~~~~~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~ 281 (309)
T d1fvra_ 233 AELYEKLPQGYRLEK-----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 281 (309)
T ss_dssp HHHHHHGGGTCCCCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCC-----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 445555444322221 1234456888899999999999999999998875
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-44 Score=388.32 Aligned_cols=251 Identities=21% Similarity=0.296 Sum_probs=210.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|..+ +|+.||||+++.. ......+.+|++++++++|||||++++++.+++..|+||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~---~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvm 80 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCC---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 467999999999999999999765 6889999999753 233456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC--CceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE--YEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg~a~~~~~ 844 (964)
|||+||+|.+++.... ..+++.++..++.||++||+|||++ +|+||||||+||+++.+ ..+|++|||+++....
T Consensus 81 E~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~ 156 (321)
T d1tkia_ 81 EFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence 9999999999996543 3589999999999999999999999 99999999999999854 4899999999987654
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. ......+++.|+|||...+..++.++||||+||++|+|++|+.||.. ....+....+.......+
T Consensus 157 ~~-~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~-----------~~~~~~~~~i~~~~~~~~- 223 (321)
T d1tkia_ 157 GD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA-----------ETNQQIIENIMNAEYTFD- 223 (321)
T ss_dssp TC-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHHTCCCCC-
T ss_pred CC-cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCC-
Confidence 32 33456789999999999999999999999999999999999999753 233455566655554432
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........++.+++.+||.+||++|||++|+++
T Consensus 224 -~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 224 -EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp -HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1112234456788999999999999999999986
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-43 Score=383.02 Aligned_cols=267 Identities=24% Similarity=0.313 Sum_probs=204.2
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc----eeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----HSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 764 (964)
.+|...+.||+|+||+||+|++ +|+.||||++... .......+.|+..+.+++||||+++++++.+++ .+|+
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l 78 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence 4677888999999999999987 5889999998642 222223344566667889999999999997653 6899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE-----CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
|||||++|+|.+++++. .++|..+.+++.|+|.|++|+|+. ++++||||||||+|||++.++.+||+|||++
T Consensus 79 v~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~ 155 (303)
T d1vjya_ 79 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcc
Confidence 99999999999999764 489999999999999999999973 2359999999999999999999999999999
Q ss_pred cccCCCCC----CccccccccccccccccccCC------CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCC----CC
Q 037111 840 KLLKPDSS----NWSELAGTYGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL----PG 905 (964)
Q Consensus 840 ~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~------~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~----~~ 905 (964)
+....... ......||+.|+|||++.+.. ++.++|||||||++|||+||..||........... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T d1vjya_ 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccccc
Confidence 87654432 223567999999999987542 56789999999999999999988764433221111 11
Q ss_pred CChhHHHHhhhccCCCCCc-cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 906 ANMNEAIDHMFDARLPPPW-LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
................+.. ......+....+.+++.+||+.||++|||+.||++.|+
T Consensus 236 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~ 293 (303)
T d1vjya_ 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred chHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 2222333333444443221 22234456677999999999999999999999999885
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.1e-43 Score=391.85 Aligned_cols=251 Identities=21% Similarity=0.251 Sum_probs=200.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHH---HHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEF---LSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.++|++.+.||+|+||.||+|+.+ +|+.||||++..... .......+ ..|+.+++.++|||||++++++.+++..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 468999999999999999999765 699999999864221 11112233 3457778888999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+..
T Consensus 83 ~ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~ 157 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 157 (364)
T ss_dssp EEEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred EEEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeec
Confidence 99999999999999997654 478999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... .....||+.|+|||++.. ..|+.++||||+||++|||+||+.||..... ................
T Consensus 158 ~~~~--~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--------~~~~~~~~~~~~~~~~ 227 (364)
T d1omwa3 158 SKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--------KDKHEIDRMTLTMAVE 227 (364)
T ss_dssp SSSC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS--------SCHHHHHHHSSSCCCC
T ss_pred CCCc--ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcccCCCC
Confidence 5442 235679999999999874 5689999999999999999999999863221 1122222232222222
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPN-----MQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl~ 959 (964)
.+ ...+.++.+++.+||.+||++||| ++|+++
T Consensus 228 ~~------~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 228 LP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp CC------SSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CC------CCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 11 123345788889999999999999 677764
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-44 Score=385.32 Aligned_cols=249 Identities=26% Similarity=0.386 Sum_probs=200.1
Q ss_pred cceeecCCceeEEEEEeCCC----CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-CceeEEEEEe
Q 037111 694 SFCIGRGGYGSVYKAELPSG----DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-ARHSFLVYEY 768 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~ 768 (964)
.++||+|+||+||+|++.++ ..||||+++. .......++|.+|++++++++||||++++|++.+ ++..++||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~-~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~ 110 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 110 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECC-CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc-ccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence 56899999999999987532 2589999864 3345556789999999999999999999999865 5689999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++|+|.+++.... ...++..+.+++.|+++||.|+|+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 111 ~~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~ 186 (311)
T d1r0pa_ 111 MKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 186 (311)
T ss_dssp CTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred eecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence 99999999987543 3477888999999999999999999 9999999999999999999999999999876544322
Q ss_pred ----ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 849 ----WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 849 ----~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.....||+.|+|||.+.+..++.++||||||+++|||+||+.||..... ..+....+..+..+..
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~----------~~~~~~~i~~g~~~~~- 255 (311)
T d1r0pa_ 187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------TFDITVYLLQGRRLLQ- 255 (311)
T ss_dssp CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------------CHHHHHTTCCCCC-
T ss_pred cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCC----------HHHHHHHHHcCCCCCC-
Confidence 2335689999999999999999999999999999999998888643211 1122233333322211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...++.++.+++.+||+.||++||+++||++.|+
T Consensus 256 ----p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~ 289 (311)
T d1r0pa_ 256 ----PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 289 (311)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1223456888999999999999999999999886
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-44 Score=386.35 Aligned_cols=256 Identities=21% Similarity=0.366 Sum_probs=213.7
Q ss_pred hhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|+..+.||+|+||+||+|.++ +++.||||+++.. ........|.+|+.++++++|||||++++++..++.
T Consensus 19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~-~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~ 97 (308)
T d1p4oa_ 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 97 (308)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc-cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence 468999999999999999999763 3578999999753 344455679999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhc--------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 762 SFLVYEYLERGSLARILSSE--------TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
.++||||+++|+|.+++... ....+++..+.+++.|+++||.|||++ +|+||||||+|||+++++++||
T Consensus 98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl 174 (308)
T d1p4oa_ 98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 174 (308)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEE
T ss_pred eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEE
Confidence 99999999999999998642 223478899999999999999999999 9999999999999999999999
Q ss_pred eccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCC-CCCCccccccCCCCCCCChhH
Q 037111 834 SDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ-HPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~-~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+|||+|+........ .....||+.|+|||.+.+..++.++||||||+++|||+||+ .||. +....+
T Consensus 175 ~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~-----------~~~~~~ 243 (308)
T d1p4oa_ 175 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-----------GLSNEQ 243 (308)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT-----------TSCHHH
T ss_pred eecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCC-----------CCCHHH
Confidence 999999876544332 23346899999999999999999999999999999999985 5543 334455
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+.++..++.. ..++..+.+++.+||+.||++|||+++|++.|+.
T Consensus 244 ~~~~i~~~~~~~~p-----~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 291 (308)
T d1p4oa_ 244 VLRFVMEGGLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 291 (308)
T ss_dssp HHHHHHTTCCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred HHHHHHhCCCCCCc-----ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 56666555443321 2344568899999999999999999999999975
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-44 Score=388.90 Aligned_cols=252 Identities=20% Similarity=0.272 Sum_probs=201.1
Q ss_pred hhcccccc-eeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHh-CCCCCceeeEEeeeec----Cc
Q 037111 688 INNFDESF-CIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALT-GVRHRNIVKFYGFCSH----AR 760 (964)
Q Consensus 688 ~~~~~~~~-~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~ 760 (964)
.++|++.. .||+|+||+||+|+. .+++.||||+++. ...+.+|+.++. ..+|||||+++++|.+ +.
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~ 82 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 82 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-------cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence 46798865 699999999999975 5789999999863 145678998865 4589999999999875 46
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccC
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFG 837 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg 837 (964)
..|+|||||+||+|.+++...+...+++.+++.++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 83 ~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG 159 (335)
T d2ozaa1 83 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 159 (335)
T ss_dssp EEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccc
Confidence 789999999999999999876666799999999999999999999999 9999999999999986 4679999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
+|+....... .....||+.|+|||++.+..|+.++||||+||++|+|+||+.||........ .......+..
T Consensus 160 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~-------~~~~~~~i~~ 231 (335)
T d2ozaa1 160 FAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------SPGMKTRIRM 231 (335)
T ss_dssp TCEECCCCCC-CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------------CCCS
T ss_pred eeeeccCCCc-cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH-------HHHHHHHHhc
Confidence 9987665433 3456899999999999999999999999999999999999999864332110 0011112222
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+ .......+.++.+++.+||.+||++|||+.|+++
T Consensus 232 ~~~~~~--~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 232 GQYEFP--NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp CSSSCC--TTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCC--CcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 222111 1122344567889999999999999999999976
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-44 Score=387.34 Aligned_cols=257 Identities=24% Similarity=0.391 Sum_probs=209.2
Q ss_pred hcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 761 (964)
++|+..+.||+|+||.||+|++ .+++.||||+++... ......++.+|+.+++++ +|||||+++++|.++..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~ 101 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc-CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence 5789999999999999999975 245689999997533 444566899999999998 69999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcC----------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE
Q 037111 762 SFLVYEYLERGSLARILSSET----------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL 825 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill 825 (964)
.++||||+++|+|.+++.... ...+++..+.+++.||++|++|||++ ++|||||||+||++
T Consensus 102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~ 178 (311)
T d1t46a_ 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (311)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccccccccc
Confidence 999999999999999997543 23588999999999999999999999 99999999999999
Q ss_pred CCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCC
Q 037111 826 DFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL 903 (964)
Q Consensus 826 ~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~ 903 (964)
+.++.+|++|||.++........ .....||+.|+|||.+.++.++.++|||||||++|||+|++.|+...
T Consensus 179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~-------- 250 (311)
T d1t46a_ 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG-------- 250 (311)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT--------
T ss_pred cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCC--------
Confidence 99999999999999877654332 23457899999999999999999999999999999999955553211
Q ss_pred CCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 904 PGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+.+.+++....++.. ....+.++.+++.+||+.||++||||++|+++|++
T Consensus 251 --~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~ 304 (311)
T d1t46a_ 251 --MPVDSKFYKMIKEGFRMLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (311)
T ss_dssp --CCSSHHHHHHHHHTCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CCHHHHHHHHHhcCCCCCC----cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1112333333333333221 12234568889999999999999999999999863
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-44 Score=383.59 Aligned_cols=255 Identities=23% Similarity=0.377 Sum_probs=203.5
Q ss_pred hhcccccceeecCCceeEEEEEeCC--------CCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS--------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
.++|++.+.||+|+||.||+|+... +..||||+++.. .......++.+|...+.++ +|||||+++++|.+
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcc-cChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 3689999999999999999997532 247999998753 3344557888899988887 79999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 759 ARHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
++..++||||+++|+|.+++.... ...+++..+++++.||+.||+|||+. +||||||||+|||
T Consensus 91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiL 167 (299)
T d1fgka_ 91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 167 (299)
T ss_dssp SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeeccccee
Confidence 999999999999999999997543 24589999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
++.++.+||+|||+++....... ......+++.|+|||.+.++.|+.++|||||||++|||++ |+.||..
T Consensus 168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~------- 240 (299)
T d1fgka_ 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------- 240 (299)
T ss_dssp ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-------
T ss_pred ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCC-------
Confidence 99999999999999987654432 2334568999999999999999999999999999999998 6777642
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+....+..+..+ +.. ...+.++.+++.+||+.||++|||++||++.|+
T Consensus 241 ----~~~~~~~~~i~~~~~~-~~p----~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~ 292 (299)
T d1fgka_ 241 ----VPVEELFKLLKEGHRM-DKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292 (299)
T ss_dssp ----CCHHHHHHHHHTTCCC-CCC----SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHcCCCC-CCC----ccchHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 2223333333332222 111 123456888999999999999999999999986
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-43 Score=381.91 Aligned_cols=266 Identities=22% Similarity=0.334 Sum_probs=203.3
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|++.+.||+|+||+||+|+. .+|+.||||+++...........+.+|+.++++++|||||++++++.+++..|+|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 6899999999999999999975 579999999997544333445788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+.+ ++.+++.......+++..+..++.||+.||+|||++ +||||||||+||+++.++.+||+|||.|+.......
T Consensus 82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~ 157 (298)
T d1gz8a_ 82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157 (298)
T ss_dssp CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCCcc
Confidence 9975 566666555566799999999999999999999999 999999999999999999999999999988776655
Q ss_pred CccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccC--------CCCCCCChhHHHHhh--h
Q 037111 848 NWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD--------SSLPGANMNEAIDHM--F 916 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~--------~~~~~~~~~~~~~~~--~ 916 (964)
......||+.|+|||.+.... ++.++||||+||++|+|++|+.||........ .......... .... .
T Consensus 158 ~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~ 236 (298)
T d1gz8a_ 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG-VTSMPDY 236 (298)
T ss_dssp CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT-GGGSTTC
T ss_pred cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccc-ccccccc
Confidence 566678999999999887666 47899999999999999999999863321000 0000000000 0000 0
Q ss_pred ccCCC---CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 DARLP---PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+ .............++.+++.+||..||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~ 282 (298)
T d1gz8a_ 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282 (298)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 00000 00000011122356788899999999999999999986
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=383.68 Aligned_cols=256 Identities=23% Similarity=0.376 Sum_probs=194.6
Q ss_pred hhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC-
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA- 759 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 759 (964)
.++|++.+.||+|+||.||+|++. +++.||||+++... .....+.+.+|...+.++ +|+||+.+++++...
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~ 90 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 90 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence 367999999999999999999753 34679999987533 334456777888877766 689999999998664
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE
Q 037111 760 RHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL 825 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill 825 (964)
...++|||||++|+|.+++.... ...+++..+..++.||++||+|||++ +||||||||+|||+
T Consensus 91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl 167 (299)
T d1ywna1 91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 167 (299)
T ss_dssp SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeE
Confidence 56899999999999999997532 23488999999999999999999999 99999999999999
Q ss_pred CCCCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCC-CCCCccccccCCC
Q 037111 826 DFEYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ-HPKDLLSSLSDSS 902 (964)
Q Consensus 826 ~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~-~p~~~~~~~~~~~ 902 (964)
+.++.+||+|||+|+....... ......||+.|+|||.+.+..++.++|||||||++|||+||. .||....
T Consensus 168 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~------ 241 (299)
T d1ywna1 168 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK------ 241 (299)
T ss_dssp CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCC------
Confidence 9999999999999987654432 234567999999999999999999999999999999999975 4654211
Q ss_pred CCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 903 LPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+.+...+.....++. ....+.++.+++.+||+.||++|||++||++.|+
T Consensus 242 -----~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~ 292 (299)
T d1ywna1 242 -----IDEEFCRRLKEGTRMRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 292 (299)
T ss_dssp -----CSHHHHHHHHHTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----HHHHHHHHHhcCCCCCC----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11222222222111111 1223456888999999999999999999999885
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-43 Score=383.12 Aligned_cols=251 Identities=23% Similarity=0.275 Sum_probs=195.7
Q ss_pred ccceeecCCceeEEEEEeC-CCCeEEEEEeccccCch---hhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 693 ESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGET---THQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
..++||+|+||+||+|+.+ +|+.||||+++...... ...+.+.+|+.++++++|||||++++++.+++..|+||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 4578999999999999764 68999999986432211 1124688999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+.++++..+... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+........
T Consensus 82 ~~~~~~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~ 156 (299)
T d1ua2a_ 82 METDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 156 (299)
T ss_dssp CSEEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred hcchHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCccc
Confidence 999877766643 34488889999999999999999999 9999999999999999999999999999877666555
Q ss_pred ccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc----------
Q 037111 849 WSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---------- 917 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 917 (964)
.....||+.|+|||++.+. .++.++||||+||++|||+||+.||..... .+.+..+..
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~-----------~~~l~~i~~~~~~~~~~~~ 225 (299)
T d1ua2a_ 157 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-----------LDQLTRIFETLGTPTEEQW 225 (299)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHHHCCCCTTTS
T ss_pred ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCH-----------HHHHHHHHHhcCCCChhhc
Confidence 5567899999999998754 579999999999999999999999853221 111111110
Q ss_pred ------------cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ------------ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.............++.+++.+||..||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 226 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence 000100000111123356888999999999999999999986
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=6e-43 Score=375.48 Aligned_cols=265 Identities=23% Similarity=0.339 Sum_probs=201.6
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|+||+||+|+.++|+.||||++............+.+|+.++++++|||||++++++.+++..++||||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 58999999999999999999999999999999976544444457899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+.++.+..+... ...+++..+..++.||+.||+|||++ +||||||||+||+++.++.+|++|||.|.........
T Consensus 82 ~~~~~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 156 (286)
T d1ob3a_ 82 LDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (286)
T ss_dssp CSEEHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred ehhhhHHHHHhh--cCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCccc
Confidence 988777766643 34599999999999999999999999 9999999999999999999999999999887665555
Q ss_pred ccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccc-------------CCCCCCCChhHHHHh
Q 037111 849 WSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS-------------DSSLPGANMNEAIDH 914 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~-------------~~~~~~~~~~~~~~~ 914 (964)
.....+++.|+|||.+.+. .++.++||||+||++|||++|+.||....... ....+..........
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T d1ob3a_ 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236 (286)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccc
Confidence 5566789999999998754 46899999999999999999999986432110 000000000000000
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+ ...........+.+++.+||.+||++|||++|+++
T Consensus 237 ~~~~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 237 NFTVYEPLP-WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp TCCCCCCCC-GGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccCcc-hhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000000 11112223456788899999999999999999973
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-43 Score=373.32 Aligned_cols=241 Identities=20% Similarity=0.336 Sum_probs=195.8
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCc----hhhHHHHHHHHHHHhCCC--CCceeeEEeeeecCce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGE----TTHQKEFLSEIKALTGVR--HRNIVKFYGFCSHARH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~ 761 (964)
++|++.+.||+|+||+||+|+. .+|+.||||++...... ......+.+|+.++++++ |||||++++++.+++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 4799999999999999999976 47899999998643211 112234678999999886 8999999999999999
Q ss_pred eEEEEEeccC-CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccCcc
Q 037111 762 SFLVYEYLER-GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGTA 839 (964)
Q Consensus 762 ~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~a 839 (964)
.++||||+.+ +++.+++.... .+++..++.++.||++||+|||++ +|+||||||+||+++.+ +.+||+|||+|
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a 158 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSG 158 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEEEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECccccc
Confidence 9999999986 58888886543 489999999999999999999999 99999999999999865 79999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
+..... ......||+.|+|||++.+..+ +.++||||+||++|||+||+.||.... + +...
T Consensus 159 ~~~~~~--~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-------------~----i~~~ 219 (273)
T d1xwsa_ 159 ALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------------E----IIRG 219 (273)
T ss_dssp EECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------H----HHHC
T ss_pred eecccc--cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-------------H----Hhhc
Confidence 865433 3345689999999999987765 567899999999999999999985321 1 1111
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+ ...+.++.+++.+||..||++|||++|+++
T Consensus 220 ~~~~~------~~~s~~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 220 QVFFR------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp CCCCS------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCCC------CCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 11111 112345778889999999999999999976
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-42 Score=371.57 Aligned_cols=256 Identities=21% Similarity=0.332 Sum_probs=194.9
Q ss_pred hhcccccceeecCCceeEEEEEe-CC-CCeEEEEEeccccCchhhHHHHHHHHHHHhCC---CCCceeeEEeeeec----
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGV---RHRNIVKFYGFCSH---- 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~---- 758 (964)
.++|++.+.||+|+||+||+|+. ++ ++.||||+++...........+.+|+.+++.+ +||||++++++|..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 36899999999999999999976 44 55799999875433333334455677766554 89999999999853
Q ss_pred -CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccC
Q 037111 759 -ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 759 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
....+++|||+.+|++.... ......+++..++.++.|++.||+|||++ +||||||||+|||++.++.+||+|||
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg 161 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 161 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred cCceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchh
Confidence 35789999999887665443 34445689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
+++..... .......||+.|+|||++.+..|+.++||||+||++|||++|+.||..... .+.+..+..
T Consensus 162 ~~~~~~~~-~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~-----------~~~~~~i~~ 229 (305)
T d1blxa_ 162 LARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-----------VDQLGKILD 229 (305)
T ss_dssp SCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHH
T ss_pred hhhhhccc-ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCH-----------HHHHHHHHH
Confidence 98764432 233466899999999999999999999999999999999999999863321 111111100
Q ss_pred ---------------------cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ---------------------ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..................+.+++.+||.+||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 230 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp HHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000000011111223345778899999999999999999975
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=4.1e-42 Score=374.84 Aligned_cols=293 Identities=31% Similarity=0.493 Sum_probs=168.8
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCc--eeeceEeCCC---CCeeEEecCCCCCCCccCCCccC
Q 037111 7 SNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPC--TWSGISCNHA---GRIISINLTSTSLKGTLDQFPFS 81 (964)
Q Consensus 7 ~~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C--~w~gv~C~~~---~~v~~l~l~~~~l~g~l~~~~~~ 81 (964)
-|.++|++|||+||+++++++ .++||..+ +||| .|+||+|+.. +||++|+|+++++.|..
T Consensus 2 ~c~~~e~~aLl~~k~~~~~~~--~l~sW~~~-------~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~------ 66 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGNPT--TLSSWLPT-------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY------ 66 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG--GGTTCCTT-------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCE------
T ss_pred CCCHHHHHHHHHHHHHCCCCC--cCCCCCCC-------CCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCC------
Confidence 489999999999999998653 69999743 7899 4999999864 37888887777666532
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeeccc-CCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSS-NHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKN 159 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~ 159 (964)
.+|++|++|++|++|+|++ |+++|.+|++|++|++|++|+|++|++.+.++. +..+.+|+.
T Consensus 67 -----------------~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 67 -----------------PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp -----------------ECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred -----------------CCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 2445555555555555543 455555555555555555555555555544443 444555555
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCc-chhhcccccccCCccccccCccccceeeccccc
Q 037111 160 LALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL-VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 160 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
+++++|.+.+.+|..++++++|+++++++|.+++.+|..+..+.++ +.+++++|++++..|..+..+..+ .++++++.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~ 208 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSE
T ss_pred cccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 5555555555555555555555555555555555555555554443 445555555555555554444332 45555555
Q ss_pred cCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcc
Q 037111 239 LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQN 318 (964)
Q Consensus 239 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 318 (964)
+.+.+|..++.+++|+.+++++|.+.+.+| .+..+++|+.|+|++|+++|.+|..|+++++|++|+|++|+|+|.+|.
T Consensus 209 ~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~- 286 (313)
T d1ogqa_ 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ- 286 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-
T ss_pred cccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-
Confidence 555555555555555555555555554333 344455555555555555555555555555555555555555555543
Q ss_pred cccCCcceEEEeeccc
Q 037111 319 ICQSGSLQYFSVHDNY 334 (964)
Q Consensus 319 ~~~~~~L~~L~l~~n~ 334 (964)
+..+++|+.+++++|+
T Consensus 287 ~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 287 GGNLQRFDVSAYANNK 302 (313)
T ss_dssp STTGGGSCGGGTCSSS
T ss_pred cccCCCCCHHHhCCCc
Confidence 3444555555555554
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-41 Score=360.76 Aligned_cols=256 Identities=20% Similarity=0.314 Sum_probs=206.8
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|++.+.||+|+||+||+|+. .+++.||||+++...........+.+|+.+++.++||||+++++++.+....++|+|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 5799999999999999999976 578899999997655555567889999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
++.++++..++... ..+++..+..++.|+++||+|||++ +||||||||+||+++.++.+|++|||.|+.......
T Consensus 82 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~ 156 (292)
T d1unla_ 82 FCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS
T ss_pred eccccccccccccc--cccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCCc
Confidence 99999998887543 4588999999999999999999999 999999999999999999999999999988766655
Q ss_pred CccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc---cC----
Q 037111 848 NWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---AR---- 919 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---- 919 (964)
......+++.|+|||.+.... ++.++||||+||++|||++|+.||..... ..+....+.. ..
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~~~ 226 (292)
T d1unla_ 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND----------VDDQLKRIFRLLGTPTEEQ 226 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS----------HHHHHHHHHHHHCCCCTTT
T ss_pred cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCC----------HHHHHHHHHhhcCCCChhh
Confidence 555567788999999987665 68999999999999999999999742221 1111111100 00
Q ss_pred ---------------CC-CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 ---------------LP-PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ---------------~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+ ..............+.+++.+|+++||.+|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 00001111223345778899999999999999999975
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-40 Score=360.59 Aligned_cols=267 Identities=19% Similarity=0.287 Sum_probs=195.1
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--------
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-------- 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 758 (964)
.++|++.+.||+|+||+||+|+. ++|+.||||++............+.+|+.++++++||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 47899999999999999999976 579999999987554444555778899999999999999999999855
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
++..|+||||+.++.+..+. .....+++..++.++.||++||+|||++ +|+||||||+||+++.++.+|++|||+
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~--~~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~ 163 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 163 (318)
T ss_dssp --CEEEEEECCCEEHHHHHT--CTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccCCCccchhh--hcccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecce
Confidence 34689999999887766554 3344588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC----CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------------
Q 037111 839 AKLLKPDSS----NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD------------- 900 (964)
Q Consensus 839 a~~~~~~~~----~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~------------- 900 (964)
++....... ......||+.|+|||.+.+. .++.++||||+||++|||++|+.||........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 976654322 22345799999999998765 689999999999999999999999863221000
Q ss_pred CCCCCCChhHHHHhhhccCCCCCccccc--hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 901 SSLPGANMNEAIDHMFDARLPPPWLEVG--VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
............................ .......+.+++.+||..||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~ 304 (318)
T d3blha1 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304 (318)
T ss_dssp TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence 0000000000000000000000000000 0111235668899999999999999999986
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-40 Score=363.70 Aligned_cols=260 Identities=20% Similarity=0.290 Sum_probs=194.8
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------e
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------H 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 761 (964)
++|++.+.||+|+||+||+|.. .+|+.||||+++.........+.+.+|+.++++++|||||+++++|...+ +
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 4799999999999999999975 46999999999765555555678899999999999999999999997654 5
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||+ +++|..+.+.. .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+|++|||.|+.
T Consensus 98 ~~lv~e~~-~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~ 170 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 170 (346)
T ss_dssp CEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecc-cccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceec
Confidence 79999999 55888877543 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccC--------CCC-----CCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD--------SSL-----PGAN 907 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~--------~~~-----~~~~ 907 (964)
.... .....||+.|+|||.+.+. .++.++||||+||++|||++|+.||........ ... ....
T Consensus 171 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (346)
T d1cm8a_ 171 ADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 247 (346)
T ss_dssp CCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred cCCc---cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhc
Confidence 6533 3456799999999998764 568999999999999999999999864322100 000 0000
Q ss_pred --hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 --MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......... ..................+.+++.+||..||++|||++|+++
T Consensus 248 ~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~ 300 (346)
T d1cm8a_ 248 SDEAKNYMKGL-PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300 (346)
T ss_dssp CHHHHHHHHHS-CCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhhhhhhccC-CcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000000001 111111111111223345778999999999999999999986
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-40 Score=364.72 Aligned_cols=263 Identities=22% Similarity=0.336 Sum_probs=194.2
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc----eeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----HSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~ 763 (964)
.+|++.+.||+|+||+||+|+. .+|+.||||++.... .....+.+.+|+.++++++||||+++++++.... ..+
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~ 86 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 86 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc-ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence 4699999999999999999965 589999999997533 3444567899999999999999999999997653 234
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
++++|+.+|+|.+++... .+++..++.++.|+++||+|||++ +||||||||+|||++.++.+||+|||+|+...
T Consensus 87 ~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~ 160 (345)
T d1pmea_ 87 YLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 160 (345)
T ss_dssp EEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeecc
Confidence 555667789999999654 489999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCC---Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------CCCC------C
Q 037111 844 PDSS---NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------SLPG------A 906 (964)
Q Consensus 844 ~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------~~~~------~ 906 (964)
.... ......||+.|+|||.+.. ..++.++||||+||++|||++|+.||......... ..+. .
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
T d1pmea_ 161 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 240 (345)
T ss_dssp GGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhh
Confidence 4322 2345678999999999854 45788999999999999999999998643221000 0000 0
Q ss_pred ChhHHHHhh--hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 907 NMNEAIDHM--FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 907 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......... .....+.++ .........++.+++.+||..||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~ 294 (345)
T d1pmea_ 241 INLKARNYLLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294 (345)
T ss_dssp CCHHHHHHHHTSCCCCCCCH-HHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhhhcccccCCccCCCCH-HHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000000 001111111 1111122345788999999999999999999986
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-40 Score=362.20 Aligned_cols=260 Identities=25% Similarity=0.330 Sum_probs=192.1
Q ss_pred cccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec------Ccee
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------ARHS 762 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~~ 762 (964)
+|+..++||+|+||+||+|+.+ +|+.||||++..... ...+|++++++++||||++++++|.. ..+.
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~ 94 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 94 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence 6889999999999999999764 799999999875322 22369999999999999999999854 2357
Q ss_pred EEEEEeccCCCHHHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccCccc
Q 037111 763 FLVYEYLERGSLARILSS-ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAK 840 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~ 840 (964)
++||||+++|.+...... .....+++..++.++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+++
T Consensus 95 ~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~ 171 (350)
T d1q5ka_ 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171 (350)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred EEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchh
Confidence 999999987544433321 3445699999999999999999999999 999999999999999875 89999999998
Q ss_pred ccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHHhh
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAIDHM 915 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~~ 915 (964)
....... .....|++.|+|||.+.+ ..++.++||||+||++|||++|+.||.......... ..+....+.....
T Consensus 172 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~ 250 (350)
T d1q5ka_ 172 QLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250 (350)
T ss_dssp ECCTTSC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred hccCCcc-cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhh
Confidence 7654432 334679999999998775 568999999999999999999999986332210000 0000000111111
Q ss_pred ----hccCCC----CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 ----FDARLP----PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 ----~~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+ .++..........++.+++.+||..||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 302 (350)
T d1q5ka_ 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302 (350)
T ss_dssp CC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 001111 11111112233456788899999999999999999985
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-40 Score=360.44 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=203.1
Q ss_pred hhcccccceeecCCceeEEEEEe----CCCCeEEEEEecccc--CchhhHHHHHHHHHHHhCCCC-CceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL----PSGDTVAVKKLHSFT--GETTHQKEFLSEIKALTGVRH-RNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~ 760 (964)
.++|++.+.||+|+||+||+|+. .+|+.||||+++... .+....+.+.+|+.++++++| |||+++++++.+..
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence 47899999999999999999964 257899999986432 122334568899999999976 89999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+.+|+|.+++..... +++..+..++.||+.|++|+|+. +||||||||+||+++.++.+||+|||+|+
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~~~~--~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~ 177 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQRER--FTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 177 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred ceeeeeecccccHHHHHHHhccc--ccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchh
Confidence 99999999999999999976554 67888999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC-CCccccccccccccccccccC--CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 841 LLKPDS-SNWSELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 841 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~--~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
...... .......|++.|+|||.+.+. .++.++||||+||++|||++|+.||..... .............
T Consensus 178 ~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~-------~~~~~~i~~~~~~ 250 (322)
T d1vzoa_ 178 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE-------KNSQAEISRRILK 250 (322)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS-------CCCHHHHHHHHHH
T ss_pred hhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHhccc
Confidence 665432 233456799999999998764 367899999999999999999999864332 1122233333333
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPN-----MQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl~ 959 (964)
...+.+ .....++.+++.+||.+||++||| ++|+++
T Consensus 251 ~~~~~~------~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 251 SEPPYP------QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp CCCCCC------TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred CCCCCc------ccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 332221 124456788889999999999994 788875
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.5e-40 Score=355.40 Aligned_cols=256 Identities=19% Similarity=0.260 Sum_probs=194.8
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc-eeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN-IVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||+||+|+. .+|+.||||++..... ..++..|+++++.++|++ |+.+.+++.+++..++||
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivm 82 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEE
Confidence 4699999999999999999976 4688999998764322 235778999999998666 555566667788899999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~a~~~~ 843 (964)
||+. |++.+.+.... ..+++..+..++.|++.||+|||++ +||||||||+||+++. +..+|++|||+|+...
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~ 157 (299)
T d1ckia_ 83 ELLG-PSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 157 (299)
T ss_dssp ECCC-CBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred EEcC-Cchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceecc
Confidence 9994 57777665433 4589999999999999999999999 9999999999999864 4579999999998775
Q ss_pred CCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 844 PDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 844 ~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
.... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||......... ...........
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~----~~~~~~~~~~~ 233 (299)
T d1ckia_ 158 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR----QKYERISEKKM 233 (299)
T ss_dssp CTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-----------HHHHHHHHH
T ss_pred ccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHH----HHHHHhhcccC
Confidence 4332 123457999999999999999999999999999999999999998643321110 00111111111
Q ss_pred ccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 917 DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
. .+. ......++.++.+++.+||+.+|++||+++++.+.|+
T Consensus 234 ~--~~~---~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 274 (299)
T d1ckia_ 234 S--TPI---EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 274 (299)
T ss_dssp H--SCH---HHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred C--CCh---hHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 1 110 1111234466888999999999999999999988775
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=4.2e-40 Score=353.35 Aligned_cols=256 Identities=18% Similarity=0.246 Sum_probs=201.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC-CceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH-RNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+|++.++.++| +|++.+++++..+...++||
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm 80 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 80 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence 47999999999999999999764 688999998764322 1346678888888864 99999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-----CCceEEeccCcccc
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-----EYEAHVSDFGTAKL 841 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-----~~~~kl~Dfg~a~~ 841 (964)
||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+|+.
T Consensus 81 e~~-~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~ 155 (293)
T d1csna_ 81 DLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 155 (293)
T ss_dssp ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEE
Confidence 999 679999986544 4589999999999999999999999 9999999999999975 57899999999987
Q ss_pred cCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 842 LKPDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 842 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
...... ......||+.|||||.+.+..++.++|||||||++|||+||+.||..... ........+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~--------~~~~~~~~~ 227 (293)
T d1csna_ 156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA--------ATNKQKYER 227 (293)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS--------CCHHHHHHH
T ss_pred cccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccc--------hhHHHHHHH
Confidence 654321 22345799999999999999999999999999999999999999863222 111122222
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+...+...+ .......+++++.+++..|++.+|++||+++.+.+.|+
T Consensus 228 i~~~~~~~~-~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~ 274 (293)
T d1csna_ 228 IGEKKQSTP-LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 274 (293)
T ss_dssp HHHHHHHSC-HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHhccCCCC-hHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 211111111 01111234456888899999999999999998887764
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.7e-39 Score=355.85 Aligned_cols=257 Identities=21% Similarity=0.318 Sum_probs=194.7
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeec--CceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSH--ARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~l 764 (964)
++|++.+.||+|+||+||+|+. .+|+.||||+++.. ..+.+.+|+.++++++ ||||+++++++.. ....++
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~ 109 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 109 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-----HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence 5899999999999999999976 47899999998632 2467889999999985 9999999999974 357899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccCcccccC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLK 843 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~ 843 (964)
||||+.+|+|..+. ..+++..++.++.||+.||+|||++ +||||||||+|||++.++ .+|++|||+|+...
T Consensus 110 v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~ 181 (328)
T d3bqca1 110 VFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 181 (328)
T ss_dssp EEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECC
T ss_pred EEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceecc
Confidence 99999999998764 3489999999999999999999999 999999999999998765 68999999998765
Q ss_pred CCCCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC-----CC-ChhHHHH---
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP-----GA-NMNEAID--- 913 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~-----~~-~~~~~~~--- 913 (964)
.... .....+|+.|+|||.+.+.. ++.++||||+||++|||++|+.||............ +. .......
T Consensus 182 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 260 (328)
T d3bqca1 182 PGQE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 260 (328)
T ss_dssp TTCC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred CCCc-ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcc
Confidence 4432 34567899999999987654 799999999999999999999998643221000000 00 0000000
Q ss_pred --------hhhccCCCCCc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 --------HMFDARLPPPW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 --------~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..........+ ..........++.+++.+||..||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 261 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp CCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000000000 00011223456788999999999999999999986
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-39 Score=355.89 Aligned_cols=260 Identities=19% Similarity=0.263 Sum_probs=191.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec------Cce
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------ARH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 761 (964)
++|++.+.||+|+||+||+|+.. +|+.||||++............+.+|+.++++++|||||+++++|.. ..+
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 57999999999999999999765 69999999998655555666788999999999999999999999964 468
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||+.++.+ +.+. ..+++..++.++.||+.|++|||++ ||+||||||+||+++.++.+|++|||.++.
T Consensus 97 ~~iv~Ey~~~~l~-~~~~----~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~ 168 (355)
T d2b1pa1 97 VYLVMELMDANLC-QVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_dssp EEEEEECCSEEHH-HHHT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred eEEEEeccchHHH-Hhhh----cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhc
Confidence 8999999977544 4442 3488999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC---------C----CCCCCCh
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD---------S----SLPGANM 908 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~---------~----~~~~~~~ 908 (964)
..... ......+|+.|+|||.+.+..++.++||||+||++|||++|+.||........ . .....
T Consensus 169 ~~~~~-~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~-- 245 (355)
T d2b1pa1 169 AGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL-- 245 (355)
T ss_dssp -------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTS--
T ss_pred ccccc-ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHh--
Confidence 55432 33455789999999999999999999999999999999999999853221000 0 00000
Q ss_pred hHHHHhhhccCCC--------------CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 909 NEAIDHMFDARLP--------------PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 909 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
............. .+...........++.+++.+|+..||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0011111111100 01111223445677889999999999999999999974
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-39 Score=355.56 Aligned_cols=261 Identities=20% Similarity=0.290 Sum_probs=195.3
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----cee
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 762 (964)
++|++.+.||+|+||+||+|+. .+|+.||||++..........+.+.+|+.++++++|||||++++++... ...
T Consensus 18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~ 97 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 97 (348)
T ss_dssp TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence 4799999999999999999975 5799999999986555555667889999999999999999999998643 344
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
++|++|+.+|+|.+++.. ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+|++|||.|...
T Consensus 98 ~~i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~ 171 (348)
T d2gfsa1 98 VYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 171 (348)
T ss_dssp CEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CC
T ss_pred EEEEEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhccc
Confidence 667788889999999954 3499999999999999999999999 9999999999999999999999999999754
Q ss_pred CCCCCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccC--------CC-----CCCCCh
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD--------SS-----LPGANM 908 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~--------~~-----~~~~~~ 908 (964)
.. ......|++.|+|||...+.. ++.++||||+||++|+|++|+.||........ .. ......
T Consensus 172 ~~---~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (348)
T d2gfsa1 172 DD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248 (348)
T ss_dssp TG---GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCC
T ss_pred Cc---ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccc
Confidence 32 234567899999999877654 68899999999999999999999853221100 00 000000
Q ss_pred hHHHHhhhc--cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 909 NEAIDHMFD--ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 909 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........ ...+..............+.+++.+|+..||++|||++|+++
T Consensus 249 -~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~ 300 (348)
T d2gfsa1 249 -ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300 (348)
T ss_dssp -HHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -hhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence 00000000 011111111111123345778999999999999999999986
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.3e-34 Score=318.75 Aligned_cols=261 Identities=19% Similarity=0.239 Sum_probs=188.7
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-----------CCceeeEEeeee
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-----------HRNIVKFYGFCS 757 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 757 (964)
+|++.+.||+|+||+||+|+. .+|+.||||+++.. ......+.+|+.+++.++ |+||+++++++.
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~---~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~ 90 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 90 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc---ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence 599999999999999999976 47999999999742 223356678888877664 588999999886
Q ss_pred cC--ceeEEEEEeccCC-CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCC----
Q 037111 758 HA--RHSFLVYEYLERG-SLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEY---- 829 (964)
Q Consensus 758 ~~--~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~---- 829 (964)
.. ...+++|+++..+ +............+++..+..++.||+.|++|||+ . +|+||||||+|||++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~~~ 167 (362)
T d1q8ya_ 91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPEN 167 (362)
T ss_dssp EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTTT
T ss_pred eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCcccc
Confidence 53 4566777776555 34444444555678999999999999999999998 5 999999999999998765
Q ss_pred --ceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC---
Q 037111 830 --EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP--- 904 (964)
Q Consensus 830 --~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~--- 904 (964)
.++++|||.|...... .....||+.|+|||.+.+..++.++||||+||++++|++|+.||............
T Consensus 168 ~~~~kl~dfg~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~ 244 (362)
T d1q8ya_ 168 LIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 244 (362)
T ss_dssp EEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred cceeeEeecccccccccc---cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHH
Confidence 3999999999765433 23467999999999999999999999999999999999999998643321100000
Q ss_pred -------CCChhHHHH------hhhc-----cCCCCCc----------cccchHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 037111 905 -------GANMNEAID------HMFD-----ARLPPPW----------LEVGVEDKLKSIIEVALSCVDANPERRPNMQI 956 (964)
Q Consensus 905 -------~~~~~~~~~------~~~~-----~~~~~~~----------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~e 956 (964)
+....+... .... ..+.... ..........++.+++.+|+..||++|||++|
T Consensus 245 ~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e 324 (362)
T d1q8ya_ 245 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 324 (362)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHH
Confidence 000000000 0000 0000000 00112456778899999999999999999999
Q ss_pred HHH
Q 037111 957 VCK 959 (964)
Q Consensus 957 vl~ 959 (964)
+++
T Consensus 325 ~L~ 327 (362)
T d1q8ya_ 325 LVN 327 (362)
T ss_dssp HHT
T ss_pred Hhc
Confidence 975
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.96 E-value=2.4e-29 Score=281.88 Aligned_cols=357 Identities=25% Similarity=0.336 Sum_probs=187.1
Q ss_pred EeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCC
Q 037111 89 LDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLD 168 (964)
Q Consensus 89 L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~ 168 (964)
.+++.+++++.++ ...+.+|++|++++++|+. + +.++.|++|++|++++|++++.+ .++.+++|++|++++|+++
T Consensus 27 ~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~l~-~l~~L~~L~~L~L~~n~i~ 101 (384)
T d2omza2 27 TVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDIT-PLKNLTKLVDILMNNNQIA 101 (384)
T ss_dssp HHTTCSSTTSEEC--HHHHTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCC
T ss_pred HHhCCCCCCCccC--HHHhCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCCCc-cccCCcccccccccccccc
Confidence 4566666665543 3456677777777777763 3 34666677777777777666543 3666666677777766666
Q ss_pred CCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhh
Q 037111 169 GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIG 248 (964)
Q Consensus 169 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 248 (964)
+.. .++++++|+.|++++|.+++..+ ......+..+....|.+....+................. ....+.
T Consensus 102 ~i~--~l~~l~~L~~L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 172 (384)
T d2omza2 102 DIT--PLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVT-----DLKPLA 172 (384)
T ss_dssp CCG--GGTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCC-----CCGGGT
T ss_pred ccc--ccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccc-----hhhhhc
Confidence 432 25666666666666666664322 223344455555555544332222111111111111111 111222
Q ss_pred cccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEE
Q 037111 249 NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYF 328 (964)
Q Consensus 249 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L 328 (964)
............|... ....+..+++++.+++++|.+++..| +..+++|+.|++++|++++.
T Consensus 173 ~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~-------------- 234 (384)
T d2omza2 173 NLTTLERLDISSNKVS--DISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-------------- 234 (384)
T ss_dssp TCTTCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--------------
T ss_pred cccccccccccccccc--cccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--------------
Confidence 2333333333333322 12223344444444444444443221 22333444444444433321
Q ss_pred EeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccC
Q 037111 329 SVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNIT 408 (964)
Q Consensus 329 ~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~ 408 (964)
..+..+++|+.|++++|.+++.. .+..+++|+.|++++|++++.
T Consensus 235 ------------~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~---------------------- 278 (384)
T d2omza2 235 ------------GTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNI---------------------- 278 (384)
T ss_dssp ------------GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCC----------------------
T ss_pred ------------chhhcccccchhccccCccCCCC--cccccccCCEeeccCcccCCC----------------------
Confidence 13344455555555555554432 134444555555555444322
Q ss_pred CCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcc
Q 037111 409 GGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMG 488 (964)
Q Consensus 409 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 488 (964)
..+..++.++.++++.|.+.+ ...+..+++++.|++++|++++.. .+..+++|++|++++|++++ ++ .+.
T Consensus 279 ----~~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~ 348 (384)
T d2omza2 279 ----SPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLA 348 (384)
T ss_dssp ----GGGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGG
T ss_pred ----Ccccccccccccccccccccc--ccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHc
Confidence 124455566666666666653 223566667777777777776542 26667777777777777764 22 467
Q ss_pred cccccceecCCccccCccchhhhhccccCCeecccCc
Q 037111 489 YLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHN 525 (964)
Q Consensus 489 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 525 (964)
.+++|++|++++|+|++..| +.++++|+.|+|++|
T Consensus 349 ~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 349 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp GCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 77777777777777776554 677778888888777
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.96 E-value=3.7e-30 Score=279.59 Aligned_cols=259 Identities=26% Similarity=0.454 Sum_probs=197.6
Q ss_pred cceEEEeecccccc--cccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEe
Q 037111 324 SLQYFSVHDNYFIG--SLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILK 401 (964)
Q Consensus 324 ~L~~L~l~~n~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~ 401 (964)
.++.|+|++|.+.+ .+|..+.++++|++|+|++ .|.+++.+|..+.++++|++|+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~-----------------------~N~l~g~iP~~i~~L~~L~~L~ 107 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGG-----------------------INNLVGPIPPAIAKLTQLHYLY 107 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEE-----------------------ETTEESCCCGGGGGCTTCSEEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCcccccccccc-----------------------ccccccccccccccccccchhh
Confidence 45666666666555 3455555555555555543 1444444444455555555555
Q ss_pred ecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCC-CceecccCccc
Q 037111 402 IAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDL-GYLDLSANRFS 480 (964)
Q Consensus 402 L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~ 480 (964)
|++|++.+..+..+..+..|+.+++++|.+.+.+|..+.++++|+.+++++|.+++.+|..+..+..+ +.+++++|+++
T Consensus 108 Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~ 187 (313)
T d1ogqa_ 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp EEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEE
T ss_pred hccccccccccccccchhhhcccccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccc
Confidence 55555555556666777778888888888877788888888888888888888887888877777765 77888888888
Q ss_pred cccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCccccccc
Q 037111 481 KSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFE 560 (964)
Q Consensus 481 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 560 (964)
+..|..+..+..+ .+++++|.+.+.+|..+..+++|+.|++++|.+++.+ ..+..+++|+.|+|++|+|+|.+|..|.
T Consensus 188 ~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~iP~~l~ 265 (313)
T d1ogqa_ 188 GKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLT 265 (313)
T ss_dssp EECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCGGGG
T ss_pred ccccccccccccc-ccccccccccccccccccccccccccccccccccccc-cccccccccccccCccCeecccCChHHh
Confidence 8888777766544 6889999988888888899999999999999998654 4688889999999999999999999999
Q ss_pred ccccceEEEecCCcccccCCCCccCCCCCcccccCCCCccCCCCCCccc
Q 037111 561 NMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPC 609 (964)
Q Consensus 561 ~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~l~~~ 609 (964)
++++|+.|||++|+|+|.+|+...++++....+.+|+.+||.| +++|
T Consensus 266 ~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~p--lp~c 312 (313)
T d1ogqa_ 266 QLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP--LPAC 312 (313)
T ss_dssp GCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT--SSCC
T ss_pred CCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCCC--CCCC
Confidence 9999999999999999999987778888888999999999975 3556
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.96 E-value=7.5e-29 Score=277.78 Aligned_cols=147 Identities=28% Similarity=0.450 Sum_probs=89.6
Q ss_pred CcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccc
Q 037111 415 IGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLH 494 (964)
Q Consensus 415 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 494 (964)
+..+++|+.|++++|++++..+ +..+++|++|++++|.+++.. .+..++.++.++++.|.+++. ..+..+++++
T Consensus 237 l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~ 310 (384)
T d2omza2 237 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLKNLT 310 (384)
T ss_dssp GGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCS
T ss_pred hhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCC--ccccccccccccccccccccc--cccchhcccC
Confidence 4445555555555555553322 445556666666666655332 245556666666666666532 2355666667
Q ss_pred eecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCC
Q 037111 495 YLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573 (964)
Q Consensus 495 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N 573 (964)
.|++++|++++..+ +..+++|+.|++++|+|++ ++ .+.++++|++|+|++|+|++..| +.++++|+.|+|++|
T Consensus 311 ~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 311 YLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred eEECCCCCCCCCcc--cccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 77777777765432 6667777777777777763 33 46777777777777777775544 667777777777776
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.95 E-value=5.5e-27 Score=253.38 Aligned_cols=254 Identities=23% Similarity=0.334 Sum_probs=194.6
Q ss_pred CCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC
Q 037111 45 TTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124 (964)
Q Consensus 45 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 124 (964)
...|.|.+|.|+..+ +..+|.+.++++++|+|++|+|+...+.+|.++++|++|++++|.+....
T Consensus 7 ~c~c~~~~~~C~~~~---------------L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~ 71 (305)
T d1xkua_ 7 RCQCHLRVVQCSDLG---------------LEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKIS 71 (305)
T ss_dssp TCEEETTEEECTTSC---------------CCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBC
T ss_pred CCEecCCEEEecCCC---------------CCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccc
Confidence 344789999997421 33556666789999999999998655568999999999999999999777
Q ss_pred CcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCC--CCCCccccCC
Q 037111 125 PSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLP--GSIPSSIGNL 202 (964)
Q Consensus 125 p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l 202 (964)
|..|..+++|++|++++|+++..++. ....++.|++++|.+.+..+..+.....+..++...|... ...+..+..+
T Consensus 72 ~~~f~~l~~L~~L~l~~n~l~~l~~~--~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l 149 (305)
T d1xkua_ 72 PGAFAPLVKLERLYLSKNQLKELPEK--MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM 149 (305)
T ss_dssp TTTTTTCTTCCEEECCSSCCSBCCSS--CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGC
T ss_pred hhhhhCCCccCEecccCCccCcCccc--hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccc
Confidence 88899999999999999998866543 3467889999999998766666777788888888887654 2334567777
Q ss_pred CCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeec
Q 037111 203 SNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHL 282 (964)
Q Consensus 203 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 282 (964)
++|+++++++|.++. +|.. .+++|++|++++|.+++..+..+..++.++.|++++|.+++..+..+.++++|++|+|
T Consensus 150 ~~L~~l~l~~n~l~~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L 226 (305)
T d1xkua_ 150 KKLSYIRIADTNITT-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 226 (305)
T ss_dssp TTCCEEECCSSCCCS-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEEC
T ss_pred cccCccccccCCccc-cCcc--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeec
Confidence 788888888888774 3333 2567788888888877777777777888888888888887766777777788888888
Q ss_pred ccccccccCCcccccCccccEEEeeCccCcccCCccc
Q 037111 283 YDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNI 319 (964)
Q Consensus 283 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~ 319 (964)
++|+|+ .+|..|..+++|+.|+|++|+|+.+....|
T Consensus 227 ~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f 262 (305)
T d1xkua_ 227 NNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 262 (305)
T ss_dssp CSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred cccccc-ccccccccccCCCEEECCCCccCccChhhc
Confidence 888877 556777777788888887777775544333
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.93 E-value=8.3e-25 Score=236.09 Aligned_cols=195 Identities=24% Similarity=0.341 Sum_probs=95.6
Q ss_pred CcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEe
Q 037111 109 KLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLY 187 (964)
Q Consensus 109 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 187 (964)
.++.+|-++++++ .+|..+. +++++|+|++|+++..++. |.++++|++|++++|.++...|..|.++++|++|+++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 4556666776776 5666542 4566666666666655542 5556666666666666665555556666666666666
Q ss_pred cCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC--CCChhhhhcccccceeecccccccc
Q 037111 188 NNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS--GSIPQEIGNLKLLTDLSLSQNQLRG 265 (964)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~ 265 (964)
+|+++ .+|..+. ..++.|++.+|.+.+..+..+.....+..++...|... ...+..+..+++|+.+++++|.++
T Consensus 88 ~n~l~-~l~~~~~--~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~- 163 (305)
T d1xkua_ 88 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 163 (305)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCccC-cCccchh--hhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-
Confidence 66665 3333222 34455555555555444444444444444444444322 122233444444444444444444
Q ss_pred ccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCc
Q 037111 266 TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 266 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 312 (964)
.+|..+ +++|+.|++++|.+.+..+..|..++.++.|++++|.++
T Consensus 164 ~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~ 208 (305)
T d1xkua_ 164 TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 208 (305)
T ss_dssp SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC
T ss_pred ccCccc--CCccCEEECCCCcCCCCChhHhhcccccccccccccccc
Confidence 222221 234444444444444333334444444444444444333
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.9e-25 Score=238.28 Aligned_cols=213 Identities=26% Similarity=0.284 Sum_probs=121.4
Q ss_pred CCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEcc-ccccCCcccc-cCC
Q 037111 76 DQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMF-VNHLNGSIPE-IGH 153 (964)
Q Consensus 76 ~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~-~n~l~~~~~~-~~~ 153 (964)
..+|...++.+++|+|++|+|++..+.+|.++++|++|++++|.+.+..+..+..+..++.++.. .|.++...+. +..
T Consensus 24 ~~iP~~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 103 (284)
T d1ozna_ 24 QAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHG 103 (284)
T ss_dssp SSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTT
T ss_pred CccCCCCCCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcc
Confidence 35566666788888888888886555678888888888888888886666666666666666553 4444444332 555
Q ss_pred CCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceee
Q 037111 154 LSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLE 233 (964)
Q Consensus 154 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 233 (964)
+++|++|++++|.+....+..++.+++|+.+++++|++++..+..|..+++|++|++++|++++..+..|.++++|++++
T Consensus 104 l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~ 183 (284)
T d1ozna_ 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (284)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred cccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhh
Confidence 55566666665555544445555555555555555555544444454555555555555555544444444444444444
Q ss_pred ccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 234 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
+++|++++..|..|..+++|++|++++|++.+..+..|..+++|++|+|++|++.
T Consensus 184 l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred hhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 4444444444444444444444444444444433344444444444444444443
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.6e-24 Score=229.38 Aligned_cols=205 Identities=20% Similarity=0.178 Sum_probs=107.0
Q ss_pred ccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEee-cccccccccccccCCCcCCeeec
Q 037111 276 SLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVH-DNYFIGSLPKTLRNCTSLERVRL 354 (964)
Q Consensus 276 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~-~n~l~~~~p~~l~~l~~L~~L~L 354 (964)
++++|+|++|+|+...+..|.++++|++|++++|++....+..+.....+..+... .|.+....+..|+++++|+.|++
T Consensus 33 ~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l 112 (284)
T d1ozna_ 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (284)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEec
Confidence 34555555555544333445555555555555555554444444444444444332 22333334555666666666666
Q ss_pred CCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCccccc
Q 037111 355 EKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGK 434 (964)
Q Consensus 355 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 434 (964)
++|.+.......+...++|+.+++++|+++++.+..|..+++|+.|++++|+++...+.+|.++++|+++++++|++++.
T Consensus 113 ~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i 192 (284)
T d1ozna_ 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (284)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhcccccc
Confidence 66666555555555566666666666666554444444445555555555555444445555555555555555555555
Q ss_pred CCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccc
Q 037111 435 VPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS 480 (964)
Q Consensus 435 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 480 (964)
.|..|..+++|++|++++|.+.+..+..|+.+++|++|+|++|.+.
T Consensus 193 ~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 5555555555555555555555444455555555555555555543
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.6e-23 Score=219.04 Aligned_cols=177 Identities=27% Similarity=0.274 Sum_probs=91.3
Q ss_pred CcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEec
Q 037111 109 KLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYN 188 (964)
Q Consensus 109 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 188 (964)
+|++|+|++|.|++..+..|..+++|++|+|++|+++. +|.++.+++|++|+|++|+++ .++..+.++++|++|++++
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~ 109 (266)
T d1p9ag_ 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109 (266)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCS
T ss_pred CCCEEECcCCcCCCcCHHHhhccccccccccccccccc-ccccccccccccccccccccc-ccccccccccccccccccc
Confidence 34444444444443333334444444444444444432 233444555555555555555 2344555555555666555
Q ss_pred CCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccC
Q 037111 189 NSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVP 268 (964)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 268 (964)
|.+.+..+..+..+.++++|++++|.++...+..+..+++|+.|++++|++++..+..|..+++|++|+|++|+|+ .+|
T Consensus 110 ~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp 188 (266)
T d1p9ag_ 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188 (266)
T ss_dssp SCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred cccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccC
Confidence 5555444455555555555555555555554555555555555555555555554555555555555555555555 445
Q ss_pred CcccCccccceeeccccccc
Q 037111 269 SSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 269 ~~l~~l~~L~~L~L~~N~l~ 288 (964)
..+..+++|+.|+|++|++.
T Consensus 189 ~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 189 KGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TTTTTTCCCSEEECCSCCBC
T ss_pred hhHCCCCCCCEEEecCCCCC
Confidence 44545555555555555443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.7e-23 Score=218.88 Aligned_cols=203 Identities=26% Similarity=0.239 Sum_probs=180.5
Q ss_pred eCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcc
Q 037111 55 CNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134 (964)
Q Consensus 55 C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 134 (964)
|....+...++.++++++ .+|-+..+++++|||++|+|++..+..|.++++|++|+|++|+|+ .+| .++.+++|
T Consensus 6 ~~~~~~~~~v~C~~~~L~----~iP~~lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L 79 (266)
T d1p9ag_ 6 VSKVASHLEVNCDKRNLT----ALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVL 79 (266)
T ss_dssp EECSTTCCEEECTTSCCS----SCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTC
T ss_pred EcccCCCeEEEccCCCCC----eeCcCcCcCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-cccccccc
Confidence 444444455677777766 345455678999999999999877788999999999999999998 555 36889999
Q ss_pred cEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhccccc
Q 037111 135 EVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNH 214 (964)
Q Consensus 135 ~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 214 (964)
++|+|++|++++..+.+..+++|+.|++++|.+.+..+..+..+.++++|++++|.++...+..+..+++|++|++++|+
T Consensus 80 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~ 159 (266)
T d1p9ag_ 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (266)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred cccccccccccccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccc
Confidence 99999999999888889999999999999999998888899999999999999999998778888899999999999999
Q ss_pred ccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccc
Q 037111 215 LRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 215 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 264 (964)
+++..+..|..+++|++|+|++|+|+ .+|+.+..+++|+.|+|++|.+.
T Consensus 160 l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 99998899999999999999999999 78888899999999999999876
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.85 E-value=8.7e-22 Score=195.82 Aligned_cols=170 Identities=17% Similarity=0.137 Sum_probs=121.1
Q ss_pred cccceeecCCceeEEEEEeCCCCeEEEEEeccccC----------------chhhHHHHHHHHHHHhCCCCCceeeEEee
Q 037111 692 DESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTG----------------ETTHQKEFLSEIKALTGVRHRNIVKFYGF 755 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 755 (964)
.+.+.||+|+||+||+|+.++|++||||+++.... ..........|+..+.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 45789999999999999988899999998753110 01112345568888999999999988876
Q ss_pred eecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEec
Q 037111 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSD 835 (964)
Q Consensus 756 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~D 835 (964)
.. .++||||++++.+.+ ++.....+++.|+++|++|||++ +|+||||||+|||++++ .++++|
T Consensus 83 ~~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~liD 145 (191)
T d1zara2 83 EG----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWIID 145 (191)
T ss_dssp ET----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEECC
T ss_pred cC----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEEE
Confidence 42 379999998865443 33344567999999999999999 99999999999999865 589999
Q ss_pred cCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHH
Q 037111 836 FGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVL 881 (964)
Q Consensus 836 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvl 881 (964)
||.|.....+.... ....+... -.+ +..+.|..++|+||..--
T Consensus 146 FG~a~~~~~~~~~~-~l~rd~~~-~~~-~f~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 146 FPQSVEVGEEGWRE-ILERDVRN-IIT-YFSRTYRTEKDINSAIDR 188 (191)
T ss_dssp CTTCEETTSTTHHH-HHHHHHHH-HHH-HHHHHHCCCCCHHHHHHH
T ss_pred CCCcccCCCCCcHH-HHHHHHHH-HHH-HHcCCCCCcccHHHHHHH
Confidence 99997654332110 00000000 011 224568889999996543
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.83 E-value=4.1e-19 Score=195.02 Aligned_cols=303 Identities=27% Similarity=0.324 Sum_probs=168.9
Q ss_pred ceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCC
Q 037111 85 HLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDG 164 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~ 164 (964)
++++|||++|+++ .+|+. +++|++|+|++|+|+ .+|..+ .+|++|++++|+++.. +.+. +.|++|++++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~~l-~~lp--~~L~~L~L~~ 107 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLKAL-SDLP--PLLEYLGVSN 107 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCSCC-CSCC--TTCCEEECCS
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccchh-hhhc--cccccccccc
Confidence 5677788888876 46653 457788888888887 667653 4677777777777633 2221 3578888888
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCCh
Q 037111 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244 (964)
Q Consensus 165 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 244 (964)
|.++ .+|. ++.+++|++|++++|.+.. .|... ..+..+.+..+... ....+..++.++.|++++|.+... +
T Consensus 108 n~l~-~lp~-~~~l~~L~~L~l~~~~~~~-~~~~~---~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~-~ 178 (353)
T d1jl5a_ 108 NQLE-KLPE-LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKL-P 178 (353)
T ss_dssp SCCS-SCCC-CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSC-C
T ss_pred cccc-cccc-hhhhccceeeccccccccc-ccccc---ccccchhhcccccc--ccccccccccceeccccccccccc-c
Confidence 8887 4453 5677888888888887773 33333 34455555555443 234566677777888887777632 2
Q ss_pred hhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCc
Q 037111 245 QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS 324 (964)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 324 (964)
. .....+.+..+.+.+. .++ .+..++.|+.+++++|... .++. ...++..+.+.+|.+..... ....
T Consensus 179 ~---~~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~-~~~~---~~~~l~~~~~~~~~~~~~~~----~~~~ 245 (353)
T d1jl5a_ 179 D---LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK-TLPD---LPPSLEALNVRDNYLTDLPE----LPQS 245 (353)
T ss_dssp C---CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCS-SCCS---CCTTCCEEECCSSCCSCCCC----CCTT
T ss_pred c---cccccccccccccccc-ccc-ccccccccccccccccccc-cccc---cccccccccccccccccccc----cccc
Confidence 1 1233455566655555 333 3556777777777777665 2332 23456666777766653211 1223
Q ss_pred ceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecc
Q 037111 325 LQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAG 404 (964)
Q Consensus 325 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~ 404 (964)
+...++..+.+.+. ..+ .......++..+.+.+.. ..+++|++|+|++
T Consensus 246 l~~~~~~~~~~~~l-----~~l-----------------------~~~~~~~~~~~~~~~~~~----~~~~~L~~L~Ls~ 293 (353)
T d1jl5a_ 246 LTFLDVSENIFSGL-----SEL-----------------------PPNLYYLNASSNEIRSLC----DLPPSLEELNVSN 293 (353)
T ss_dssp CCEEECCSSCCSEE-----SCC-----------------------CTTCCEEECCSSCCSEEC----CCCTTCCEEECCS
T ss_pred cccccccccccccc-----ccc-----------------------cchhcccccccCcccccc----ccCCCCCEEECCC
Confidence 34444433332211 001 011223333333333221 1234455555555
Q ss_pred cccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCch
Q 037111 405 NNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPP 461 (964)
Q Consensus 405 n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 461 (964)
|+|+ .+|.. +++|+.|+|++|+|+ .+|.. +++|++|+|++|+|+ .+|.
T Consensus 294 N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~ 341 (353)
T d1jl5a_ 294 NKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPD 341 (353)
T ss_dssp SCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred CccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCc
Confidence 5554 23322 345666666666665 34432 345666777777666 4443
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.82 E-value=4.4e-19 Score=194.81 Aligned_cols=180 Identities=29% Similarity=0.319 Sum_probs=110.6
Q ss_pred CCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEe
Q 037111 108 TKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLY 187 (964)
Q Consensus 108 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 187 (964)
.+|++|||++|+++ .+|+. +++|++|+|++|+++.. |. .+.+|+.|++++|+++ .++.. .+.|++|+++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~~l-p~--~~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLTEL-PE--LPQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS 106 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCSSC-CC--CCTTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCccc-cc--chhhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence 46889999999998 67863 46788888888888844 43 2457888888888877 33321 1357888888
Q ss_pred cCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecccccccccc
Q 037111 188 NNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTV 267 (964)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 267 (964)
+|.++ .+|. ++.+++|++|++++|.+.... . ....+..+.+.++.... +..+..++.++.|.+++|.+.. .
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~-~---~~~~l~~l~~~~~~~~~--~~~l~~l~~l~~L~l~~n~~~~-~ 177 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLP-D---LPPSLEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSLKK-L 177 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCSS--CCCCTTCTTCCEEECCSSCCSS-C
T ss_pred ccccc-cccc-hhhhccceeeccccccccccc-c---ccccccchhhccccccc--cccccccccceecccccccccc-c
Confidence 88877 4553 567777888888777776432 2 23445556665555442 2345566667777777776652 2
Q ss_pred CCcccCccccceeecccccccccCCcccccCccccEEEeeCccCc
Q 037111 268 PSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 268 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 312 (964)
+... ...+.+..+++.+. .++ .+..++.|+.+++++|...
T Consensus 178 ~~~~---~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~ 217 (353)
T d1jl5a_ 178 PDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK 217 (353)
T ss_dssp CCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCS
T ss_pred cccc---cccccccccccccc-ccc-ccccccccccccccccccc
Confidence 2211 22344455444443 222 2445566666666665544
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=2.3e-22 Score=229.96 Aligned_cols=109 Identities=24% Similarity=0.248 Sum_probs=56.6
Q ss_pred CCCEEEcCCCCCCCCC-CCCCCCCCCCcEEEEecCCCCC----CCCccccCCCCcchhhcccccccCCc----ccccc-C
Q 037111 156 SLKNLALDGNHLDGPI-PVSIGNLSSLVGLYLYNNSLPG----SIPSSIGNLSNLVYLFLKKNHLRGPI----PSSFG-Y 225 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~-~ 225 (964)
+|+.||+++|++++.. ..-+..+++++.|+|++|.++. .++..+..+++|++|+|++|.|+... ...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 4667777777776421 2233445666777777776652 12233455566666666666654211 11111 1
Q ss_pred ccccceeeccccccCCC----Chhhhhcccccceeeccccccc
Q 037111 226 LRKLTKLELSNNQLSGS----IPQEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 226 l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 264 (964)
..+|++|+|++|++++. ++..+..+++|++|+|++|.++
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 23566666666665532 2334444555666666666554
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.78 E-value=1.7e-19 Score=184.68 Aligned_cols=208 Identities=24% Similarity=0.355 Sum_probs=124.0
Q ss_pred CcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEc
Q 037111 83 FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162 (964)
Q Consensus 83 ~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 162 (964)
+.++..++++.+++++.+ .+..|.+|+.|++++|+|+ .++ .+..+++|++|++++|++++..| +..+++|+.+++
T Consensus 18 l~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~ 92 (227)
T d1h6ua2 18 LANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELEL 92 (227)
T ss_dssp HHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEEC
T ss_pred HHHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCC-cch-hHhcCCCCcEeecCCceeecccc-cccccccccccc
Confidence 344455667777776543 4566777777777777776 343 46677777777777777765443 666677777777
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 163 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
++|.++. + ..++.+++|++++++++...+. ..+...+.++.+.++.+.+.... .+...++|++|++++|.+++.
T Consensus 93 ~~n~~~~-i-~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~ 166 (227)
T d1h6ua2 93 SGNPLKN-V-SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDL 166 (227)
T ss_dssp CSCCCSC-C-GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCC
T ss_pred ccccccc-c-cccccccccccccccccccccc--chhccccchhhhhchhhhhchhh--hhccccccccccccccccccc
Confidence 7776663 2 2466667777777766666533 23445556666666666655332 244556666666666666533
Q ss_pred ChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEee
Q 037111 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVG 307 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 307 (964)
. .++++++|+.|+|++|++++ ++ .+.++++|++|+|++|++++. + .++++++|+.|+++
T Consensus 167 ~--~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 167 T--PLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDV-S-PLANTSNLFIVTLT 225 (227)
T ss_dssp G--GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBC-G-GGTTCTTCCEEEEE
T ss_pred h--hhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCC-c-ccccCCCCCEEEee
Confidence 2 25556666666666666653 22 255566666666666666532 2 25555566666554
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=5.7e-22 Score=226.62 Aligned_cols=110 Identities=25% Similarity=0.253 Sum_probs=70.5
Q ss_pred CCcEEEEecCCCCCCC-CccccCCCCcchhhcccccccC----CccccccCccccceeeccccccCCCChhhhhc-----
Q 037111 180 SLVGLYLYNNSLPGSI-PSSIGNLSNLVYLFLKKNHLRG----PIPSSFGYLRKLTKLELSNNQLSGSIPQEIGN----- 249 (964)
Q Consensus 180 ~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----- 249 (964)
+|+.||+++|++++.. ..-+..+++++.|+|++|.++. .+...+..+++|++|||++|.|+......+..
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 5788888888887421 2334556777888888887763 23344567777888888888775321122221
Q ss_pred ccccceeeccccccccc----cCCcccCccccceeecccccccc
Q 037111 250 LKLLTDLSLSQNQLRGT----VPSSLSNLSSLEILHLYDNQLSG 289 (964)
Q Consensus 250 l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~ 289 (964)
..+|++|+|++|++++. ++..+..+++|++|+|++|+++.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 24677788877777642 34456667777777777777764
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=3.3e-19 Score=184.67 Aligned_cols=207 Identities=19% Similarity=0.135 Sum_probs=133.2
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc-ccCCCCcccEEEccc-cccCCcccc-cCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS-EIGLLTNLEVLHMFV-NHLNGSIPE-IGH 153 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~l~~-n~l~~~~~~-~~~ 153 (964)
.+|-+.++++++|||++|.|+...+..|.++++|++|+|++|.+...+|. .|..++++++|.+.. |.+....+. +..
T Consensus 22 ~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~ 101 (242)
T d1xwdc1 22 EIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQN 101 (242)
T ss_dssp SCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEEC
T ss_pred CcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccc
Confidence 45555667889999999998865555788899999999999888765543 567788888887653 566655554 677
Q ss_pred CCCCCEEEcCCCCCCCCCCC-CCCCCCCCcEEEEecCCCCCCCCccccCCC-CcchhhcccccccCCccccccCccccce
Q 037111 154 LSSLKNLALDGNHLDGPIPV-SIGNLSSLVGLYLYNNSLPGSIPSSIGNLS-NLVYLFLKKNHLRGPIPSSFGYLRKLTK 231 (964)
Q Consensus 154 l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 231 (964)
+++|++|++++|+++...+. .+..++.+..+..+++.+....+..|.+++ .++.|++++|+++.+.+..|.....++.
T Consensus 102 l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~ 181 (242)
T d1xwdc1 102 LPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDEL 181 (242)
T ss_dssp CTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEE
T ss_pred cccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccccccchhhhcc
Confidence 77788888877777643222 234455566666666666654455555553 5666777777777544444433333334
Q ss_pred eeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecc
Q 037111 232 LELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLY 283 (964)
Q Consensus 232 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 283 (964)
+++++|+++...+..|.++++|++|+|++|+|+...+..|.++++|+.|++.
T Consensus 182 ~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~ 233 (242)
T d1xwdc1 182 NLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 233 (242)
T ss_dssp ECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEE
T ss_pred ccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCC
Confidence 4556666664444456666777777777777764434456666666665553
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.77 E-value=3.9e-19 Score=181.93 Aligned_cols=210 Identities=23% Similarity=0.319 Sum_probs=163.1
Q ss_pred cCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEE
Q 037111 105 GNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGL 184 (964)
Q Consensus 105 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 184 (964)
..|+++..++++.+.+++.+ .+..+.+|++|++++|.++.. +.+..+++|++|++++|++++..| +..+++|++|
T Consensus 16 ~~l~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l 90 (227)
T d1h6ua2 16 PALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITEL 90 (227)
T ss_dssp HHHHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEE
T ss_pred HHHHHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCcc-hhHhcCCCCcEeecCCceeecccc--cccccccccc
Confidence 34566677788888888654 456788999999999998864 678899999999999999986543 8889999999
Q ss_pred EEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccc
Q 037111 185 YLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 264 (964)
++++|.++. + ..+..+++|++++++++...+. ..+...+.++.+.++++.+.... .+..+++|++|++++|.++
T Consensus 91 ~~~~n~~~~-i-~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~ 164 (227)
T d1h6ua2 91 ELSGNPLKN-V-SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVS 164 (227)
T ss_dssp ECCSCCCSC-C-GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCC
T ss_pred ccccccccc-c-cccccccccccccccccccccc--chhccccchhhhhchhhhhchhh--hhccccccccccccccccc
Confidence 999998883 4 3588889999999999888754 34667788888999888887543 3677888999999999887
Q ss_pred cccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEee
Q 037111 265 GTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVH 331 (964)
Q Consensus 265 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~ 331 (964)
+. ..+.++++|++|+|++|++++ ++ .++++++|++|+|++|++++..| +..+++|++|+++
T Consensus 165 ~~--~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 165 DL--TPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp CC--GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred cc--hhhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 43 237788889999999888875 33 37888888888888888886532 4555666666554
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.6e-18 Score=179.41 Aligned_cols=221 Identities=14% Similarity=0.087 Sum_probs=120.9
Q ss_pred eEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeeccc
Q 037111 326 QYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGN 405 (964)
Q Consensus 326 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n 405 (964)
+.++.++..++ .+|..+. +++++|+|++|+|+.+....|..+++|++|++++|.+....
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i------------------ 69 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI------------------ 69 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEE------------------
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhcccccccee------------------
Confidence 45555555554 3333332 34556666666665555555555666666666655554322
Q ss_pred ccCCCCCCCCcccccCcEEeccC-CcccccCCccccccCCcceeecccccccCCCc-hhhhccCCCCceecccCcccccc
Q 037111 406 NITGGIPPEIGNATQLHELDFSS-NHLVGKVPLELANLTSLNDLILNGNQLSGGIP-PELGLLTDLGYLDLSANRFSKSI 483 (964)
Q Consensus 406 ~i~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~ 483 (964)
.+..|.+++.++++++.. |.+....+..|.++++|++|++++|.+....+ ..+..+..+..+..+++.+....
T Consensus 70 -----~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~ 144 (242)
T d1xwdc1 70 -----EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE 144 (242)
T ss_dssp -----CSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEEC
T ss_pred -----eccccccccccccccccccccccccccccccccccccccccchhhhccccccccccccccccccccccccccccc
Confidence 123344455555554432 34444444555555555555555555543222 12223344444455555555555
Q ss_pred CCCccccc-ccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCccccccccc
Q 037111 484 PGNMGYLL-KLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENM 562 (964)
Q Consensus 484 ~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 562 (964)
+..|.+++ .++.|++++|+++...+..+.....++.+++++|+|+...+..|.++++|+.|+|++|+|+...+..|.++
T Consensus 145 ~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l 224 (242)
T d1xwdc1 145 RNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENL 224 (242)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTC
T ss_pred ccccccccccceeeecccccccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCC
Confidence 55555543 56777777777765444444433333344567777774444557777777777777777776556667777
Q ss_pred ccceEEEecC
Q 037111 563 HGLLSIDISY 572 (964)
Q Consensus 563 ~~L~~l~ls~ 572 (964)
+.|+.+++.+
T Consensus 225 ~~L~~l~~~~ 234 (242)
T d1xwdc1 225 KKLRARSTYN 234 (242)
T ss_dssp CEEESSSEES
T ss_pred cccccCcCCC
Confidence 7777766643
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.75 E-value=5.5e-19 Score=178.11 Aligned_cols=181 Identities=24% Similarity=0.352 Sum_probs=86.3
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHL 167 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l 167 (964)
..++..+.+++.++. ..+.+|++|++++|.+++ ++ .+..+++|++|++++|++++.. .++.+++|++|++++|++
T Consensus 28 ~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~n~i 102 (210)
T d1h6ta2 28 KDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIK-PLANLKNLGWLFLDENKV 102 (210)
T ss_dssp HHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCC
T ss_pred HHHhCcCccCCccCH--HHhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccCcc-ccccCccccccccccccc
Confidence 344555555544332 245556666666666552 22 2445555555555555555432 244455555555555555
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhh
Q 037111 168 DGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI 247 (964)
Q Consensus 168 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 247 (964)
++ +| .++++++|+.|++++|.+.. + ..+. .+++++.+++++|.+++. ..+
T Consensus 103 ~~-l~-~l~~l~~L~~L~l~~~~~~~-~-~~l~------------------------~l~~l~~l~~~~n~l~~~--~~~ 152 (210)
T d1h6ta2 103 KD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLV------------------------HLPQLESLYLGNNKITDI--TVL 152 (210)
T ss_dssp CC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGG------------------------GCTTCCEEECCSSCCCCC--GGG
T ss_pred cc-cc-cccccccccccccccccccc-c-cccc------------------------cccccccccccccccccc--ccc
Confidence 42 22 34445555555555554431 1 2344 444444555554444422 234
Q ss_pred hcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEee
Q 037111 248 GNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVG 307 (964)
Q Consensus 248 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 307 (964)
..+++|+++++++|++++ ++ .+.++++|++|+|++|+|+. +| .+.++++|+.|+|+
T Consensus 153 ~~l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 153 SRLTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp GGCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred cccccccccccccccccc-cc-cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence 444555555555555543 22 14455555555555555542 22 34555555555554
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.75 E-value=1.3e-18 Score=172.71 Aligned_cols=152 Identities=25% Similarity=0.254 Sum_probs=93.6
Q ss_pred cccEEEccccccCCccc--ccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhc
Q 037111 133 NLEVLHMFVNHLNGSIP--EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFL 210 (964)
Q Consensus 133 ~L~~L~l~~n~l~~~~~--~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 210 (964)
++++|+|++|++++.++ .|..+++|++|+|++|++.+..+..+..+++|++|+|++|+|+...|..|.++++|++|+|
T Consensus 30 ~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L 109 (192)
T d1w8aa_ 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCccccccc
Confidence 34444444444443222 2455666666666666666666666777777777777777777666666777777777777
Q ss_pred ccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 211 KKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 211 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
++|+|+++.+..|..+++|++|+|++|.+..... ...-...++.+.+..|.++...|.. +..++.++|+.|.+.
T Consensus 110 ~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l~~~~l~~~~~~c~~p~~---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAARCGAPSK---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG-GHHHHHHHHHHCCSGGGCBBCSSTT---TTTSBGGGSCTTTCC
T ss_pred CCccccccCHHHhcCCcccccccccccccccccc-hHHHhhhhhhhcccCCCeEeCCChh---hcCCEeeecCHhhCc
Confidence 7777776666677777777777777777764322 1122234555666666666555543 344566677777665
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.75 E-value=1.6e-18 Score=172.09 Aligned_cols=174 Identities=24% Similarity=0.279 Sum_probs=124.4
Q ss_pred ceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCC-CccccCCCCcCeeecccCCccCcCCc
Q 037111 48 CTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNI-PSPIGNLTKLKFLNLSSNHFSGKIPS 126 (964)
Q Consensus 48 C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~ 126 (964)
|.|..|.|+. ++++ .+|-+.++++++|+|++|+|++.+ +..|.++++|++|+|++|.+.+..+.
T Consensus 8 C~~~~v~Cs~-----------~~L~----~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~ 72 (192)
T d1w8aa_ 8 CEGTTVDCTG-----------RGLK----EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPN 72 (192)
T ss_dssp EETTEEECTT-----------SCCS----SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTT
T ss_pred EcCCEEEEeC-----------CCcC----ccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccc
Confidence 6677777753 3332 455566688999999999998755 45678899999999999999888888
Q ss_pred ccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCc
Q 037111 127 EIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL 205 (964)
Q Consensus 127 ~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 205 (964)
.+..+++|++|+|++|+++..++. |..+++|++|+|++|+|++..|..|..+++|++|+|++|.+....+ ...-...+
T Consensus 73 ~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l 151 (192)
T d1w8aa_ 73 AFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAEWL 151 (192)
T ss_dssp TTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG-GHHHHHHH
T ss_pred ccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccc-hHHHhhhh
Confidence 888888888888888888877765 7788888888888888887777778888888888888888764322 11112235
Q ss_pred chhhcccccccCCccccccCccccceeeccccccC
Q 037111 206 VYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 206 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
+.+.+..|.++...|.. +..++.++|+.|.+.
T Consensus 152 ~~~~l~~~~~~c~~p~~---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 152 RKKSLNGGAARCGAPSK---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp HHHCCSGGGCBBCSSTT---TTTSBGGGSCTTTCC
T ss_pred hhhcccCCCeEeCCChh---hcCCEeeecCHhhCc
Confidence 55666666666544433 334455566666554
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.74 E-value=2e-18 Score=172.39 Aligned_cols=181 Identities=25% Similarity=0.403 Sum_probs=95.0
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcC
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALD 163 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~ 163 (964)
+++..++++.+.+++.++ ...+.+|++|++++|+++ .+ +.++.+++|++|++++|++++..| ++.+++|++|+++
T Consensus 18 ~~~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~-~l-~~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~ 92 (199)
T d2omxa2 18 AEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SI-DGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMN 92 (199)
T ss_dssp HHHHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCC-CC-TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECC
T ss_pred HHHHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCC-Cc-cccccCCCcCcCccccccccCccc-ccCCccccccccc
Confidence 344455566666665432 345666777777777766 23 235556666666666666655433 5566666666666
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCC
Q 037111 164 GNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243 (964)
Q Consensus 164 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 243 (964)
+|.+.. ++ .++++++|++|++++|.+... ..+..+++|++|++++|++... ..+..+++|++|++++|++++.
T Consensus 93 ~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~~--~~l~~~~~L~~L~l~~n~l~~l- 165 (199)
T d2omxa2 93 NNQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDL- 165 (199)
T ss_dssp SSCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCCC-
T ss_pred cccccc-cc-ccccccccccccccccccccc--cccchhhhhHHhhhhhhhhccc--ccccccccccccccccccccCC-
Confidence 666553 22 255566666666665555532 2344555555555555555422 2344555555555555555532
Q ss_pred hhhhhcccccceeeccccccccccCCcccCccccce
Q 037111 244 PQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEI 279 (964)
Q Consensus 244 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 279 (964)
+ .++++++|++|++++|++++ ++ .++.+++|++
T Consensus 166 ~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~ 198 (199)
T d2omxa2 166 K-PLANLTTLERLDISSNKVSD-IS-VLAKLTNLES 198 (199)
T ss_dssp G-GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSE
T ss_pred c-cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCc
Confidence 1 24455555555555555542 22 2444444443
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.73 E-value=1.7e-18 Score=173.00 Aligned_cols=184 Identities=28% Similarity=0.412 Sum_probs=131.5
Q ss_pred CCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEE
Q 037111 106 NLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLY 185 (964)
Q Consensus 106 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 185 (964)
++.+...+.++.+.+++.++. ..+.+|++|++++|.++. ++.+..+++|++|+|++|++++..| ++++++|++|+
T Consensus 16 ~l~~~i~~~l~~~~~~~~~~~--~~l~~l~~L~l~~~~i~~-l~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 90 (199)
T d2omxa2 16 ALAEKMKTVLGKTNVTDTVSQ--TDLDQVTTLQADRLGIKS-IDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDIL 90 (199)
T ss_dssp HHHHHHHHHTTCSSTTSEECH--HHHTTCCEEECTTSCCCC-CTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HHHHHHHHHhCCCCCCCccCH--HHhcCCCEEECCCCCCCC-ccccccCCCcCcCccccccccCccc--ccCCccccccc
Confidence 455556677888888765432 457788888888888874 4567778888888888888886433 78888888888
Q ss_pred EecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecccccccc
Q 037111 186 LYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG 265 (964)
Q Consensus 186 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 265 (964)
+++|.+.. ++ .++++++|++|++++|.+... ..+..+++|+.|++++|++.. + +.+..+++|+.|++++|++++
T Consensus 91 l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~ 164 (199)
T d2omxa2 91 MNNNQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTD 164 (199)
T ss_dssp CCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCC
T ss_pred cccccccc-cc-ccccccccccccccccccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccC
Confidence 88888773 33 477788888888888877653 346677788888888887763 3 347777778888888887774
Q ss_pred ccCCcccCccccceeecccccccccCCcccccCccccEE
Q 037111 266 TVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSL 304 (964)
Q Consensus 266 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 304 (964)
. + .+.++++|++|++++|++++ ++ .++.+++|++|
T Consensus 165 l-~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 165 L-K-PLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp C-G-GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred C-c-cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 3 2 36777777777777777764 32 46667776654
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.73 E-value=2.3e-18 Score=173.52 Aligned_cols=165 Identities=27% Similarity=0.447 Sum_probs=126.5
Q ss_pred CCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceee
Q 037111 154 LSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLE 233 (964)
Q Consensus 154 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 233 (964)
+.+|++|++++|.+++. + .+..+++|++|+|++|++++. + .++++++|++|++++|++++ ++ .+..+++|+.|+
T Consensus 45 L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred hcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccccc-cc-cccccccccccc
Confidence 34566666666666532 2 356666777777777777643 2 35667777777777777774 33 477888899999
Q ss_pred ccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc
Q 037111 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 234 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
+++|.+.. + ..+..+++|+.++++.|.+++ +..+..+++|+++++++|++++ ++ .+.++++|+.|++++|+|++
T Consensus 119 l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~Ls~N~i~~ 192 (210)
T d1h6ta2 119 LEHNGISD-I-NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYLSKNHISD 192 (210)
T ss_dssp CTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCB
T ss_pred cccccccc-c-ccccccccccccccccccccc--cccccccccccccccccccccc-cc-cccCCCCCCEEECCCCCCCC
Confidence 99998874 3 468899999999999999984 3457889999999999999985 33 48899999999999999986
Q ss_pred cCCcccccCCcceEEEeec
Q 037111 314 FLPQNICQSGSLQYFSVHD 332 (964)
Q Consensus 314 ~~p~~~~~~~~L~~L~l~~ 332 (964)
. + .+..+++|++|++++
T Consensus 193 l-~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 193 L-R-ALAGLKNLDVLELFS 209 (210)
T ss_dssp C-G-GGTTCTTCSEEEEEE
T ss_pred C-h-hhcCCCCCCEEEccC
Confidence 4 3 589999999999975
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=4.7e-15 Score=141.45 Aligned_cols=126 Identities=21% Similarity=0.165 Sum_probs=64.1
Q ss_pred ccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCee
Q 037111 441 NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSEL 520 (964)
Q Consensus 441 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 520 (964)
+..+|++|+|++|+|+ .++..+..+++|+.|+|++|+|+.. +.|..+++|++|++++|+|+...+..+..+++|+.|
T Consensus 16 n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L 92 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 92 (162)
T ss_dssp CTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccccc
Confidence 3444445555555544 2233334455555555555555432 235555556666666666654444445555666666
Q ss_pred cccCccccCCCC-hhcccccccceeeccCCcCCCcc---cccccccccceEEE
Q 037111 521 DLSHNLLRGEIP-PEICNLESLEKLNLSHNNLSGSI---PTNFENMHGLLSID 569 (964)
Q Consensus 521 ~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~---~~~~~~l~~L~~l~ 569 (964)
++++|+|+.... ..+..+++|+.|++++|+++... +..+..+++|+.||
T Consensus 93 ~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 93 ILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp ECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred eeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 666666553211 24555666666666666664321 12345556666554
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.51 E-value=7.3e-16 Score=168.08 Aligned_cols=186 Identities=21% Similarity=0.306 Sum_probs=122.4
Q ss_pred cCCCccceEeecccccCCCCC----CCCcccccCcEEeccCCcccccCCcc-------------ccccCCcceeeccccc
Q 037111 392 WNCPQLGILKIAGNNITGGIP----PEIGNATQLHELDFSSNHLVGKVPLE-------------LANLTSLNDLILNGNQ 454 (964)
Q Consensus 392 ~~~~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~-------------l~~l~~L~~L~L~~N~ 454 (964)
..+++|+.|+|++|.++.... ..+...++|++|++++|.+....... ....+.|+.+.+++|.
T Consensus 90 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~ 169 (344)
T d2ca6a1 90 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 169 (344)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccc
Confidence 345556666666665553211 12334567777777777764221111 1234678888888888
Q ss_pred ccCC----CchhhhccCCCCceecccCccccc-----cCCCcccccccceecCCccccCcc----chhhhhccccCCeec
Q 037111 455 LSGG----IPPELGLLTDLGYLDLSANRFSKS-----IPGNMGYLLKLHYLNMSSNEFSQE----IPIQLGKLVQLSELD 521 (964)
Q Consensus 455 l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~ 521 (964)
++.. +...+...+.|+.|+|++|.++.. ....+..+++|+.|+|++|.++.. +...+..+++|++|+
T Consensus 170 i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~ 249 (344)
T d2ca6a1 170 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 249 (344)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred ccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhh
Confidence 7633 233455678888899988888642 334567788899999999988643 345567788899999
Q ss_pred ccCccccCCCChhc----cc--ccccceeeccCCcCCCc----cccccc-ccccceEEEecCCcccc
Q 037111 522 LSHNLLRGEIPPEI----CN--LESLEKLNLSHNNLSGS----IPTNFE-NMHGLLSIDISYNELDG 577 (964)
Q Consensus 522 Ls~N~l~~~~~~~~----~~--l~~L~~L~Ls~N~l~~~----~~~~~~-~l~~L~~l~ls~N~l~~ 577 (964)
|++|.|++.....+ .. .+.|++|+|++|+|+.. +...+. +.+.|+.|++++|++..
T Consensus 250 Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 250 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred hhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 99998875433333 22 35789999999998753 233343 56789999999999864
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=5.7e-16 Score=163.51 Aligned_cols=122 Identities=21% Similarity=0.219 Sum_probs=63.0
Q ss_pred eEEeccCCccccCCCccccCC--CCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcc-cc-cCCCCCCCEEEc
Q 037111 87 SYLDLNENQLYGNIPSPIGNL--TKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSI-PE-IGHLSSLKNLAL 162 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-~~-~~~l~~L~~L~L 162 (964)
+.|||+++.+.. +.++.+ ..+..+.++...+...+ .......+|++||++++.+++.. +. +.++++|++|+|
T Consensus 3 ~~lDLs~~~l~~---~~l~~l~~~~~~~lrl~~~~~~~~~-~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L 78 (284)
T d2astb2 3 QTLDLTGKNLHP---DVTGRLLSQGVIAFRCPRSFMDQPL-AEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 78 (284)
T ss_dssp SEEECTTCBCCH---HHHHHHHHTTCSEEECTTCEECSCC-CSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred CEEECCCCCCCc---hHHHHHHhccceEeeccccccccch-hhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccc
Confidence 367777776643 222222 12445555555444222 22334456777777766665432 22 456667777777
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecC-CCCCC-CCccccCCCCcchhhccc
Q 037111 163 DGNHLDGPIPVSIGNLSSLVGLYLYNN-SLPGS-IPSSIGNLSNLVYLFLKK 212 (964)
Q Consensus 163 ~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~ 212 (964)
+++.+++..+..++.+++|++|+++++ .++.. +..-..++++|++|++++
T Consensus 79 ~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~ 130 (284)
T d2astb2 79 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSW 130 (284)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCC
T ss_pred cccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcccccccc
Confidence 776666555556666666666666663 33311 011122344555555554
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.50 E-value=5.1e-16 Score=169.34 Aligned_cols=62 Identities=23% Similarity=0.185 Sum_probs=26.3
Q ss_pred ccCcEEeccCCccccc-----CCccccccCCcceeecccccccCC----CchhhhccCCCCceecccCccc
Q 037111 419 TQLHELDFSSNHLVGK-----VPLELANLTSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRFS 480 (964)
Q Consensus 419 ~~L~~L~Ls~N~l~~~-----~~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 480 (964)
+.|++|+|++|+|... +...+..+++|+.|+|++|.++.. +...+..+++|++|+|++|.|+
T Consensus 186 ~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~ 256 (344)
T d2ca6a1 186 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLS 256 (344)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred hhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccC
Confidence 3445555555544321 122234444555555555544321 1223334444444444444443
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=7.5e-15 Score=140.01 Aligned_cols=127 Identities=20% Similarity=0.198 Sum_probs=67.2
Q ss_pred cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccc
Q 037111 151 IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT 230 (964)
Q Consensus 151 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 230 (964)
+.+..+|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .++ .|..+++|++|++++|+++...+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence 344455566666666665 33444455566666666666665 222 355555666666666666544444445556666
Q ss_pred eeeccccccCCCCh-hhhhcccccceeeccccccccccCC----cccCccccceee
Q 037111 231 KLELSNNQLSGSIP-QEIGNLKLLTDLSLSQNQLRGTVPS----SLSNLSSLEILH 281 (964)
Q Consensus 231 ~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~ 281 (964)
+|++++|+|+.... ..+..+++|++|++++|.++ ..|. .+..+++|++||
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred cceeccccccccccccccccccccchhhcCCCccc-cccchHHHHHHHCCCcCeeC
Confidence 66666666553211 24455555666666666555 2222 244445555544
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.49 E-value=2.7e-14 Score=129.22 Aligned_cols=85 Identities=27% Similarity=0.365 Sum_probs=32.8
Q ss_pred CCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCcc-ccccCccccc
Q 037111 152 GHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIP-SSFGYLRKLT 230 (964)
Q Consensus 152 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~ 230 (964)
+.+++|++|++++|+++ .+|+.++.+++|++|++++|+|++ +| .++++++|++|++++|+|+.... ..+..+++|+
T Consensus 17 ~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~ 93 (124)
T d1dcea3 17 EQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLV 93 (124)
T ss_dssp GGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCC
T ss_pred ccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCccCCCCCchhhcCCCCCC
Confidence 33344444444444443 233334444444444444444432 12 23334444444444444432211 2233344444
Q ss_pred eeecccccc
Q 037111 231 KLELSNNQL 239 (964)
Q Consensus 231 ~L~L~~N~l 239 (964)
.|++++|++
T Consensus 94 ~L~l~~N~i 102 (124)
T d1dcea3 94 LLNLQGNSL 102 (124)
T ss_dssp EEECTTSGG
T ss_pred EEECCCCcC
Confidence 444444443
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.49 E-value=2.1e-14 Score=130.00 Aligned_cols=102 Identities=28% Similarity=0.334 Sum_probs=60.5
Q ss_pred eEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCC
Q 037111 87 SYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNH 166 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~ 166 (964)
++|||++|+++ .+| .++.+++|++|+|++|.|+ .+|+.++.+++|++|++++|.+++. |.++.+++|++|++++|+
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNR 76 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSC
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-CccccccccCeEECCCCc
Confidence 45777777776 333 3677777777777777776 5666666666666666666666643 345556666666666666
Q ss_pred CCCCCC-CCCCCCCCCcEEEEecCCCC
Q 037111 167 LDGPIP-VSIGNLSSLVGLYLYNNSLP 192 (964)
Q Consensus 167 l~~~~p-~~~~~l~~L~~L~L~~N~l~ 192 (964)
++.... ..++.+++|++|++++|+++
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 553221 23445555555555555544
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=4.1e-15 Score=156.79 Aligned_cols=181 Identities=17% Similarity=0.178 Sum_probs=80.4
Q ss_pred ccccceeeccccccccc-CCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecc-ccccc-ccccccCCCcCC
Q 037111 274 LSSLEILHLYDNQLSGH-IPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDN-YFIGS-LPKTLRNCTSLE 350 (964)
Q Consensus 274 l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n-~l~~~-~p~~l~~l~~L~ 350 (964)
..+|++||++++.++.. ++..+..+++|++|+++++.+++..+..+..+++|++|+++++ .++.. +...+.++++|+
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~ 124 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 124 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcc
Confidence 34566666666555432 2333455555666666655555444444444444444444442 22211 111223455555
Q ss_pred eeecCCCc-cccccC-ccc-CCCCCCcEEEccCC--eeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEe
Q 037111 351 RVRLEKNQ-LIGNIS-DDF-GIYPNLKLFDLSYN--KFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELD 425 (964)
Q Consensus 351 ~L~L~~N~-l~~~~~-~~~-~~l~~L~~L~Ls~N--~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 425 (964)
+|+++++. ++.... ..+ ...++|+.|+++++ .++..... ..+.++++|++|+
T Consensus 125 ~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~-----------------------~l~~~~~~L~~L~ 181 (284)
T d2astb2 125 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLS-----------------------TLVRRCPNLVHLD 181 (284)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHH-----------------------HHHHHCTTCSEEE
T ss_pred ccccccccccccccchhhhcccccccchhhhccccccccccccc-----------------------ccccccccccccc
Confidence 55555532 221110 111 11244555555442 12211111 1112344555555
Q ss_pred ccCC-cccccCCccccccCCcceeecccc-cccCCCchhhhccCCCCceecccC
Q 037111 426 FSSN-HLVGKVPLELANLTSLNDLILNGN-QLSGGIPPELGLLTDLGYLDLSAN 477 (964)
Q Consensus 426 Ls~N-~l~~~~~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N 477 (964)
+++| .+++.....+..+++|++|+|++| .+++.....++.+++|++|+++++
T Consensus 182 L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 182 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 5543 244444444555555555555553 444444444555555555555554
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.38 E-value=1.3e-14 Score=143.49 Aligned_cols=130 Identities=26% Similarity=0.287 Sum_probs=84.0
Q ss_pred CCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhcc
Q 037111 435 VPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKL 514 (964)
Q Consensus 435 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 514 (964)
++..+..+++|++|+|++|+|+. ++ .+..+++|++|+|++|+|+. +|..+..+++|++|++++|+|+.. ..+..+
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l 114 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIASL--SGIEKL 114 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEECSEEECCCH--HHHHHH
T ss_pred hhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhccccccc-cccccccccccccccccccccccc--cccccc
Confidence 44556677777777777777763 33 46777777777777777753 444444556677777777777643 246677
Q ss_pred ccCCeecccCccccCCCC-hhcccccccceeeccCCcCCCccccc----------ccccccceEEE
Q 037111 515 VQLSELDLSHNLLRGEIP-PEICNLESLEKLNLSHNNLSGSIPTN----------FENMHGLLSID 569 (964)
Q Consensus 515 ~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~----------~~~l~~L~~l~ 569 (964)
++|+.|+|++|+|+.... ..+..+++|+.|+|++|++....+.. +..+++|+.||
T Consensus 115 ~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred ccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 777777777777764221 35677777777777777776443332 44566666665
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=9.8e-13 Score=124.20 Aligned_cols=138 Identities=17% Similarity=0.120 Sum_probs=84.8
Q ss_pred CCceecccCccccccCCCcccccccceecCCcc-ccCccchhhhhccccCCeecccCccccCCCChhcccccccceeecc
Q 037111 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSN-EFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS 547 (964)
Q Consensus 469 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 547 (964)
.+.++.+++.+. ..|..+..+++|++|++++| .|+.+.+.+|..+++|+.|+|++|+|+...+.+|..+++|++|+|+
T Consensus 10 ~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 344555655554 34555666677777777655 4666666677777777777777777776667777777777777777
Q ss_pred CCcCCCcccccccccccceEEEecCCcccccCC--CCccCCCCCcccccCCCCccCCCCCCcc
Q 037111 548 HNNLSGSIPTNFENMHGLLSIDISYNELDGPIP--SIEAFRHAPVEALQGNKGLCGEVSGLQP 608 (964)
Q Consensus 548 ~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~--~~~~~~~~~~~~~~~n~~~c~~~~~l~~ 608 (964)
+|+|+...+..|..+ .|+.|+|++|+|.+... +...+.......+..+...|..+..+.+
T Consensus 89 ~N~l~~l~~~~~~~~-~l~~L~L~~Np~~C~C~~~~l~~~~~~~~~~~~~~~~~C~~p~~l~~ 150 (156)
T d2ifga3 89 FNALESLSWKTVQGL-SLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAH 150 (156)
T ss_dssp SSCCSCCCSTTTCSC-CCCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSSCSSC
T ss_pred CCCCcccChhhhccc-cccccccCCCcccCCchHHHHHHHHHhccCccCcCCcEECcChHHCc
Confidence 777775555555544 57788888888865431 1111111122233345556766554433
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.29 E-value=1.4e-13 Score=135.85 Aligned_cols=113 Identities=25% Similarity=0.255 Sum_probs=47.3
Q ss_pred hhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCC
Q 037111 244 PQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSG 323 (964)
Q Consensus 244 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 323 (964)
+..+..+++|++|+|++|+|+ .++ .+..+++|++|+|++|+|+ .+|..+..+++|+.|++++|+++.. ..+..++
T Consensus 41 ~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~ 115 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKLV 115 (198)
T ss_dssp HHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHHH
T ss_pred hhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccccccccccc--ccccccc
Confidence 334444444444444444444 222 2444444444444444444 2333333333444444444444432 1123333
Q ss_pred cceEEEeecccccccc-cccccCCCcCCeeecCCCcccc
Q 037111 324 SLQYFSVHDNYFIGSL-PKTLRNCTSLERVRLEKNQLIG 361 (964)
Q Consensus 324 ~L~~L~l~~n~l~~~~-p~~l~~l~~L~~L~L~~N~l~~ 361 (964)
+|+.|++++|.+.... ...+..+++|+.|+|++|++..
T Consensus 116 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 116 NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred cccccccccchhccccccccccCCCccceeecCCCcccc
Confidence 3333333333332211 1234455555555555555543
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=6.1e-12 Score=118.64 Aligned_cols=89 Identities=24% Similarity=0.203 Sum_probs=41.9
Q ss_pred cCCCCCCCEEEcCCC-CCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCcccc
Q 037111 151 IGHLSSLKNLALDGN-HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKL 229 (964)
Q Consensus 151 ~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 229 (964)
+..+++|++|++++| .++...+..|.++++|+.|+|++|+|+...|..|..+++|++|+|++|+|+...+..|..+ +|
T Consensus 27 l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~-~l 105 (156)
T d2ifga3 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGL-SL 105 (156)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSC-CC
T ss_pred ccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhccc-cc
Confidence 333444444444433 2443333445555555555555555554444445555555555555555553333333332 35
Q ss_pred ceeeccccccC
Q 037111 230 TKLELSNNQLS 240 (964)
Q Consensus 230 ~~L~L~~N~l~ 240 (964)
++|+|++|.+.
T Consensus 106 ~~L~L~~Np~~ 116 (156)
T d2ifga3 106 QELVLSGNPLH 116 (156)
T ss_dssp CEEECCSSCCC
T ss_pred cccccCCCccc
Confidence 55555555553
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=5.1e-09 Score=98.92 Aligned_cols=59 Identities=32% Similarity=0.291 Sum_probs=26.9
Q ss_pred hhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccc-------cccccccceEEE
Q 037111 511 LGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPT-------NFENMHGLLSID 569 (964)
Q Consensus 511 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-------~~~~l~~L~~l~ 569 (964)
+..+++|+.|+|++|+|+...+-.+.....|+.|+|++|++++.... .+..+|+|+.||
T Consensus 87 ~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 87 VQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred HhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 44445555555555555432222222333455555555555433221 134455665554
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=2.7e-09 Score=100.91 Aligned_cols=121 Identities=21% Similarity=0.123 Sum_probs=73.0
Q ss_pred cCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCcccccc--CCCcccccccceec
Q 037111 420 QLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSI--PGNMGYLLKLHYLN 497 (964)
Q Consensus 420 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~ 497 (964)
+.+.||+++++.. ..+..+..+..++..++... .++..+..+++|++|+|++|+|+... +..+..+++|+.|+
T Consensus 23 ~~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~ 97 (162)
T d1koha1 23 SQQALDLKGLRSD----PDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILN 97 (162)
T ss_dssp SSCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCC
T ss_pred hhCeeecccCCCC----chhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccc
Confidence 3455666665432 12344444555555555443 34444556777888888888776542 34456677788888
Q ss_pred CCccccCccchhhhhccccCCeecccCccccCCCCh-------hcccccccceee
Q 037111 498 MSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPP-------EICNLESLEKLN 545 (964)
Q Consensus 498 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-------~~~~l~~L~~L~ 545 (964)
|++|+|+...+..+.+...|+.|++++|.+...... .+..+++|+.||
T Consensus 98 Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 98 LSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp CTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred cccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 888887765444444455677788888877654432 245567777665
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.44 E-value=3.3e-07 Score=94.04 Aligned_cols=149 Identities=15% Similarity=0.090 Sum_probs=103.0
Q ss_pred HHHHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCc
Q 037111 682 EEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHAR 760 (964)
Q Consensus 682 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 760 (964)
.++.+....|+.++..+.++.+.||+... +++.+++|+....... ....+.+|...++.+. +--+.+++.+..+++
T Consensus 7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~--~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~ 83 (263)
T d1j7la_ 7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG 83 (263)
T ss_dssp HHHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred HHHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCccc--chhhHHHHHHHHHHHhccCCCCcEEEEEecCC
Confidence 35556667787766655555678999875 4667889987533211 1234567777766553 444678888888888
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------------------------------
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC------------------------------- 809 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------- 809 (964)
..++||++++|.++.+..... . ....++.++++.++.||+..
T Consensus 84 ~~~lv~~~l~G~~~~~~~~~~----~---~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T d1j7la_ 84 WSNLLMSEADGVLCSEEYEDE----Q---SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEEECCSSEEHHHHTTTC----S---CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGG
T ss_pred ceEEEEEeccccccccccccc----c---cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhh
Confidence 999999999998887654211 1 12335566666677777532
Q ss_pred -------------------------CCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 810 -------------------------RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 810 -------------------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
...++|+|+.|.||++++++.+.|.||+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 1237999999999999987667799999774
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.85 E-value=1.6e-05 Score=80.41 Aligned_cols=130 Identities=15% Similarity=0.094 Sum_probs=84.9
Q ss_pred eeecCCc-eeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC--CCceeeEEeeeecCceeEEEEEeccCC
Q 037111 696 CIGRGGY-GSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR--HRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 696 ~lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.+..|.. +.||+....++..+++|...... ...+..|+..++.+. .-.+.+++++..+++..++||+|++|-
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~-----~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~ 91 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQ 91 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSE
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC-----HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecc
Confidence 3455554 67999998888889999865322 123556766666553 333677888888888999999999986
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------------------------------------------
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC------------------------------------------- 809 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------- 809 (964)
++.+.. ... ...+.++++.++-||+..
T Consensus 92 ~~~~~~-------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (255)
T d1nd4a_ 92 DLLSSH-------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 161 (255)
T ss_dssp ETTTSC-------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred cccccc-------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHH
Confidence 553311 111 112233334444444211
Q ss_pred ------------CCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 810 ------------RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 810 ------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
...++|+|+.|.||+++.+..+-|.||+.+.
T Consensus 162 ~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 162 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 2347999999999999987777899998774
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.75 E-value=3.3e-06 Score=79.44 Aligned_cols=114 Identities=17% Similarity=0.176 Sum_probs=53.0
Q ss_pred cCCcceeecccc-cccCC----CchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhcccc
Q 037111 442 LTSLNDLILNGN-QLSGG----IPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQ 516 (964)
Q Consensus 442 l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 516 (964)
.++|++|+|+++ .++.. +...+...++|+.|+|++|.+.......+ ...+...+.
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~l--------------------a~~L~~n~~ 73 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGL--------------------IELIETSPS 73 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTH--------------------HHHHHHCSS
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHH--------------------hhhhhhccc
Confidence 466777777653 34421 12233344555555555555543222222 122333344
Q ss_pred CCeecccCccccCCC----ChhcccccccceeeccCCcCCCc-------ccccccccccceEEEecCCcc
Q 037111 517 LSELDLSHNLLRGEI----PPEICNLESLEKLNLSHNNLSGS-------IPTNFENMHGLLSIDISYNEL 575 (964)
Q Consensus 517 L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~-------~~~~~~~l~~L~~l~ls~N~l 575 (964)
|++|+|++|.|+... -..+..-++|++|+|++|.+... +...+..-++|+.|+++++..
T Consensus 74 L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 74 LRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp CCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred ccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 555555555444211 12233344556666655544321 233344456666777666543
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.70 E-value=6.6e-06 Score=77.27 Aligned_cols=109 Identities=11% Similarity=0.116 Sum_probs=59.2
Q ss_pred cccCcEEeccCC-ccccc----CCccccccCCcceeecccccccCC----CchhhhccCCCCceecccCccccccC----
Q 037111 418 ATQLHELDFSSN-HLVGK----VPLELANLTSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRFSKSIP---- 484 (964)
Q Consensus 418 l~~L~~L~Ls~N-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~---- 484 (964)
.++|++|+|+++ .+... +-..+...++|++|+|++|.+... +...+...+.|+.|+|++|.++....
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHH
Confidence 356677777653 34322 222345557777888887777632 22344455667777777777654322
Q ss_pred CCcccccccceecCCccccCcc-------chhhhhccccCCeecccCcc
Q 037111 485 GNMGYLLKLHYLNMSSNEFSQE-------IPIQLGKLVQLSELDLSHNL 526 (964)
Q Consensus 485 ~~~~~l~~L~~L~Ls~N~l~~~-------~~~~~~~l~~L~~L~Ls~N~ 526 (964)
..+...+.|++|++++|.+... +...+...++|+.|+++.+.
T Consensus 94 ~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 2233445566666666654321 23334445566666665543
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.15 E-value=2e-05 Score=73.79 Aligned_cols=88 Identities=14% Similarity=0.187 Sum_probs=44.9
Q ss_pred cccccceecCCccccCcc----chhhhhccccCCeecccCccccCC----CChhcccccccce--eeccCCcCCC----c
Q 037111 489 YLLKLHYLNMSSNEFSQE----IPIQLGKLVQLSELDLSHNLLRGE----IPPEICNLESLEK--LNLSHNNLSG----S 554 (964)
Q Consensus 489 ~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~--L~Ls~N~l~~----~ 554 (964)
..++|++|+|++|.++.. +...+...++++.+++++|.++.. +...+...++|+. |++++|.+.. .
T Consensus 44 ~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~ 123 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME 123 (166)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH
T ss_pred cCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHH
Confidence 344455555555555432 222344455666666666665432 1233444556654 3334555643 2
Q ss_pred ccccccccccceEEEecCCccc
Q 037111 555 IPTNFENMHGLLSIDISYNELD 576 (964)
Q Consensus 555 ~~~~~~~l~~L~~l~ls~N~l~ 576 (964)
+...+...++|+.|++++|+..
T Consensus 124 La~~L~~n~~L~~L~l~~~~~~ 145 (166)
T d1io0a_ 124 IANMLEKNTTLLKFGYHFTQQG 145 (166)
T ss_dssp HHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHhCCCcCEEeCcCCCCc
Confidence 3444556677777777766543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.13 E-value=0.00061 Score=73.06 Aligned_cols=78 Identities=17% Similarity=0.125 Sum_probs=46.6
Q ss_pred cceeecCCceeEEEEEeCC-CCeEEEEEeccc---cCc--hhhHHHHHHHHHHHhCCC---CCceeeEEeeeecCceeEE
Q 037111 694 SFCIGRGGYGSVYKAELPS-GDTVAVKKLHSF---TGE--TTHQKEFLSEIKALTGVR---HRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~--~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~l 764 (964)
.+.||.|....||+++..+ ++.|+||.-... .+. .........|++.++.+. ...+++++.+. +...++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEE
Confidence 3468999999999998654 678999975321 111 111223445666665542 24456666553 445678
Q ss_pred EEEeccCCC
Q 037111 765 VYEYLERGS 773 (964)
Q Consensus 765 v~e~~~~gs 773 (964)
|||++++..
T Consensus 109 vmE~L~~~~ 117 (392)
T d2pula1 109 VMEDLSHLK 117 (392)
T ss_dssp EECCCTTSE
T ss_pred EEeccCCcc
Confidence 999998754
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.05 E-value=7e-05 Score=69.99 Aligned_cols=63 Identities=16% Similarity=0.207 Sum_probs=28.9
Q ss_pred cccCcEEeccC-Cccccc----CCccccccCCcceeecccccccCCCc----hhhhccCCCCceecccCccc
Q 037111 418 ATQLHELDFSS-NHLVGK----VPLELANLTSLNDLILNGNQLSGGIP----PELGLLTDLGYLDLSANRFS 480 (964)
Q Consensus 418 l~~L~~L~Ls~-N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~ 480 (964)
.+.|++|+|++ +.|+.. +...+...++|++|+|++|.++.... ..+...+.++.|++++|.++
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 34555555554 334321 12223344556666666665542211 22333455555555555543
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.00094 Score=69.61 Aligned_cols=136 Identities=13% Similarity=0.115 Sum_probs=76.4
Q ss_pred CceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc--eeeEE-----eeeecCceeEEEEEeccCCC
Q 037111 701 GYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN--IVKFY-----GFCSHARHSFLVYEYLERGS 773 (964)
Q Consensus 701 ~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~-----~~~~~~~~~~lv~e~~~~gs 773 (964)
..-.||+++.++|++|++|..... ....+++..|+..+..+.... ++..+ ..+..++..+.|+++++|..
T Consensus 34 ~EN~vy~v~~~dg~~~VlK~~rp~---~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 34 YENRVYQFQDEDRRRFVVKFYRPE---RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp SSSEEEEECCTTCCCEEEEEECTT---TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred ccceeEEEEcCCCCEEEEEEeCCC---CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 345899999999999999987532 223456777887776653211 11111 12234567889999998742
Q ss_pred HH-----HH------h---hh--c-----CCCCCCH-------------------H---HHHHHHHHHHHHHHHH-hhCC
Q 037111 774 LA-----RI------L---SS--E-----TATEMDW-------------------S---KRVNVIKGVAHALSYM-HHEC 809 (964)
Q Consensus 774 L~-----~~------l---~~--~-----~~~~l~~-------------------~---~~~~i~~~i~~~l~~L-H~~~ 809 (964)
+. .+ + +. . .....++ . .....+.++...+.-. .+..
T Consensus 111 ~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 190 (325)
T d1zyla1 111 FEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDF 190 (325)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCS
T ss_pred CCCCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 21 11 1 00 0 0011111 1 1122223333332222 1222
Q ss_pred CCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 810 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
+.++||+|+.+.||+++++ ..+.||+.+..
T Consensus 191 p~~liHgDlh~~NvL~~~~--~~~IDFdd~~~ 220 (325)
T d1zyla1 191 TVLRLHGDCHAGNILWRDG--PMFVDLDDARN 220 (325)
T ss_dssp CCEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred CceeecCCCCcccEEEeCC--ceEEechhccc
Confidence 4578999999999999743 45899998864
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.46 E-value=0.0065 Score=62.62 Aligned_cols=158 Identities=13% Similarity=0.076 Sum_probs=83.5
Q ss_pred cccHHHHHHHhhcccccce-----eecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-----CC
Q 037111 678 KLVYEEIIRSINNFDESFC-----IGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-----HR 747 (964)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~-----lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~ 747 (964)
.++.+++.....+|..++. |..|---+.|+.+..+| +|++|++.... . ..++..|+..+..+. .|
T Consensus 2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~-~---~~~l~~~~~~l~~L~~~g~pvp 76 (316)
T d2ppqa1 2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV-E---KNDLPFFLGLMQHLAAKGLSCP 76 (316)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC-C---HHHHHHHHHHHHhhhhcccccc
Confidence 3556778888888877544 34566678899987655 58999875321 1 123444555555442 22
Q ss_pred ceeeEE-e--eeecCceeEEEEEeccCCCHHH-----------Hh---hhc--C-----CCCC-----------------
Q 037111 748 NIVKFY-G--FCSHARHSFLVYEYLERGSLAR-----------IL---SSE--T-----ATEM----------------- 786 (964)
Q Consensus 748 niv~l~-~--~~~~~~~~~lv~e~~~~gsL~~-----------~l---~~~--~-----~~~l----------------- 786 (964)
..++.. | +.......+.++.+..+..... .+ +.. . ....
T Consensus 77 ~pi~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (316)
T d2ppqa1 77 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 156 (316)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred ccceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhh
Confidence 222111 0 1122455677777777643221 00 000 0 0000
Q ss_pred -CHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 787 -DWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 787 -~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
........+..+...+...+. ..+.++||+|+.+.||+++.+...-|.||+.+.
T Consensus 157 ~~~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 157 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hcchhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence 001111222222222222222 225689999999999999988877899999875
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.64 E-value=0.011 Score=62.90 Aligned_cols=73 Identities=18% Similarity=0.164 Sum_probs=48.1
Q ss_pred cceeecCCceeEEEEEeCCC--------CeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEE
Q 037111 694 SFCIGRGGYGSVYKAELPSG--------DTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~--------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 764 (964)
++.|+.|-.=.+|++..+++ +.|++++.... .......+|..+++.+. +.-..++++++.+ ++
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~----~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~ 118 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 118 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc----chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ce
Confidence 35688888889999986543 45666665321 12234557888887774 4445678888754 68
Q ss_pred EEEeccCCCH
Q 037111 765 VYEYLERGSL 774 (964)
Q Consensus 765 v~e~~~~gsL 774 (964)
|+||++|.++
T Consensus 119 I~efi~g~~l 128 (395)
T d1nw1a_ 119 LEEYIPSRPL 128 (395)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeccccC
Confidence 9999987543
|