Citrus Sinensis ID: 037194

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-----
Protein Sequence
MAKRDFSSNPCSEVGGSFSIQVSEFVESEKSSLTRVLKQPSLHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDIFKR
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccHHHHHHHHHcccHHHHHHHcccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccHHHHHHccccccHHHHHccccHHHHHccccccccccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHcccccccHHHHHHHcccHHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHcHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
makrdfssnpcsevggsfsIQVSEFVESEKSSLTRvlkqpslhllsgkkrklcCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLtfmdpedlmlqdengnTAFCFAAAVGAVDIANLMlkknpsllgirgsknmpplYFAALfgqtdtasflfhksekelptedrkVIFITSVdtglygkyqdifkr
Flexible Loop (DISEMBL)
makrdfssnpcsevggsfsIQVSEFVESEKssltrvlkqpslhllsgkkrklccsERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKsekelptedrkvifitsvdtglygkyqdifkr
Low Complexity Region (SEG)
MAKRDFSSNPCSEVGGSFSIQVSEFVESEKSSLTRVLKQPSLHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDIFKR
Disordered region (IsUnstruct)
****************************************SLHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDIF**
Disordered Region (DISOPRED)
*****************************************LHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDIFKR
Disordered Region (DISEMBL)
*************VGGSFSIQVSEF*********RVLKQPSLHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDIFKR
Disordered Region (DISPRO)
****************************EKSSLTRVLKQPSLHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDIFKR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAKRDFSSNPCSEVGGSFSIQVSEFVESEKSSLTRVLKQPSLHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDIFKR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	215	2.2.26 [Sep-21-2011]
Q8Q0U0	360	Putative ankyrin repeat p	yes	no	0.590	0.352	0.270	1e-05
Q01484	3957	Ankyrin-2 OS=Homo sapiens	yes	no	0.548	0.029	0.290	6e-05
Q8C8R3	3898	Ankyrin-2 OS=Mus musculus	yes	no	0.548	0.030	0.290	7e-05
O74881	1347	BTB/POZ domain-containing	yes	no	0.348	0.055	0.350	0.0001
Q10311	234	Ankyrin repeat-containing	no	no	0.423	0.388	0.344	0.0008

>sp|Q8Q0U0|Y045_METMA Putative ankyrin repeat protein MM_0045 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=MM_0045 PE=4 SV=1

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 28/155 (18%)

Query: 46  SGKKRKLCCSERL------LLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVA 99
           +G+   +C ++R       LL KA     +++  G      ++ + AA   GH+ ++ + 
Sbjct: 199 NGETALICAADRAHRDIAELLIKAGADLNIQDNSG------KTALVAATKIGHKGIVELL 252

Query: 100 TGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGS 159
             A                DL LQD+NGNTA  +AA  G  DI NL+++   S L I   
Sbjct: 253 VNA--------------GADLNLQDKNGNTALIYAADRGYRDIVNLLIEGGAS-LNIPDE 297

Query: 160 KNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRK 194
             +  L F+A  G+ D    L  K+  ++  ED+ 
Sbjct: 298 AGLTALMFSAQTGRKDIVELLI-KAGADINIEDKN 331

Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (taxid: 192952)

>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4

 Score = 47.8 bits (112), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED 119
           L+ AA  G+++ +  L        +  A     QT LH+A+   +T  VQ LL  M   D
Sbjct: 468 LHMAARAGQVEVVRCLL---RNGALVDARAREEQTPLHIASRLGKTEIVQLLLQHMAHPD 524

Query: 120 LMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASF 179
                 NG T    +A  G VD+A+++L+   +   +   K   PL+ AA +G  D A  
Sbjct: 525 AATT--NGYTPLHISAREGQVDVASVLLEAG-AAHSLATKKGFTPLHVAAKYGSLDVAKL 581

Query: 180 LFHK 183
           L  +
Sbjct: 582 LLQR 585

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Homo sapiens (taxid: 9606)

>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2

 Score = 47.4 bits (111), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED 119
           L+ AA  G+++ +  L        +  A     QT LH+A+   +T  VQ LL  M   D
Sbjct: 468 LHMAARAGQVEVVRCLL---RNGALVDARAREEQTPLHIASRLGKTEIVQLLLQHMAHPD 524

Query: 120 LMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASF 179
                 NG T    +A  G VD+A+++L+   +   +   K   PL+ AA +G  D A  
Sbjct: 525 AATT--NGYTPLHISAREGQVDVASVLLEAG-AAHSLATKKGFTPLHVAAKYGSLDVAKL 581

Query: 180 LFHK 183
           L  +
Sbjct: 582 LLQR 585

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Mus musculus (taxid: 10090)

>sp|O74881|BTB1_SCHPO BTB/POZ domain-containing protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=btb1 PE=1 SV=1

 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPS 152
           +TVLH+A    + SFV+ LL     +  +  +E+G TA   A  VG ++ A+L+L K+PS
Sbjct: 53  RTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAASLLLSKDPS 112

Query: 153 L--LGIRGSKNMPPLYF 167
              L I+  + + P  F
Sbjct: 113 FRSLRIKDKEGLSPFQF 129

Probable substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q10311|YD58_SCHPO Ankyrin repeat-containing protein C6C3.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6C3.08 PE=4 SV=1

 Score = 43.9 bits (102), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 2/93 (2%)

Query: 89  TEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLK 148
           T G QT LH A G  + S VQ LL    PE +  +D  G T    AAAVG + +   ++ 
Sbjct: 104 TRGGQTCLHYAAGKGRLSIVQ-LLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLIS 162

Query: 149 KNPSLLGIRGSKNMPPLYFAALFGQTDTASFLF 181
           +  + L    S    PL+FA   G  D    L 
Sbjct: 163 QR-APLNTSDSYGFTPLHFALAEGHPDVGVELV 194

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	215
356532642	590	PREDICTED: ankyrin repeat-containing pro	0.781	0.284	0.447	5e-31
147860696	891	hypothetical protein VITISV_011174 [Viti	0.767	0.185	0.452	5e-30
356558266	584	PREDICTED: uncharacterized protein LOC10	0.781	0.287	0.429	6e-30
356498501	567	PREDICTED: uncharacterized protein LOC10	0.865	0.328	0.409	1e-29
351726560	220	uncharacterized protein LOC100526910 [Gl	0.781	0.763	0.403	3e-27
255590066	395	ankyrin repeat-containing protein, putat	0.860	0.468	0.363	7e-26
225425076	563	PREDICTED: ankyrin repeat-containing pro	0.827	0.316	0.405	8e-26
356558270	199	PREDICTED: uncharacterized protein LOC10	0.679	0.733	0.423	9e-26
359472754	789	PREDICTED: ankyrin repeat-containing pro	0.748	0.204	0.404	2e-25
356532646	606	PREDICTED: uncharacterized protein LOC10	0.772	0.273	0.396	2e-25

>gi|356532642|ref|XP_003534880.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Glycine max]

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 114/170 (67%), Gaps = 2/170 (1%)

Query: 38  KQPSLHLLSGKK-RKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVL 96
           ++P LHL+S ++ R    ++ + L+KAAL+G+ KE + + ++D  +++ +AIT+G  TVL
Sbjct: 27  RRPLLHLVSTQESRHRYLTQCVPLHKAALEGDWKEAKKILDQD-PALLNSAITKGWATVL 85

Query: 97  HVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGI 156
           H+A GA   SFV++LL  M  EDL LQD  GNTAFCFAAAVG V IA  M +KN SL  I
Sbjct: 86  HIAVGANHESFVEELLKLMSREDLELQDIKGNTAFCFAAAVGNVHIAERMRRKNASLPMI 145

Query: 157 RGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLY 206
           RG + + PL+ A L G+++ A +LF K+ + L  +D   +F+  V++ LY
Sbjct: 146 RGGEGVTPLHLAVLQGRSEMAWYLFDKTRETLYDDDWFQVFLICVNSRLY 195

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147860696|emb|CAN81449.1| hypothetical protein VITISV_011174 [Vitis vinifera]

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 107/168 (63%), Gaps = 3/168 (1%)

Query: 40  PSLHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVA 99
           PSL  LSG  R    +  + LY+AALKG+ +  +G+FE  + + +   IT    TVLH+A
Sbjct: 313 PSLDPLSGD-RAFYLNVCIPLYQAALKGDWETAKGIFEI-HPTAVRVRITRNLDTVLHIA 370

Query: 100 TGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGS 159
             AK+T FV++++  MDP DL LQ+EN NTAFCFAAA G V IA +M+KKN  L  IRG+
Sbjct: 371 AAAKRTHFVEEVVGLMDPNDLELQNENSNTAFCFAAAAGTVRIAEVMVKKNDHLPMIRGN 430

Query: 160 KNMPPLYFAALFGQTDTASFLFHKS-EKELPTEDRKVIFITSVDTGLY 206
           + M PL+ AAL G ++   +L++K+  ++L  ED   I  T + T LY
Sbjct: 431 QQMMPLHMAALLGHSEMVWYLYNKTNHQDLKDEDWIGILNTCISTDLY 478

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558266|ref|XP_003547428.1| PREDICTED: uncharacterized protein LOC100814409 [Glycine max]

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 113/170 (66%), Gaps = 2/170 (1%)

Query: 38  KQPSLHLLSGKK-RKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVL 96
           ++P LHL+S ++ R    ++ + L+KAALKG+ KE + + ++D  +++ +AIT+G  TVL
Sbjct: 22  RRPLLHLVSTQEARHRYLTQCVPLHKAALKGDWKEAKKILDQD-PTLLKSAITKGWATVL 80

Query: 97  HVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGI 156
           H+A GA    FV++L+  +  EDL L D+ GNTAFCFAAAVG V IA +M  KN SL  I
Sbjct: 81  HIAVGANHECFVEELVKLLSREDLELLDDKGNTAFCFAAAVGNVHIAEIMRIKNESLPTI 140

Query: 157 RGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLY 206
           RG + + PL+ A L G+++   +LF K+ + L  +D   +F+  V++GLY
Sbjct: 141 RGGEGVTPLHLAVLQGRSEMTRYLFDKTREILYDDDWITLFLICVNSGLY 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498501|ref|XP_003518089.1| PREDICTED: uncharacterized protein LOC100784675 [Glycine max]

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 7/193 (3%)

Query: 20  IQVSEFVESEKSSLTRV----LKQPSLHLLSGKKRK-LCCSERLLLYKAALKGEMKEIEG 74
           + V++ +  ++  L RV     ++P LHL+S ++ K    ++ + L+KA+LKG+ KE   
Sbjct: 1   MAVADSISFQEQLLQRVASAQFRKPLLHLVSTQEDKGRYLTQCVPLHKASLKGDWKEARK 60

Query: 75  LFEKDYRSIICAAITEG-HQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF 133
           L ++D  S++  AIT+G   T+LH+A GA +  FV++LL  M PE+L LQD  GNTAFCF
Sbjct: 61  LLDQD-GSLLKTAITKGGWATLLHIAVGANRVHFVEELLKLMQPEELELQDHKGNTAFCF 119

Query: 134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDR 193
           AAAVG V IA +M + N SL  IRG   + PL+ A L G+ + A  LF K+++     D 
Sbjct: 120 AAAVGNVQIAEMMERINASLPTIRGGGGLTPLHLAVLQGRKEMAWHLFPKTKEIFEEVDW 179

Query: 194 KVIFITSVDTGLY 206
            ++FI  + +GLY
Sbjct: 180 TILFINCIKSGLY 192

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726560|ref|NP_001235851.1| uncharacterized protein LOC100526910 [Glycine max] gi|255631131|gb|ACU15931.1| unknown [Glycine max]

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 101/171 (59%), Gaps = 3/171 (1%)

Query: 38  KQPSLHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLH 97
           + PS H+L  K+  L   + + LYK AL+G+      + + D  S++ AAIT+   T+LH
Sbjct: 53  RHPSRHILEDKREYL--EKCIPLYKLALRGDWNAARRMIDAD-TSLLNAAITKEWGTLLH 109

Query: 98  VATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIR 157
           V  G  Q  FV QL+  + P+DL LQ+ NGNTAFC+AAA G++ IA +M+KKN     IR
Sbjct: 110 VVAGTDQVHFVNQLVKLLSPDDLELQNFNGNTAFCYAAAFGSLQIAAMMIKKNACPPKIR 169

Query: 158 GSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGK 208
           G +   PLY AAL G+ D A  L+  + + L  ++   +F   +  GLYG+
Sbjct: 170 GGEGATPLYMAALQGKGDMARHLYDLTSEILEEDEWTTLFFLCIKNGLYGE 220

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255590066|ref|XP_002535165.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223523865|gb|EEF27218.1| ankyrin repeat-containing protein, putative [Ricinus communis]

 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 5/190 (2%)

Query: 21  QVSEFVESEKSSLTRVLKQPSLHLLSGKKRKLCCSER---LLLYKAALKGEMKEIEGLFE 77
           QVS     + S        P+L  ++    ++ CS +   ++LY AALKG+ K  + ++ 
Sbjct: 136 QVSNATADQPSRPPTGFMTPTLAQVAENPGEIKCSNQTRHIVLYVAALKGDWKTAK-IYL 194

Query: 78  KDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV 137
           +     + A IT G +TVLH+A GA+ T FV++L+  M P+DL LQ++ GNTA CFAA  
Sbjct: 195 RWNPHAVRATITRGSETVLHIAAGARHTLFVKKLVKRMTPDDLALQNKVGNTALCFAAVS 254

Query: 138 GAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKS-EKELPTEDRKVI 196
           G  +IA +++ KN +L  +RGS+   PLY A L G+ D   +L+  + +K+L  EDR  +
Sbjct: 255 GITEIAKVLVNKNKTLPLVRGSQGATPLYMAVLLGRRDMVWYLYSVTDDKDLSGEDRIGL 314

Query: 197 FITSVDTGLY 206
            I ++ + L+
Sbjct: 315 LIAAITSNLF 324

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425076|ref|XP_002271486.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 107/185 (57%), Gaps = 7/185 (3%)

Query: 34  TRVLKQPS----LHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAIT 89
           T V+  P     L LLSG+ R L  +  + LY AA+KG+ K  EG+F K +   +   IT
Sbjct: 30  TEVVTSPQPMSPLVLLSGE-RYLYLTVCIPLYGAAMKGDWKTAEGIF-KMFPPAVRMTIT 87

Query: 90  EGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
           +G  T LH+A  AK   FV++++  M+P+DL LQ++  NTA CFAAA G V IA +M+KK
Sbjct: 88  QGRDTTLHIAAAAKHVQFVEEMVKMMEPKDLELQNKYSNTALCFAAASGIVRIAEVMVKK 147

Query: 150 NPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKE-LPTEDRKVIFITSVDTGLYGK 208
           N +L  I+G   M PL+ AAL G ++   +L++K+  E L   D   +  T + T LY  
Sbjct: 148 NENLPMIQGGGGMIPLHMAALLGHSEMVRYLYNKTVHEHLAPGDWVGLLNTCISTDLYDV 207

Query: 209 YQDIF 213
             DI 
Sbjct: 208 ALDIL 212

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558270|ref|XP_003547430.1| PREDICTED: uncharacterized protein LOC100815473 [Glycine max]

 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 93/151 (61%), Gaps = 5/151 (3%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED 119
           +Y  A+KG+ KE + +  KD R +  AAI++G  T+LHVA  A    FV++L+  +  +D
Sbjct: 47  IYNLAIKGDWKEAKTMLAKD-RRLATAAISQGWATLLHVAAEANHLHFVEELVKLLSEKD 105

Query: 120 LMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASF 179
           L +QD  GNTAFCFAAAVG V IA  M +KN SL  IRG + + PL+ AAL G+ + A +
Sbjct: 106 LEIQDLKGNTAFCFAAAVGNVKIAEAMARKNRSLPTIRGGEGLTPLHLAALQGKGEMAWY 165

Query: 180 LFHKSEKELP----TEDRKVIFITSVDTGLY 206
           L+H +   L       D  ++F   ++TG+Y
Sbjct: 166 LYHDTVHNLNHMFGDADWSLLFFLCINTGIY 196

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472754|ref|XP_002276402.2| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 97/163 (59%), Gaps = 2/163 (1%)

Query: 45  LSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQ 104
           +SG+ R       +LL  AAL G+ K  +   E + +++  A IT   +T LH+A GA+ 
Sbjct: 163 ISGEIRSNGLKAYVLLCLAALNGDWKSAKAFLESNPQAVR-ARITRRSETALHIAAGARH 221

Query: 105 TSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPP 164
           T FV++L+  M P+DL LQ++ GNTA CFAAA G   IA +M+ KN  L  IRGSK + P
Sbjct: 222 TRFVEELVKLMKPDDLALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVTP 281

Query: 165 LYFAALFGQTDTASFLFHKSEKE-LPTEDRKVIFITSVDTGLY 206
           LY AAL G  D   +L+  +E++ L  EDR  + + ++   L+
Sbjct: 282 LYMAALVGHKDMVRYLYSVTEEDNLTKEDRIGLLVAAITANLF 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532646|ref|XP_003534882.1| PREDICTED: uncharacterized protein LOC100813731 [Glycine max]

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 98/169 (57%), Gaps = 3/169 (1%)

Query: 38  KQPSLHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLH 97
           + PS H+L  K+  L   + + LYK AL+G+      + + D  S++ AAIT+   T+LH
Sbjct: 54  RHPSRHILENKREYL--EKCIPLYKLALRGDWNAARRMIDAD-TSLLNAAITKEWGTLLH 110

Query: 98  VATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIR 157
           V  G  Q  FV  L+  ++P+DL L++ NGNTAFC+AAA G + IA+LM+KKN  L  IR
Sbjct: 111 VVAGTDQVHFVDLLVKLLNPDDLELKNFNGNTAFCYAAASGNLQIASLMIKKNAGLPKIR 170

Query: 158 GSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLY 206
           G +   P Y AAL G+ D A  L+  +   L  ++   +F   +  GLY
Sbjct: 171 GGEGATPFYMAALQGKDDMARHLYDLTTGILEEDEWTTLFFLCIKNGLY 219

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	215
TAIR|locus:2165194	282	AT5G35830 [Arabidopsis thalian	0.744	0.567	0.372	3.8e-23
TAIR|locus:2080240	574	AT3G54070 "AT3G54070" [Arabido	0.720	0.270	0.343	1.7e-20
RGD|620156	843	Ank2 "ankyrin 2, neuronal" [Ra	0.548	0.139	0.306	8.7e-05
UNIPROTKB|J9NTH2	2063	ANK2 "Uncharacterized protein"	0.548	0.057	0.298	0.00055
POMBASE|SPAC6C3.08	234	SPAC6C3.08 "proteasome regulat	0.395	0.363	0.356	0.00062
TAIR|locus:2173767	315	EMB506 "embryo defective 506"	0.837	0.571	0.239	0.0007
TAIR|locus:2063804	240	AT2G03430 "AT2G03430" [Arabido	0.613	0.55	0.282	0.00088
UNIPROTKB|E5RIS1	102	ANKRD6 "Ankyrin repeat domain-	0.423	0.892	0.333	0.00099
UNIPROTKB|E5RJ45	118	ANKRD6 "Ankyrin repeat domain-	0.423	0.771	0.333	0.00099

TAIR|locus:2165194 AT5G35830 [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 63/169 (37%), Positives = 94/169 (55%)

Query:    45 LSGKKRKLCCSERLL-----LYKAALKGEMKEIEGLF-EKDYRSIICAAITEGHQTVLHV 98
             L   +R   C ++L      LY+AALKG+ K   G+  E+ Y  II   IT   +TVLH+
Sbjct:    71 LHNVQRNFSCDDKLRAKGVQLYQAALKGDWKAANGIIIEQKY--IIYQKITSKSETVLHI 128

Query:    99 ATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRG 158
             A  AK   FV+ LL  ++  DL L++ +GNTA CFAAA G V+IA ++++KN  L  IRG
Sbjct:   129 AVAAKHEGFVRNLLGSLESNDLALRNVDGNTALCFAAASGVVEIAKMLIEKNKDLPMIRG 188

Query:   159 SKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLY 206
                  P++ AALFG  +   +L+  +  +E   E+   +F   +   +Y
Sbjct:   189 GGKTTPIHMAALFGHGEMVKYLYKNTRFREFNDEEFVNLFHAVISADIY 237

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2080240 AT3G54070 "AT3G54070" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 54/157 (34%), Positives = 86/157 (54%)

Query:    57 RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMD 116
             R L+YKA L G+ K    L  +   +++   IT   +  LH+A  AK   FV+ LL  MD
Sbjct:    51 RNLMYKAVLTGDWKTASTLISRKECNVV-EQITGNSEIALHIAVAAKHKDFVRNLLREMD 109

Query:   117 PEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDT 176
             P DL L++++GNT   FAAA+G ++ A +++     L  I   K M P++ AAL+G  + 
Sbjct:   110 PPDLSLKNKDGNTPLSFAAALGDIETAEMLINMIRDLPDISNEKTMTPIHIAALYGHGEM 169

Query:   177 ASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI 212
               +LF K+  K+L  +    +F T +   +YG + D+
Sbjct:   170 VQYLFSKTSIKDLNDQQYLNLFHTMISADIYGVFADV 206

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

RGD|620156 Ank2 "ankyrin 2, neuronal" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 8.7e-05, P = 8.7e-05
 Identities = 38/124 (30%), Positives = 59/124 (47%)

Query:    60 LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED 119
             L+ AA  GE++ +  L      +++ A   E  QT LH+A+   +T  VQ LL  M   D
Sbjct:   433 LHMAARAGEVEVVRCLLRNG--ALVDARARE-EQTPLHIASRLGKTEIVQLLLQHMAHPD 489

Query:   120 LMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASF 179
                   NG T    +A  G VD+A+++L+   +   +   K   PL+ AA +G  D A  
Sbjct:   490 AATT--NGYTPLHISAREGQVDVASVLLEAGAAH-SLATKKGFTPLHVAAKYGSLDVAKL 546

Query:   180 LFHK 183
             L  +
Sbjct:   547 LLQR 550

GO:0002027 "regulation of heart rate" evidence=ISO

GO:0003283 "atrial septum development" evidence=ISO

GO:0005200 "structural constituent of cytoskeleton" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0006874 "cellular calcium ion homeostasis" evidence=ISO

GO:0007399 "nervous system development" evidence=IEP

GO:0008104 "protein localization" evidence=ISO

GO:0010628 "positive regulation of gene expression" evidence=ISO

GO:0010881 "regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion" evidence=ISO

GO:0010882 "regulation of cardiac muscle contraction by calcium ion signaling" evidence=ISO

GO:0014704 "intercalated disc" evidence=ISO

GO:0015459 "potassium channel regulator activity" evidence=ISO

GO:0016323 "basolateral plasma membrane" evidence=ISO

GO:0019899 "enzyme binding" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0030018 "Z disc" evidence=ISO

GO:0030315 "T-tubule" evidence=ISO

GO:0030507 "spectrin binding" evidence=ISO

GO:0030674 "protein binding, bridging" evidence=ISO

GO:0030913 "paranodal junction assembly" evidence=IEP

GO:0031430 "M band" evidence=ISO

GO:0031672 "A band" evidence=ISO

GO:0033292 "T-tubule organization" evidence=ISO

GO:0033365 "protein localization to organelle" evidence=ISO

GO:0034394 "protein localization to cell surface" evidence=ISO

GO:0034613 "cellular protein localization" evidence=ISO

GO:0042383 "sarcolemma" evidence=ISO

GO:0043005 "neuron projection" evidence=IDA

GO:0043034 "costamere" evidence=ISO

GO:0043268 "positive regulation of potassium ion transport" evidence=ISO

GO:0044325 "ion channel binding" evidence=ISO

GO:0045121 "membrane raft" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0050821 "protein stabilization" evidence=ISO

GO:0051117 "ATPase binding" evidence=ISO

GO:0051279 "regulation of release of sequestered calcium ion into cytosol" evidence=ISO

GO:0051597 "response to methylmercury" evidence=IEP

GO:0051924 "regulation of calcium ion transport" evidence=ISO

GO:0051928 "positive regulation of calcium ion transport" evidence=ISO

GO:0055117 "regulation of cardiac muscle contraction" evidence=ISO

GO:0060048 "cardiac muscle contraction" evidence=ISO

GO:0060307 "regulation of ventricular cardiac muscle cell membrane repolarization" evidence=ISO

GO:0070972 "protein localization to endoplasmic reticulum" evidence=ISO

GO:0072659 "protein localization to plasma membrane" evidence=ISO

GO:0072661 "protein targeting to plasma membrane" evidence=ISO

GO:0086004 "regulation of cardiac muscle cell contraction" evidence=ISO

GO:0086005 "regulation of ventricular cardiac muscle cell action potential" evidence=ISO

GO:0086014 "regulation of atrial cardiac muscle cell action potential" evidence=ISO

GO:0086015 "regulation of SA node cell action potential" evidence=ISO

GO:0086036 "regulation of cardiac muscle cell membrane potential" evidence=ISO

GO:0086066 "atrial cardiac muscle cell to AV node cell communication" evidence=ISO

GO:0086070 "SA node cell to atrial cardiac muscle cell communication" evidence=ISO

GO:0086091 "regulation of heart rate by cardiac conduction" evidence=ISO

GO:1901018 "positive regulation of potassium ion transmembrane transporter activity" evidence=ISO

GO:1901019 "regulation of calcium ion transmembrane transporter activity" evidence=ISO

GO:1901021 "positive regulation of calcium ion transmembrane transporter activity" evidence=ISO

GO:2001257 "regulation of cation channel activity" evidence=ISO

GO:2001259 "positive regulation of cation channel activity" evidence=ISO

UNIPROTKB|J9NTH2 ANK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
 Identities = 37/124 (29%), Positives = 59/124 (47%)

Query:    60 LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED 119
             L+ AA  G+++ +  L      +++ A   E  QT LH+A+   +T  VQ LL  M   D
Sbjct:   485 LHMAARAGQVEVVRCLLRNG--ALVDARARE-EQTPLHIASRLGKTEIVQLLLQHMAHPD 541

Query:   120 LMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASF 179
                   NG T    +A  G VD+A+++L+   +   +   K   PL+ AA +G  D A  
Sbjct:   542 AATT--NGYTPLHISAREGQVDVASVLLEAGAAH-SLATKKGFTPLHVAAKYGSLDVAKL 598

Query:   180 LFHK 183
             L  +
Sbjct:   599 LLQR 602

GO:0007165 "signal transduction" evidence=IEA

POMBASE|SPAC6C3.08 SPAC6C3.08 "proteasome regulatory particle, gankyrin (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 107 (42.7 bits), Expect = 0.00062, P = 0.00062
 Identities = 31/87 (35%), Positives = 40/87 (45%)

Query:    89 TEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLK 148
             T G QT LH A G  + S VQ LL    PE +  +D  G T    AAAVG + +   ++ 
Sbjct:   104 TRGGQTCLHYAAGKGRLSIVQ-LLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLIS 162

Query:   149 KNPSLLGIRGSKNMPPLYFAALFGQTD 175
             +   L     S    PL+FA   G  D
Sbjct:   163 QRAPL-NTSDSYGFTPLHFALAEGHPD 188

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005838 "proteasome regulatory particle" evidence=ISO

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=NAS

TAIR|locus:2173767 EMB506 "embryo defective 506" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 0.00070, P = 0.00070
 Identities = 47/196 (23%), Positives = 88/196 (44%)

Query:    21 QVSEFVESEKSSLTRVLKQPSLHLLSGKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDY 80
             +V + +E E+  + +  ++P+L ++S K  K        L   AL  +++ ++ L E   
Sbjct:   124 EVEQLLEPEERVILQQNEKPNLKMISTKSWKP-------LQTLALSMQIQLMDNLIEN-- 174

Query:    81 RSIICAAITEGHQTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGA 139
               +    + + +QT LH A   K+ + +  LL    +P    LQD +G     +A  VGA
Sbjct:   175 -GLDIDDVDKDNQTALHKAIIGKKEAVISHLLRKGANPH---LQDRDGAAPIHYAVQVGA 230

Query:   140 VDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTD-TASFLFHKSEKELPTEDRKVIFI 198
             +    L+ K N  +  +  ++   PL+ A      D T   L + ++K   T+D K+   
Sbjct:   231 LQTVKLLFKYNVDV-NVADNEGWTPLHIAVQSRNRDITKILLTNGADKTRRTKDGKLALD 289

Query:   199 TSVDTGLYGKYQDIFK 214
              ++  G   K  D+ K
Sbjct:   290 LALCFGRDFKSYDLVK 305

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0010027 "thylakoid membrane organization" evidence=RCA

TAIR|locus:2063804 AT2G03430 "AT2G03430" [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 0.00088, P = 0.00088
 Identities = 39/138 (28%), Positives = 63/138 (45%)

Query:    57 RLLLYKAALKGEMKEIEGLFEKDY-RSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFM 115
             R LL+ AA  G  + ++ L   D  +++I +   EG    LH A        V+ LLT  
Sbjct:    48 RSLLHVAASFGHSQIVKLLSSSDEAKTVINSKDDEGWAP-LHSAASIGNAELVEVLLT-- 104

Query:   116 DPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTD 175
                D+  ++  G TA  +AA+ G ++IA L+L     +  I       PL+ AA  G+ +
Sbjct:   105 RGADVNAKNNGGRTALHYAASKGRLEIAQLLLTHGAKI-NITDKVGCTPLHRAASVGKLE 163

Query:   176 TASFLFHKSEKELPTEDR 193
                FL  +   E+   D+
Sbjct:   164 VCEFLIEEGA-EIDATDK 180

GO:0008150 "biological_process" evidence=ND

GO:0005618 "cell wall" evidence=IDA

GO:0000724 "double-strand break repair via homologous recombination" evidence=RCA

GO:0006259 "DNA metabolic process" evidence=RCA

GO:0007059 "chromosome segregation" evidence=RCA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0007126 "meiosis" evidence=RCA

GO:0007129 "synapsis" evidence=RCA

GO:0007131 "reciprocal meiotic recombination" evidence=RCA

GO:0007140 "male meiosis" evidence=RCA

GO:0010332 "response to gamma radiation" evidence=RCA

GO:0016444 "somatic cell DNA recombination" evidence=RCA

GO:0032204 "regulation of telomere maintenance" evidence=RCA

GO:0032504 "multicellular organism reproduction" evidence=RCA

GO:0033044 "regulation of chromosome organization" evidence=RCA

GO:0042023 "DNA endoreduplication" evidence=RCA

GO:0042138 "meiotic DNA double-strand break formation" evidence=RCA

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0043247 "telomere maintenance in response to DNA damage" evidence=RCA

GO:0043248 "proteasome assembly" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

UNIPROTKB|E5RIS1 ANKRD6 "Ankyrin repeat domain-containing protein 6" [Homo sapiens (taxid:9606)]

 Score = 88 (36.0 bits), Expect = 0.00099, P = 0.00099
 Identities = 33/99 (33%), Positives = 48/99 (48%)

Query:    55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTF 114
             SERLL+  AA KG+ + +  L  K  R     A+T+  +T LH+A        VQ LL  
Sbjct:    11 SERLLV--AAYKGQTENVVQLINKGAR----VAVTKHGRTPLHLAANKGHLPVVQILLKA 64

Query:   115 MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSL 153
                 DL +QD+   TA   A  VG  +I   ++ +  +L
Sbjct:    65 GC--DLDVQDDGDQTALHRATVVGNTEIIAALIHEGCAL 101

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:2000096 "positive regulation of Wnt receptor signaling pathway, planar cell polarity pathway" evidence=IEA

UNIPROTKB|E5RJ45 ANKRD6 "Ankyrin repeat domain-containing protein 6" [Homo sapiens (taxid:9606)]

 Score = 88 (36.0 bits), Expect = 0.00099, P = 0.00099
 Identities = 33/99 (33%), Positives = 48/99 (48%)

Query:    55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTF 114
             SERLL+  AA KG+ + +  L  K  R     A+T+  +T LH+A        VQ LL  
Sbjct:    11 SERLLV--AAYKGQTENVVQLINKGAR----VAVTKHGRTPLHLAANKGHLPVVQILLKA 64

Query:   115 MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSL 153
                 DL +QD+   TA   A  VG  +I   ++ +  +L
Sbjct:    65 GC--DLDVQDDGDQTALHRATVVGNTEIIAALIHEGCAL 101


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      215       215   0.00087  112 3  11 22  0.36    33
                                                     32  0.50    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  148 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.41u 0.17s 18.58t   Elapsed:  00:00:01
  Total cpu time:  18.41u 0.17s 18.58t   Elapsed:  00:00:01
  Start:  Sat May 11 03:07:20 2013   End:  Sat May 11 03:07:21 2013

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:2000096 "positive regulation of Wnt receptor signaling pathway, planar cell polarity pathway" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	215
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-10
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	8e-06
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-05
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	8e-05
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-04
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.002
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.003

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 55.9 bits (135), Expect = 2e-10
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)

Query: 59  LLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPE 118
            L+ AA  G ++ ++ L E    + + A   +G +T LH+A        V+ LL      
Sbjct: 10  PLHLAASNGHLEVVKLLLENG--ADVNAKDNDG-RTPLHLAAKNGHLEIVKLLLEKGA-- 64

Query: 119 DLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTAS 178
           D+  +D++GNT    AA  G +D+  L+LK   + +  R      PL+ AA  G  +   
Sbjct: 65  DVNARDKDGNTPLHLAARNGNLDVVKLLLKHG-ADVNARDKDGRTPLHLAAKNGHLEVVK 123

Query: 179 FL 180
            L
Sbjct: 124 LL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 44.8 bits (105), Expect = 8e-06
 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 88  ITEGHQTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDIANLM 146
            T  H   L+           + LL    D +   L+DE+GNT   +AA  G  DI  L+
Sbjct: 107 DTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELL 166

Query: 147 LKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE 185
           L+        R S  +  L  AA  G+ +    L  K  
Sbjct: 167 LEAGADPN-SRNSYGVTALDPAAKNGRIELVKLLLDKGL 204

Length = 235

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 123 QDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
           +DE+G T    AA+ G +++  L+L+    +   + +    PL+ AA  G  +    L
Sbjct: 3   RDEDGRTPLHLAASNGHLEVVKLLLENGADVN-AKDNDGRTPLHLAAKNGHLEIVKLL 59

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 40.4 bits (95), Expect = 8e-05
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED 119
           L+ AA  G ++ ++ L EK        A  +   T LH+A        V+ LL      D
Sbjct: 44  LHLAAKNGHLEIVKLLLEKG---ADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGA--D 98

Query: 120 LMLQDENGNTAFCFAAAVGAVDIANLML 147
           +  +D++G T    AA  G +++  L+L
Sbjct: 99  VNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 9/95 (9%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGH-QTVLHVATGAKQTSFVQQLLTFMDPE 118
           L+ AA  G ++ ++ L EK       A +  G   T LH+A        V+ LL      
Sbjct: 1   LHLAAKNGNLELVKLLLEK------GADVNLGDTDTALHLAARNGNLEIVKLLLEHGA-- 52

Query: 119 DLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSL 153
           D+  +D++GNTA   AA  G ++I  L+L+    +
Sbjct: 53  DVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADI 87

Length = 91

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 79  DYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA 134
           ++  I   A      T LH+A        VQ LL      DL L+D +G TA   A
Sbjct: 3   EHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKP--GVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 96  LHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLG 155
           LH+A        V+ LL   +    +   +  +TA   AA  G ++I  L+L+    +  
Sbjct: 1   LHLAAKNGNLELVKLLL---EKGADVNLGDT-DTALHLAARNGNLEIVKLLLEHGADVN- 55

Query: 156 IRGSKNMPPLYFAALFGQTDTASFL 180
            +       L+ AA  G  +    L
Sbjct: 56  AKDKDGNTALHLAARNGNLEIVKLL 80

Length = 91

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 34.9 bits (81), Expect = 0.002
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 127 GNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
           G TA   AA  G +++   +L+K   +           L+ AA  G  +    L
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDIN-RTDEDGNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 34.6 bits (80), Expect = 0.003
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 115 MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFA 168
             P DL   D NGNT    AA  GA+++   +L K    L +R S  +  L  A
Sbjct: 4   HGPIDLNATDGNGNTPLHLAAKYGALELVQWLL-KPGVDLNLRDSDGLTALDLA 56

Length = 56

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	215
KOG4412	226	consensus 26S proteasome regulatory complex, subun	100.0
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.97
PHA02791	284	ankyrin-like protein; Provisional	99.96
PHA02791	284	ankyrin-like protein; Provisional	99.96
PHA02875	413	ankyrin repeat protein; Provisional	99.96
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.95
PHA02875	413	ankyrin repeat protein; Provisional	99.94
PHA02859	209	ankyrin repeat protein; Provisional	99.94
PHA02878	477	ankyrin repeat protein; Provisional	99.94
PHA02874	434	ankyrin repeat protein; Provisional	99.94
PHA03100	480	ankyrin repeat protein; Provisional	99.93
PHA02874	434	ankyrin repeat protein; Provisional	99.93
PHA03100	480	ankyrin repeat protein; Provisional	99.93
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.93
PHA02878	477	ankyrin repeat protein; Provisional	99.93
KOG0510	929	consensus Ankyrin repeat protein [General function	99.92
KOG0508	615	consensus Ankyrin repeat protein [General function	99.92
PHA02859	209	ankyrin repeat protein; Provisional	99.92
PHA02946	446	ankyin-like protein; Provisional	99.91
PHA02989	494	ankyrin repeat protein; Provisional	99.91
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.91
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.91
KOG0508	615	consensus Ankyrin repeat protein [General function	99.91
PHA03095	471	ankyrin-like protein; Provisional	99.91
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.91
PHA02795	437	ankyrin-like protein; Provisional	99.9
PHA02743	166	Viral ankyrin protein; Provisional	99.9
PHA02798	489	ankyrin-like protein; Provisional	99.9
KOG0514	452	consensus Ankyrin repeat protein [General function	99.9
PHA02741	169	hypothetical protein; Provisional	99.9
PHA03095	471	ankyrin-like protein; Provisional	99.9
PHA02946	446	ankyin-like protein; Provisional	99.9
PHA02876	682	ankyrin repeat protein; Provisional	99.89
PHA02917	661	ankyrin-like protein; Provisional	99.89
PHA02798	489	ankyrin-like protein; Provisional	99.89
PHA02741	169	hypothetical protein; Provisional	99.88
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.88
PHA02876	682	ankyrin repeat protein; Provisional	99.88
PHA02736	154	Viral ankyrin protein; Provisional	99.88
KOG0510	929	consensus Ankyrin repeat protein [General function	99.88
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.88
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.87
PHA02884	300	ankyrin repeat protein; Provisional	99.87
PHA02989	494	ankyrin repeat protein; Provisional	99.87
PHA02743	166	Viral ankyrin protein; Provisional	99.85
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.85
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.85
PHA02795	437	ankyrin-like protein; Provisional	99.84
PHA02884	300	ankyrin repeat protein; Provisional	99.83
PHA02736	154	Viral ankyrin protein; Provisional	99.83
PHA02730	672	ankyrin-like protein; Provisional	99.82
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.81
PHA02917	661	ankyrin-like protein; Provisional	99.81
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.81
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.81
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.8
KOG0514	452	consensus Ankyrin repeat protein [General function	99.8
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.8
PHA02730	672	ankyrin-like protein; Provisional	99.8
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.79
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.79
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.78
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.78
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.78
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.78
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.78
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.76
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.76
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.73
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.73
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.72
PHA02792	631	ankyrin-like protein; Provisional	99.71
PHA02792	631	ankyrin-like protein; Provisional	99.68
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.64
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.62
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.61
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.6
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.59
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.57
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.55
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.54
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.54
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.54
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.53
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.48
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.44
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.43
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.37
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	99.14
KOG0783	1267	consensus Uncharacterized conserved protein, conta	99.13
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	99.07
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	99.07
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.99
KOG0522	560	consensus Ankyrin repeat protein [General function	98.9
PF13606	30	Ank_3: Ankyrin repeat	98.88
PF13606	30	Ank_3: Ankyrin repeat	98.83
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.83
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.81
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.81
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.8
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.79
KOG0522	560	consensus Ankyrin repeat protein [General function	98.77
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.75
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.72
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.66
KOG0520	975	consensus Uncharacterized conserved protein, conta	98.46
KOG2384	223	consensus Major histocompatibility complex protein	98.42
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.37
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.37
KOG0511	516	consensus Ankyrin repeat protein [General function	98.37
KOG0511	516	consensus Ankyrin repeat protein [General function	98.13
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.11
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.89
KOG2384	223	consensus Major histocompatibility complex protein	97.88
KOG2505	591	consensus Ankyrin repeat protein [General function	97.32
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	97.08
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	97.05
KOG2505	591	consensus Ankyrin repeat protein [General function	96.67
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.87
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	95.26
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	94.18
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	93.56
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	92.23
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	91.05

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.1e-34  Score=195.34  Aligned_cols=160  Identities=19%  Similarity=0.208  Sum_probs=144.0

Q ss_pred             ccCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhh
Q 037194           52 LCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAF  131 (215)
Q Consensus        52 ~~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l  131 (215)
                      ..++|++|||||+..|+.+++.+|+...  ......+|..||||||+|+..|+.++|+-|+.+. ++|+|..+..|.|+|
T Consensus        34 ~dqD~Rt~LHwa~S~g~~eiv~fLlsq~--nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~-~advna~tn~G~T~L  110 (226)
T KOG4412|consen   34 DDQDGRTPLHWACSFGHVEIVYFLLSQP--NVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRS-GADVNATTNGGQTCL  110 (226)
T ss_pred             ccccCCceeeeeeecCchhHHHHHHhcC--CCCCCCccccCCchhhhhhhcCcHHHHHHHhcCC-CCCcceecCCCccee
Confidence            3358999999999999999999999743  3333356899999999999999999999999984 899999999999999


Q ss_pred             HHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHH
Q 037194          132 CFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQ  210 (215)
Q Consensus       132 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~  210 (215)
                      |||+..|..+++++|+++|+. ++.+|..|.||||.|+..|..+++++|+..|+ .+..+..|.||+|-|+-.++.+++.
T Consensus       111 HyAagK~r~eIaqlLle~ga~-i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~  189 (226)
T KOG4412|consen  111 HYAAGKGRLEIAQLLLEKGAL-IRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAV  189 (226)
T ss_pred             hhhhcCChhhHHHHHHhcCCC-CcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHH
Confidence            999999999999999999998 89999999999999999999999999999999 7777888888888777778999998


Q ss_pred             HhhcC
Q 037194          211 DIFKR  215 (215)
Q Consensus       211 ~ll~~  215 (215)
                      .|+++
T Consensus       190 lLV~~  194 (226)
T KOG4412|consen  190 LLVRA  194 (226)
T ss_pred             HHHHh
Confidence            88753

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=4.2e-31  Score=179.29  Aligned_cols=154  Identities=18%  Similarity=0.167  Sum_probs=140.1

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      ++.+.++.......++.+++.. +.......|.+|+|||||||+.|+.+++.+|+.. ++..+|.+|..||||||+|+..
T Consensus         5 ~~~~~~~~~~~~~kveel~~s~-~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq-~nv~~ddkDdaGWtPlhia~s~   82 (226)
T KOG4412|consen    5 SLGKAICENCEEFKVEELIQSD-PKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQ-PNVKPDDKDDAGWTPLHIAASN   82 (226)
T ss_pred             chHHHHHhhchHHHHHHHHhcC-hhhhhccccccCCceeeeeeecCchhHHHHHHhc-CCCCCCCccccCCchhhhhhhc
Confidence            5567778888888899999988 7666656677999999999999999999999974 4888999999999999999999


Q ss_pred             CcHHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          138 GAVDIANLMLKK-NPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       138 ~~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      |+.++|+.|+.. +++ ++..+..|.|+||||+.+|+.+++++|+++|+ ...++..+.+|+|.|+.-|...++++|+.
T Consensus        83 g~~evVk~Ll~r~~ad-vna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~  160 (226)
T KOG4412|consen   83 GNDEVVKELLNRSGAD-VNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLIS  160 (226)
T ss_pred             CcHHHHHHHhcCCCCC-cceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHh
Confidence            999999999998 788 89999999999999999999999999999999 88888889999999999999999999985

>PHA02791 ankyrin-like protein; Provisional

Probab=99.96  E-value=1.5e-28  Score=186.02  Aligned_cols=153  Identities=18%  Similarity=0.154  Sum_probs=100.5

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCc-hhhHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGN-TAFCF  133 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~-t~l~~  133 (215)
                      +|+||||.|+..|+.++++.|+..+ ...  ..++..|+||||+|+..|+.+++++|++.  +++++.++..|+ ||||+
T Consensus        60 d~~TpLh~Aa~~g~~eiV~lLL~~G-adv--n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~--gadin~~~~~g~~TpL~~  134 (284)
T PHA02791         60 ENEFPLHQAATLEDTKIVKILLFSG-MDD--SQFDDKGNTALYYAVDSGNMQTVKLFVKK--NWRLMFYGKTGWKTSFYH  134 (284)
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCC-CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCcCccCCCCCcHHHHH
Confidence            4567777777777777777777666 332  23566677777777777777777777776  667766666664 67777


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCC-CCchHHHHHHhcCchhHHHH
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTE-DRKVIFITSVDTGLYGKYQD  211 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~-~~~~~~~~a~~~~~~~~~~~  211 (215)
                      |+..|+.+++++|++.++...+.  ..|.||||+|+..|+.+++++|+++|+ ....+. +.+|++|.|+..|+.++++.
T Consensus       135 Aa~~g~~eivk~LL~~~~~~~d~--~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~l  212 (284)
T PHA02791        135 AVMLNDVSIVSYFLSEIPSTFDL--AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQA  212 (284)
T ss_pred             HHHcCCHHHHHHHHhcCCccccc--ccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence            77777777777777765442111  236777777777777777777777776 333333 33444777777777777777


Q ss_pred             hhc
Q 037194          212 IFK  214 (215)
Q Consensus       212 ll~  214 (215)
                      ||+
T Consensus       213 Ll~  215 (284)
T PHA02791        213 LFK  215 (284)
T ss_pred             HHH
Confidence            765

>PHA02791 ankyrin-like protein; Provisional

Probab=99.96  E-value=6.1e-28  Score=182.63  Aligned_cols=155  Identities=19%  Similarity=0.199  Sum_probs=137.1

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      ...|+||||+|+..|+.++++.|++.+ ....    ...+.||||+|+..|+.+++++|+..  |++++.+|..|+||||
T Consensus        27 D~~G~TpLh~Aa~~g~~eiv~~Ll~~g-a~~n----~~d~~TpLh~Aa~~g~~eiV~lLL~~--Gadvn~~d~~G~TpLh   99 (284)
T PHA02791         27 DVHGHSALYYAIADNNVRLVCTLLNAG-ALKN----LLENEFPLHQAATLEDTKIVKILLFS--GMDDSQFDDKGNTALY   99 (284)
T ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHCc-CCCc----CCCCCCHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHH
Confidence            357899999999999999999999998 4332    23478999999999999999999998  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCC-CHHHHHHHhCCHHHHHHHhhcCCCCCCCCCCchHHHHHHhcCchhHHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNM-PPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQD  211 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~-t~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  211 (215)
                      +|+..|+.+++++|++.|++ ++..+..|+ ||||+|+..|+.+++++|+++++...+...+.||+|.|+..|+.++++.
T Consensus       100 ~Aa~~g~~eivk~Ll~~gad-in~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~l  178 (284)
T PHA02791        100 YAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMIL  178 (284)
T ss_pred             HHHHcCCHHHHHHHHHCCCC-cCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHH
Confidence            99999999999999999999 688888885 8999999999999999999987633333357899999999999999999


Q ss_pred             hhcC
Q 037194          212 IFKR  215 (215)
Q Consensus       212 ll~~  215 (215)
                      ||++
T Consensus       179 LL~~  182 (284)
T PHA02791        179 LLDY  182 (284)
T ss_pred             HHHC
Confidence            9864

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.96  E-value=2.4e-27  Score=190.50  Aligned_cols=157  Identities=17%  Similarity=0.195  Sum_probs=140.2

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..+.+|||.|+..|+.+.++.|++.+ ..... ..+..|.||||+|+..|+.+++++|++.  |++++.++..|.||||+
T Consensus        66 ~~~~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~-~~~~~g~tpL~~A~~~~~~~iv~~Ll~~--gad~~~~~~~g~tpLh~  141 (413)
T PHA02875         66 PDIESELHDAVEEGDVKAVEELLDLG-KFADD-VFYKDGMTPLHLATILKKLDIMKLLIAR--GADPDIPNTDKFSPLHL  141 (413)
T ss_pred             CCcccHHHHHHHCCCHHHHHHHHHcC-Ccccc-cccCCCCCHHHHHHHhCCHHHHHHHHhC--CCCCCCCCCCCCCHHHH
Confidence            45678999999999999999999987 44332 3466799999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC--CCCCCCCCchHHHHHHhcCchhHHHH
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE--KELPTEDRKVIFITSVDTGLYGKYQD  211 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~  211 (215)
                      |+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|++.|+  ......++.++++.|+..++.+++++
T Consensus       142 A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~  220 (413)
T PHA02875        142 AVMMGDIKGIELLIDHKAC-LDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRL  220 (413)
T ss_pred             HHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHH
Confidence            9999999999999999999 79999999999999999999999999999999  33445556789998889999999999


Q ss_pred             hhcC
Q 037194          212 IFKR  215 (215)
Q Consensus       212 ll~~  215 (215)
                      ||++
T Consensus       221 Ll~~  224 (413)
T PHA02875        221 FIKR  224 (413)
T ss_pred             HHHC
Confidence            9864

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.95  E-value=7.4e-28  Score=191.13  Aligned_cols=156  Identities=21%  Similarity=0.168  Sum_probs=141.4

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      .+.|.++||||+..++++++++|++++ +.... .....+.||||||+++|+..+|++|++.  |+|++.+|..|.+|+|
T Consensus        75 D~~g~tlLHWAAiNNrl~v~r~li~~g-advn~-~gG~l~stPLHWAar~G~~~vv~lLlqh--GAdpt~~D~~G~~~lH  150 (600)
T KOG0509|consen   75 DREGVTLLHWAAINNRLDVARYLISHG-ADVNA-IGGVLGSTPLHWAARNGHISVVDLLLQH--GADPTLKDKQGLTPLH  150 (600)
T ss_pred             CcCCccceeHHHHcCcHHHHHHHHHcC-CCccc-cCCCCCCCcchHHHHcCcHHHHHHHHHc--CCCCceecCCCCcHHH
Confidence            347889999999999999999999999 55443 4457789999999999999999999999  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC--CCCCCCCCchHHHHHHhcCchhHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE--KELPTEDRKVIFITSVDTGLYGKYQ  210 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~  210 (215)
                      .|++.++.-.+.+|+.++++ ++.+|.+|+||||+|+.+|+...+..|++.++  ...++..|+||+|.|+.+|...++.
T Consensus       151 la~~~~~~~~vayll~~~~d-~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~  229 (600)
T KOG0509|consen  151 LAAQFGHTALVAYLLSKGAD-IDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVK  229 (600)
T ss_pred             HHHHhCchHHHHHHHHhccc-CCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEe
Confidence            99999999999999999998 89999999999999999999887999999998  4456688999999999999988887


Q ss_pred             Hhh
Q 037194          211 DIF  213 (215)
Q Consensus       211 ~ll  213 (215)
                      .|+
T Consensus       230 Ll~  232 (600)
T KOG0509|consen  230 LLL  232 (600)
T ss_pred             hhh
Confidence            443

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.94  E-value=5.1e-26  Score=182.79  Aligned_cols=156  Identities=15%  Similarity=0.165  Sum_probs=140.5

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCc-ccccCCCchhhH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDL-MLQDENGNTAFC  132 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~-~~~~~~g~t~l~  132 (215)
                      ..|.||||.|+..|+.++++.|++.| ...  ...+..+.+|||+|+..|+.+++++|++.  +.+. +..+..|.||||
T Consensus        33 ~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~--~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~tpL~  107 (413)
T PHA02875         33 YDGISPIKLAMKFRDSEAIKLLMKHG-AIP--DVKYPDIESELHDAVEEGDVKAVEELLDL--GKFADDVFYKDGMTPLH  107 (413)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCC-CCc--cccCCCcccHHHHHHHCCCHHHHHHHHHc--CCcccccccCCCCCHHH
Confidence            47889999999999999999999998 433  23567889999999999999999999998  6654 345678999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQD  211 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~  211 (215)
                      +|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..|.||+|.|+..|..+++++
T Consensus       108 ~A~~~~~~~iv~~Ll~~gad-~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~  186 (413)
T PHA02875        108 LATILKKLDIMKLLIARGAD-PDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKM  186 (413)
T ss_pred             HHHHhCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence            99999999999999999999 79999999999999999999999999999998 67778889999999999999999999


Q ss_pred             hhcC
Q 037194          212 IFKR  215 (215)
Q Consensus       212 ll~~  215 (215)
                      ||++
T Consensus       187 Ll~~  190 (413)
T PHA02875        187 LLDS  190 (413)
T ss_pred             HHhC
Confidence            9863

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.94  E-value=2.2e-25  Score=162.83  Aligned_cols=149  Identities=9%  Similarity=0.025  Sum_probs=81.5

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcC--CHHHHHHHHHccCCCCccccc-CCCchhhHH
Q 037194           57 RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAK--QTSFVQQLLTFMDPEDLMLQD-ENGNTAFCF  133 (215)
Q Consensus        57 ~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g--~~~~v~~Ll~~~~~~~~~~~~-~~g~t~l~~  133 (215)
                      ++||+.|+..|+.+.|+.|++..      ...+..|.||||+|+..+  +.+++++|++.  |++++.++ ..|+||||+
T Consensus        22 ~~pL~~A~~~~~~~~vk~Li~~~------n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~--gadvn~~~~~~g~TpLh~   93 (209)
T PHA02859         22 CNPLFYYVEKDDIEGVKKWIKFV------NDCNDLYETPIFSCLEKDKVNVEILKFLIEN--GADVNFKTRDNNLSALHH   93 (209)
T ss_pred             CcHHHHHHHhCcHHHHHHHHHhh------hccCccCCCHHHHHHHcCCCCHHHHHHHHHC--CCCCCccCCCCCCCHHHH
Confidence            45666666666666666665432      123455666666665533  55666666665  56665554 355666665


Q ss_pred             HHhc---CcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH--hCCHHHHHHHhhcCC-CCCCCCCCchHHH-HHHhcCch
Q 037194          134 AAAV---GAVDIANLMLKKNPSLLGIRGSKNMPPLYFAAL--FGQTDTASFLFHKSE-KELPTEDRKVIFI-TSVDTGLY  206 (215)
Q Consensus       134 a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~--~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~-~a~~~~~~  206 (215)
                      |+..   ++.+++++|++.|++ ++..|..|.||||+|+.  .++.+++++|++.|+ ....+..+.+++| ++...+..
T Consensus        94 a~~~~~~~~~eiv~~Ll~~gad-in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~  172 (209)
T PHA02859         94 YLSFNKNVEPEILKILIDSGSS-ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDK  172 (209)
T ss_pred             HHHhCccccHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCH
Confidence            5432   245566666666665 45566666666665544  245566666666665 3344444555554 34445555


Q ss_pred             hHHHHhhc
Q 037194          207 GKYQDIFK  214 (215)
Q Consensus       207 ~~~~~ll~  214 (215)
                      +++.+|++
T Consensus       173 ~iv~~Ll~  180 (209)
T PHA02859        173 KIFDFLTS  180 (209)
T ss_pred             HHHHHHHH
Confidence            55555553

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.94  E-value=1e-25  Score=184.01  Aligned_cols=97  Identities=19%  Similarity=0.249  Sum_probs=49.0

Q ss_pred             CCCcccccCC-CchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCc
Q 037194          117 PEDLMLQDEN-GNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRK  194 (215)
Q Consensus       117 ~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~  194 (215)
                      |++++.++.. |.||||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|++.|+ ....+..|.
T Consensus       157 gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~  235 (477)
T PHA02878        157 GADINMKDRHKGNTALHYATENKDQRLTELLLSYGAN-VNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGN  235 (477)
T ss_pred             CCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCC
Confidence            3444444444 55555555555555555555555555 45555555555555555555555555555555 333444444


Q ss_pred             hHHHHHHhc-CchhHHHHhhc
Q 037194          195 VIFITSVDT-GLYGKYQDIFK  214 (215)
Q Consensus       195 ~~~~~a~~~-~~~~~~~~ll~  214 (215)
                      +|+|.|+.. +..+++++||+
T Consensus       236 TpLh~A~~~~~~~~iv~~Ll~  256 (477)
T PHA02878        236 TPLHISVGYCKDYDILKLLLE  256 (477)
T ss_pred             CHHHHHHHhcCCHHHHHHHHH
Confidence            444444432 34455555543

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.94  E-value=1.3e-25  Score=181.42  Aligned_cols=156  Identities=15%  Similarity=0.179  Sum_probs=81.4

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccC------------------
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMD------------------  116 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~------------------  116 (215)
                      .|.||||.|+..|+.+++++|++.| ....  ..+..|.+|||.|+..|+.+++++|++.+.                  
T Consensus        34 ~~~tpL~~A~~~g~~~iv~~Ll~~G-a~~n--~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~l  110 (434)
T PHA02874         34 ETTTPLIDAIRSGDAKIVELFIKHG-ADIN--HINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTI  110 (434)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCC-CCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHH
Confidence            3445555555555555555555555 2221  234445555555555555555555554310                  


Q ss_pred             ---CCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCC
Q 037194          117 ---PEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTED  192 (215)
Q Consensus       117 ---~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~  192 (215)
                         |.+++.++..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..
T Consensus       111 l~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~  189 (434)
T PHA02874        111 LDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD-VNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNN  189 (434)
T ss_pred             HHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCC
Confidence               123344455555555555555555555555555555 45555555555555555555555555555555 3344444


Q ss_pred             CchHHHHHHhcCchhHHHHhhc
Q 037194          193 RKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       193 ~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      +.+|+|.|+..|..+++++|++
T Consensus       190 g~tpL~~A~~~g~~~iv~~Ll~  211 (434)
T PHA02874        190 GESPLHNAAEYGDYACIKLLID  211 (434)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHh
Confidence            5555555555555555555543

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.93  E-value=7.7e-25  Score=179.19  Aligned_cols=154  Identities=17%  Similarity=0.195  Sum_probs=89.2

Q ss_pred             cccHHHHHHHHcC--CHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCC-----
Q 037194           55 SERLLLYKAALKG--EMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENG-----  127 (215)
Q Consensus        55 ~g~~~L~~a~~~g--~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g-----  127 (215)
                      .|.++||.|+..|  +.++++.|++.| ....  ..+..|.||||+|+..|+.+++++|++.  |++++..+..|     
T Consensus       140 ~g~t~L~~A~~~~~~~~~iv~~Ll~~g-~din--~~d~~g~tpL~~A~~~~~~~iv~~Ll~~--ga~~~~~~~~~~~~~~  214 (480)
T PHA03100        140 DGENLLHLYLESNKIDLKILKLLIDKG-VDIN--AKNRYGYTPLHIAVEKGNIDVIKFLLDN--GADINAGDIETLLFTI  214 (480)
T ss_pred             CCCcHHHHHHHcCCChHHHHHHHHHCC-CCcc--cccCCCCCHHHHHHHhCCHHHHHHHHHc--CCCccCCCCCCCcHHH
Confidence            3445555555555  555555555554 2221  2344555555555555555555555555  55555555555     


Q ss_pred             -chhhHHHHhcCc--HHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhc
Q 037194          128 -NTAFCFAAAVGA--VDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDT  203 (215)
Q Consensus       128 -~t~l~~a~~~~~--~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~  203 (215)
                       .||||+|+..++  .+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..|.+|++.|+..
T Consensus       215 ~~t~l~~a~~~~~~~~~iv~~Ll~~g~d-in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~  293 (480)
T PHA03100        215 FETPLHIAACYNEITLEVVNYLLSYGVP-INIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILN  293 (480)
T ss_pred             HHhHHHHHHHhCcCcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHh
Confidence             555555555555  5566666666555 45666666777777777777777777777666 555556666666666666


Q ss_pred             CchhHHHHhhc
Q 037194          204 GLYGKYQDIFK  214 (215)
Q Consensus       204 ~~~~~~~~ll~  214 (215)
                      +..+++++||+
T Consensus       294 ~~~~iv~~Ll~  304 (480)
T PHA03100        294 NNKEIFKLLLN  304 (480)
T ss_pred             CCHHHHHHHHh
Confidence            66666666664

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.93  E-value=1.2e-24  Score=175.82  Aligned_cols=154  Identities=18%  Similarity=0.164  Sum_probs=117.6

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.||||+|+..|+.++++.|++.+ ...  ..++..|.||||+|+..|+.+++++|++.  |++++..+..|.||||+
T Consensus       122 ~~g~T~Lh~A~~~~~~~~v~~Ll~~g-ad~--n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~--g~~~n~~~~~g~tpL~~  196 (434)
T PHA02874        122 AELKTFLHYAIKKGDLESIKMLFEYG-ADV--NIEDDNGCYPIHIAIKHNFFDIIKLLLEK--GAYANVKDNNGESPLHN  196 (434)
T ss_pred             CCCccHHHHHHHCCCHHHHHHHHhCC-CCC--CCcCCCCCCHHHHHHHCCcHHHHHHHHHC--CCCCCCCCCCCCCHHHH
Confidence            56889999999999999999999998 443  24688899999999999999999999999  89999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCC-------------------------------CCCCCCCHHHHHHHhC-CHHHHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGI-------------------------------RGSKNMPPLYFAALFG-QTDTASFLF  181 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~-------------------------------~~~~g~t~l~~a~~~g-~~~~v~~Ll  181 (215)
                      |+..|+.+++++|++.|++ ++.                               .|..|.||||+|+..+ +.+++++|+
T Consensus       197 A~~~g~~~iv~~Ll~~g~~-i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll  275 (434)
T PHA02874        197 AAEYGDYACIKLLIDHGNH-IMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILL  275 (434)
T ss_pred             HHHcCCHHHHHHHHhCCCC-CcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHH
Confidence            9999999999999998876 344                               4445556666665544 456666666


Q ss_pred             hcCC-CCCCCCCCchHHHHHHhcC-chhHHHHhh
Q 037194          182 HKSE-KELPTEDRKVIFITSVDTG-LYGKYQDIF  213 (215)
Q Consensus       182 ~~~~-~~~~~~~~~~~~~~a~~~~-~~~~~~~ll  213 (215)
                      ++|+ ....+..|.+|++.|+..+ ..++++.|+
T Consensus       276 ~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll  309 (434)
T PHA02874        276 YHKADISIKDNKGENPIDTAFKYINKDPVIKDII  309 (434)
T ss_pred             HCcCCCCCCCCCCCCHHHHHHHhCCccHHHHHHH
Confidence            6666 4445555555555555543 444444444

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.93  E-value=9.3e-25  Score=178.70  Aligned_cols=156  Identities=13%  Similarity=0.164  Sum_probs=134.3

Q ss_pred             CcccHHHHHHH--HcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcC--CHHHHHHHHHccCCCCcccccCCCch
Q 037194           54 CSERLLLYKAA--LKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAK--QTSFVQQLLTFMDPEDLMLQDENGNT  129 (215)
Q Consensus        54 ~~g~~~L~~a~--~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g--~~~~v~~Ll~~~~~~~~~~~~~~g~t  129 (215)
                      ..|.||||+|+  ..|+.++++.|++.| ...  ...+..|.||||+|+..|  +.+++++|++.  |++++.++..|.|
T Consensus       104 ~~g~tpL~~A~~~~~~~~~iv~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~--g~din~~d~~g~t  178 (480)
T PHA03100        104 NNGITPLLYAISKKSNSYSIVEYLLDNG-ANV--NIKNSDGENLLHLYLESNKIDLKILKLLIDK--GVDINAKNRYGYT  178 (480)
T ss_pred             CCCCchhhHHHhcccChHHHHHHHHHcC-CCC--CccCCCCCcHHHHHHHcCCChHHHHHHHHHC--CCCcccccCCCCC
Confidence            46789999999  889999999999988 433  246778899999999999  89999999998  8888888889999


Q ss_pred             hhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCC------CCHHHHHHHhCC--HHHHHHHhhcCC-CCCCCCCCchHHHHH
Q 037194          130 AFCFAAAVGAVDIANLMLKKNPSLLGIRGSKN------MPPLYFAALFGQ--TDTASFLFHKSE-KELPTEDRKVIFITS  200 (215)
Q Consensus       130 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g------~t~l~~a~~~g~--~~~v~~Ll~~~~-~~~~~~~~~~~~~~a  200 (215)
                      |||+|+..|+.+++++|++.|++ ++..+..|      .||||+|+..|+  .+++++|++.|+ ....+..|.+|+|.|
T Consensus       179 pL~~A~~~~~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A  257 (480)
T PHA03100        179 PLHIAVEKGNIDVIKFLLDNGAD-INAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYA  257 (480)
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCC-ccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence            99999999999999999999988 67777777      889999999998  999999999988 566677888899999


Q ss_pred             HhcCchhHHHHhhcC
Q 037194          201 VDTGLYGKYQDIFKR  215 (215)
Q Consensus       201 ~~~~~~~~~~~ll~~  215 (215)
                      +..+..+++++||++
T Consensus       258 ~~~~~~~iv~~Ll~~  272 (480)
T PHA03100        258 VYNNNPEFVKYLLDL  272 (480)
T ss_pred             HHcCCHHHHHHHHHc
Confidence            899999999998863

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.93  E-value=5.4e-25  Score=174.98  Aligned_cols=151  Identities=20%  Similarity=0.308  Sum_probs=135.2

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCccccc-CCCchhhHHHHh
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQD-ENGNTAFCFAAA  136 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~l~~a~~  136 (215)
                      ..+..|+..|.++.++.+++.. ...+. ..|..|.++||||+.+++.+++++|+++  |+++|..+ ..+.||||||++
T Consensus        46 ~~~v~A~q~G~l~~v~~lve~~-g~~v~-~~D~~g~tlLHWAAiNNrl~v~r~li~~--gadvn~~gG~l~stPLHWAar  121 (600)
T KOG0509|consen   46 DDIVKATQYGELETVKELVESE-GESVN-NPDREGVTLLHWAAINNRLDVARYLISH--GADVNAIGGVLGSTPLHWAAR  121 (600)
T ss_pred             hhhhhHhhcchHHHHHHHHhhc-CcCCC-CCCcCCccceeHHHHcCcHHHHHHHHHc--CCCccccCCCCCCCcchHHHH
Confidence            4589999999999999999993 23333 4678999999999999999999999999  99999988 678999999999


Q ss_pred             cCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          137 VGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       137 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      +|+..+|++|++.|++ +..+|..|.+|+|.|++.|+.-+|-+|+.+++ .+.+|.+|.||++.|+..|....+..||
T Consensus       122 ~G~~~vv~lLlqhGAd-pt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL  198 (600)
T KOG0509|consen  122 NGHISVVDLLLQHGAD-PTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLL  198 (600)
T ss_pred             cCcHHHHHHHHHcCCC-CceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHH
Confidence            9999999999999999 89999999999999999999999999999999 8888888888888887877766555555

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.93  E-value=1.7e-24  Score=176.86  Aligned_cols=151  Identities=14%  Similarity=0.105  Sum_probs=132.3

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .|+||||+|+..|+.++++.|++.| ...  ...+..|.||||+|+..|+.+++++|++.  |++++.+|..|.||||+|
T Consensus       167 ~g~tpLh~A~~~~~~~iv~~Ll~~g-ad~--n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~--ga~in~~d~~g~TpLh~A  241 (477)
T PHA02878        167 KGNTALHYATENKDQRLTELLLSYG-ANV--NIPDKTNNSPLHHAVKHYNKPIVHILLEN--GASTDARDKCGNTPLHIS  241 (477)
T ss_pred             CCCCHHHHHHhCCCHHHHHHHHHCC-CCC--CCcCCCCCCHHHHHHHhCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHH
Confidence            3899999999999999999999998 544  34788999999999999999999999999  999999999999999999


Q ss_pred             Hhc-CcHHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhc-CchhHHH
Q 037194          135 AAV-GAVDIANLMLKKNPSLLGIRGS-KNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDT-GLYGKYQ  210 (215)
Q Consensus       135 ~~~-~~~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~-~~~~~~~  210 (215)
                      +.. ++.+++++|++.|++ ++..+. .|.||||+|  .++.+++++|+++|+ ....+..|.||++.|+.. ...++.+
T Consensus       242 ~~~~~~~~iv~~Ll~~gad-vn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~  318 (477)
T PHA02878        242 VGYCKDYDILKLLLEHGVD-VNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGR  318 (477)
T ss_pred             HHhcCCHHHHHHHHHcCCC-CCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHH
Confidence            976 689999999999999 677765 799999999  567899999999999 777778888888888764 3455666


Q ss_pred             Hhh
Q 037194          211 DIF  213 (215)
Q Consensus       211 ~ll  213 (215)
                      .|+
T Consensus       319 ~li  321 (477)
T PHA02878        319 ILI  321 (477)
T ss_pred             HHH
Confidence            654

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.92  E-value=1.8e-24  Score=175.83  Aligned_cols=159  Identities=19%  Similarity=0.223  Sum_probs=140.5

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhh-------------hhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCc
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIIC-------------AAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDL  120 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~-------------~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~  120 (215)
                      ..+.+|||.|+..|+.++++.+|..+. ....             ...|.+|.||||+||..|+.++++.|+..  |+++
T Consensus       223 n~~~~pLhlAve~g~~e~lk~~L~n~~-~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~--Ga~I  299 (929)
T KOG0510|consen  223 NEKATPLHLAVEGGDIEMLKMCLQNGK-KIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGF--GASI  299 (929)
T ss_pred             CCCCcchhhhhhcCCHHHHHHHHhCcc-ccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHc--CCcc
Confidence            466899999999999999999998862 1111             12477899999999999999999999999  9999


Q ss_pred             ccccCCCchhhHHHHhcCcHHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CC---CCCCCCch
Q 037194          121 MLQDENGNTAFCFAAAVGAVDIANLMLK-KNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KE---LPTEDRKV  195 (215)
Q Consensus       121 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~---~~~~~~~~  195 (215)
                      +.++.++.||||.|+.+|+++.|+-|++ .+..+.+..|..|.||||+|++.||..+++.|+.+|+ ..   ..+.+|.|
T Consensus       300 ~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~T  379 (929)
T KOG0510|consen  300 NSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNT  379 (929)
T ss_pred             cccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCch
Confidence            9999999999999999999999999999 6666678899999999999999999999999999999 22   23788999


Q ss_pred             HHHHHHhcCchhHHHHhhcC
Q 037194          196 IFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       196 ~~~~a~~~~~~~~~~~ll~~  215 (215)
                      ++|.|+..|....+..||.+
T Consensus       380 aLH~Aa~~g~~~av~~Li~~  399 (929)
T KOG0510|consen  380 ALHLAAKYGNTSAVQKLISH  399 (929)
T ss_pred             hhhHHHHhccHHHHHHHHHc
Confidence            99999999999999988864

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.92  E-value=4.3e-25  Score=169.98  Aligned_cols=155  Identities=19%  Similarity=0.222  Sum_probs=138.3

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.+||--|+..|++++||.|+.++ .....  .+....|||..||.-|+.++|++|+++  ++|+++.|+.|.|.||+
T Consensus        82 IegappLWaAsaAGHl~vVk~L~~~g-a~VN~--tT~TNStPLraACfDG~leivKyLvE~--gad~~IanrhGhTcLmI  156 (615)
T KOG0508|consen   82 IEGAPPLWAASAAGHLEVVKLLLRRG-ASVND--TTRTNSTPLRAACFDGHLEIVKYLVEH--GADPEIANRHGHTCLMI  156 (615)
T ss_pred             cCCCchhhHHhccCcHHHHHHHHHhc-Ccccc--ccccCCccHHHHHhcchhHHHHHHHHc--CCCCcccccCCCeeEEe
Confidence            35668988888899999999999999 55544  345567999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCCCCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      |+..|+.+++++|++.|++ ++.++..|.|+||.++..|+.+++++|+.+|+....+..|-+|+..|...|+.++++.|+
T Consensus       157 a~ykGh~~I~qyLle~gAD-vn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iVe~L~  235 (615)
T KOG0508|consen  157 ACYKGHVDIAQYLLEQGAD-VNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIVERLL  235 (615)
T ss_pred             eeccCchHHHHHHHHhCCC-cchhcccCchHHHhhhhcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHHHHHh
Confidence            9999999999999999999 899999999999999999999999999999993333444777888888889999999987


Q ss_pred             c
Q 037194          214 K  214 (215)
Q Consensus       214 ~  214 (215)
                      +
T Consensus       236 ~  236 (615)
T KOG0508|consen  236 Q  236 (615)
T ss_pred             c
Confidence            3

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.92  E-value=3.6e-24  Score=156.42  Aligned_cols=145  Identities=12%  Similarity=0.091  Sum_probs=125.9

Q ss_pred             CcccHHHHHHHHcC--CHHHHHHHHhhcchhhhhhhcC-CCCccHHHHHHhc---CCHHHHHHHHHccCCCCcccccCCC
Q 037194           54 CSERLLLYKAALKG--EMKEIEGLFEKDYRSIICAAIT-EGHQTVLHVATGA---KQTSFVQQLLTFMDPEDLMLQDENG  127 (215)
Q Consensus        54 ~~g~~~L~~a~~~g--~~~~~~~ll~~~~~~~~~~~~~-~~g~~~L~~a~~~---g~~~~v~~Ll~~~~~~~~~~~~~~g  127 (215)
                      +.|.||||.|+..+  +.++++.|++.| ....  ..+ ..|.||||+|+..   ++.+++++|++.  |++++.+|..|
T Consensus        49 ~~g~TpLh~a~~~~~~~~eiv~~Ll~~g-advn--~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~--gadin~~d~~G  123 (209)
T PHA02859         49 DLYETPIFSCLEKDKVNVEILKFLIENG-ADVN--FKTRDNNLSALHHYLSFNKNVEPEILKILIDS--GSSITEEDEDG  123 (209)
T ss_pred             ccCCCHHHHHHHcCCCCHHHHHHHHHCC-CCCC--ccCCCCCCCHHHHHHHhCccccHHHHHHHHHC--CCCCCCcCCCC
Confidence            56889999999854  899999999999 5543  244 5799999998864   479999999999  99999999999


Q ss_pred             chhhHHHHh--cCcHHHHHHHHHhCCCCCCCCCCCCCCHHHH-HHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhc
Q 037194          128 NTAFCFAAA--VGAVDIANLMLKKNPSLLGIRGSKNMPPLYF-AALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDT  203 (215)
Q Consensus       128 ~t~l~~a~~--~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~-a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~  203 (215)
                      .||||+|+.  .++.+++++|++.|++ ++..|..|.||||. ++..++.+++++|+++|+ ....+..|.+|++.|...
T Consensus       124 ~TpLh~a~~~~~~~~~iv~~Li~~gad-in~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~  202 (209)
T PHA02859        124 KNLLHMYMCNFNVRINVIKLLIDSGVS-FLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFR  202 (209)
T ss_pred             CCHHHHHHHhccCCHHHHHHHHHcCCC-cccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhh
Confidence            999999876  4689999999999999 79999999999996 567889999999999999 667778889999988776


Q ss_pred             C
Q 037194          204 G  204 (215)
Q Consensus       204 ~  204 (215)
                      +
T Consensus       203 ~  203 (209)
T PHA02859        203 N  203 (209)
T ss_pred             h
Confidence            4

>PHA02946 ankyin-like protein; Provisional

Probab=99.91  E-value=2.3e-23  Score=167.96  Aligned_cols=143  Identities=13%  Similarity=0.081  Sum_probs=89.2

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCC--HHHHHHHHHccCCCCccc-ccCCCchh
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQ--TSFVQQLLTFMDPEDLML-QDENGNTA  130 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~--~~~v~~Ll~~~~~~~~~~-~~~~g~t~  130 (215)
                      ..|+||||+|+..|+.++++.|++.| ..+.  .++..|+||||+|+..++  .+++++|++.  |++++. .|..|.||
T Consensus        70 ~~G~TpLh~Aa~~g~~eiv~lLL~~G-Adin--~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~--Gadin~~~d~~g~tp  144 (446)
T PHA02946         70 DDGNYPLHIASKINNNRIVAMLLTHG-ADPN--ACDKQHKTPLYYLSGTDDEVIERINLLVQY--GAKINNSVDEEGCGP  144 (446)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCc-CCCC--CCCCCCCCHHHHHHHcCCchHHHHHHHHHc--CCCcccccCCCCCcH
Confidence            57889999999999999999999988 5442  468889999999887664  6778888877  666663 45556666


Q ss_pred             hHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCC--HHHHHHHhhcCC-CCCCCCCCchHHHHHHhc
Q 037194          131 FCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQ--TDTASFLFHKSE-KELPTEDRKVIFITSVDT  203 (215)
Q Consensus       131 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~--~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~  203 (215)
                      || |+..++.+++++|++.|++ ++..|..|+||||+|+..++  .+++++|+++|+ ....+..|.||+|.|+..
T Consensus       145 L~-aa~~~~~~vv~~Ll~~gad-~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~  218 (446)
T PHA02946        145 LL-ACTDPSERVFKKIMSIGFE-ARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSK  218 (446)
T ss_pred             HH-HHHCCChHHHHHHHhcccc-ccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence            64 3334455555555555554 44445555555554443222  344555555544 333334444444444443

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.91  E-value=3.3e-23  Score=169.87  Aligned_cols=158  Identities=13%  Similarity=0.187  Sum_probs=134.1

Q ss_pred             CcccHHHHHHHHc---CCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhc--CCHHHHHHHHHccCCCCccc-ccCCC
Q 037194           54 CSERLLLYKAALK---GEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGA--KQTSFVQQLLTFMDPEDLML-QDENG  127 (215)
Q Consensus        54 ~~g~~~L~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~--g~~~~v~~Ll~~~~~~~~~~-~~~~g  127 (215)
                      ..|+|||+.|+..   |+.++++.|++.| .... ...+..|+||||+|+..  ++.+++++|++.  |++++. .+..|
T Consensus       106 ~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G-adin-~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~--Gadi~~~~~~~g  181 (494)
T PHA02989        106 FNGVSPIVCFIYNSNINNCDMLRFLLSKG-INVN-DVKNSRGYNLLHMYLESFSVKKDVIKILLSF--GVNLFEKTSLYG  181 (494)
T ss_pred             CCCCcHHHHHHHhcccCcHHHHHHHHHCC-CCcc-cccCCCCCCHHHHHHHhccCCHHHHHHHHHc--CCCccccccccC
Confidence            5789999988765   6799999999998 5442 24688999999998764  588999999999  899988 67889


Q ss_pred             chhhHHHHhcC----cHHHHHHHHHhCCCC-------------------------------------CCCCCCCCCCHHH
Q 037194          128 NTAFCFAAAVG----AVDIANLMLKKNPSL-------------------------------------LGIRGSKNMPPLY  166 (215)
Q Consensus       128 ~t~l~~a~~~~----~~~~~~~Ll~~~~~~-------------------------------------~~~~~~~g~t~l~  166 (215)
                      .||||+|+..+    +.+++++|++.|++.                                     ++.+|..|+||||
T Consensus       182 ~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~  261 (494)
T PHA02989        182 LTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLL  261 (494)
T ss_pred             CChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHH
Confidence            99999987664    789999999988762                                     1344567999999


Q ss_pred             HHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          167 FAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       167 ~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      +|+..|+.+++++|+++|+ ....+..|.||++.|+..++.++++.||++
T Consensus       262 ~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~  311 (494)
T PHA02989        262 ISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQL  311 (494)
T ss_pred             HHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            9999999999999999999 777788899999999999999999999864

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.91  E-value=2.6e-23  Score=173.74  Aligned_cols=157  Identities=14%  Similarity=0.045  Sum_probs=132.5

Q ss_pred             cCcccHHHHHHHHc--CCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCC--HHHHHHHHHccCCCCcccccCCCc
Q 037194           53 CCSERLLLYKAALK--GEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQ--TSFVQQLLTFMDPEDLMLQDENGN  128 (215)
Q Consensus        53 ~~~g~~~L~~a~~~--g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~--~~~v~~Ll~~~~~~~~~~~~~~g~  128 (215)
                      ...|.||||.|+..  ++.++++.|++.| ....  .++..|.||||+|+..|+  .+++++|++.  |++++.+|..|+
T Consensus       174 d~~G~TpLH~A~~n~~~~~eIVklLLe~G-ADVN--~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~--GADVN~kD~~G~  248 (764)
T PHA02716        174 KKTGYGILHAYLGNMYVDIDILEWLCNNG-VNVN--LQNNHLITPLHTYLITGNVCASVIKKIIEL--GGDMDMKCVNGM  248 (764)
T ss_pred             CCCCCcHHHHHHHhccCCHHHHHHHHHcC-CCCC--CCCCCCCCHHHHHHHcCCCCHHHHHHHHHc--CCCCCCCCCCCC
Confidence            35789999998654  6789999999998 4443  468899999999999995  4899999999  999999999999


Q ss_pred             hhhHHH-------------------------------------HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH-
Q 037194          129 TAFCFA-------------------------------------AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAAL-  170 (215)
Q Consensus       129 t~l~~a-------------------------------------~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~-  170 (215)
                      ||||+|                                     +..|+.+++++|++.|++ ++..|..|+||||+|+. 
T Consensus       249 TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAd-IN~kD~~G~TPLH~Aaa~  327 (764)
T PHA02716        249 SPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVK-LHYKDSAGRTCLHQYILR  327 (764)
T ss_pred             CHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCc-eeccCCCCCCHHHHHHHH
Confidence            999975                                     345778899999999999 79999999999999864 


Q ss_pred             -hCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHh--------------cCchhHHHHhhcC
Q 037194          171 -FGQTDTASFLFHKSE-KELPTEDRKVIFITSVD--------------TGLYGKYQDIFKR  215 (215)
Q Consensus       171 -~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~--------------~~~~~~~~~ll~~  215 (215)
                       .++.+++++|+++|+ ....+..|.||+|.++.              .+..++++.||++
T Consensus       328 ~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~  388 (764)
T PHA02716        328 HNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISL  388 (764)
T ss_pred             hCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHC
Confidence             467899999999999 66677778888887653              3578999998864

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.91  E-value=3.2e-23  Score=173.25  Aligned_cols=155  Identities=12%  Similarity=-0.014  Sum_probs=130.7

Q ss_pred             CcccHHHHHHHHcCC--HHHHHHHHhhcchhhhhhhcCCCCccHHHHH--------------------------------
Q 037194           54 CSERLLLYKAALKGE--MKEIEGLFEKDYRSIICAAITEGHQTVLHVA--------------------------------   99 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~--~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a--------------------------------   99 (215)
                      ..|.||||+|+..|+  .++++.|++.| ....  .++..|+||||+|                                
T Consensus       210 ~~G~TPLH~Aa~~g~~~~eIVklLLe~G-ADVN--~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~  286 (764)
T PHA02716        210 NHLITPLHTYLITGNVCASVIKKIIELG-GDMD--MKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILH  286 (764)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHcC-CCCC--CCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhH
Confidence            578999999999995  48999999999 5543  4788999999975                                


Q ss_pred             -----HhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHh--cCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH--
Q 037194          100 -----TGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAA--VGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAAL--  170 (215)
Q Consensus       100 -----~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~--~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~--  170 (215)
                           +..|+.+++++|++.  |++++.+|..|+||||+|+.  .++.+++++|++.|++ ++..|..|+||||+|+.  
T Consensus       287 ~~i~AA~~g~leiVklLLe~--GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GAD-IN~kD~~G~TPLH~A~~~l  363 (764)
T PHA02716        287 SYITLARNIDISVVYSFLQP--GVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGND-LNEPDNIGNTVLHTYLSML  363 (764)
T ss_pred             HHHHHHHcCCHHHHHHHHhC--CCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCC-CccCCCCCCCHHHHHHHhh
Confidence                 345788899999998  99999999999999999864  4678999999999999 79999999999999875  


Q ss_pred             ------------hCCHHHHHHHhhcCC-CCCCCCCCchHHHH----HHhcCchhHHHHhhc
Q 037194          171 ------------FGQTDTASFLFHKSE-KELPTEDRKVIFIT----SVDTGLYGKYQDIFK  214 (215)
Q Consensus       171 ------------~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~----a~~~~~~~~~~~ll~  214 (215)
                                  .++.+++++|+++|+ ....+..|.+|+|.    +...+..+++++|++
T Consensus       364 av~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis  424 (764)
T PHA02716        364 SVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLIS  424 (764)
T ss_pred             hhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHh
Confidence                        368999999999999 66677778888872    333567788888875

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.91  E-value=3e-24  Score=165.36  Aligned_cols=160  Identities=18%  Similarity=0.155  Sum_probs=141.1

Q ss_pred             ccCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhh-------hcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCccccc
Q 037194           52 LCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICA-------AITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQD  124 (215)
Q Consensus        52 ~~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~-------~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~  124 (215)
                      ...+|.+||..|++.|+.+.|++|+++. ......       -....|.+||-.|+..||+++|+.|++.  ++++|...
T Consensus        38 ~~~~g~tPL~iaaRnGH~~vVeyLle~~-~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~--ga~VN~tT  114 (615)
T KOG0508|consen   38 EVQNGGTPLLIAARNGHADVVEYLLEHC-RASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRR--GASVNDTT  114 (615)
T ss_pred             cccCCCCceeeehhcCcHHHHHHHHHHh-cCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHh--cCcccccc
Confidence            3356779999999999999999999964 111110       1134577899889999999999999999  89999887


Q ss_pred             CCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhc
Q 037194          125 ENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDT  203 (215)
Q Consensus       125 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~  203 (215)
                      ....|||..||..|+.+++++|+++|++ +++.|+.|.|.||+|+.+|+.+++++|++.|+ ...++..|+|.+|-|+..
T Consensus       115 ~TNStPLraACfDG~leivKyLvE~gad-~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEs  193 (615)
T KOG0508|consen  115 RTNSTPLRAACFDGHLEIVKYLVEHGAD-PEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAES  193 (615)
T ss_pred             ccCCccHHHHHhcchhHHHHHHHHcCCC-CcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhc
Confidence            7788999999999999999999999999 79999999999999999999999999999999 777888899999999999


Q ss_pred             CchhHHHHhhcC
Q 037194          204 GLYGKYQDIFKR  215 (215)
Q Consensus       204 ~~~~~~~~ll~~  215 (215)
                      |+.++++.||++
T Consensus       194 G~vdivq~Ll~~  205 (615)
T KOG0508|consen  194 GSVDIVQLLLKH  205 (615)
T ss_pred             ccHHHHHHHHhC
Confidence            999999999863

>PHA03095 ankyrin-like protein; Provisional

Probab=99.91  E-value=5e-23  Score=168.16  Aligned_cols=154  Identities=15%  Similarity=0.137  Sum_probs=121.9

Q ss_pred             cccHHHHHHHHcC--CHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhc--CCHHHHHHHHHccCCCCcccccCCCchh
Q 037194           55 SERLLLYKAALKG--EMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGA--KQTSFVQQLLTFMDPEDLMLQDENGNTA  130 (215)
Q Consensus        55 ~g~~~L~~a~~~g--~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~--g~~~~v~~Ll~~~~~~~~~~~~~~g~t~  130 (215)
                      .|.||||.|+..+  +.++++.|++.+ .....  .+..|.||||+++..  ++.++++.|++.  |++++.+|..|+||
T Consensus       151 ~g~tpL~~a~~~~~~~~~iv~~Ll~~g-~~~~~--~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~--g~~~~~~d~~g~tp  225 (471)
T PHA03095        151 YGMTPLAVLLKSRNANVELLRLLIDAG-ADVYA--VDDRFRSLLHHHLQSFKPRARIVRELIRA--GCDPAATDMLGNTP  225 (471)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHcC-CCCcc--cCCCCCCHHHHHHHHCCCcHHHHHHHHHc--CCCCcccCCCCCCH
Confidence            4556666555543  355666666665 33322  256677777777754  567778888887  88888888889999


Q ss_pred             hHHHHhcCcH--HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchh
Q 037194          131 FCFAAAVGAV--DIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYG  207 (215)
Q Consensus       131 l~~a~~~~~~--~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~  207 (215)
                      ||+|+..++.  .+++.|++.|++ ++..|..|+||||+|+..|+.+++++|++.|+ ....+..|.||++.|+..++.+
T Consensus       226 Lh~Aa~~~~~~~~~v~~ll~~g~d-in~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~  304 (471)
T PHA03095        226 LHSMATGSSCKRSLVLPLLIAGIS-INARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGR  304 (471)
T ss_pred             HHHHHhcCCchHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHH
Confidence            9999888864  578889999998 79999999999999999999999999999999 7777888899999999999999


Q ss_pred             HHHHhhc
Q 037194          208 KYQDIFK  214 (215)
Q Consensus       208 ~~~~ll~  214 (215)
                      ++..||+
T Consensus       305 ~v~~LL~  311 (471)
T PHA03095        305 AVRAALA  311 (471)
T ss_pred             HHHHHHH
Confidence            9999885

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.91  E-value=5.6e-23  Score=177.07  Aligned_cols=153  Identities=16%  Similarity=0.088  Sum_probs=137.6

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .+.++|+.|+..|+.+.++.|++.| ...  ...|..|+||||+|+.+|+.+++++|++.  |++++.+|..|+||||+|
T Consensus       524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G-~d~--n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~--gadin~~d~~G~TpL~~A  598 (823)
T PLN03192        524 NMASNLLTVASTGNAALLEELLKAK-LDP--DIGDSKGRTPLHIAASKGYEDCVLVLLKH--ACNVHIRDANGNTALWNA  598 (823)
T ss_pred             cchhHHHHHHHcCCHHHHHHHHHCC-CCC--CCCCCCCCCHHHHHHHcChHHHHHHHHhc--CCCCCCcCCCCCCHHHHH
Confidence            4468899999999999999999998 443  35789999999999999999999999998  999999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      +..|+.+++++|++.++. .+.  ..+.++||.|+..|+.+++++|+++|+ ....+..|.||+|.|+..|+.+++++||
T Consensus       599 ~~~g~~~iv~~L~~~~~~-~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll  675 (823)
T PLN03192        599 ISAKHHKIFRILYHFASI-SDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLI  675 (823)
T ss_pred             HHhCCHHHHHHHHhcCcc-cCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHH
Confidence            999999999999987765 332  457799999999999999999999999 6777888999999999999999999998


Q ss_pred             cC
Q 037194          214 KR  215 (215)
Q Consensus       214 ~~  215 (215)
                      ++
T Consensus       676 ~~  677 (823)
T PLN03192        676 MN  677 (823)
T ss_pred             Hc
Confidence            63

>PHA02795 ankyrin-like protein; Provisional

Probab=99.90  E-value=8.8e-23  Score=160.68  Aligned_cols=157  Identities=15%  Similarity=0.068  Sum_probs=134.4

Q ss_pred             cccCcccHHHHHHHH--cCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCc-ccc----
Q 037194           51 KLCCSERLLLYKAAL--KGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDL-MLQ----  123 (215)
Q Consensus        51 ~~~~~g~~~L~~a~~--~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~-~~~----  123 (215)
                      .....++++||.++.  .|+.++++.|++.| +....    ..+.||+|.|+..++.+++++|++.  |++. +..    
T Consensus       111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~G-ADIn~----~~~~t~lh~A~~~~~~eIVk~Lls~--Ga~~~n~~~~~l  183 (437)
T PHA02795        111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVDHG-AVIYK----IECLNAYFRGICKKESSVVEFILNC--GIPDENDVKLDL  183 (437)
T ss_pred             hccccccHHHHHHHHhcCCCHHHHHHHHHCC-CCCCC----CCCCCHHHHHHHcCcHHHHHHHHhc--CCcccccccchh
Confidence            345678999999999  89999999999999 44321    3558999999999999999999999  7533 222    


Q ss_pred             -cCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHH
Q 037194          124 -DENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSV  201 (215)
Q Consensus       124 -~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~  201 (215)
                       +..+.+++|.|...++.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..|.||+|.|+
T Consensus       184 ~~~~~~t~l~~a~~~~~~eIve~LIs~GAD-IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa  262 (437)
T PHA02795        184 YKIIQYTRGFLVDEPTVLEIYKLCIPYIED-INQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAV  262 (437)
T ss_pred             hhhhccchhHHHHhcCHHHHHHHHHhCcCC-cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence             23477899999999999999999999999 79999999999999999999999999999999 7777788888999888


Q ss_pred             hcCc--------hhHHHHhhcC
Q 037194          202 DTGL--------YGKYQDIFKR  215 (215)
Q Consensus       202 ~~~~--------~~~~~~ll~~  215 (215)
                      ..|.        .++++.||++
T Consensus       263 ~~g~~~~~~~~~~eIvelLL~~  284 (437)
T PHA02795        263 DRGSVIARRETHLKILEILLRE  284 (437)
T ss_pred             HcCCcccccccHHHHHHHHHhC
Confidence            8773        5888888754

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.90  E-value=9.3e-23  Score=143.79  Aligned_cols=126  Identities=12%  Similarity=0.134  Sum_probs=108.8

Q ss_pred             CcccHHHHHHHHcCCHH----HHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHH---HHHHHHccCCCCccccc-C
Q 037194           54 CSERLLLYKAALKGEMK----EIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSF---VQQLLTFMDPEDLMLQD-E  125 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~----~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~---v~~Ll~~~~~~~~~~~~-~  125 (215)
                      ..+.++||.|++.|+.+    +++.|++.+ .. . ...+..|+||||+|+.+|+.+.   +++|+..  |++++.++ .
T Consensus        18 ~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g-~~-~-~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~--Gadin~~d~~   92 (166)
T PHA02743         18 EDEQNTFLRICRTGNIYELMEVAPFISGDG-HL-L-HRYDHHGRQCTHMVAWYDRANAVMKIELLVNM--GADINARELG   92 (166)
T ss_pred             cCCCcHHHHHHHcCCHHHHHHHHHHHhhcc-hh-h-hccCCCCCcHHHHHHHhCccCHHHHHHHHHHc--CCCCCCCCCC
Confidence            35568899999999984    444555655 32 2 3568899999999999998654   7899998  99999998 5


Q ss_pred             CCchhhHHHHhcCcHHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          126 NGNTAFCFAAAVGAVDIANLMLK-KNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       126 ~g~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      .|.||||+|+..++.+++++|+. .|++ ++..+..|.||||+|+..++.+++++|+++|+
T Consensus        93 ~g~TpLh~A~~~g~~~iv~~Ll~~~gad-~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga  152 (166)
T PHA02743         93 TGNTLLHIAASTKNYELAEWLCRQLGVN-LGAINYQHETAYHIAYKMRDRRMMEILRANGA  152 (166)
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHhccCCC-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            89999999999999999999996 7888 78899999999999999999999999999998

>PHA02798 ankyrin-like protein; Provisional

Probab=99.90  E-value=9.2e-23  Score=167.05  Aligned_cols=157  Identities=13%  Similarity=0.180  Sum_probs=125.8

Q ss_pred             CcccHHHHHHHHcC---CHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCC---HHHHHHHHHccCCCCccccc-CC
Q 037194           54 CSERLLLYKAALKG---EMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQ---TSFVQQLLTFMDPEDLMLQD-EN  126 (215)
Q Consensus        54 ~~g~~~L~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~---~~~v~~Ll~~~~~~~~~~~~-~~  126 (215)
                      ..|+||||.|+..+   +.++++.|++.| +..  ...+..|.||||+|+..++   .+++++|++.  |++++.++ ..
T Consensus       107 ~~G~TpLh~a~~~~~~~~~~iv~~Ll~~G-adv--n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~--gadin~~~~~~  181 (489)
T PHA02798        107 SDGETPLYCLLSNGYINNLEILLFMIENG-ADT--TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK--GVDINTHNNKE  181 (489)
T ss_pred             CCcCcHHHHHHHcCCcChHHHHHHHHHcC-CCc--cccCCCCCcHHHHHHHcCCcchHHHHHHHHHh--CCCcccccCcC
Confidence            46888888888875   678888888888 443  2467888888888888887   8888888888  88888774 46


Q ss_pred             CchhhHHHHhc----CcHHHHHHHHHhCCCC--------------------------------------CCCCCCCCCCH
Q 037194          127 GNTAFCFAAAV----GAVDIANLMLKKNPSL--------------------------------------LGIRGSKNMPP  164 (215)
Q Consensus       127 g~t~l~~a~~~----~~~~~~~~Ll~~~~~~--------------------------------------~~~~~~~g~t~  164 (215)
                      |.||||.++..    ++.+++++|++.|++.                                      ++.+|..|+||
T Consensus       182 ~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TP  261 (489)
T PHA02798        182 KYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNP  261 (489)
T ss_pred             CCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccH
Confidence            78888877654    3677788887776531                                      34466789999


Q ss_pred             HHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          165 LYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       165 l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      ||+|+..|+.+++++|+++|+ ....+..|.||++.|+..+..+++..||++
T Consensus       262 L~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~  313 (489)
T PHA02798        262 LYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNK  313 (489)
T ss_pred             HHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHcc
Confidence            999999999999999999999 777788889999999999999998888763

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.90  E-value=7.9e-24  Score=158.24  Aligned_cols=155  Identities=17%  Similarity=0.226  Sum_probs=137.0

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcC-----CHHHHHHHHHccCCCCcccccC-CC
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAK-----QTSFVQQLLTFMDPEDLMLQDE-NG  127 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g-----~~~~v~~Ll~~~~~~~~~~~~~-~g  127 (215)
                      .+|+|+||+++.+++++.|+.||+.+ --.++ ..+.-|.||+++++...     +.++|..|...   .++|++.. .|
T Consensus       266 sNGNTALHYsVSHaNF~VV~~LLDSg-vC~VD-~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m---gnVNaKAsQ~g  340 (452)
T KOG0514|consen  266 SNGNTALHYAVSHANFDVVSILLDSG-VCDVD-QQNRAGYTPVMLAALAKLKQPADRTVVERLFKM---GDVNAKASQHG  340 (452)
T ss_pred             CCCCeeeeeeecccchHHHHHHhccC-ccccc-ccccccccHHHHHHHHhhcchhhHHHHHHHHhc---cCcchhhhhhc
Confidence            58899999999999999999999998 33333 56778999999998764     56778888876   67887754 59


Q ss_pred             chhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC--CCCCCCCCchHHHHHHhcCc
Q 037194          128 NTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE--KELPTEDRKVIFITSVDTGL  205 (215)
Q Consensus       128 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~--~~~~~~~~~~~~~~a~~~~~  205 (215)
                      .|+|++|+.+|+.++++.|+.-|++ ++++|.+|.|+|++|+.+||.+++++||....  ..+.+.+|+|.|.+|...|+
T Consensus       341 QTALMLAVSHGr~d~vk~LLacgAd-VNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh  419 (452)
T KOG0514|consen  341 QTALMLAVSHGRVDMVKALLACGAD-VNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH  419 (452)
T ss_pred             chhhhhhhhcCcHHHHHHHHHccCC-CccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence            9999999999999999999999999 89999999999999999999999999999977  77789999999999999999


Q ss_pred             hhHHHHhhc
Q 037194          206 YGKYQDIFK  214 (215)
Q Consensus       206 ~~~~~~ll~  214 (215)
                      -+++-.|..
T Consensus       420 ~eIa~mlYa  428 (452)
T KOG0514|consen  420 REIAVMLYA  428 (452)
T ss_pred             hHHHHHHHH
Confidence            999877743

>PHA02741 hypothetical protein; Provisional

Probab=99.90  E-value=1.4e-22  Score=143.42  Aligned_cols=129  Identities=18%  Similarity=0.179  Sum_probs=111.9

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhc---chhhhhhhcCCCCccHHHHHHhcCC----HHHHHHHHHccCCCCcccccC-
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKD---YRSIICAAITEGHQTVLHVATGAKQ----TSFVQQLLTFMDPEDLMLQDE-  125 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~---~~~~~~~~~~~~g~~~L~~a~~~g~----~~~v~~Ll~~~~~~~~~~~~~-  125 (215)
                      ..|.++||.|+..|+.++++.|+...   ........++..|+||||+|+..|+    .+++++|+..  +.+++.++. 
T Consensus        19 ~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~--gadin~~~~~   96 (169)
T PHA02741         19 SEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL--GADINAQEML   96 (169)
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc--CCCCCCCCcC
Confidence            56789999999999999999886421   0011223578899999999999998    5889999998  999999985 


Q ss_pred             CCchhhHHHHhcCcHHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          126 NGNTAFCFAAAVGAVDIANLMLK-KNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       126 ~g~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      .|+||||+|+..++.+++++|+. .+++ ++..|..|.||||+|+..++.+++++|++.++
T Consensus        97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~-~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~  156 (169)
T PHA02741         97 EGDTALHLAAHRRDHDLAEWLCCQPGID-LHFCNADNKSPFELAIDNEDVAMMQILREIVA  156 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence            89999999999999999999998 5888 78999999999999999999999999999876

>PHA03095 ankyrin-like protein; Provisional

Probab=99.90  E-value=2.2e-22  Score=164.37  Aligned_cols=154  Identities=12%  Similarity=0.056  Sum_probs=113.0

Q ss_pred             CcccHHHHHHHHcC---CHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcC-CHHHHHHHHHccCCCCcccccCCCch
Q 037194           54 CSERLLLYKAALKG---EMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAK-QTSFVQQLLTFMDPEDLMLQDENGNT  129 (215)
Q Consensus        54 ~~g~~~L~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g-~~~~v~~Ll~~~~~~~~~~~~~~g~t  129 (215)
                      ..|.||||.|+..|   +.++++.|++.| ....  ..+..|.||||+|+..| ..+++++|++.  |++++.++..|.|
T Consensus        45 ~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~G-adin--~~~~~g~TpLh~A~~~~~~~~iv~lLl~~--ga~in~~~~~g~t  119 (471)
T PHA03095         45 EYGKTPLHLYLHYSSEKVKDIVRLLLEAG-ADVN--APERCGFTPLHLYLYNATTLDVIKLLIKA--GADVNAKDKVGRT  119 (471)
T ss_pred             CCCCCHHHHHHHhcCCChHHHHHHHHHCC-CCCC--CCCCCCCCHHHHHHHcCCcHHHHHHHHHc--CCCCCCCCCCCCC
Confidence            46778888888887   788888888887 4432  45667888888888888 58888888888  8888888888888


Q ss_pred             hhHHHH--hcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhC--CHHHHHHHhhcCC-CCCCCCCCchHHHHHHhc-
Q 037194          130 AFCFAA--AVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFG--QTDTASFLFHKSE-KELPTEDRKVIFITSVDT-  203 (215)
Q Consensus       130 ~l~~a~--~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g--~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~-  203 (215)
                      |||+|+  ..++.+++++|++.|++ ++..|..|.||||+|+..+  ..+++++|+++|+ ....+..+.+++|.++.. 
T Consensus       120 pLh~a~~~~~~~~~iv~~Ll~~gad-~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~  198 (471)
T PHA03095        120 PLHVYLSGFNINPKVIRLLLRKGAD-VNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSF  198 (471)
T ss_pred             HHHHHhhCCcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHC
Confidence            888888  44567888888888888 6778888888888877755  4677888888877 333355566666655442 


Q ss_pred             -CchhHHHHhh
Q 037194          204 -GLYGKYQDIF  213 (215)
Q Consensus       204 -~~~~~~~~ll  213 (215)
                       +..++++.|+
T Consensus       199 ~~~~~i~~~Ll  209 (471)
T PHA03095        199 KPRARIVRELI  209 (471)
T ss_pred             CCcHHHHHHHH
Confidence             4455555554

>PHA02946 ankyin-like protein; Provisional

Probab=99.90  E-value=2e-22  Score=162.56  Aligned_cols=155  Identities=12%  Similarity=0.062  Sum_probs=131.1

Q ss_pred             cCcccHHHHHHHHcCC--HHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchh
Q 037194           53 CCSERLLLYKAALKGE--MKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTA  130 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~--~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~  130 (215)
                      ...|+||||+|+..++  .+.++.|++.| ..... ..+..|.|||| |+..|+.+++++|++.  |++++.+|..|+||
T Consensus       102 d~~g~TpLh~A~~~~~~~~e~v~lLl~~G-adin~-~~d~~g~tpL~-aa~~~~~~vv~~Ll~~--gad~~~~d~~G~t~  176 (446)
T PHA02946        102 DKQHKTPLYYLSGTDDEVIERINLLVQYG-AKINN-SVDEEGCGPLL-ACTDPSERVFKKIMSI--GFEARIVDKFGKNH  176 (446)
T ss_pred             CCCCCCHHHHHHHcCCchHHHHHHHHHcC-CCccc-ccCCCCCcHHH-HHHCCChHHHHHHHhc--cccccccCCCCCCH
Confidence            3688999999988764  88999999998 54432 45788999997 6777999999999998  99999999999999


Q ss_pred             hHHHHhcC--cHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhC--CHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCc
Q 037194          131 FCFAAAVG--AVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFG--QTDTASFLFHKSE-KELPTEDRKVIFITSVDTGL  205 (215)
Q Consensus       131 l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g--~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~  205 (215)
                      ||+|+..+  +.+++++|++.|++ ++..|..|.||||+|+..+  +.+++++|+. |+ ....+..|.||+|.|+..+.
T Consensus       177 Lh~A~~~~~~~~~~v~~Ll~~Gad-in~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~  254 (446)
T PHA02946        177 IHRHLMSDNPKASTISWMMKLGIS-PSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLS  254 (446)
T ss_pred             HHHHHHhcCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCC
Confidence            99988765  46899999999999 7999999999999999986  7899999985 66 66677788888888877766


Q ss_pred             -hhHHHHhhc
Q 037194          206 -YGKYQDIFK  214 (215)
Q Consensus       206 -~~~~~~ll~  214 (215)
                       .++++.|++
T Consensus       255 ~~~~~~~Ll~  264 (446)
T PHA02946        255 PAHLINKLLS  264 (446)
T ss_pred             hHHHHHHHHh
Confidence             577777765

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.89  E-value=4.5e-22  Score=169.04  Aligned_cols=154  Identities=18%  Similarity=0.149  Sum_probs=88.6

Q ss_pred             cccHHHHHHHHcC-CHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcC-CHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           55 SERLLLYKAALKG-EMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAK-QTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        55 ~g~~~L~~a~~~g-~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g-~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      .|.||||+|+..| +.+.++.|+..+ ...  ...+..|.||||+|+..+ +.++++.|++.  |++++.+|..|.||||
T Consensus       306 ~g~TpLh~Aa~~g~~~~~v~~Ll~~g-adi--n~~d~~g~TpLh~A~~~~~~~~iv~lLl~~--gadin~~d~~G~TpLh  380 (682)
T PHA02876        306 KGETPLYLMAKNGYDTENIRTLIMLG-ADV--NAADRLYITPLHQASTLDRNKDIVITLLEL--GANVNARDYCDKTPIH  380 (682)
T ss_pred             CCCCHHHHHHHhCCCHHHHHHHHHcC-CCC--CCcccCCCcHHHHHHHhCCcHHHHHHHHHc--CCCCccCCCCCCCHHH
Confidence            4555555555555 355555555554 222  123445555555555532 45555555555  6666666666666666


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCC-HHHHHHHhhcCC-CCCCCCCCchHHHHHHhcC-chhHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQ-TDTASFLFHKSE-KELPTEDRKVIFITSVDTG-LYGKY  209 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~-~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~-~~~~~  209 (215)
                      +|+..++.+++++|++.|++ ++..+..|.||||+|+..+. ..++++|+++|+ ....+..|.||+|.|+..+ ..+++
T Consensus       381 ~Aa~~~~~~iv~~Ll~~gad-~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv  459 (682)
T PHA02876        381 YAAVRNNVVIINTLLDYGAD-IEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVI  459 (682)
T ss_pred             HHHHcCCHHHHHHHHHCCCC-ccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHH
Confidence            66666666666666666666 45555566666666665444 345666666666 4455556666666666544 45677


Q ss_pred             HHhhc
Q 037194          210 QDIFK  214 (215)
Q Consensus       210 ~~ll~  214 (215)
                      +.||+
T Consensus       460 ~lLl~  464 (682)
T PHA02876        460 EMLLD  464 (682)
T ss_pred             HHHHH
Confidence            66664

>PHA02917 ankyrin-like protein; Provisional

Probab=99.89  E-value=4.1e-22  Score=166.74  Aligned_cols=156  Identities=10%  Similarity=0.060  Sum_probs=118.4

Q ss_pred             cCcccHHHHHHHHc---CCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcC--------------------------
Q 037194           53 CCSERLLLYKAALK---GEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAK--------------------------  103 (215)
Q Consensus        53 ~~~g~~~L~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g--------------------------  103 (215)
                      ...|+||||+|+..   |+.+.++.|++.| ....  ..+..|+||||+|+..|                          
T Consensus        29 d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~g-a~v~--~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~  105 (661)
T PHA02917         29 NQFKNNALHAYLFNEHCNNVEVVKLLLDSG-TNPL--HKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNI  105 (661)
T ss_pred             CCCCCcHHHHHHHhhhcCcHHHHHHHHHCC-CCcc--ccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcch
Confidence            34667777776444   6677777777776 4332  35666777777666544                          


Q ss_pred             ---------CHHHHHHHHHccCCCCcccccCCCchhhHHHH--hcCcHHHHHHHHHhCCCCCCCCCC---CC--------
Q 037194          104 ---------QTSFVQQLLTFMDPEDLMLQDENGNTAFCFAA--AVGAVDIANLMLKKNPSLLGIRGS---KN--------  161 (215)
Q Consensus       104 ---------~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~--~~~~~~~~~~Ll~~~~~~~~~~~~---~g--------  161 (215)
                               +.++|++|++.  |++++.+|..|.||||+++  ..|+.+++++|++.|++ ++..|.   .|        
T Consensus       106 ~~~~a~~~~~~e~vk~Ll~~--Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~-vn~~d~~~~~g~~~~~~~~  182 (661)
T PHA02917        106 FSYMKSKNVDVDLIKVLVEH--GFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCS-VLYEDEDDEYGYAYDDYQP  182 (661)
T ss_pred             HHHHHhhcCCHHHHHHHHHc--CCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCC-ccccccccccccccccccc
Confidence                     45677777777  8999999999999999643  56899999999999998 665443   23        


Q ss_pred             ---CCHHHHHHH-----------hCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCch--hHHHHhhc
Q 037194          162 ---MPPLYFAAL-----------FGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLY--GKYQDIFK  214 (215)
Q Consensus       162 ---~t~l~~a~~-----------~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~--~~~~~ll~  214 (215)
                         .||||+|+.           .++.+++++|++.|+ ....+.+|.+|+|.|+..|+.  ++++.|++
T Consensus       183 ~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~  252 (661)
T PHA02917        183 RNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK  252 (661)
T ss_pred             cccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh
Confidence               599999986           468999999999999 777788888899988888875  68888764

>PHA02798 ankyrin-like protein; Provisional

Probab=99.89  E-value=5.8e-22  Score=162.36  Aligned_cols=156  Identities=13%  Similarity=0.075  Sum_probs=132.5

Q ss_pred             CcccHHHHHHHHc-----CCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcC---CHHHHHHHHHccCCCCcccccC
Q 037194           54 CSERLLLYKAALK-----GEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAK---QTSFVQQLLTFMDPEDLMLQDE  125 (215)
Q Consensus        54 ~~g~~~L~~a~~~-----g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g---~~~~v~~Ll~~~~~~~~~~~~~  125 (215)
                      ..|.||||.|+..     +..++++.|++.| ...  ...+..|+||||+|+..+   +.+++++|++.  |++++.+|.
T Consensus        69 ~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~G-adi--N~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~--Gadvn~~d~  143 (489)
T PHA02798         69 NEYSTPLCTILSNIKDYKHMLDIVKILIENG-ADI--NKKNSDGETPLYCLLSNGYINNLEILLFMIEN--GADTTLLDK  143 (489)
T ss_pred             CCCCChHHHHHHhHHhHHhHHHHHHHHHHCC-CCC--CCCCCCcCcHHHHHHHcCCcChHHHHHHHHHc--CCCccccCC
Confidence            5788999998764     6789999999998 543  357889999999999986   68999999999  999999999


Q ss_pred             CCchhhHHHHhcCc---HHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHHh----CCHHHHHHHhhcCC-CC---------
Q 037194          126 NGNTAFCFAAAVGA---VDIANLMLKKNPSLLGIRG-SKNMPPLYFAALF----GQTDTASFLFHKSE-KE---------  187 (215)
Q Consensus       126 ~g~t~l~~a~~~~~---~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~a~~~----g~~~~v~~Ll~~~~-~~---------  187 (215)
                      .|.||||+|+..++   .+++++|++.|++ ++..+ ..|.||||.++..    ++.+++++|+++|+ ..         
T Consensus       144 ~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad-in~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~  222 (489)
T PHA02798        144 DGFTMLQVYLQSNHHIDIEIIKLLLEKGVD-INTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKK  222 (489)
T ss_pred             CCCcHHHHHHHcCCcchHHHHHHHHHhCCC-cccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccch
Confidence            99999999999987   9999999999999 67664 5789999998765    47899999999886 11         


Q ss_pred             ------------------------------CCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          188 ------------------------------LPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       188 ------------------------------~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                                                    ..+..|.||+|.|+..+..+++++||++
T Consensus       223 ~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~  280 (489)
T PHA02798        223 FMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQL  280 (489)
T ss_pred             HHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHc
Confidence                                          1344678999999999999999999864

>PHA02741 hypothetical protein; Provisional

Probab=99.88  E-value=1.3e-21  Score=138.46  Aligned_cols=126  Identities=16%  Similarity=0.186  Sum_probs=111.5

Q ss_pred             cCCCCccHHHHHHhcCCHHHHHHHHHcc----CCCCcccccCCCchhhHHHHhcCc----HHHHHHHHHhCCCCCCCCCC
Q 037194           88 ITEGHQTVLHVATGAKQTSFVQQLLTFM----DPEDLMLQDENGNTAFCFAAAVGA----VDIANLMLKKNPSLLGIRGS  159 (215)
Q Consensus        88 ~~~~g~~~L~~a~~~g~~~~v~~Ll~~~----~~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~  159 (215)
                      ++..|.|+||+|+..|+.++++.|+...    .+.+++.+|..|+||||+|+..|+    .+++++|++.|++ ++.++.
T Consensus        17 ~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad-in~~~~   95 (169)
T PHA02741         17 KNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD-INAQEM   95 (169)
T ss_pred             cccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC-CCCCCc
Confidence            5778999999999999999999986531    157789999999999999999998    5889999999999 788885


Q ss_pred             -CCCCHHHHHHHhCCHHHHHHHhhc-CC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          160 -KNMPPLYFAALFGQTDTASFLFHK-SE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       160 -~g~t~l~~a~~~g~~~~v~~Ll~~-~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                       .|+||||+|+..++.+++++|+.. ++ ....+..|.+|++.|+..+..+++..|++
T Consensus        96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~  153 (169)
T PHA02741         96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILRE  153 (169)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence             899999999999999999999985 76 66777889999999999999999988874

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.88  E-value=8.3e-22  Score=133.38  Aligned_cols=145  Identities=21%  Similarity=0.218  Sum_probs=127.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      ..+.+|+..+.+..|+.||+.. +..++ .+|.+|.||||-|+++|+.+||+.|+..  +++.+.+...||||||-||.-
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~-an~vN-trD~D~YTpLHRAaYn~h~div~~ll~~--gAn~~a~T~~GWTPLhSAckW  140 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEK-ANHVN-TRDEDEYTPLHRAAYNGHLDIVHELLLS--GANKEAKTNEGWTPLHSACKW  140 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhc-ccccc-ccccccccHHHHHHhcCchHHHHHHHHc--cCCcccccccCccchhhhhcc
Confidence            4589999999999999999998 77766 5899999999999999999999999998  999999999999999999999


Q ss_pred             CcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCC-HHHHHHHhhcCC--CCCCCCCCchHHHHHHhcCchh
Q 037194          138 GAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQ-TDTASFLFHKSE--KELPTEDRKVIFITSVDTGLYG  207 (215)
Q Consensus       138 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~-~~~v~~Ll~~~~--~~~~~~~~~~~~~~a~~~~~~~  207 (215)
                      .+.+++.+|+..|++ ++.......||||+|+...+ ...+.+|+....  ..+.+..+.+++..|-..+.+.
T Consensus       141 nN~~va~~LLqhgaD-VnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s~  212 (228)
T KOG0512|consen  141 NNFEVAGRLLQHGAD-VNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMSH  212 (228)
T ss_pred             cchhHHHHHHhccCc-ccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhhH
Confidence            999999999999999 89999999999999998666 566777776655  5556667788888886655443

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.88  E-value=1.5e-21  Score=165.92  Aligned_cols=155  Identities=15%  Similarity=0.142  Sum_probs=130.3

Q ss_pred             CcccHHHHHHHHcCCH-HHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcC-CHHHHHHHHHccCCCCcccccCCCchhh
Q 037194           54 CSERLLLYKAALKGEM-KEIEGLFEKDYRSIICAAITEGHQTVLHVATGAK-QTSFVQQLLTFMDPEDLMLQDENGNTAF  131 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~-~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g-~~~~v~~Ll~~~~~~~~~~~~~~g~t~l  131 (215)
                      ..|+||||+|+..|+. ++++.|++.+ ...  ...+..|.||||+|+..| ..++++.|+..  |++++..|..|.|||
T Consensus       271 ~~g~TpLh~Aa~~~~~~~iv~lLl~~g-adi--n~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~--gadin~~d~~g~TpL  345 (682)
T PHA02876        271 DCKNTPLHHASQAPSLSRLVPKLLERG-ADV--NAKNIKGETPLYLMAKNGYDTENIRTLIML--GADVNAADRLYITPL  345 (682)
T ss_pred             CCCCCHHHHHHhCCCHHHHHHHHHHCC-CCC--CCcCCCCCCHHHHHHHhCCCHHHHHHHHHc--CCCCCCcccCCCcHH
Confidence            4688999999999997 5788888887 433  346889999999999999 58999999999  999999999999999


Q ss_pred             HHHHhc-CcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHh-cCchhH
Q 037194          132 CFAAAV-GAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVD-TGLYGK  208 (215)
Q Consensus       132 ~~a~~~-~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~-~~~~~~  208 (215)
                      |+|+.. ++.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|++.|+ ....+..+.+++|.|+. .+...+
T Consensus       346 h~A~~~~~~~~iv~lLl~~gad-in~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~  424 (682)
T PHA02876        346 HQASTLDRNKDIVITLLELGAN-VNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMS  424 (682)
T ss_pred             HHHHHhCCcHHHHHHHHHcCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHH
Confidence            999885 578899999999999 79999999999999999999999999999998 44445555566666655 444566


Q ss_pred             HHHhhc
Q 037194          209 YQDIFK  214 (215)
Q Consensus       209 ~~~ll~  214 (215)
                      ++.|++
T Consensus       425 vk~Ll~  430 (682)
T PHA02876        425 VKTLID  430 (682)
T ss_pred             HHHHHh
Confidence            777765

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.88  E-value=4.5e-22  Score=138.91  Aligned_cols=129  Identities=12%  Similarity=0.161  Sum_probs=105.7

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcc--hhhhhhhcCCCCccHHHHHHhcCCH---HHHHHHHHccCCCCccccc-CCC
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDY--RSIICAAITEGHQTVLHVATGAKQT---SFVQQLLTFMDPEDLMLQD-ENG  127 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~--~~~~~~~~~~~g~~~L~~a~~~g~~---~~v~~Ll~~~~~~~~~~~~-~~g  127 (215)
                      ..|.||||+|++.|+.+.+........  ........+..|.||||+|+..|+.   +++++|++.  |++++.++ ..|
T Consensus        15 ~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~--gadin~~~~~~g   92 (154)
T PHA02736         15 IEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEW--GADINGKERVFG   92 (154)
T ss_pred             CCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHc--CCCccccCCCCC
Confidence            468899999999998533222111110  0111224688899999999999987   468899998  99999998 489


Q ss_pred             chhhHHHHhcCcHHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          128 NTAFCFAAAVGAVDIANLMLKK-NPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       128 ~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      +||||+|+..++.+++++|+.. |++ ++..+..|.||||+|+..|+.+++++|++.|+
T Consensus        93 ~T~Lh~A~~~~~~~i~~~Ll~~~g~d-~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga  150 (154)
T PHA02736         93 NTPLHIAVYTQNYELATWLCNQPGVN-MEILNYAFKTPYYVACERHDAKMMNILRAKGA  150 (154)
T ss_pred             CcHHHHHHHhCCHHHHHHHHhCCCCC-CccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            9999999999999999999984 788 79999999999999999999999999999986

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.88  E-value=7.2e-22  Score=160.88  Aligned_cols=160  Identities=17%  Similarity=0.190  Sum_probs=120.6

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchh---hhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCC-----------
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRS---IICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED-----------  119 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~---~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~-----------  119 (215)
                      ..|.+++|.|++.|..++.+.++.+. +.   .....-+..+.+|||.|+..|++++++..|..+.+..           
T Consensus       185 ~~~~~~iH~aa~s~s~e~mEi~l~~~-g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~k  263 (929)
T KOG0510|consen  185 IDGNFPIHEAARSGSKECMEIFLPEH-GYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEK  263 (929)
T ss_pred             CcCCchHHHHHHhcchhhhhhhhccc-cchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHH
Confidence            34455555555555555555555521 00   0111234567888888888888888888888732211           


Q ss_pred             --cccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhh-cCC--CCCCCCCCc
Q 037194          120 --LMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFH-KSE--KELPTEDRK  194 (215)
Q Consensus       120 --~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~-~~~--~~~~~~~~~  194 (215)
                        +|..|.+|.||||+|++.|+.++++.|+..|++ ++.++.++.||||.|+.+|++++++-|++ .+.  ....+..|.
T Consensus       264 elv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~-I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~  342 (929)
T KOG0510|consen  264 ELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGAS-INSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGM  342 (929)
T ss_pred             HHhhcccccCCchHHHHHHcCChhHHHHHHHcCCc-ccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCC
Confidence              345688999999999999999999999999999 79999999999999999999999999999 443  344566788


Q ss_pred             hHHHHHHhcCchhHHHHhhcC
Q 037194          195 VIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       195 ~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      +|+|+|+..|+..+++.||.+
T Consensus       343 tpLHlaa~~gH~~v~qlLl~~  363 (929)
T KOG0510|consen  343 TPLHLAAKSGHDRVVQLLLNK  363 (929)
T ss_pred             CchhhhhhcCHHHHHHHHHhc
Confidence            899999999999999999864

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.88  E-value=3.9e-22  Score=139.93  Aligned_cols=151  Identities=18%  Similarity=0.136  Sum_probs=128.7

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .+++++.+++...+++.+..+.+..    ++ ..|+.|.|||.||+.+|++..|++|++.  |++++...++-.++|.+|
T Consensus       128 ~p~s~~slsVhql~L~~~~~~~~n~----VN-~~De~GfTpLiWAaa~G~i~vV~fLL~~--GAdp~~lgk~resALsLA  200 (296)
T KOG0502|consen  128 MPWSPLSLSVHQLHLDVVDLLVNNK----VN-ACDEFGFTPLIWAAAKGHIPVVQFLLNS--GADPDALGKYRESALSLA  200 (296)
T ss_pred             ccCChhhHHHHHHHHHHHHHHhhcc----cc-CccccCchHhHHHHhcCchHHHHHHHHc--CCChhhhhhhhhhhHhHH
Confidence            5578888888888777766555543    33 4789999999999999999999999999  999999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      +..|..++|++|+..+.+ ++..|.+|.|||.||++.++.+|++.|+..|+ ....+.-|..++..|+..|+- +++++|
T Consensus       201 t~ggytdiV~lLL~r~vd-VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvi  278 (296)
T KOG0502|consen  201 TRGGYTDIVELLLTREVD-VNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVI  278 (296)
T ss_pred             hcCChHHHHHHHHhcCCC-cceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHH
Confidence            999999999999999999 89999999999999999999999999999999 555555677788888777764 555554


Q ss_pred             c
Q 037194          214 K  214 (215)
Q Consensus       214 ~  214 (215)
                      +
T Consensus       279 e  279 (296)
T KOG0502|consen  279 E  279 (296)
T ss_pred             H
Confidence            3

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.87  E-value=7.4e-22  Score=168.68  Aligned_cols=155  Identities=20%  Similarity=0.205  Sum_probs=134.9

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.|+||.|+..|+.+.++.+++.+ ...  ......+.+++|.|...+....++.+++.  |.+++.++..|.||||.
T Consensus       472 ~~G~T~Lhlaaq~Gh~~~~~llle~~-~~~--~~~~~~~l~~lhla~~~~~v~~~~~l~~~--ga~v~~~~~r~~TpLh~  546 (1143)
T KOG4177|consen  472 KQGFTPLHLAAQEGHTEVVQLLLEGG-AND--NLDAKKGLTPLHLAADEDTVKVAKILLEH--GANVDLRTGRGYTPLHV  546 (1143)
T ss_pred             cccCcchhhhhccCCchHHHHhhhcC-Ccc--CccchhccchhhhhhhhhhHHHHHHHhhc--CCceehhcccccchHHH
Confidence            56778888888888888777777766 222  23456677788888888888888888887  88999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+.+|+.++|++|+++|++ ++..+..|+||||.|+..|+.+|+.+|+++|+ .+..+.+++|+++.|+..|+++++.++
T Consensus       547 A~~~g~v~~VkfLLe~gAd-v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l  625 (1143)
T KOG4177|consen  547 AVHYGNVDLVKFLLEHGAD-VNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLL  625 (1143)
T ss_pred             HHhcCCchHHHHhhhCCcc-ccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHH
Confidence            9999999999999999999 89999999999999999999999999999999 888889999999999999999999887


Q ss_pred             hc
Q 037194          213 FK  214 (215)
Q Consensus       213 l~  214 (215)
                      +.
T Consensus       626 ~~  627 (1143)
T KOG4177|consen  626 KV  627 (1143)
T ss_pred             Hh
Confidence            63

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.87  E-value=6.5e-21  Score=144.61  Aligned_cols=146  Identities=11%  Similarity=0.089  Sum_probs=116.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhh--cCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccc-cCCCchhhHHH
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAA--ITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQ-DENGNTAFCFA  134 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~--~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~-~~~g~t~l~~a  134 (215)
                      ++|+.|+..|+.++++.|++.| .......  .+..|.||||+|+..++.+++++|++.  |++++.+ +..|.||||+|
T Consensus        35 ~lL~~A~~~~~~eivk~LL~~G-AdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~--GADVN~~~~~~g~TpLh~A  111 (300)
T PHA02884         35 NILYSSIKFHYTDIIDAILKLG-ADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRY--GADVNRYAEEAKITPLYIS  111 (300)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCC-CCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCcCcccCCCCCCHHHHH
Confidence            6788888889999999999999 5443210  145899999999999999999999999  9999986 46799999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCCCCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      +..++.+++++|++.|++ ++..|..|.||||+|+..++.+++..+...+.   . ..+.++...+   +..++++.|+.
T Consensus       112 a~~~~~eivklLL~~GAd-in~kd~~G~TpL~~A~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~---~n~ei~~~Lis  183 (300)
T PHA02884        112 VLHGCLKCLEILLSYGAD-INIQTNDMVTPIELALMICNNFLAFMICDNEI---S-NFYKHPKKIL---INFDILKILVS  183 (300)
T ss_pred             HHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHhCChhHHHHhcCCcc---c-ccccChhhhh---ccHHHHHHHHH
Confidence            999999999999999999 79999999999999999999888766653321   1 2223344433   24566666654

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.87  E-value=6.1e-21  Score=156.53  Aligned_cols=155  Identities=12%  Similarity=0.057  Sum_probs=124.9

Q ss_pred             cccHHHHHHHHcC------CHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhc---CCHHHHHHHHHccCCCCc-cccc
Q 037194           55 SERLLLYKAALKG------EMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGA---KQTSFVQQLLTFMDPEDL-MLQD  124 (215)
Q Consensus        55 ~g~~~L~~a~~~g------~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~---g~~~~v~~Ll~~~~~~~~-~~~~  124 (215)
                      .+.||||.|+..+      ..++++.|++.| ...  ..++..|.||||.|+..   ++.+++++|++.  |+++ +.+|
T Consensus        68 ~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~G-adi--n~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~--Gadin~~~d  142 (494)
T PHA02989         68 YIETPLCAVLRNREITSNKIKKIVKLLLKFG-ADI--NLKTFNGVSPIVCFIYNSNINNCDMLRFLLSK--GINVNDVKN  142 (494)
T ss_pred             CCCCcHHHHHhccCcchhhHHHHHHHHHHCC-CCC--CCCCCCCCcHHHHHHHhcccCcHHHHHHHHHC--CCCcccccC
Confidence            4578999887654      467899999998 544  24688899999988765   578999999998  9999 7889


Q ss_pred             CCCchhhHHHHhc--CcHHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHhC----CHHHHHHHhhcCC-CCC--------
Q 037194          125 ENGNTAFCFAAAV--GAVDIANLMLKKNPSLLGI-RGSKNMPPLYFAALFG----QTDTASFLFHKSE-KEL--------  188 (215)
Q Consensus       125 ~~g~t~l~~a~~~--~~~~~~~~Ll~~~~~~~~~-~~~~g~t~l~~a~~~g----~~~~v~~Ll~~~~-~~~--------  188 (215)
                      ..|+||||+|+..  ++.+++++|++.|++ ++. .+..|.||||+|+..+    +.+++++|+++|+ ...        
T Consensus       143 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gad-i~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~  221 (494)
T PHA02989        143 SRGYNLLHMYLESFSVKKDVIKILLSFGVN-LFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESV  221 (494)
T ss_pred             CCCCCHHHHHHHhccCCHHHHHHHHHcCCC-ccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccH
Confidence            9999999998754  578999999999998 566 6778999999988764    7899999999987 221        


Q ss_pred             ------------------------------CCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          189 ------------------------------PTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       189 ------------------------------~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                                                    .+..|.||+|.|+..+..+++++||++
T Consensus       222 l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~  278 (494)
T PHA02989        222 LESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKL  278 (494)
T ss_pred             HHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHc
Confidence                                          234477888888888889999988863

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.85  E-value=2e-20  Score=131.92  Aligned_cols=125  Identities=11%  Similarity=0.020  Sum_probs=108.8

Q ss_pred             cCCCCccHHHHHHhcCCH----HHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHH---HHHHHHHhCCCCCCCCC-C
Q 037194           88 ITEGHQTVLHVATGAKQT----SFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVD---IANLMLKKNPSLLGIRG-S  159 (215)
Q Consensus        88 ~~~~g~~~L~~a~~~g~~----~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~---~~~~Ll~~~~~~~~~~~-~  159 (215)
                      .+..+.+++|.||..|+.    +++++|++.  +.+++.+|..|+||||+|+..|+.+   ++++|++.|++ ++..+ .
T Consensus        16 ~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~--g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad-in~~d~~   92 (166)
T PHA02743         16 IDEDEQNTFLRICRTGNIYELMEVAPFISGD--GHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD-INARELG   92 (166)
T ss_pred             hccCCCcHHHHHHHcCCHHHHHHHHHHHhhc--chhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC-CCCCCCC
Confidence            456788899999999998    566677777  7888999999999999999998755   48999999999 78887 5


Q ss_pred             CCCCHHHHHHHhCCHHHHHHHhh-cCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          160 KNMPPLYFAALFGQTDTASFLFH-KSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       160 ~g~t~l~~a~~~g~~~~v~~Ll~-~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      .|.||||+|+..|+.+++++|+. .|+ ....+..+.+|++.|+..++.+++..|+++
T Consensus        93 ~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~  150 (166)
T PHA02743         93 TGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRAN  150 (166)
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            89999999999999999999995 677 666778889999999999999999999863

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.85  E-value=1.9e-20  Score=161.54  Aligned_cols=139  Identities=17%  Similarity=0.118  Sum_probs=119.5

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||.|+..|+.++++.|++.+ ...  ..+|..|+||||+|+..|+.+++++|+..  +...+  ...+.++||+
T Consensus       556 ~~G~TpLh~Aa~~g~~~~v~~Ll~~g-adi--n~~d~~G~TpL~~A~~~g~~~iv~~L~~~--~~~~~--~~~~~~~L~~  628 (823)
T PLN03192        556 SKGRTPLHIAASKGYEDCVLVLLKHA-CNV--HIRDANGNTALWNAISAKHHKIFRILYHF--ASISD--PHAAGDLLCT  628 (823)
T ss_pred             CCCCCHHHHHHHcChHHHHHHHHhcC-CCC--CCcCCCCCCHHHHHHHhCCHHHHHHHHhc--CcccC--cccCchHHHH
Confidence            57899999999999999999999998 443  35788999999999999999999999987  54433  3457799999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCC-chHHHHH
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDR-KVIFITS  200 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~-~~~~~~a  200 (215)
                      |+..|+.+++++|++.|++ ++..|.+|.||||+|+..|+.+++++|+++|+ ....+..+ .++...+
T Consensus       629 Aa~~g~~~~v~~Ll~~Gad-in~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~  696 (823)
T PLN03192        629 AAKRNDLTAMKELLKQGLN-VDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELR  696 (823)
T ss_pred             HHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Confidence            9999999999999999999 79999999999999999999999999999999 44444333 5555544

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.85  E-value=2.7e-21  Score=135.75  Aligned_cols=125  Identities=21%  Similarity=0.172  Sum_probs=113.9

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      +.|.|||.||+..|+++.|++||+.| ..+.  ...+...++|.+|+..|..++|++|+++  +.++|.-|.+|-|||-|
T Consensus       158 e~GfTpLiWAaa~G~i~vV~fLL~~G-Adp~--~lgk~resALsLAt~ggytdiV~lLL~r--~vdVNvyDwNGgTpLly  232 (296)
T KOG0502|consen  158 EFGFTPLIWAAAKGHIPVVQFLLNSG-ADPD--ALGKYRESALSLATRGGYTDIVELLLTR--EVDVNVYDWNGGTPLLY  232 (296)
T ss_pred             ccCchHhHHHHhcCchHHHHHHHHcC-CChh--hhhhhhhhhHhHHhcCChHHHHHHHHhc--CCCcceeccCCCceeee
Confidence            46889999999999999999999999 5543  3567788999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |++.++.+|++.|+..|++ +...+..|.+++..|+..|+. +|+..+++-+
T Consensus       233 Avrgnhvkcve~Ll~sGAd-~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~  282 (296)
T KOG0502|consen  233 AVRGNHVKCVESLLNSGAD-VTQEDDSGYWIMDLAVALGYR-IVQQVIEKHA  282 (296)
T ss_pred             eecCChHHHHHHHHhcCCC-cccccccCCcHHHHHHHhhhH-HHHHHHHHHH
Confidence            9999999999999999999 799999999999999999998 6666666544

>PHA02795 ankyrin-like protein; Provisional

Probab=99.84  E-value=2.1e-20  Score=147.33  Aligned_cols=127  Identities=14%  Similarity=0.080  Sum_probs=113.3

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhh----cCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchh
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAA----ITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTA  130 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~----~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~  130 (215)
                      .+.|+||.|+..|+.++++.|+..| .......    .+..+.+++|.|+..++.+++++|+..  |++++.+|..|.||
T Consensus       148 ~~~t~lh~A~~~~~~eIVk~Lls~G-a~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~--GADIN~kD~~G~Tp  224 (437)
T PHA02795        148 ECLNAYFRGICKKESSVVEFILNCG-IPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPY--IEDINQLDAGGRTL  224 (437)
T ss_pred             CCCCHHHHHHHcCcHHHHHHHHhcC-CcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhC--cCCcCcCCCCCCCH
Confidence            4469999999999999999999998 4322211    013477899999999999999999999  99999999999999


Q ss_pred             hHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCC--------HHHHHHHhhcCC
Q 037194          131 FCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQ--------TDTASFLFHKSE  185 (215)
Q Consensus       131 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~--------~~~v~~Ll~~~~  185 (215)
                      ||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+        .+++++|+++|+
T Consensus       225 Lh~Aa~~g~~eiVelLL~~GAd-IN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ga  286 (437)
T PHA02795        225 LYRAIYAGYIDLVSWLLENGAN-VNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPL  286 (437)
T ss_pred             HHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCC
Confidence            9999999999999999999999 79999999999999999984        699999999987

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.83  E-value=1.6e-19  Score=136.99  Aligned_cols=123  Identities=14%  Similarity=0.115  Sum_probs=106.9

Q ss_pred             hcCCCCcc-HHHHHHhcCCHHHHHHHHHccCCCCccccc----CCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCC-CCC
Q 037194           87 AITEGHQT-VLHVATGAKQTSFVQQLLTFMDPEDLMLQD----ENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIR-GSK  160 (215)
Q Consensus        87 ~~~~~g~~-~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~----~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~  160 (215)
                      .++..+++ +||.|+..|+.+++++|++.  |++++.++    ..|.||||+|+..++.+++++|++.|++ ++.. +..
T Consensus        27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~--GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GAD-VN~~~~~~  103 (300)
T PHA02884         27 KKNKICIANILYSSIKFHYTDIIDAILKL--GADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGAD-VNRYAEEA  103 (300)
T ss_pred             ccCcCCCCHHHHHHHHcCCHHHHHHHHHC--CCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cCcccCCC
Confidence            35666666 57888888999999999999  99999874    5899999999999999999999999999 7875 457


Q ss_pred             CCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          161 NMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       161 g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |.||||+|+..++.+++++|+..|+ ....+..|.||++.|+..+..+++..+
T Consensus       104 g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~  156 (300)
T PHA02884        104 KITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMI  156 (300)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHh
Confidence            9999999999999999999999999 667777888999988887777776554

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.83  E-value=5.9e-20  Score=128.20  Aligned_cols=126  Identities=10%  Similarity=0.072  Sum_probs=102.1

Q ss_pred             hcCCCCccHHHHHHhcCCHHHHHHHHHc--c---CCCCcccccCCCchhhHHHHhcCcH---HHHHHHHHhCCCCCCCCC
Q 037194           87 AITEGHQTVLHVATGAKQTSFVQQLLTF--M---DPEDLMLQDENGNTAFCFAAAVGAV---DIANLMLKKNPSLLGIRG  158 (215)
Q Consensus        87 ~~~~~g~~~L~~a~~~g~~~~v~~Ll~~--~---~~~~~~~~~~~g~t~l~~a~~~~~~---~~~~~Ll~~~~~~~~~~~  158 (215)
                      ..+..|.||||+|+..|+..  ..+...  .   .+..++.+|..|.||||+|+..++.   +++++|++.|++ ++..+
T Consensus        12 ~~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad-in~~~   88 (154)
T PHA02736         12 EPDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD-INGKE   88 (154)
T ss_pred             hcCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC-ccccC
Confidence            46788999999999999843  332221  0   0112345688999999999999986   468999999999 78887


Q ss_pred             -CCCCCHHHHHHHhCCHHHHHHHhhc-CC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          159 -SKNMPPLYFAALFGQTDTASFLFHK-SE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       159 -~~g~t~l~~a~~~g~~~~v~~Ll~~-~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                       ..|.||||+|+..++.+++++|+.. ++ ....+..|.++++.|+..++.+++..|+++
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~  148 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAK  148 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence             4899999999999999999999985 66 666778888999999999999999998863

>PHA02730 ankyrin-like protein; Provisional

Probab=99.82  E-value=4.5e-19  Score=146.19  Aligned_cols=160  Identities=9%  Similarity=0.032  Sum_probs=127.9

Q ss_pred             ccCcccHHHHHHHHcC---CHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcC--CHHHHHHHHHccCCCCcccccCC
Q 037194           52 LCCSERLLLYKAALKG---EMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAK--QTSFVQQLLTFMDPEDLMLQDEN  126 (215)
Q Consensus        52 ~~~~g~~~L~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g--~~~~v~~Ll~~~~~~~~~~~~~~  126 (215)
                      ....|+||||+|+..|   +.++++.|++.| +...  .+|..|+||||+|+..+  +.+++++|++.+.+++++..+..
T Consensus        37 kd~~G~TaLh~A~~~~~~~~~eivklLLs~G-Adin--~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~  113 (672)
T PHA02730         37 IDRRGNNALHCYVSNKCDTDIKIVRLLLSRG-VERL--CRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNI  113 (672)
T ss_pred             cCCCCCcHHHHHHHcCCcCcHHHHHHHHhCC-CCCc--ccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccccccc
Confidence            3357899999999997   599999999999 5553  57899999999999976  79999999999555566877888


Q ss_pred             CchhhHHHHh--cCcHHHHHHHHH-hCCCCCCCCC-----CCCCCHHHHHHHhCCHHHHHHHhhcCC-CC--------CC
Q 037194          127 GNTAFCFAAA--VGAVDIANLMLK-KNPSLLGIRG-----SKNMPPLYFAALFGQTDTASFLFHKSE-KE--------LP  189 (215)
Q Consensus       127 g~t~l~~a~~--~~~~~~~~~Ll~-~~~~~~~~~~-----~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~--------~~  189 (215)
                      +++|++.++.  +++.+++++|+. .+.+ ++...     ..|.+|++++...++.++|++|+++|+ ..        .+
T Consensus       114 ~d~~l~~y~~s~n~~~~~vk~Li~~~~~~-~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~  192 (672)
T PHA02730        114 NDFDLYSYMSSDNIDLRLLKYLIVDKRIR-PSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYD  192 (672)
T ss_pred             CCchHHHHHHhcCCcHHHHHHHHHhcCCC-hhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccccccc
Confidence            9999999988  888999999997 4455 44432     278999999999999999999999999 31        33


Q ss_pred             CCCCchHHHHHH------hcCchhHHHHhhcC
Q 037194          190 TEDRKVIFITSV------DTGLYGKYQDIFKR  215 (215)
Q Consensus       190 ~~~~~~~~~~a~------~~~~~~~~~~ll~~  215 (215)
                      +....|+++.++      ..+..++++.||++
T Consensus       193 ~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~  224 (672)
T PHA02730        193 SDRCKNSLHYYILSHRESESLSKDVIKCLIDN  224 (672)
T ss_pred             CCccchhHHHHHHhhhhhhccCHHHHHHHHHC
Confidence            444556666333      34567888888864

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.81  E-value=2.4e-20  Score=136.15  Aligned_cols=110  Identities=27%  Similarity=0.306  Sum_probs=81.6

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      +.|.+|||||++.|+..+++.|+.+| ....  ..+-...||||+|+.+||.++|+.|+..  .+|+|..+..|+|||||
T Consensus        32 dhgfsplhwaakegh~aivemll~rg-arvn--~tnmgddtplhlaaahghrdivqkll~~--kadvnavnehgntplhy  106 (448)
T KOG0195|consen   32 DHGFSPLHWAAKEGHVAIVEMLLSRG-ARVN--STNMGDDTPLHLAAAHGHRDIVQKLLSR--KADVNAVNEHGNTPLHY  106 (448)
T ss_pred             ccCcchhhhhhhcccHHHHHHHHhcc-cccc--cccCCCCcchhhhhhcccHHHHHHHHHH--hcccchhhccCCCchhh
Confidence            46677778888777777777777777 4432  2455566777888777877777777777  77777777777788888


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAA  169 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~  169 (215)
                      ||.-|.-.+++-|+..|+. +++.+.+|.|||..|-
T Consensus       107 acfwgydqiaedli~~ga~-v~icnk~g~tpldkak  141 (448)
T KOG0195|consen  107 ACFWGYDQIAEDLISCGAA-VNICNKKGMTPLDKAK  141 (448)
T ss_pred             hhhhcHHHHHHHHHhccce-eeecccCCCCchhhhc
Confidence            8777777777777777777 6777777777777663

>PHA02917 ankyrin-like protein; Provisional

Probab=99.81  E-value=9.1e-19  Score=146.78  Aligned_cols=150  Identities=11%  Similarity=0.090  Sum_probs=115.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHH--HhcCCHHHHHHHHHccCCCCcccccC---CC-----
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVA--TGAKQTSFVQQLLTFMDPEDLMLQDE---NG-----  127 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a--~~~g~~~~v~~Ll~~~~~~~~~~~~~---~g-----  127 (215)
                      ++++.|+..|+.++++.|++.| ...  ..++..|+||||.+  +..|+.+++++|++.  |++++..|.   .|     
T Consensus       105 ~~~~~a~~~~~~e~vk~Ll~~G-adi--n~~d~~g~T~L~~~~a~~~~~~eivklLi~~--Ga~vn~~d~~~~~g~~~~~  179 (661)
T PHA02917        105 IFSYMKSKNVDVDLIKVLVEHG-FDL--SVKCENHRSVIENYVMTDDPVPEIIDLFIEN--GCSVLYEDEDDEYGYAYDD  179 (661)
T ss_pred             hHHHHHhhcCCHHHHHHHHHcC-CCC--CccCCCCccHHHHHHHccCCCHHHHHHHHHc--CCCcccccccccccccccc
Confidence            5566777778888888888888 443  24688999999954  457899999999999  999886543   34     


Q ss_pred             ------chhhHHHHh-----------cCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCH--HHHHHHhhcCC-CC
Q 037194          128 ------NTAFCFAAA-----------VGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQT--DTASFLFHKSE-KE  187 (215)
Q Consensus       128 ------~t~l~~a~~-----------~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~--~~v~~Ll~~~~-~~  187 (215)
                            .||||+|+.           .++.+++++|++.|++ ++..|.+|.||||+|+..|+.  ++|++|++ |+ ..
T Consensus       180 ~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gad-vn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~  257 (661)
T PHA02917        180 YQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIK-PSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNT  257 (661)
T ss_pred             ccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCC-cccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCccc
Confidence                  599999986           4588999999999999 899999999999999999985  79999975 65 21


Q ss_pred             ----CCCCCCchHHHHHHh-------c--CchhHHHHhhc
Q 037194          188 ----LPTEDRKVIFITSVD-------T--GLYGKYQDIFK  214 (215)
Q Consensus       188 ----~~~~~~~~~~~~a~~-------~--~~~~~~~~ll~  214 (215)
                          ..+..+.++.+.+..       .  .+.++++.||+
T Consensus       258 ~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~  297 (661)
T PHA02917        258 AYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLE  297 (661)
T ss_pred             ccccccCcccccchHHHHHHHhhccccccchHHHHHHHHh
Confidence                233344454454442       1  15688888875

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.81  E-value=1.9e-19  Score=154.14  Aligned_cols=155  Identities=22%  Similarity=0.247  Sum_probs=117.1

Q ss_pred             cccHHHHHHHHcC-CHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           55 SERLLLYKAALKG-EMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        55 ~g~~~L~~a~~~g-~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      .|.|++|.|+..| ..+....++..+ ...  ......|.||||+|+..|+.++++.|++.  +...+.....|.+++|.
T Consensus       439 lG~T~lhvaa~~g~~~~~~~~l~~~g-~~~--n~~s~~G~T~Lhlaaq~Gh~~~~~llle~--~~~~~~~~~~~l~~lhl  513 (1143)
T KOG4177|consen  439 LGYTPLHVAAKKGRYLQIARLLLQYG-ADP--NAVSKQGFTPLHLAAQEGHTEVVQLLLEG--GANDNLDAKKGLTPLHL  513 (1143)
T ss_pred             cCCChhhhhhhcccHhhhhhhHhhcC-CCc--chhccccCcchhhhhccCCchHHHHhhhc--CCccCccchhccchhhh
Confidence            4556666666666 445555555544 221  23455677777777777777777777766  55555555666777777


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      +...+...+++.+++.|+. ++.++..|.||||+|+.+|+.++|++|+++|+ ...++..|.||+|.|+..|+.++++.|
T Consensus       514 a~~~~~v~~~~~l~~~ga~-v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LL  592 (1143)
T KOG4177|consen  514 AADEDTVKVAKILLEHGAN-VDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELL  592 (1143)
T ss_pred             hhhhhhHHHHHHHhhcCCc-eehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHH
Confidence            7777777777777777887 68899999999999999999999999999999 777778999999999999999999999


Q ss_pred             hcC
Q 037194          213 FKR  215 (215)
Q Consensus       213 l~~  215 (215)
                      +++
T Consensus       593 lk~  595 (1143)
T KOG4177|consen  593 LKH  595 (1143)
T ss_pred             HHc
Confidence            875

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.81  E-value=6.3e-19  Score=111.61  Aligned_cols=88  Identities=35%  Similarity=0.471  Sum_probs=55.5

Q ss_pred             HHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCc
Q 037194           60 LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGA  139 (215)
Q Consensus        60 L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~  139 (215)
                      ||+|+..|+.++++.|++.+ ...     +. |.||||+|+.+|+.+++++|++.  +.+++.+|..|+||||+|+..++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~-~~~-----~~-~~~~l~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~   71 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKG-ADI-----NL-GNTALHYAAENGNLEIVKLLLEN--GADINSQDKNGNTALHYAAENGN   71 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTT-STT-----TS-SSBHHHHHHHTTTHHHHHHHHHT--TTCTT-BSTTSSBHHHHHHHTTH
T ss_pred             CHHHHHcCCHHHHHHHHHCc-CCC-----CC-CCCHHHHHHHcCCHHHHHHHHHh--cccccccCCCCCCHHHHHHHcCC
Confidence            56667777777777777655 211     11 56677777777777777777766  66666666666777777777777


Q ss_pred             HHHHHHHHHhCCCCCCCC
Q 037194          140 VDIANLMLKKNPSLLGIR  157 (215)
Q Consensus       140 ~~~~~~Ll~~~~~~~~~~  157 (215)
                      .+++++|++.|++ ++.+
T Consensus        72 ~~~~~~Ll~~g~~-~~~~   88 (89)
T PF12796_consen   72 LEIVKLLLEHGAD-VNIR   88 (89)
T ss_dssp             HHHHHHHHHTTT--TTSS
T ss_pred             HHHHHHHHHcCCC-CCCc
Confidence            7777777766666 4443

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.80  E-value=7.3e-19  Score=143.79  Aligned_cols=161  Identities=19%  Similarity=0.199  Sum_probs=141.2

Q ss_pred             cccCcccHHHHHHHHc---CCHHHHHHHHhhcchhhhhhh---cCCCCccHHHHHHhcCCHHHHHHHHHccCCCCccccc
Q 037194           51 KLCCSERLLLYKAALK---GEMKEIEGLFEKDYRSIICAA---ITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQD  124 (215)
Q Consensus        51 ~~~~~g~~~L~~a~~~---g~~~~~~~ll~~~~~~~~~~~---~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~  124 (215)
                      .++..|.|.||.|...   ++-++++.|++-. |...+..   ....|.||||+|+.+.+.++|++|++.  |+|++.+.
T Consensus       138 ~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~-p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~--gADV~aRa  214 (782)
T KOG3676|consen  138 ERGATGETLLHKALLNLSDGHNELARVLLEIF-PKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAA--GADVHARA  214 (782)
T ss_pred             cccchhhhHHHHHHhcCchhHHHHHHHHHHHh-HHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHc--CCchhhHh
Confidence            3478999999999984   4468999999987 6555432   245799999999999999999999999  89887641


Q ss_pred             -----------------------CCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHh
Q 037194          125 -----------------------ENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLF  181 (215)
Q Consensus       125 -----------------------~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll  181 (215)
                                             +.|..||.+|+..++.+++++|++.|++ ++.+|..|+|.||..+.+-..++..+++
T Consensus       215 ~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd-~~aqDS~GNTVLH~lVi~~~~~My~~~L  293 (782)
T KOG3676|consen  215 CGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGAD-PNAQDSNGNTVLHMLVIHFVTEMYDLAL  293 (782)
T ss_pred             hccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCC-CCccccCCChHHHHHHHHHHHHHHHHHH
Confidence                                   3577999999999999999999999999 8999999999999999998899999999


Q ss_pred             hcCC---CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          182 HKSE---KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       182 ~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      +.|+   ..+.+..|.||+-.|+.-|.-++.+.||++
T Consensus       294 ~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  294 ELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             hcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            9998   566888999999999999999999999975

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.80  E-value=1.2e-19  Score=135.97  Aligned_cols=126  Identities=17%  Similarity=0.172  Sum_probs=111.4

Q ss_pred             hcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc-----CcHHHHHHHHHhCCCCCCCCCCCC
Q 037194           87 AITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV-----GAVDIANLMLKKNPSLLGIRGSKN  161 (215)
Q Consensus        87 ~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~-----~~~~~~~~Ll~~~~~~~~~~~~~g  161 (215)
                      ..|.+|+|+|||++.++++++|+.||+.+ -|+++.+++.|+||+++++..     .++.+|.-|+.-|-. .-.....|
T Consensus       263 laDsNGNTALHYsVSHaNF~VV~~LLDSg-vC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnV-NaKAsQ~g  340 (452)
T KOG0514|consen  263 LADSNGNTALHYAVSHANFDVVSILLDSG-VCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDV-NAKASQHG  340 (452)
T ss_pred             hhcCCCCeeeeeeecccchHHHHHHhccC-cccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCc-chhhhhhc
Confidence            46899999999999999999999999984 689999999999999998654     357788888876654 22234579


Q ss_pred             CCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          162 MPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       162 ~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      +|+|++|+.+|+.++|+.||..|+ .++++.+|+|.++.|+.+|+.|++..||.
T Consensus       341 QTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA  394 (452)
T KOG0514|consen  341 QTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLA  394 (452)
T ss_pred             chhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhc
Confidence            999999999999999999999999 88999999999999999999999999985

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.80  E-value=9.6e-19  Score=110.75  Aligned_cols=83  Identities=27%  Similarity=0.430  Sum_probs=77.9

Q ss_pred             HHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHH
Q 037194           96 LHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTD  175 (215)
Q Consensus        96 L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~  175 (215)
                      ||+|+..|+.+++++|++.  +.+++.    |.||||+|+..|+.+++++|++.|++ ++..+..|+||||+|+..|+.+
T Consensus         1 L~~A~~~~~~~~~~~ll~~--~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~   73 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEK--GADINL----GNTALHYAAENGNLEIVKLLLENGAD-INSQDKNGNTALHYAAENGNLE   73 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHT--TSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTC-TT-BSTTSSBHHHHHHHTTHHH
T ss_pred             CHHHHHcCCHHHHHHHHHC--cCCCCC----CCCHHHHHHHcCCHHHHHHHHHhccc-ccccCCCCCCHHHHHHHcCCHH
Confidence            7999999999999999998  777766    88999999999999999999999999 7999999999999999999999


Q ss_pred             HHHHHhhcCC
Q 037194          176 TASFLFHKSE  185 (215)
Q Consensus       176 ~v~~Ll~~~~  185 (215)
                      ++++|+++|+
T Consensus        74 ~~~~Ll~~g~   83 (89)
T PF12796_consen   74 IVKLLLEHGA   83 (89)
T ss_dssp             HHHHHHHTTT
T ss_pred             HHHHHHHcCC
Confidence            9999999987

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PHA02730 ankyrin-like protein; Provisional

Probab=99.80  E-value=2.9e-18  Score=141.41  Aligned_cols=150  Identities=11%  Similarity=0.081  Sum_probs=122.0

Q ss_pred             HHHHHHHcC---CHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCC----HHHHHHHHHccCCC--CcccccCCCch
Q 037194           59 LLYKAALKG---EMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQ----TSFVQQLLTFMDPE--DLMLQDENGNT  129 (215)
Q Consensus        59 ~L~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~----~~~v~~Ll~~~~~~--~~~~~~~~g~t  129 (215)
                      .|+.-...+   +.++++.|+++| .....   +..|.||||+|+..+.    .+++++|+.+  |+  +++.+|..|.|
T Consensus       346 ~l~~Y~~~~~~v~ieIvelLIs~G-AdIN~---k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~--Ga~~dIN~kd~~G~T  419 (672)
T PHA02730        346 MLINYLHYGDMVSIPILRCMLDNG-ATMDK---TTDNNYPLHDYFVNNNNIVDVNVVRFIVEN--NGHMAINHVSNNGRL  419 (672)
T ss_pred             HHHHHHhcCCcCcHHHHHHHHHCC-CCCCc---CCCCCcHHHHHHHHcCCcchHHHHHHHHHc--CCCccccccccCCCc
Confidence            577777766   489999999999 55542   3689999999998875    8999999998  65  68999999999


Q ss_pred             hhHH---HHhcC---------cHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCC-CCch
Q 037194          130 AFCF---AAAVG---------AVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTE-DRKV  195 (215)
Q Consensus       130 ~l~~---a~~~~---------~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~-~~~~  195 (215)
                      |||.   +...+         ..+++++|+..|++ ++.+|..|.||||+|+..++.+++++|+++|+ ....+. .+.+
T Consensus       420 ~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GAD-INakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~T  498 (672)
T PHA02730        420 CMYGLILSRFNNCGYHCYETILIDVFDILSKYMDD-IDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINT  498 (672)
T ss_pred             hHhHHHHHHhccccccccchhHHHHHHHHHhcccc-hhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcC
Confidence            9984   33232         23579999999999 79999999999999999999999999999999 555554 5778


Q ss_pred             HHHHHHh--cCchhHHHHhhcC
Q 037194          196 IFITSVD--TGLYGKYQDIFKR  215 (215)
Q Consensus       196 ~~~~a~~--~~~~~~~~~ll~~  215 (215)
                      +++.+..  .+..++++.||++
T Consensus       499 aL~~Aa~~~~~~~eIv~~LLs~  520 (672)
T PHA02730        499 AIQKSSYRRENKTKLVDLLLSY  520 (672)
T ss_pred             HHHHHHHhhcCcHHHHHHHHHc
Confidence            8887765  3678899988864

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.79  E-value=4.4e-19  Score=143.85  Aligned_cols=154  Identities=21%  Similarity=0.184  Sum_probs=136.6

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      +|.|.||.|+.+|+.++++.|++.. +...  ..+..|.+|||+|++.|+.++++.++..  ...+|.+...|.||||.|
T Consensus        48 ~gfTalhha~Lng~~~is~llle~e-a~ld--l~d~kg~~plhlaaw~g~~e~vkmll~q--~d~~na~~~e~~tplhla  122 (854)
T KOG0507|consen   48 SGFTLLHHAVLNGQNQISKLLLDYE-ALLD--LCDTKGILPLHLAAWNGNLEIVKMLLLQ--TDILNAVNIENETPLHLA  122 (854)
T ss_pred             cchhHHHHHHhcCchHHHHHHhcch-hhhh--hhhccCcceEEehhhcCcchHHHHHHhc--ccCCCcccccCcCccchh
Confidence            7889999999999999999999987 3332  4568899999999999999999999998  788899999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC---------CCCCCCCCchHHHHHHhcCc
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE---------KELPTEDRKVIFITSVDTGL  205 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~---------~~~~~~~~~~~~~~a~~~~~  205 (215)
                      +.+|+.+++.+|+.+|++ .-+.|..+.|+|.+|++.|..++++.|++..-         .......+.+++|.|...|+
T Consensus       123 aqhgh~dvv~~Ll~~~ad-p~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh  201 (854)
T KOG0507|consen  123 AQHGHLEVVFYLLKKNAD-PFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGH  201 (854)
T ss_pred             hhhcchHHHHHHHhcCCC-ccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcch
Confidence            999999999999999999 78999999999999999999999999998732         12244456788899999999


Q ss_pred             hhHHHHhhc
Q 037194          206 YGKYQDIFK  214 (215)
Q Consensus       206 ~~~~~~ll~  214 (215)
                      .++.+.|++
T Consensus       202 ~~~~~~ll~  210 (854)
T KOG0507|consen  202 VECMQALLE  210 (854)
T ss_pred             HHHHHHHHh
Confidence            999988875

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.79  E-value=5e-19  Score=138.61  Aligned_cols=148  Identities=22%  Similarity=0.253  Sum_probs=126.4

Q ss_pred             ccCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccC---------------
Q 037194           52 LCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMD---------------  116 (215)
Q Consensus        52 ~~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~---------------  116 (215)
                      ...+|.|+||-++...+.++|++|++.+ ....  ..|..|+||||.|+.-|+..++++|+..+.               
T Consensus        69 ~n~DglTalhq~~id~~~e~v~~l~e~g-a~Vn--~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl  145 (527)
T KOG0505|consen   69 CNVDGLTALHQACIDDNLEMVKFLVENG-ANVN--AQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDL  145 (527)
T ss_pred             cCCccchhHHHHHhcccHHHHHHHHHhc-CCcc--ccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCcccc
Confidence            3468899999999999999999999999 5554  468889999999999999999999999721               


Q ss_pred             ------------------------------------------CCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCC
Q 037194          117 ------------------------------------------PEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLL  154 (215)
Q Consensus       117 ------------------------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~  154 (215)
                                                                |...++.+..|.|.||+|+.+|..+++++|+..|.+ +
T Consensus       146 ~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~-~  224 (527)
T KOG0505|consen  146 AEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYS-V  224 (527)
T ss_pred             ccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccC-c
Confidence                                                      222344455689999999999999999999999999 7


Q ss_pred             CCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhc
Q 037194          155 GIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDT  203 (215)
Q Consensus       155 ~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~  203 (215)
                      +..|.+||||||.|+.+|..++++.|+++|+ -......+.+++..|...
T Consensus       225 ~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  225 NIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             ccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhh
Confidence            9999999999999999999999999999998 666667777887777553

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.78  E-value=1.2e-18  Score=136.47  Aligned_cols=152  Identities=20%  Similarity=0.263  Sum_probs=137.2

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      -.+..|+..|+.+-+..|+..+ ..+  ...+.+|.|+||.+|.-.+.+||++|++.  +.++|.+|..||||+|.|+.-
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~g-a~~--~~~n~DglTalhq~~id~~~e~v~~l~e~--ga~Vn~~d~e~wtPlhaaasc  116 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRG-ASP--NLCNVDGLTALHQACIDDNLEMVKFLVEN--GANVNAQDNEGWTPLHAAASC  116 (527)
T ss_pred             HHHHhccccccHHHHHHHhccC-CCc--cccCCccchhHHHHHhcccHHHHHHHHHh--cCCccccccccCCcchhhccc
Confidence            4578889999999999999998 555  35789999999999999999999999999  999999999999999999999


Q ss_pred             CcHHHHHHHHHhCCCCC----------------------------------------------------------CCCCC
Q 037194          138 GAVDIANLMLKKNPSLL----------------------------------------------------------GIRGS  159 (215)
Q Consensus       138 ~~~~~~~~Ll~~~~~~~----------------------------------------------------------~~~~~  159 (215)
                      |+..++++|+..|+++.                                                          ...+.
T Consensus       117 g~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~  196 (527)
T KOG0505|consen  117 GYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHA  196 (527)
T ss_pred             ccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcccccccccc
Confidence            99999999999887632                                                          33445


Q ss_pred             CCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          160 KNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       160 ~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      .|.|.||+|+..|+.++.++|++.|. ...++.+|.+|+|+|+.-|+.+++++|++
T Consensus       197 rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~  252 (527)
T KOG0505|consen  197 RGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVE  252 (527)
T ss_pred             ccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHH
Confidence            69999999999999999999999998 88899999999999999999999997765

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.78  E-value=1.1e-18  Score=149.70  Aligned_cols=122  Identities=14%  Similarity=0.120  Sum_probs=105.5

Q ss_pred             CCCccHHHHHHhcCCHHHHHHHHHccCCCCccccc--------------CCCchhhHHHHhcCcHHHHHHHHHhCCCCCC
Q 037194           90 EGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQD--------------ENGNTAFCFAAAVGAVDIANLMLKKNPSLLG  155 (215)
Q Consensus        90 ~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~--------------~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~  155 (215)
                      ..|.||||+|+..|+.++|++|++.  |++++.++              ..|.||||+|+..++.+++++|++.|++ ++
T Consensus       126 ~~G~TpLhlAa~~~~~eiVklLL~~--GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad-in  202 (743)
T TIGR00870       126 TPGITALHLAAHRQNYEIVKLLLER--GASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD-IL  202 (743)
T ss_pred             CCCCcHHHHHHHhCCHHHHHHHHhC--CCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc-hh
Confidence            3589999999999999999999999  88888653              3589999999999999999999999998 79


Q ss_pred             CCCCCCCCHHHHHHHhC---------CHHHHHHHhhcCC----C----CCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          156 IRGSKNMPPLYFAALFG---------QTDTASFLFHKSE----K----ELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       156 ~~~~~g~t~l~~a~~~g---------~~~~v~~Ll~~~~----~----~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      ..|..|+||||+|+..+         ...+.++++..++    .    ...+.+|.+|++.|+..|+.++++.||+
T Consensus       203 ~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~  278 (743)
T TIGR00870       203 TADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLA  278 (743)
T ss_pred             hHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHH
Confidence            99999999999999987         2346667776655    1    4567888999999999999999999986

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.78  E-value=1.6e-17  Score=111.31  Aligned_cols=120  Identities=28%  Similarity=0.399  Sum_probs=74.9

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .|.++|+.|+..|+.+.++.|++.+ ...  ...+..|.+|+|.|+..++.+++++|+..  +..++..+..|.||+|+|
T Consensus         6 ~g~t~l~~a~~~~~~~~i~~li~~~-~~~--~~~~~~g~~~l~~a~~~~~~~~~~~ll~~--~~~~~~~~~~~~~~l~~a   80 (126)
T cd00204           6 DGRTPLHLAASNGHLEVVKLLLENG-ADV--NAKDNDGRTPLHLAAKNGHLEIVKLLLEK--GADVNARDKDGNTPLHLA   80 (126)
T ss_pred             CCCCHHHHHHHcCcHHHHHHHHHcC-CCC--CccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHH
Confidence            4566666666666666666666665 222  23455666666666666666666666666  555555566666666666


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHH
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFL  180 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~L  180 (215)
                      +..++.+++++|+..+.. .+..+..+.||+++|...++.+++++|
T Consensus        81 ~~~~~~~~~~~L~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~L  125 (126)
T cd00204          81 ARNGNLDVVKLLLKHGAD-VNARDKDGRTPLHLAAKNGHLEVVKLL  125 (126)
T ss_pred             HHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence            666666666666666655 455556666666666666666666665

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.78  E-value=2.6e-18  Score=116.56  Aligned_cols=118  Identities=18%  Similarity=0.162  Sum_probs=102.9

Q ss_pred             cHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCC
Q 037194           94 TVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQ  173 (215)
Q Consensus        94 ~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~  173 (215)
                      ..+.+|+..+....|+.||+.- ..-+|.+|.+|.||||-|+.+|+.++++.|+..|++ .+.+...||||||-||...+
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~-an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn-~~a~T~~GWTPLhSAckWnN  142 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEK-ANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN-KEAKTNEGWTPLHSACKWNN  142 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhc-cccccccccccccHHHHHHhcCchHHHHHHHHccCC-cccccccCccchhhhhcccc
Confidence            3578999999999999999872 455899999999999999999999999999999999 79999999999999999999


Q ss_pred             HHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCch-hHHHHhh
Q 037194          174 TDTASFLFHKSE-KELPTEDRKVIFITSVDTGLY-GKYQDIF  213 (215)
Q Consensus       174 ~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~-~~~~~ll  213 (215)
                      .+++.+|+++|+ ......+..+|+|.++..... .-+.+||
T Consensus       143 ~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll  184 (228)
T KOG0512|consen  143 FEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLL  184 (228)
T ss_pred             hhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHh
Confidence            999999999999 777778888888877775543 4455554

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.78  E-value=1.2e-17  Score=111.98  Aligned_cols=123  Identities=24%  Similarity=0.337  Sum_probs=111.5

Q ss_pred             cCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 037194           88 ITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYF  167 (215)
Q Consensus        88 ~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~  167 (215)
                      .+..|.||||.|+..++.+++++|+..  +.+.+..+..|.+|+|+|+..++.+++++|+..++. .+..+..|.||+|+
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~--~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~~~~~l~~   79 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLEN--GADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD-VNARDKDGNTPLHL   79 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHH
Confidence            457799999999999999999999998  787788899999999999999999999999999987 67888899999999


Q ss_pred             HHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          168 AALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       168 a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      |+..++.+++++|+.++. ....+..+.++++.|...+..+++++|+
T Consensus        80 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          80 AARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            999999999999999986 5555577788999999999999998875

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.76  E-value=2.4e-18  Score=139.65  Aligned_cols=154  Identities=21%  Similarity=0.228  Sum_probs=136.8

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcc----------hhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCC
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDY----------RSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENG  127 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~----------~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g  127 (215)
                      +-+..|+..|+++.+..+|+...          +.+.....|.+|.|+||.|+..|+..++++|++.  .+.++..|..|
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~--ea~ldl~d~kg   82 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDY--EALLDLCDTKG   82 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcc--hhhhhhhhccC
Confidence            34788999999999999998631          1111224577899999999999999999999998  88889999999


Q ss_pred             chhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCch
Q 037194          128 NTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLY  206 (215)
Q Consensus       128 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~  206 (215)
                      .+|||+|+..|+.+++++|+..+.. .+..+..|.||||.|+++|+.+++.+|+++++ ....+..+.+++.+|+.-|..
T Consensus        83 ~~plhlaaw~g~~e~vkmll~q~d~-~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~  161 (854)
T KOG0507|consen   83 ILPLHLAAWNGNLEIVKMLLLQTDI-LNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRA  161 (854)
T ss_pred             cceEEehhhcCcchHHHHHHhcccC-CCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhh
Confidence            9999999999999999999999866 79999999999999999999999999999999 666777888999999999999


Q ss_pred             hHHHHhhc
Q 037194          207 GKYQDIFK  214 (215)
Q Consensus       207 ~~~~~ll~  214 (215)
                      +|++.|++
T Consensus       162 ~Vvq~ll~  169 (854)
T KOG0507|consen  162 EVVQMLLQ  169 (854)
T ss_pred             HHHHHHhh
Confidence            99999875

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.76  E-value=2.3e-18  Score=125.89  Aligned_cols=132  Identities=16%  Similarity=0.195  Sum_probs=115.1

Q ss_pred             HHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHH
Q 037194           64 ALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIA  143 (215)
Q Consensus        64 ~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~  143 (215)
                      ++.|+.-.|+..|+.. .... ...|..|.+||||||..|+..+++.|+.+  |+.+|..+....||||+|+.+|+.++|
T Consensus         8 cregna~qvrlwld~t-ehdl-n~gddhgfsplhwaakegh~aivemll~r--garvn~tnmgddtplhlaaahghrdiv   83 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDDT-EHDL-NVGDDHGFSPLHWAAKEGHVAIVEMLLSR--GARVNSTNMGDDTPLHLAAAHGHRDIV   83 (448)
T ss_pred             hhcCCeEEEEEEecCc-cccc-ccccccCcchhhhhhhcccHHHHHHHHhc--ccccccccCCCCcchhhhhhcccHHHH
Confidence            4556655555555544 2333 35788999999999999999999999999  999999998889999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHH
Q 037194          144 NLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITS  200 (215)
Q Consensus       144 ~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a  200 (215)
                      +.|+...++ ++..+..|.|||||||-.|+..+++-|+..|+ ..+.++.|.+|+..|
T Consensus        84 qkll~~kad-vnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka  140 (448)
T KOG0195|consen   84 QKLLSRKAD-VNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA  140 (448)
T ss_pred             HHHHHHhcc-cchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence            999999999 89999999999999999999999999999999 788888888887766

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.73  E-value=6.3e-17  Score=98.46  Aligned_cols=99  Identities=20%  Similarity=0.239  Sum_probs=58.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      ..+.|++..|.++.|+..+.++ .+..   ....|++|||+|+-+|..+++++|+..  |++++.+|++|-|||..|+..
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g-~nVn---~~~ggR~plhyAAD~GQl~ilefli~i--GA~i~~kDKygITPLLsAvwE   77 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEG-LNVN---EIYGGRTPLHYAADYGQLSILEFLISI--GANIQDKDKYGITPLLSAVWE   77 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHcc-ccHH---HHhCCcccchHhhhcchHHHHHHHHHh--ccccCCccccCCcHHHHHHHH
Confidence            3455666666666666666655 2222   233566666666666666666666666  666666666666666666666


Q ss_pred             CcHHHHHHHHHhCCCCCCCCCCCCCC
Q 037194          138 GAVDIANLMLKKNPSLLGIRGSKNMP  163 (215)
Q Consensus       138 ~~~~~~~~Ll~~~~~~~~~~~~~g~t  163 (215)
                      |+.+||++|+.+|++ -....-+|.+
T Consensus        78 GH~~cVklLL~~GAd-rt~~~PdG~~  102 (117)
T KOG4214|consen   78 GHRDCVKLLLQNGAD-RTIHAPDGTA  102 (117)
T ss_pred             hhHHHHHHHHHcCcc-cceeCCCchh
Confidence            666666666666665 2334344443

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.73  E-value=8e-17  Score=138.25  Aligned_cols=153  Identities=12%  Similarity=0.056  Sum_probs=109.9

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHH-HHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLH-VATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~-~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      .+...++.|+..|+.+.++.+++.+ ........|..|+|||| .|+.+++.++++.|++.  +.    .+..|.||||+
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~-~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~--g~----~~~~G~T~Lh~   88 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEP-KKLNINCPDRLGRSALFVAAIENENLELTELLLNL--SC----RGAVGDTLLHA   88 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccc-cccCCCCcCccchhHHHHHHHhcChHHHHHHHHhC--CC----CCCcChHHHHH
Confidence            4457789999999999999999873 21222356788999999 88888888999999887  54    56778999998


Q ss_pred             HHhcCc---HHHHHHHHHhCCCC---------CCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCC----------
Q 037194          134 AAAVGA---VDIANLMLKKNPSL---------LGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPT----------  190 (215)
Q Consensus       134 a~~~~~---~~~~~~Ll~~~~~~---------~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~----------  190 (215)
                      |+.++.   ..++..+...+...         ....+..|.||||+|+..|+.+++++|+++|+ .....          
T Consensus        89 A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~  168 (743)
T TIGR00870        89 ISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQG  168 (743)
T ss_pred             HHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCC
Confidence            887322   23444444433210         11123468899999999999999999999987 33221          


Q ss_pred             ----CCCchHHHHHHhcCchhHHHHhhc
Q 037194          191 ----EDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       191 ----~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                          ..+.++++.|+..++.+++..|++
T Consensus       169 ~~~~~~g~tpL~~Aa~~~~~~iv~lLl~  196 (743)
T TIGR00870       169 VDSFYHGESPLNAAACLGSPSIVALLSE  196 (743)
T ss_pred             CCcccccccHHHHHHHhCCHHHHHHHhc
Confidence                246678888888888888888875

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.72  E-value=6.5e-17  Score=98.40  Aligned_cols=103  Identities=15%  Similarity=0.218  Sum_probs=91.9

Q ss_pred             cHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCC
Q 037194           94 TVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQ  173 (215)
Q Consensus        94 ~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~  173 (215)
                      .-+.|++.+|..+-|+..+..  +.++|.. ..|++|||+|+-.|+.+++++|+..|++ ++.+|..|.|||.-|++.||
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~--g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~-i~~kDKygITPLLsAvwEGH   79 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNE--GLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGAN-IQDKDKYGITPLLSAVWEGH   79 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHc--cccHHHH-hCCcccchHhhhcchHHHHHHHHHhccc-cCCccccCCcHHHHHHHHhh
Confidence            457899999999999999888  7777764 4789999999999999999999999999 89999999999999999999


Q ss_pred             HHHHHHHhhcCC-CCCCCCCCchHHHHH
Q 037194          174 TDTASFLFHKSE-KELPTEDRKVIFITS  200 (215)
Q Consensus       174 ~~~v~~Ll~~~~-~~~~~~~~~~~~~~a  200 (215)
                      .++|++|++.|+ .....-+|++...++
T Consensus        80 ~~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   80 RDCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHHHcCcccceeCCCchhHHhhc
Confidence            999999999999 666667788776665

>PHA02792 ankyrin-like protein; Provisional

Probab=99.71  E-value=4e-16  Score=127.75  Aligned_cols=136  Identities=11%  Similarity=0.071  Sum_probs=111.0

Q ss_pred             HHHHHHHcC--CHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCC--chhhHHH
Q 037194           59 LLYKAALKG--EMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENG--NTAFCFA  134 (215)
Q Consensus        59 ~L~~a~~~g--~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g--~t~l~~a  134 (215)
                      .||.-...+  +.++++.|++.| ....    ......+++.|+..|+.+++++|++.  |++++.+|..|  .||||+|
T Consensus       309 ~l~~Yl~~~~v~ieiIK~LId~G-a~~~----r~~~~n~~~~Aa~~gn~eIVelLIs~--GADIN~kD~~g~~~TpLh~A  381 (631)
T PHA02792        309 LLSEYVSYHTVYINVIKCMIDEG-ATLY----RFKHINKYFQKFDNRDPKVVEYILKN--GNVVVEDDDNIINIMPLFPT  381 (631)
T ss_pred             HHHHHHhcCCccHHHHHHHHHCC-Cccc----cCCcchHHHHHHHcCCHHHHHHHHHc--CCchhhhcCCCCChhHHHHH
Confidence            366666666  578899999998 3321    22355678999999999999999999  99999988775  5899988


Q ss_pred             HhcCcH---HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHh
Q 037194          135 AAVGAV---DIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVD  202 (215)
Q Consensus       135 ~~~~~~---~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~  202 (215)
                      +.....   +++++|++.|++ ++.+|..|+||||+|+..++.+++++|+++|+ ....+..|.++++.|+.
T Consensus       382 ~~n~~~~v~~IlklLIs~GAD-IN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        382 LSIHESDVLSILKLCKPYIDD-INKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             HHhccHhHHHHHHHHHhcCCc-cccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            776654   468888999999 79999999999999999999999999999998 66677778888887764

>PHA02792 ankyrin-like protein; Provisional

Probab=99.68  E-value=6.4e-16  Score=126.59  Aligned_cols=124  Identities=8%  Similarity=0.153  Sum_probs=106.1

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCC--CccHHHHHHhcCCH---HHHHHHHHccCCCCcccccCCCchh
Q 037194           56 ERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEG--HQTVLHVATGAKQT---SFVQQLLTFMDPEDLMLQDENGNTA  130 (215)
Q Consensus        56 g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~--g~~~L~~a~~~g~~---~~v~~Ll~~~~~~~~~~~~~~g~t~  130 (215)
                      ....++.|+..|+.++++.|++.| +....  ++..  +.||||+|+.....   +++++|+..  |+++|.+|..|+||
T Consensus       339 ~~n~~~~Aa~~gn~eIVelLIs~G-ADIN~--kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~--GADIN~kD~~G~TP  413 (631)
T PHA02792        339 HINKYFQKFDNRDPKVVEYILKNG-NVVVE--DDDNIINIMPLFPTLSIHESDVLSILKLCKPY--IDDINKIDKHGRSI  413 (631)
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcC-Cchhh--hcCCCCChhHHHHHHHhccHhHHHHHHHHHhc--CCccccccccCcch
Confidence            457799999999999999999999 66533  4555  46999998877664   468888998  99999999999999


Q ss_pred             hHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH--hC--------CHHHHHHHhhcCC
Q 037194          131 FCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAAL--FG--------QTDTASFLFHKSE  185 (215)
Q Consensus       131 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~--~g--------~~~~v~~Ll~~~~  185 (215)
                      ||+|+..++.+++++|++.|++ ++..+..|.|||++|+.  .+        ..++++.|+++++
T Consensus       414 Lh~Aa~~~n~eivelLLs~GAD-IN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p  477 (631)
T PHA02792        414 LYYCIESHSVSLVEWLIDNGAD-INITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLP  477 (631)
T ss_pred             HHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999 79999999999999976  22        2567899998886

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.64  E-value=2.3e-15  Score=123.62  Aligned_cols=134  Identities=19%  Similarity=0.196  Sum_probs=116.6

Q ss_pred             cccccccCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhc---------------------CCCCccHHHHHHhcCCH
Q 037194           47 GKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAI---------------------TEGHQTVLHVATGAKQT  105 (215)
Q Consensus        47 ~~~~~~~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~---------------------~~~g~~~L~~a~~~g~~  105 (215)
                      +......--|.|+||.|+.+.+.++|+.|++.| ++......                     -..|..||.+||-.++.
T Consensus       175 d~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~g-ADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~  253 (782)
T KOG3676|consen  175 DIYTSEEYYGQSALHIAIVNRDAELVRLLLAAG-ADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQP  253 (782)
T ss_pred             hhhhhHhhcCcchHHHHHHhccHHHHHHHHHcC-CchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCH
Confidence            444444446789999999999999999999998 44332111                     12478899999999999


Q ss_pred             HHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCC-CCCCCCCCCCCHHHHHHHhCCHHHHHHHhhc
Q 037194          106 SFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPS-LLGIRGSKNMPPLYFAALFGQTDTASFLFHK  183 (215)
Q Consensus       106 ~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~-~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~  183 (215)
                      +++++|++.  ++|++.+|..|+|.||..+..-..++-+++++.|+. +..+.|..|.|||.+|++-|..++.++++++
T Consensus       254 eivrlLl~~--gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  254 EIVRLLLAH--GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             HHHHHHHhc--CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            999999998  999999999999999999999999999999999987 2478899999999999999999999999999

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.62  E-value=6.4e-15  Score=108.70  Aligned_cols=124  Identities=30%  Similarity=0.327  Sum_probs=103.3

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCC-----HHHHHHHHHccCCC---CcccccCC
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQ-----TSFVQQLLTFMDPE---DLMLQDEN  126 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~-----~~~v~~Ll~~~~~~---~~~~~~~~  126 (215)
                      .+.++++.++..++.+.++.++..+ ...  ...+..|.||||+|+..++     .++++.|++.  +.   ..+.+|..
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~--~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~--g~~~~~~~~~~~~  146 (235)
T COG0666          72 DGRLPLHSAASKGDDKIVKLLLASG-ADV--NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEA--GADLDVNNLRDED  146 (235)
T ss_pred             cccCHHHHHHHcCcHHHHHHHHHcC-CCc--ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHc--CCCCCCccccCCC
Confidence            3557888888888888888888887 444  3578888899999999988     8889999888  66   55666888


Q ss_pred             CchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcC
Q 037194          127 GNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKS  184 (215)
Q Consensus       127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~  184 (215)
                      |+||||+|+..|+.+++++|++.+++ ++..+..|.|+++.|+..++.++++.++..+
T Consensus       147 g~tpl~~A~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         147 GNTPLHWAALNGDADIVELLLEAGAD-PNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCchhHHHHHcCchHHHHHHHhcCCC-CcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999999888899999988888 6788888899999999999988888888864

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.61  E-value=1.5e-14  Score=106.67  Aligned_cols=125  Identities=21%  Similarity=0.297  Sum_probs=114.1

Q ss_pred             cCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCc-----HHHHHHHHHhCC--CCCCCCCCC
Q 037194           88 ITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGA-----VDIANLMLKKNP--SLLGIRGSK  160 (215)
Q Consensus        88 ~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~-----~~~~~~Ll~~~~--~~~~~~~~~  160 (215)
                      .+..+.+++|.++..+...++++++..  +.+++.++..|.||+|+|+..++     .+++++|++.|+  +.....|..
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~  146 (235)
T COG0666          69 RDLDGRLPLHSAASKGDDKIVKLLLAS--GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED  146 (235)
T ss_pred             CCccccCHHHHHHHcCcHHHHHHHHHc--CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence            456688999999999999999999999  89999999999999999999999     999999999999  446777999


Q ss_pred             CCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          161 NMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       161 g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      |.||||+|+..|+.++++.|++.|+ ....+..+.++++.+...+..++...+++
T Consensus       147 g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~  201 (235)
T COG0666         147 GNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLD  201 (235)
T ss_pred             CCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHh
Confidence            9999999999999999999999999 66667888889998889999888888765

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.60  E-value=3.6e-15  Score=84.96  Aligned_cols=54  Identities=35%  Similarity=0.514  Sum_probs=27.6

Q ss_pred             CccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHH
Q 037194           92 HQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLML  147 (215)
Q Consensus        92 g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll  147 (215)
                      |+||||+|+..|+.+++++|++.  +.+++.+|..|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~--~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEH--GADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHT--TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            44555555555555555555555  5555555555555555555555555555553

...

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.59  E-value=5.5e-15  Score=84.21  Aligned_cols=54  Identities=30%  Similarity=0.546  Sum_probs=46.0

Q ss_pred             CchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHh
Q 037194          127 GNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLF  181 (215)
Q Consensus       127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll  181 (215)
                      |+||||+|+..|+.+++++|++.|.+ ++..|.+|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~d-in~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGAD-INAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSG-TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            68999999999999999999999999 7899999999999999999999999986

...

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.57  E-value=2e-14  Score=121.34  Aligned_cols=86  Identities=21%  Similarity=0.210  Sum_probs=64.8

Q ss_pred             HHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCH
Q 037194           95 VLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQT  174 (215)
Q Consensus        95 ~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~  174 (215)
                      .|+.|+..|+.++++.|++.  |+++|.+|..|+||||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~--Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-vn~~d~~G~TpLh~A~~~g~~  161 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTG--GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGAD-PTLLDKDGKTPLELAEENGFR  161 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcH
Confidence            46677777777777777776  777777777777777777777777777777777777 577777777777777777777


Q ss_pred             HHHHHHhhc
Q 037194          175 DTASFLFHK  183 (215)
Q Consensus       175 ~~v~~Ll~~  183 (215)
                      +++++|+.+
T Consensus       162 ~iv~~Ll~~  170 (664)
T PTZ00322        162 EVVQLLSRH  170 (664)
T ss_pred             HHHHHHHhC
Confidence            777777776

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.55  E-value=3e-14  Score=112.01  Aligned_cols=120  Identities=20%  Similarity=0.228  Sum_probs=84.3

Q ss_pred             HHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcC
Q 037194           59 LLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVG  138 (215)
Q Consensus        59 ~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~  138 (215)
                      .|.-|+..|-+++|+.++.+-   ......+..|.|+||-|+-.||.+||++|+++  |+++|..|.+||||||.|+.-+
T Consensus       553 LLLDaaLeGEldlVq~~i~ev---~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~--ganVNa~DSdGWTPLHCAASCN  627 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEV---TDPSQPNDEGITALHNAICAGHYEIVKFLIEF--GANVNAADSDGWTPLHCAASCN  627 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhh---cCCCCCCccchhHHhhhhhcchhHHHHHHHhc--CCcccCccCCCCchhhhhhhcC
Confidence            356677778888888777764   11223566788888888888888888888887  7888888888888888888778


Q ss_pred             cHHHHHHHHHhCCCCCCCCCCCCCCHHHHHH--HhCCHHHHHHHhhc
Q 037194          139 AVDIANLMLKKNPSLLGIRGSKNMPPLYFAA--LFGQTDTASFLFHK  183 (215)
Q Consensus       139 ~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~--~~g~~~~v~~Ll~~  183 (215)
                      +..+++.|++.|+...-..-.++.|+..-+-  ..|+.+|.+||...
T Consensus       628 nv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  628 NVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             chHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence            8888888888777632233345667665543  45667777777643

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.54  E-value=6.9e-15  Score=84.27  Aligned_cols=50  Identities=28%  Similarity=0.490  Sum_probs=25.8

Q ss_pred             CCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 037194          118 EDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFA  168 (215)
Q Consensus       118 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a  168 (215)
                      .+++.+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|
T Consensus         7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d-~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGAD-PNAKDKDGQTPLHYA   56 (56)
T ss_dssp             --TT---TTS--HHHHHHHHT-HHHHHHHHHCT---TT---TTS--HHHH-
T ss_pred             CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC-CCCCcCCCCCHHHhC
Confidence            66777777777777777777777777777777777 677777777777765

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.54  E-value=2.4e-14  Score=112.54  Aligned_cols=115  Identities=17%  Similarity=0.147  Sum_probs=98.6

Q ss_pred             HHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCH
Q 037194           95 VLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQT  174 (215)
Q Consensus        95 ~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~  174 (215)
                      .|.-|+.-|-+++|+.++..  -.|+...+..|-|+||-|+..|+.+||+||++.|++ ++..|.+||||||+|+.-++.
T Consensus       553 LLLDaaLeGEldlVq~~i~e--v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~gan-VNa~DSdGWTPLHCAASCNnv  629 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYE--VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGAN-VNAADSDGWTPLHCAASCNNV  629 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHh--hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCc-ccCccCCCCchhhhhhhcCch
Confidence            35678889999999999887  688888899999999999999999999999999999 899999999999999999999


Q ss_pred             HHHHHHhhcCC--CCCCCCCCchHHHHHHh--cCchhHHHHh
Q 037194          175 DTASFLFHKSE--KELPTEDRKVIFITSVD--TGLYGKYQDI  212 (215)
Q Consensus       175 ~~v~~Ll~~~~--~~~~~~~~~~~~~~a~~--~~~~~~~~~l  212 (215)
                      .+++.|++.|+  ....-.++.|+..-|-.  .|+..+.++|
T Consensus       630 ~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL  671 (752)
T KOG0515|consen  630 PMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYL  671 (752)
T ss_pred             HHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHH
Confidence            99999999998  33344567777776643  4555666655

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.54  E-value=1.6e-13  Score=100.59  Aligned_cols=120  Identities=20%  Similarity=0.224  Sum_probs=107.0

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccc-cCCCchhhHHH
Q 037194           56 ERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQ-DENGNTAFCFA  134 (215)
Q Consensus        56 g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~-~~~g~t~l~~a  134 (215)
                      ...+|..++-.|+.+....||..- ...  ...|..|-++|..|+.+|+.++|+.|++.  |+|+|.. +..+.||||.|
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~v-r~v--n~~D~sGMs~LahAaykGnl~~v~lll~~--gaDvN~~qhg~~YTpLmFA   86 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTV-RQV--NQRDPSGMSVLAHAAYKGNLTLVELLLEL--GADVNDKQHGTLYTPLMFA   86 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHh-hhh--hccCCCcccHHHHHHhcCcHHHHHHHHHh--CCCcCcccccccccHHHHH
Confidence            347899999999999999999864 222  36899999999999999999999999999  9999875 56689999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLF  181 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll  181 (215)
                      +..|+.+++++|++.|+. +...|.-|+|+-..|+--|+-++|..+=
T Consensus        87 ALSGn~dvcrllldaGa~-~~~vNsvgrTAaqmAAFVG~H~CV~iIN  132 (396)
T KOG1710|consen   87 ALSGNQDVCRLLLDAGAR-MYLVNSVGRTAAQMAAFVGHHECVAIIN  132 (396)
T ss_pred             HHcCCchHHHHHHhccCc-cccccchhhhHHHHHHHhcchHHHHHHh
Confidence            999999999999999999 7999999999999999999988886553

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.53  E-value=6.1e-14  Score=118.48  Aligned_cols=106  Identities=21%  Similarity=0.252  Sum_probs=93.6

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      ..|+.|+..|+.+.++.|++.+ ...  ...+..|+||||+|+..|+.+++++|++.  |++++.+|..|.||||+|+..
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~G-adi--n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~--Gadvn~~d~~G~TpLh~A~~~  158 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGG-ADP--NCRDYDGRTPLHIACANGHVQVVRVLLEF--GADPTLLDKDGKTPLELAEEN  158 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCC-CCC--CCcCCCCCcHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHC
Confidence            3588999999999999999998 444  34688999999999999999999999999  999999999999999999999


Q ss_pred             CcHHHHHHHHHh-------CCCCCCCCCCCCCCHHHHHH
Q 037194          138 GAVDIANLMLKK-------NPSLLGIRGSKNMPPLYFAA  169 (215)
Q Consensus       138 ~~~~~~~~Ll~~-------~~~~~~~~~~~g~t~l~~a~  169 (215)
                      ++.+++++|+..       +++ ....+..|.+|+..+.
T Consensus       159 g~~~iv~~Ll~~~~~~~~~ga~-~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        159 GFREVVQLLSRHSQCHFELGAN-AKPDSFTGKPPSLEDS  196 (664)
T ss_pred             CcHHHHHHHHhCCCcccccCCC-CCccccCCCCccchhh
Confidence            999999999998       776 5677777777766554

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.48  E-value=4.8e-14  Score=80.73  Aligned_cols=56  Identities=27%  Similarity=0.289  Sum_probs=32.2

Q ss_pred             HHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           75 LFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        75 ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      ||+.+ +.... ..|..|.||||+|+.+|+.+++++|+..  +++++.+|..|+||+|+|
T Consensus         1 LL~~~-~~~~n-~~d~~G~T~LH~A~~~g~~~~v~~Ll~~--g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHG-PADVN-AQDKYGNTPLHWAARYGHSEVVRLLLQN--GADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             ------T--TT----TTS--HHHHHHHHT-HHHHHHHHHC--T--TT---TTS--HHHH-
T ss_pred             CCccC-cCCCc-CcCCCCCcHHHHHHHcCcHHHHHHHHHC--cCCCCCCcCCCCCHHHhC
Confidence            34444 33333 5789999999999999999999999987  999999999999999987

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.44  E-value=1.8e-12  Score=95.16  Aligned_cols=119  Identities=20%  Similarity=0.203  Sum_probs=100.1

Q ss_pred             CccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHh
Q 037194           92 HQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALF  171 (215)
Q Consensus        92 g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~  171 (215)
                      -..+|.-++-+++.+-...|+..  -.++|.+|..|.++|..|+..|+.+++++|++.|++.....+..+.||||.|+..
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~--vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS   89 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLST--VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS   89 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHH--hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc
Confidence            45689999999999999999887  5678999999999999999999999999999999995555667789999999999


Q ss_pred             CCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          172 GQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       172 g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+.++...|++.|+ ..+.+.-|.|.-..|+.-|+.+++..|
T Consensus        90 Gn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   90 GNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             CCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence            99999999999999 555555555666655566677776554

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.43  E-value=2.1e-13  Score=115.61  Aligned_cols=152  Identities=20%  Similarity=0.204  Sum_probs=121.4

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccc-cCCCchhhHHHH
Q 037194           57 RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQ-DENGNTAFCFAA  135 (215)
Q Consensus        57 ~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~-~~~g~t~l~~a~  135 (215)
                      .++|-.|+..|+.|.+..|+.+| .++  ..+|+.|.+||.+|+-.||..+|+.|+..  .++++.+ |+.+.|+|.+||
T Consensus       758 ~t~LT~acaggh~e~vellv~rg-ani--ehrdkkgf~plImaatagh~tvV~~llk~--ha~veaQsdrtkdt~lSlac  832 (2131)
T KOG4369|consen  758 KTNLTSACAGGHREEVELLVVRG-ANI--EHRDKKGFVPLIMAATAGHITVVQDLLKA--HADVEAQSDRTKDTMLSLAC  832 (2131)
T ss_pred             cccccccccCccHHHHHHHHHhc-ccc--cccccccchhhhhhcccCchHHHHHHHhh--hhhhhhhcccccCceEEEec
Confidence            57799999999999999999988 554  35788999999999999999999999888  7777765 667888999999


Q ss_pred             hcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC---CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          136 AVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE---KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       136 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      ..|..+++++|+..|+. -..++....|||.+|..-|+.++|..|+..|+   ...-.+-|-.+|.++.+.|+-.....|
T Consensus       833 sggr~~vvelLl~~gan-kehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~l  911 (2131)
T KOG4369|consen  833 SGGRTRVVELLLNAGAN-KEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSL  911 (2131)
T ss_pred             CCCcchHHHHHHHhhcc-ccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHH
Confidence            99999999999988887 57777777888888888888888888888886   222334455667777777777777766


Q ss_pred             hc
Q 037194          213 FK  214 (215)
Q Consensus       213 l~  214 (215)
                      |+
T Consensus       912 l~  913 (2131)
T KOG4369|consen  912 LQ  913 (2131)
T ss_pred             hc
Confidence            64

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.37  E-value=1e-12  Score=111.54  Aligned_cols=157  Identities=17%  Similarity=0.196  Sum_probs=123.0

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      .+.|.++|..|+--|+...|+.|+... .. +....|..+.|+|.+||..|+.+.|++||..  +++-..++....|||.
T Consensus       787 dkkgf~plImaatagh~tvV~~llk~h-a~-veaQsdrtkdt~lSlacsggr~~vvelLl~~--gankehrnvsDytPls  862 (2131)
T KOG4369|consen  787 DKKGFVPLIMAATAGHITVVQDLLKAH-AD-VEAQSDRTKDTMLSLACSGGRTRVVELLLNA--GANKEHRNVSDYTPLS  862 (2131)
T ss_pred             ccccchhhhhhcccCchHHHHHHHhhh-hh-hhhhcccccCceEEEecCCCcchHHHHHHHh--hccccccchhhcCchh
Confidence            357789999999999999999999887 43 3446788899999999999999999999998  7777777777889999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCC--CCCCCCHHHHHHHhCCHHHHHHHhhcCC--CCCCCCCCchHHHHHHhcCchhH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIR--GSKNMPPLYFAALFGQTDTASFLFHKSE--KELPTEDRKVIFITSVDTGLYGK  208 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~--~~~g~t~l~~a~~~g~~~~v~~Ll~~~~--~~~~~~~~~~~~~~a~~~~~~~~  208 (215)
                      +|...|..+++++|+..|+. ++.+  ...|..||++|...|+...++.|++.|.  +.-...+.++.|-.++.-|..++
T Consensus       863 la~Sggy~~iI~~llS~Gse-InSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~ev  941 (2131)
T KOG4369|consen  863 LARSGGYTKIIHALLSSGSE-INSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEV  941 (2131)
T ss_pred             hhcCcchHHHHHHHhhcccc-cccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchH
Confidence            99999999999999998876 4443  3467888888888888888888888876  22233445555555556666677


Q ss_pred             HHHhhc
Q 037194          209 YQDIFK  214 (215)
Q Consensus       209 ~~~ll~  214 (215)
                      +..||.
T Consensus       942 v~lLLa  947 (2131)
T KOG4369|consen  942 VFLLLA  947 (2131)
T ss_pred             HHHHHH
Confidence            766663

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=99.14  E-value=1.8e-10  Score=92.03  Aligned_cols=123  Identities=24%  Similarity=0.281  Sum_probs=105.6

Q ss_pred             HHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcC
Q 037194           59 LLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVG  138 (215)
Q Consensus        59 ~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~  138 (215)
                      -+..|+..+++-.++..-..| ...  ..++.+..+.||+|+..|+-++|+|+++.++...++..|..|.|+||-|+..+
T Consensus       869 eil~av~~~D~~klqE~h~~g-g~l--l~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~  945 (1004)
T KOG0782|consen  869 EILRAVLSSDLMKLQETHLNG-GSL--LIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQR  945 (1004)
T ss_pred             HHHHHHHhccHHHHHHHHhcC-Cce--EeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhc
Confidence            367788888876666666666 333  25688889999999999999999999999766678888999999999999999


Q ss_pred             cHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          139 AVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       139 ~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      +..++++|++.|+. ....|..|.||-..|-+.|+.+++.||-.+-.
T Consensus       946 ~r~vc~~lvdagas-l~ktd~kg~tp~eraqqa~d~dlaayle~rq~  991 (1004)
T KOG0782|consen  946 NRAVCQLLVDAGAS-LRKTDSKGKTPQERAQQAGDPDLAAYLESRQN  991 (1004)
T ss_pred             chHHHHHHHhcchh-heecccCCCChHHHHHhcCCchHHHHHhhhhc
Confidence            99999999999999 68889999999999999999999999976643

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=99.13  E-value=8e-11  Score=97.58  Aligned_cols=95  Identities=33%  Similarity=0.467  Sum_probs=83.4

Q ss_pred             HHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCC-CchhhHHHHhcCcHHHHHHHHHhC
Q 037194           72 IEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDEN-GNTAFCFAAAVGAVDIANLMLKKN  150 (215)
Q Consensus        72 ~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~~  150 (215)
                      ++-++++. .......+|..|+++||+++.-+..++++||+.+  |.++..+|+. |+||||-|...|+++|+-.|+.+|
T Consensus        33 lk~F~~k~-c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqh--Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g  109 (1267)
T KOG0783|consen   33 LKGFSEKS-CQNLANIKDRYGRTALHIAVSENKNSFLRWLLQH--GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG  109 (1267)
T ss_pred             HHHHHHHh-hhhhhhHHHhhccceeeeeeccchhHHHHHHHhc--CceeeeccccccchHhhHhhhhchHHHHHHHHhcC
Confidence            55555553 2223447899999999999999999999999999  9999999975 999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCHHHHHHH
Q 037194          151 PSLLGIRGSKNMPPLYFAAL  170 (215)
Q Consensus       151 ~~~~~~~~~~g~t~l~~a~~  170 (215)
                      +. ..+.|..|.+||...++
T Consensus       110 ~S-L~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  110 RS-LRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             Cc-eEEecccCCCHHHHHhh
Confidence            99 69999999999988876

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=99.07  E-value=1.1e-09  Score=86.13  Aligned_cols=93  Identities=23%  Similarity=0.266  Sum_probs=81.0

Q ss_pred             hcCCCCcc------HHHHHHhcCCHHHHHHHHHccCCCCcccccC-CCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCC
Q 037194           87 AITEGHQT------VLHVATGAKQTSFVQQLLTFMDPEDLMLQDE-NGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGS  159 (215)
Q Consensus        87 ~~~~~g~~------~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~  159 (215)
                      .+|.+|.+      -||-++..|+.+..-.|+..  |+++|+.+. .|.||||+|++.|+..-+++|+-+|++ +...|.
T Consensus       122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~l--GA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD-~~a~d~  198 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSL--GAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD-PGAQDS  198 (669)
T ss_pred             CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHc--ccccCCCCcccCCchhHHHHhccchhhhhHHhhccCC-CCCCCC
Confidence            34555554      38999999999988888888  999998875 589999999999999999999999999 899999


Q ss_pred             CCCCHHHHHHHhCCHHHHHHHhh
Q 037194          160 KNMPPLYFAALFGQTDTASFLFH  182 (215)
Q Consensus       160 ~g~t~l~~a~~~g~~~~v~~Ll~  182 (215)
                      .|.||+.+|-..||-++.+.|++
T Consensus       199 ~GmtP~~~AR~~gH~~laeRl~e  221 (669)
T KOG0818|consen  199 SGMTPVDYARQGGHHELAERLVE  221 (669)
T ss_pred             CCCcHHHHHHhcCchHHHHHHHH
Confidence            99999999999999887765554

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=99.07  E-value=2.3e-10  Score=89.36  Aligned_cols=92  Identities=20%  Similarity=0.158  Sum_probs=83.4

Q ss_pred             CCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 037194           91 GHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAAL  170 (215)
Q Consensus        91 ~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~  170 (215)
                      .+...+++|++.|+...++.+.-.  +.|++.+|++.+|+||+|+..|+.+++++|++.....++..|+.|+|||.-|..
T Consensus       505 ~~~i~~~~aa~~GD~~alrRf~l~--g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  505 DTVINVMYAAKNGDLSALRRFALQ--GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             cchhhhhhhhhcCCHHHHHHHHHh--cccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            355679999999999999888877  899999999999999999999999999999998766589999999999999999


Q ss_pred             hCCHHHHHHHhhcC
Q 037194          171 FGQTDTASFLFHKS  184 (215)
Q Consensus       171 ~g~~~~v~~Ll~~~  184 (215)
                      .+|.+++++|-+.-
T Consensus       583 F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  583 FKHKEVVKLLEEAQ  596 (622)
T ss_pred             cCcHHHHHHHHHHh
Confidence            99999999997754

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.99  E-value=6.2e-10  Score=87.04  Aligned_cols=92  Identities=18%  Similarity=0.192  Sum_probs=82.1

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .+...+.+|+..|++..++.+.-.+ ...  ..+|.+.+|+||+|+.-|+.+++++|++.- +.+++.+|++|+|||.-|
T Consensus       505 ~~~i~~~~aa~~GD~~alrRf~l~g-~D~--~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~-kv~~~~kDRw~rtPlDdA  580 (622)
T KOG0506|consen  505 DTVINVMYAAKNGDLSALRRFALQG-MDL--ETKDYDDRTALHVAAAEGHVEVVKFLLNAC-KVDPDPKDRWGRTPLDDA  580 (622)
T ss_pred             cchhhhhhhhhcCCHHHHHHHHHhc-ccc--cccccccchhheeecccCceeHHHHHHHHH-cCCCChhhccCCCcchHh
Confidence            3456799999999999999999887 332  468999999999999999999999999974 789999999999999999


Q ss_pred             HhcCcHHHHHHHHHhC
Q 037194          135 AAVGAVDIANLMLKKN  150 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~  150 (215)
                      ...++.+++++|.+.-
T Consensus       581 ~~F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  581 KHFKHKEVVKLLEEAQ  596 (622)
T ss_pred             HhcCcHHHHHHHHHHh
Confidence            9999999999998853

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.90  E-value=5.4e-09  Score=82.92  Aligned_cols=64  Identities=20%  Similarity=0.318  Sum_probs=31.1

Q ss_pred             CCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhh
Q 037194          118 EDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFH  182 (215)
Q Consensus       118 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~  182 (215)
                      ..++..|..|.||||+|+..|+...++.|+..|++ +..+|..||+|||.|+..|+.+++..++.
T Consensus        46 ~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~~kN~~gWs~L~EAv~~g~~q~i~~vlr  109 (560)
T KOG0522|consen   46 LVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD-VSIKNNEGWSPLHEAVSTGNEQIITEVLR  109 (560)
T ss_pred             ceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC-ccccccccccHHHHHHHcCCHHHHHHHHH
Confidence            33444444455555555555555555555555544 44444555555555555555444444333

>PF13606 Ank_3: Ankyrin repeat

Probab=98.88  E-value=3.4e-09  Score=52.06  Aligned_cols=28  Identities=29%  Similarity=0.344  Sum_probs=15.4

Q ss_pred             CccHHHHHHhcCCHHHHHHHHHccCCCCcc
Q 037194           92 HQTVLHVATGAKQTSFVQQLLTFMDPEDLM  121 (215)
Q Consensus        92 g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~  121 (215)
                      |+||||+||+.|+.+++++|++.  |+++|
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~--gadvn   29 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEH--GADVN   29 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHc--CCCCC
Confidence            45555555555555555555555  45443

>PF13606 Ank_3: Ankyrin repeat

Probab=98.83  E-value=5.7e-09  Score=51.25  Aligned_cols=26  Identities=31%  Similarity=0.595  Sum_probs=16.2

Q ss_pred             CchhhHHHHhcCcHHHHHHHHHhCCC
Q 037194          127 GNTAFCFAAAVGAVDIANLMLKKNPS  152 (215)
Q Consensus       127 g~t~l~~a~~~~~~~~~~~Ll~~~~~  152 (215)
                      |+||||+|+..|+.+++++|++.|++
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~gad   27 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEHGAD   27 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence            56666666666666666666666555

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.83  E-value=3.8e-09  Score=87.99  Aligned_cols=84  Identities=17%  Similarity=0.195  Sum_probs=75.9

Q ss_pred             CCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCch
Q 037194          118 EDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGS-KNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKV  195 (215)
Q Consensus       118 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~  195 (215)
                      ...|++|..|+|+||+++..+...++++|+.+|.+ +..+|. .|+||||.|+..|++|++-.|+.+|. -.+.+++|..
T Consensus        43 n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGid-v~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkegls  121 (1267)
T KOG0783|consen   43 NLANIKDRYGRTALHIAVSENKNSFLRWLLQHGID-VFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLS  121 (1267)
T ss_pred             hhhhHHHhhccceeeeeeccchhHHHHHHHhcCce-eeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCC
Confidence            34788999999999999999999999999999999 677775 69999999999999999999999999 7778888888


Q ss_pred             HHHHHHh
Q 037194          196 IFITSVD  202 (215)
Q Consensus       196 ~~~~a~~  202 (215)
                      |+.....
T Consensus       122 plq~~~r  128 (1267)
T KOG0783|consen  122 PLQFLSR  128 (1267)
T ss_pred             HHHHHhh
Confidence            8887765

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.81  E-value=3.3e-08  Score=79.38  Aligned_cols=100  Identities=22%  Similarity=0.184  Sum_probs=89.3

Q ss_pred             cccccccCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCC
Q 037194           47 GKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDEN  126 (215)
Q Consensus        47 ~~~~~~~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~  126 (215)
                      +....+..+.++.||+|+.-|+-++|+++|+++ |..+....+..|.|+||.|+-.++..++++|++.  |+.+...|..
T Consensus       890 g~ll~~~~~~~sllh~a~~tg~~eivkyildh~-p~elld~~de~get~lhkaa~~~~r~vc~~lvda--gasl~ktd~k  966 (1004)
T KOG0782|consen  890 GSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHG-PSELLDMADETGETALHKAACQRNRAVCQLLVDA--GASLRKTDSK  966 (1004)
T ss_pred             CceEeeCcchhhHHHHHHhcCChHHHHHHHhcC-CHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhc--chhheecccC
Confidence            455556666789999999999999999999999 5555557789999999999999999999999999  9999999999


Q ss_pred             CchhhHHHHhcCcHHHHHHHHHh
Q 037194          127 GNTAFCFAAAVGAVDIANLMLKK  149 (215)
Q Consensus       127 g~t~l~~a~~~~~~~~~~~Ll~~  149 (215)
                      |.||-.-|-..|..+.+.+|-..
T Consensus       967 g~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  967 GKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             CCChHHHHHhcCCchHHHHHhhh
Confidence            99999999999999999998764

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.81  E-value=1.1e-08  Score=51.66  Aligned_cols=31  Identities=29%  Similarity=0.345  Sum_probs=18.4

Q ss_pred             CccHHHHHHhcCCHHHHHHHHHccCCCCccccc
Q 037194           92 HQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQD  124 (215)
Q Consensus        92 g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~  124 (215)
                      |.||||+|+..|+.+++++|++.  |++++.+|
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~--ga~~~~~d   32 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKH--GADINARD   32 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHT--TSCTTCBC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHC--cCCCCCCC
Confidence            55666666666666666666665  55555544

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.80  E-value=3.4e-08  Score=77.94  Aligned_cols=86  Identities=23%  Similarity=0.210  Sum_probs=75.8

Q ss_pred             HHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcC
Q 037194           59 LLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVG  138 (215)
Q Consensus        59 ~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~  138 (215)
                      -||..++.|+.+..-.||..| +...- .....|.||||.|+..|...-+++|+-.  |+|++.+|..|.||+.+|-..|
T Consensus       136 QLhasvRt~nlet~LRll~lG-A~~N~-~hpekg~TpLHvAAk~Gq~~Q~ElL~vY--GAD~~a~d~~GmtP~~~AR~~g  211 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLG-AQANF-FHPEKGNTPLHVAAKAGQILQAELLAVY--GADPGAQDSSGMTPVDYARQGG  211 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcc-cccCC-CCcccCCchhHHHHhccchhhhhHHhhc--cCCCCCCCCCCCcHHHHHHhcC
Confidence            499999999999999999998 54432 4567799999999999999999999888  9999999999999999999999


Q ss_pred             cHHHHHHHHH
Q 037194          139 AVDIANLMLK  148 (215)
Q Consensus       139 ~~~~~~~Ll~  148 (215)
                      +-++.+-|++
T Consensus       212 H~~laeRl~e  221 (669)
T KOG0818|consen  212 HHELAERLVE  221 (669)
T ss_pred             chHHHHHHHH
Confidence            9887776665

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.79  E-value=2.5e-08  Score=80.04  Aligned_cols=90  Identities=21%  Similarity=0.286  Sum_probs=50.4

Q ss_pred             HHHHHHcCCHHHHHHHHhhcchhh-hhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcC
Q 037194           60 LYKAALKGEMKEIEGLFEKDYRSI-ICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVG  138 (215)
Q Consensus        60 L~~a~~~g~~~~~~~ll~~~~~~~-~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~  138 (215)
                      |.-|+...++..+..||.+|.... ...+.+.+|+|+||+||..|+..+.++|+=.  +.|+..+|..|+|+|.||-..|
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWy--g~dv~~rda~g~t~l~yar~a~  705 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWY--GVDVMARDAHGRTALFYARQAG  705 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHh--CccceecccCCchhhhhHhhcc
Confidence            555555556656656665542111 1223344556666666666666666666554  5666666666666666666666


Q ss_pred             cHHHHHHHHHhCC
Q 037194          139 AVDIANLMLKKNP  151 (215)
Q Consensus       139 ~~~~~~~Ll~~~~  151 (215)
                      .-+|+.+|+..|.
T Consensus       706 sqec~d~llq~gc  718 (749)
T KOG0705|consen  706 SQECIDVLLQYGC  718 (749)
T ss_pred             cHHHHHHHHHcCC
Confidence            6666666666554

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.77  E-value=2.5e-08  Score=79.22  Aligned_cols=88  Identities=18%  Similarity=0.201  Sum_probs=74.4

Q ss_pred             HHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcC
Q 037194           59 LLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVG  138 (215)
Q Consensus        59 ~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~  138 (215)
                      ++|+++...+.+.+...+... .......+|..|+||||+|+..|+...++.|+..  ++++..++..||+|||-|+..|
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~-~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a--~Adv~~kN~~gWs~L~EAv~~g   99 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAK-VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSA--GADVSIKNNEGWSPLHEAVSTG   99 (560)
T ss_pred             ccchhhhccchhhHHHHHhhh-hhceeccccCCCCccHHHHHHhcCHHHHHHHHhc--CCCccccccccccHHHHHHHcC
Confidence            489999998888877766554 3333346789999999999999999999999999  9999999999999999999999


Q ss_pred             cHHHHHHHHHh
Q 037194          139 AVDIANLMLKK  149 (215)
Q Consensus       139 ~~~~~~~Ll~~  149 (215)
                      +..++..++.+
T Consensus       100 ~~q~i~~vlr~  110 (560)
T KOG0522|consen  100 NEQIITEVLRH  110 (560)
T ss_pred             CHHHHHHHHHH
Confidence            98877666654

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.75  E-value=1.9e-08  Score=50.74  Aligned_cols=32  Identities=38%  Similarity=0.630  Sum_probs=20.5

Q ss_pred             CCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCC
Q 037194          126 NGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRG  158 (215)
Q Consensus       126 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~  158 (215)
                      +|+||||+|+..++.+++++|++.|++ ++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGAD-INARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSC-TTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCC-CCCCC
Confidence            366666666666666666666666666 45443

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.72  E-value=7.3e-08  Score=80.70  Aligned_cols=117  Identities=18%  Similarity=0.208  Sum_probs=96.9

Q ss_pred             HHHHHHHcCCHHHHHHHHhhcchh--hhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHh
Q 037194           59 LLYKAALKGEMKEIEGLFEKDYRS--IICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAA  136 (215)
Q Consensus        59 ~L~~a~~~g~~~~~~~ll~~~~~~--~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~  136 (215)
                      .+..|+..|+...|+..++.. ..  ...++.|.-|+++|++|+.+.+.+++++|++.  +...       ..+|.+|+.
T Consensus        28 ~fL~a~E~gd~~~V~k~l~~~-~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~--~~~~-------gdALL~aI~   97 (822)
T KOG3609|consen   28 GFLLAHENGDVPLVAKALEYK-AVSKLNINCRDPLGRLALHIAIDNENLELQELLLDT--SSEE-------GDALLLAIA   97 (822)
T ss_pred             HHHHHHHcCChHHHHHHHHhc-cccccchhccChHhhhceecccccccHHHHHHHhcC--cccc-------chHHHHHHH
Confidence            478999999999999999876 32  33457899999999999999999999999987  4433       238999999


Q ss_pred             cCcHHHHHHHHHhCCCC---------CCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          137 VGAVDIANLMLKKNPSL---------LGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       137 ~~~~~~~~~Ll~~~~~~---------~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      .|...+|+.++......         ....-..+.||+.+|+..+++||++.|+++|+
T Consensus        98 ~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~  155 (822)
T KOG3609|consen   98 VGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH  155 (822)
T ss_pred             HHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence            99999999999853220         12334467899999999999999999999998

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.66  E-value=1e-07  Score=76.64  Aligned_cols=89  Identities=22%  Similarity=0.267  Sum_probs=75.7

Q ss_pred             HHHHHhcCCHHHHHHHHHccCCCCccc--ccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCC
Q 037194           96 LHVATGAKQTSFVQQLLTFMDPEDLML--QDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQ  173 (215)
Q Consensus        96 L~~a~~~g~~~~v~~Ll~~~~~~~~~~--~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~  173 (215)
                      |.-|+...+...+-.||.++....+|.  -+.+|.|+||+|+..|+..+.++|+=+|++ +...|..|.|+|.||-+.|.
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD-VMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc-ceecccCCchhhhhHhhccc
Confidence            555666677777888888743333433  345679999999999999999999999999 89999999999999999999


Q ss_pred             HHHHHHHhhcCC
Q 037194          174 TDTASFLFHKSE  185 (215)
Q Consensus       174 ~~~v~~Ll~~~~  185 (215)
                      .+|+..|+++|.
T Consensus       707 qec~d~llq~gc  718 (749)
T KOG0705|consen  707 QECIDVLLQYGC  718 (749)
T ss_pred             HHHHHHHHHcCC
Confidence            999999999997

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=98.46  E-value=2.1e-07  Score=79.57  Aligned_cols=124  Identities=19%  Similarity=0.122  Sum_probs=93.1

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhh-cchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEK-DYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~-~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      .|.+.+|.++..++.-++..+++. +   ......+.+|.-.+|.++.. +.++..+++.- .+..++++|..|||||||
T Consensus       573 r~~lllhL~a~~lyawLie~~~e~~~---~~~~eld~d~qgV~hfca~l-g~ewA~ll~~~-~~~ai~i~D~~G~tpL~w  647 (975)
T KOG0520|consen  573 RDMLLLHLLAELLYAWLIEKVIEWAG---SGDLELDRDGQGVIHFCAAL-GYEWAFLPISA-DGVAIDIRDRNGWTPLHW  647 (975)
T ss_pred             cchHHHHHHHHHhHHHHHHHHhcccc---cCchhhcccCCChhhHhhhc-CCceeEEEEee-cccccccccCCCCcccch
Confidence            456889999999998888888886 4   12223566777778885544 44444333322 278899999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCC-----CCCCCCCCCCHHHHHHHhCCHHHHHHHhhc
Q 037194          134 AAAVGAVDIANLMLKKNPSL-----LGIRGSKNMPPLYFAALFGQTDTASFLFHK  183 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~-----~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~  183 (215)
                      |+.+|+..++..|++.|++.     +...+-.|.|+-..|...|+..+..+|-+.
T Consensus       648 Aa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  648 AAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             HhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            99999999999999887652     223344688999999999998888887665

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=98.42  E-value=1e-06  Score=61.43  Aligned_cols=60  Identities=20%  Similarity=0.055  Sum_probs=30.1

Q ss_pred             cCCCCccHHHHHHhcCCHHHHHHHHHccCC-CCcccccCCCchhhHHHHhcCcHHHHHHHHHh
Q 037194           88 ITEGHQTVLHVATGAKQTSFVQQLLTFMDP-EDLMLQDENGNTAFCFAAAVGAVDIANLMLKK  149 (215)
Q Consensus        88 ~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~  149 (215)
                      +|..|+|+++.|+.-|..+.+.||+..  | +++...|..|.+++.+|-..|..++++.|.+.
T Consensus         8 rD~fgWTalmcaa~eg~~eavsyllgr--g~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    8 RDAFGWTALMCAAMEGSNEAVSYLLGR--GVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             hhhhcchHHHHHhhhcchhHHHHHhcc--CcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence            444455555555555555555555554  3 44444455555555555555555555555444

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.37  E-value=2e-06  Score=72.38  Aligned_cols=115  Identities=13%  Similarity=0.144  Sum_probs=92.9

Q ss_pred             ccHHHHHHhcCCHHHHHHHHHccCC--CCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 037194           93 QTVLHVATGAKQTSFVQQLLTFMDP--EDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAAL  170 (215)
Q Consensus        93 ~~~L~~a~~~g~~~~v~~Ll~~~~~--~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~  170 (215)
                      .--...|+++|+...|+..++....  .++|++|..|.++|+.|+.+.+.+++++|++.+.. .       ..+|.+|+.
T Consensus        26 e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~-~-------gdALL~aI~   97 (822)
T KOG3609|consen   26 EKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSE-E-------GDALLLAIA   97 (822)
T ss_pred             hHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccc-c-------chHHHHHHH
Confidence            3456889999999999998886433  57889999999999999999999999999987554 1       468999999


Q ss_pred             hCCHHHHHHHhhcCC-CC----------CCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          171 FGQTDTASFLFHKSE-KE----------LPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       171 ~g~~~~v~~Ll~~~~-~~----------~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      .|..++|+.++.+.. ..          ..-...-||+..|+..+++|+.+.||+|
T Consensus        98 ~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~k  153 (822)
T KOG3609|consen   98 VGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTR  153 (822)
T ss_pred             HHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHc
Confidence            999999999999865 11          0112234677777788899999999975

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.37  E-value=4.8e-07  Score=77.38  Aligned_cols=88  Identities=28%  Similarity=0.305  Sum_probs=78.1

Q ss_pred             CCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 037194           90 EGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAA  169 (215)
Q Consensus        90 ~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~  169 (215)
                      ..|.++||.|+.+|...++++|+.+  ++++|..|..|.+|+|.+...|+...+..|+..|++ .+..+.+|.+|+++|.
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~--ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~-~~a~~~~~~~~l~~a~  730 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQN--GADVNALDSKGRTPLHHATASGHTSIACLLLKRGAD-PNAFDPDGKLPLDIAM  730 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhc--CCcchhhhccCCCcchhhhhhcccchhhhhcccccc-ccccCccCcchhhHHh
Confidence            3468999999999999999999999  899999999999999999999999999999999999 7999999999999997


Q ss_pred             HhCCHHHHHHH
Q 037194          170 LFGQTDTASFL  180 (215)
Q Consensus       170 ~~g~~~~v~~L  180 (215)
                      ...+.+++-++
T Consensus       731 ~~~~~d~~~l~  741 (785)
T KOG0521|consen  731 EAANADIVLLL  741 (785)
T ss_pred             hhccccHHHHH
Confidence            76666554444

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.37  E-value=1.6e-06  Score=66.60  Aligned_cols=83  Identities=17%  Similarity=0.142  Sum_probs=64.3

Q ss_pred             HHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCH
Q 037194           95 VLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQT  174 (215)
Q Consensus        95 ~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~  174 (215)
                      -|-.||+.|+.+.|++|++.  |.++|.+|.....||.+|+.-||.+++++|+++|+. .......|.-. ||++...+ 
T Consensus        39 elceacR~GD~d~v~~LVet--gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAi-C~rdtf~G~RC-~YgaLnd~-  113 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVET--GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI-CSRDTFDGDRC-HYGALNDR-  113 (516)
T ss_pred             HHHHHhhcccHHHHHHHHHh--CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCc-ccccccCcchh-hhhhhhHH-
Confidence            47899999999999999998  999999999999999999999999999999999987 34444445443 56655443 


Q ss_pred             HHHHHHhhc
Q 037194          175 DTASFLFHK  183 (215)
Q Consensus       175 ~~v~~Ll~~  183 (215)
                       +-+.|+..
T Consensus       114 -IR~mllsy  121 (516)
T KOG0511|consen  114 -IRRMLLSY  121 (516)
T ss_pred             -HHHHHHHH
Confidence             23344443

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.13  E-value=1e-05  Score=62.42  Aligned_cols=83  Identities=18%  Similarity=0.187  Sum_probs=62.8

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      --|..|++.|+++.|++|++.| .+.  +..|.+..+||.+|+.-||.+.|++|+++  |+--..-...|..+ ||++.+
T Consensus        38 ~elceacR~GD~d~v~~LVetg-vnV--N~vD~fD~spL~lAsLcGHe~vvklLLen--GAiC~rdtf~G~RC-~YgaLn  111 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETG-VNV--NAVDRFDSSPLYLASLCGHEDVVKLLLEN--GAICSRDTFDGDRC-HYGALN  111 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhC-CCc--chhhcccccHHHHHHHcCcHHHHHHHHHc--CCcccccccCcchh-hhhhhh
Confidence            4599999999999999999988 443  35789999999999999999999999999  66544433445544 555555


Q ss_pred             CcHHHHHHHHH
Q 037194          138 GAVDIANLMLK  148 (215)
Q Consensus       138 ~~~~~~~~Ll~  148 (215)
                      .+  +-++|+.
T Consensus       112 d~--IR~mlls  120 (516)
T KOG0511|consen  112 DR--IRRMLLS  120 (516)
T ss_pred             HH--HHHHHHH
Confidence            43  3344554

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.11  E-value=4.8e-06  Score=71.44  Aligned_cols=84  Identities=19%  Similarity=0.224  Sum_probs=72.2

Q ss_pred             CCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhc
Q 037194          125 ENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDT  203 (215)
Q Consensus       125 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~  203 (215)
                      ..|.+++|.|+..+....+++|+++|++ ++..|..|.+|+|.+...|+...+..|+++|+ ....+.++..++..+...
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence            4578999999999999999999999999 89999999999999999999999999999999 666666777777766554


Q ss_pred             CchhHH
Q 037194          204 GLYGKY  209 (215)
Q Consensus       204 ~~~~~~  209 (215)
                      .+-+..
T Consensus       733 ~~~d~~  738 (785)
T KOG0521|consen  733 ANADIV  738 (785)
T ss_pred             ccccHH
Confidence            444443

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.89  E-value=2.6e-05  Score=67.23  Aligned_cols=122  Identities=16%  Similarity=0.187  Sum_probs=87.3

Q ss_pred             cCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHH-hCCCCCCCCCCCCCCHHH
Q 037194           88 ITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLK-KNPSLLGIRGSKNMPPLY  166 (215)
Q Consensus        88 ~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~g~t~l~  166 (215)
                      ....|.+.+|+++..++.-+++.+++- .+......|..|.-.+|. |..++.+++-+++. .|.. ++++|..||||||
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~-~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~a-i~i~D~~G~tpL~  646 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEW-AGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVA-IDIRDRNGWTPLH  646 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcc-cccCchhhcccCCChhhH-hhhcCCceeEEEEeecccc-cccccCCCCcccc
Confidence            345688999999999999998888883 123334456666667777 44445555444443 4555 7999999999999


Q ss_pred             HHHHhCCHHHHHHHhhcCC-CCC------CCCCCchHHHHHHhcCchhHHHHh
Q 037194          167 FAALFGQTDTASFLFHKSE-KEL------PTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       167 ~a~~~g~~~~v~~Ll~~~~-~~~------~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      +|..+|+..++.-|.+.|+ ..+      ..-+|.+.-..+...|+..++.+|
T Consensus       647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~l  699 (975)
T KOG0520|consen  647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYL  699 (975)
T ss_pred             hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHH
Confidence            9999999999999998887 222      222355566666677777777665

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.88  E-value=4e-05  Score=53.69  Aligned_cols=58  Identities=17%  Similarity=0.209  Sum_probs=31.4

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHc
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTF  114 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~  114 (215)
                      -|||+++.|+..|..+.+.+|+.++ ...+- ..+..+..++.+|-..|..+++..|.+.
T Consensus        11 fgWTalmcaa~eg~~eavsyllgrg-~a~vg-v~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen   11 FGWTALMCAAMEGSNEAVSYLLGRG-VAFVG-VTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             hcchHHHHHhhhcchhHHHHHhccC-ccccc-ccccccchHHHHHHhcChHHHHHHHHHH
Confidence            4555555555555555555555555 22222 3455555555555555555555555554

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.32  E-value=0.00062  Score=54.59  Aligned_cols=73  Identities=18%  Similarity=0.183  Sum_probs=56.0

Q ss_pred             HHHHHHHHHccCCCCccc------ccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHH
Q 037194          105 TSFVQQLLTFMDPEDLML------QDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTAS  178 (215)
Q Consensus       105 ~~~v~~Ll~~~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~  178 (215)
                      ...+++|.++  +...|.      .+..--|+||+|+..|..++|.+|++.|++ +.+.|..|.||..++.   +.++-.
T Consensus       404 p~~ie~lken--~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D-p~~kd~~Grtpy~ls~---nkdVk~  477 (591)
T KOG2505|consen  404 PDSIEALKEN--LLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCD-PSTKDGAGRTPYSLSA---NKDVKS  477 (591)
T ss_pred             hhHHHHHHhc--CCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCC-chhcccCCCCcccccc---cHHHHH
Confidence            5678888887  554433      355567999999999999999999999988 7999999999999887   444433


Q ss_pred             HHhhc
Q 037194          179 FLFHK  183 (215)
Q Consensus       179 ~Ll~~  183 (215)
                      .++.+
T Consensus       478 ~F~a~  482 (591)
T KOG2505|consen  478 IFIAR  482 (591)
T ss_pred             HHHHH
Confidence            33333

>smart00248 ANK ankyrin repeats

Probab=97.08  E-value=0.0013  Score=30.67  Aligned_cols=22  Identities=32%  Similarity=0.342  Sum_probs=10.7

Q ss_pred             ccHHHHHHhcCCHHHHHHHHHc
Q 037194           93 QTVLHVATGAKQTSFVQQLLTF  114 (215)
Q Consensus        93 ~~~L~~a~~~g~~~~v~~Ll~~  114 (215)
                      .+|+|+|+..++.++++.|+..
T Consensus         3 ~~~l~~~~~~~~~~~~~~ll~~   24 (30)
T smart00248        3 RTPLHLAAENGNLEVVKLLLDK   24 (30)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHc
Confidence            4444444444444444444444

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00248 ANK ankyrin repeats

Probab=97.05  E-value=0.0014  Score=30.64  Aligned_cols=26  Identities=31%  Similarity=0.584  Sum_probs=14.2

Q ss_pred             CchhhHHHHhcCcHHHHHHHHHhCCC
Q 037194          127 GNTAFCFAAAVGAVDIANLMLKKNPS  152 (215)
Q Consensus       127 g~t~l~~a~~~~~~~~~~~Ll~~~~~  152 (215)
                      |.||+|+|+..++.++++.|+..+.+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            44555555555555555555555443

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=96.67  E-value=0.0022  Score=51.62  Aligned_cols=44  Identities=25%  Similarity=0.238  Sum_probs=40.7

Q ss_pred             CCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHH
Q 037194           90 EGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAA  135 (215)
Q Consensus        90 ~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~  135 (215)
                      ..-.|+||+|+..|...+|.+||+.  ++|+..+|..|.||+.++.
T Consensus       428 ~ltsT~LH~aa~qg~~k~v~~~Lee--g~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  428 YLTSTFLHYAAAQGARKCVKYFLEE--GCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             cccchHHHHHHhcchHHHHHHHHHh--cCCchhcccCCCCcccccc
Confidence            3456899999999999999999999  8999999999999999887

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.87  E-value=0.33  Score=35.61  Aligned_cols=115  Identities=12%  Similarity=0.155  Sum_probs=79.2

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCC----CchhhHH
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDEN----GNTAFCF  133 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~----g~t~l~~  133 (215)
                      ..|-.|+..-+++.+..++...   .       .-.+++-++..++..+++-+|+.+..   ...+|..    +..-+-|
T Consensus       155 isledAV~AsN~~~i~~~VtdK---k-------dA~~Am~~si~~~K~dva~~lls~f~---ft~~dv~~~~~~~ydieY  221 (284)
T PF06128_consen  155 ISLEDAVKASNYEEISNLVTDK---K-------DAHQAMWLSIGNAKEDVALYLLSKFN---FTKQDVASMEKELYDIEY  221 (284)
T ss_pred             ccHHHHHhhcCHHHHHHHhcch---H-------HHHHHHHHHhcccHHHHHHHHHhhcc---eecchhhhcCcchhhHHH
Confidence            4577788888877777666644   1       12357888888899999999998732   1112211    1112333


Q ss_pred             H--HhcCcHHHHHHHHHhCCCCCCC---CCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          134 A--AAVGAVDIANLMLKKNPSLLGI---RGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       134 a--~~~~~~~~~~~Ll~~~~~~~~~---~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      +  ....+..++++.+.+|-..++.   .-..|.|.|.-|.++++.+++.+|++.|+
T Consensus       222 ~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  222 LLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             HHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            3  3334678899999988543332   33579999999999999999999999997

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=95.26  E-value=0.17  Score=35.76  Aligned_cols=137  Identities=13%  Similarity=0.050  Sum_probs=85.3

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHh
Q 037194           57 RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAA  136 (215)
Q Consensus        57 ~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~  136 (215)
                      +..|..|+..+.+++++..-+.. .   .  .-...++.+-.||+..+.++|+|+-.+.  ...+     -.+-+..|..
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L-~---~--~~~~~q~LFElAC~~qkydiV~WI~qnL--~i~~-----~~~iFdIA~~  113 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDL-E---N--ERYLNQELFELACEEQKYDIVKWIGQNL--HIYN-----PEDIFDIAFA  113 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHh-h---c--chhHHHHHHHHHHHHccccHHHHHhhcc--CCCC-----chhhhhhhhh
Confidence            35578888889888888776654 1   1  1234567889999999999999996652  1111     1345677777


Q ss_pred             cCcHHHH----HHHHHhCCCCCCCCCCCCC----CHHHHHHHhCCHHHHHHHhhcCCCCCCCCCCchHHHHHHhcCchhH
Q 037194          137 VGAVDIA----NLMLKKNPSLLGIRGSKNM----PPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGK  208 (215)
Q Consensus       137 ~~~~~~~----~~Ll~~~~~~~~~~~~~g~----t~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~a~~~~~~~~  208 (215)
                      ..+.++.    .++++....  . .+.+..    --|..|+.+|-...+...++.|+. +    ....+..|+..++-.+
T Consensus       114 ~kDlsLyslGY~l~~~~~~~--~-~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~-~----~~~vls~Av~ynhRkI  185 (192)
T PF03158_consen  114 KKDLSLYSLGYKLLFNRMMS--E-HNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGN-V----DIIVLSQAVKYNHRKI  185 (192)
T ss_pred             ccchhHHHHHHHHHHhhccc--c-cccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCc-c----cHHHHHHHHHhhHHHH
Confidence            7765542    223332221  1 111111    224678888888888888888851 1    1267777778777777


Q ss_pred             HHHhhc
Q 037194          209 YQDIFK  214 (215)
Q Consensus       209 ~~~ll~  214 (215)
                      ..+++.
T Consensus       186 L~yfi~  191 (192)
T PF03158_consen  186 LDYFIR  191 (192)
T ss_pred             HHHhhc
Confidence            766654

These proteins may be involved in promoting survival of infected macrophages [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=94.18  E-value=0.12  Score=31.11  Aligned_cols=46  Identities=15%  Similarity=0.133  Sum_probs=21.6

Q ss_pred             HHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHh
Q 037194           95 VLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK  149 (215)
Q Consensus        95 ~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~  149 (215)
                      .+..|+..|+.++++.+++.  + .++      ...+..|+...+.+++++|+++
T Consensus         9 tl~~Ai~GGN~eII~~c~~~--~-~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    9 TLEYAIIGGNFEIINICLKK--N-KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHhCCCHHHHHHHHHH--h-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            34555555555555555443  1 111      2235555555555555555543

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=93.56  E-value=0.27  Score=29.63  Aligned_cols=47  Identities=17%  Similarity=0.145  Sum_probs=39.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTF  114 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~  114 (215)
                      ..+..|+..|+.|+++.+++.+   ..    +   ..++..|+...+.+++++|++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~---~~----~---~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN---KP----D---NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh---cc----H---HHHHHHHHHHhhHHHHHHHHHh
Confidence            5689999999999999999765   11    1   4579999999999999999997

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=92.23  E-value=1.7  Score=32.10  Aligned_cols=94  Identities=11%  Similarity=-0.008  Sum_probs=65.6

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcchhhh-hhhcCCCCccHHHHHHhc--CCHHHHHHHHHccCCCCccc---ccCCCchh
Q 037194           57 RLLLYKAALKGEMKEIEGLFEKDYRSII-CAAITEGHQTVLHVATGA--KQTSFVQQLLTFMDPEDLML---QDENGNTA  130 (215)
Q Consensus        57 ~~~L~~a~~~g~~~~~~~ll~~~~~~~~-~~~~~~~g~~~L~~a~~~--g~~~~v~~Ll~~~~~~~~~~---~~~~g~t~  130 (215)
                      ..++-.++..+..+++-+|+.+- ...- +...-..+.--+-++.+.  .+..+++++++++ -.++|.   +-..|.|-
T Consensus       180 ~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~G-lv~vN~~F~~~NSGdtM  257 (284)
T PF06128_consen  180 HQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRG-LVDVNKKFQKVNSGDTM  257 (284)
T ss_pred             HHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhcc-ccccchhhhccCCcchH
Confidence            46788888888888899999874 1100 001112233345555444  3577899999983 355654   24579999


Q ss_pred             hHHHHhcCcHHHHHHHHHhCCC
Q 037194          131 FCFAAAVGAVDIANLMLKKNPS  152 (215)
Q Consensus       131 l~~a~~~~~~~~~~~Ll~~~~~  152 (215)
                      |.-|+..++.+++.+|+++|+.
T Consensus       258 LDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  258 LDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             HHhHHhcCcHHHHHHHHHcCcc
Confidence            9999999999999999999985

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=91.05  E-value=2.3  Score=30.27  Aligned_cols=111  Identities=15%  Similarity=0.084  Sum_probs=75.3

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHH----HHHHccCCCCcccccC--CCc
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQ----QLLTFMDPEDLMLQDE--NGN  128 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~----~Ll~~~~~~~~~~~~~--~g~  128 (215)
                      ..+..+..|++..+.++|+|+-..-        .-.+-.+.+-+|....+.++..    ++++.+...  ...|.  --.
T Consensus        75 ~~q~LFElAC~~qkydiV~WI~qnL--------~i~~~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~--~~~d~~~ll~  144 (192)
T PF03158_consen   75 LNQELFELACEEQKYDIVKWIGQNL--------HIYNPEDIFDIAFAKKDLSLYSLGYKLLFNRMMSE--HNEDPTSLLT  144 (192)
T ss_pred             HHHHHHHHHHHHccccHHHHHhhcc--------CCCCchhhhhhhhhccchhHHHHHHHHHHhhcccc--cccCHHHHHH
Confidence            4457799999999999999994432        1122345677888888877522    223332111  01111  011


Q ss_pred             hhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhh
Q 037194          129 TAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFH  182 (215)
Q Consensus       129 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~  182 (215)
                      .-|.+|+..|-...+.-.+..|.+ ++      .++|..|+...+..++.+++.
T Consensus       145 ~hl~~a~~kgll~F~letlkygg~-~~------~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  145 QHLEKAAAKGLLPFVLETLKYGGN-VD------IIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHHCCCHHHHHHHHHcCCc-cc------HHHHHHHHHhhHHHHHHHhhc
Confidence            246789999999998888888887 33      389999999999999998874

These proteins may be involved in promoting survival of infected macrophages [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	215
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		3e-05

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPS 152
           +T LH+A        V+ LL   +  D+   D NG T    AA++G ++I  ++LK    
Sbjct: 36  RTPLHMAAAVGHLEIVEVLLR--NGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGAD 93
Query: 153 LLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDR--KVIFITSVDTG 204
            +  + +  + PLY AA +G  +    L  K   ++  +D+  K  F  S+D G
Sbjct: 94  -VNAKDATGITPLYLAAYWGHLEIVEVLL-KHGADVNAQDKFGKTAFDISIDIG 145

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	215
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-07
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-06
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-05
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-04
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-06
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-06
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-06
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	7e-06
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-04
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-06
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	6e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	6e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-04
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-05
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-05
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-05
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	6e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-04
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-04
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-05
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	9e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-04
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	6e-05
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-05
2rfa_A	232	Transient receptor potential cation channel subfa	8e-05
2rfa_A	232	Transient receptor potential cation channel subfa	5e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-04
2pnn_A	273	Transient receptor potential cation channel subfa	1e-04
2pnn_A	273	Transient receptor potential cation channel subfa	4e-04
2etb_A	256	Transient receptor potential cation channel subfam	2e-04
2etb_A	256	Transient receptor potential cation channel subfam	5e-04
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-04
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	6e-04
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-04
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	8e-04
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	8e-04
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	9e-04

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 49.5 bits (119), Expect = 1e-07
 Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 13/96 (13%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
           QT LH+A    Q    + LL         D  L+D  GNT    A   G +    ++ + 
Sbjct: 46  QTPLHLAVITNQPEIAEALL-----GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQS 100

Query: 150 --NPSLLGIRGSKN---MPPLYFAALFGQTDTASFL 180
              P L  I  + N      L+ A++ G       L
Sbjct: 101 CTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELL 136

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 87  AITEGHQTVLHVATGAKQTSFVQQLLTFM--DPEDLMLQDENGNTAFCFAAAVGAVDIAN 144
            +TE   + LH+A   ++ +   +++  +  D   L  Q+    T    A      +IA 
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAE 62

Query: 145 LMLKK--NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
            +L    +P L   RG     PL+ A   G   +   L
Sbjct: 63  ALLGAGCDPELRDFRG---NTPLHLACEQGCLASVGVL 97

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 21/148 (14%), Positives = 41/148 (27%), Gaps = 32/148 (21%)

Query: 60  LYKAALKGEMKEIEGLFE---KDYRSIICAAITEGH---------------QTVLHVAT- 100
           ++ A +  +   +  L E   +  +                          QT LH    
Sbjct: 88  IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVG 147

Query: 101 -GAKQTSFVQQLLTFMDPE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLG- 155
            G +    ++ L+     +       +D+   T    A      +  +LM+   PS    
Sbjct: 148 LGPEYLEMIKILV-----QLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSL 202

Query: 156 ---IRGSKNMPPLYFAALFGQTDTASFL 180
                  +    L++A L    D A   
Sbjct: 203 RLDYANKQGNSHLHWAILINWEDVAMRF 230

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 13/91 (14%), Positives = 34/91 (37%), Gaps = 4/91 (4%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
           +T L  A   +    +  ++  +  +    L   ++ GN+   +A  +   D+A   ++ 
Sbjct: 174 ETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM 233

Query: 150 NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
               + +  +++  PLY +           L
Sbjct: 234 GID-VNMEDNEHTVPLYLSVRAAMVLLTKEL 263

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 38.7 bits (91), Expect = 7e-04
 Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 93  QTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNP 151
              +HVA    QT  V++L+   + P     Q+  G TA   A   G VD A  +     
Sbjct: 21  MEKIHVAARKGQTDEVRRLIETGVSPTI---QNRFGCTALHLACKFGCVDTAKYLASVGE 77

Query: 152 SLLGIRGSKNMPPLYFAALFGQTDTASFL 180
                       P++ A +  +TD    L
Sbjct: 78  V---HSLWHGQKPIHLAVMANKTDLVVAL 103

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 38.7 bits (91), Expect = 7e-04
 Identities = 12/101 (11%), Positives = 27/101 (26%), Gaps = 16/101 (15%)

Query: 93  QTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNP 151
            + LH A          + +   +D     ++D         +     V +   +L+K  
Sbjct: 212 NSHLHWAILINWEDVAMRFVEMGIDVN---MEDNEHTVPLYLSVRAAMVLLTKELLQKTD 268

Query: 152 SLLGIRGSKN------------MPPLYFAALFGQTDTASFL 180
             L      +            +  +  AA   + +    L
Sbjct: 269 VFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLL 309

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 23/126 (18%), Positives = 39/126 (30%), Gaps = 19/126 (15%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED 119
                  G                  A +   ++T    A        + QLL   D + 
Sbjct: 19  YLIEWKDGHSPSWVPSSYIA------ADVVSEYETPWWTAARKADEQALSQLLEDRDVDA 72

Query: 120 LMLQDENGNTAFCFAAAVGAVDIANLMLKK----NPSLLGIRGSKN-MPPLYFAALFGQT 174
               DENG TA  F A +G+     L+ +     +      R  +  +  L+ AA + + 
Sbjct: 73  ---VDENGRTALLFVAGLGSDKCVRLLAEAGADLD-----HRDMRGGLTALHMAAGYVRP 124

Query: 175 DTASFL 180
           +    L
Sbjct: 125 EVVEAL 130

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 23/129 (17%), Positives = 40/129 (31%), Gaps = 19/129 (14%)

Query: 57  RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMD 116
            +        G                  A +   ++T    A        + QLL   D
Sbjct: 15  AMEYLIEWKDGHSPSWVPSSYIA------ADVVSEYETPWWTAARKADEQALSQLLEDRD 68

Query: 117 PEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK----NPSLLGIRGSKN-MPPLYFAALF 171
            +     DENG TA  F A +G+     L+ +     +      R  +  +  L+ AA +
Sbjct: 69  VD---AVDENGRTALLFVAGLGSDKCVRLLAEAGADLD-----HRDMRGGLTALHMAAGY 120

Query: 172 GQTDTASFL 180
            + +    L
Sbjct: 121 VRPEVVEAL 129

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 45.1 bits (108), Expect = 4e-06
 Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 30/136 (22%)

Query: 60  LYKAALKGEMKEIEGLF--------EKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQL 111
           L++A ++ E  +++ L         +KD          +G +  LH +   +       L
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQ---------DG-RIPLHWSVSFQAHEITSFL 55

Query: 112 LTFM-DPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMP------P 164
           L+ M +       D++G T F  A +VG +++   +  +      ++   N         
Sbjct: 56  LSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR-----PLKPDLNKITNQGVTC 110

Query: 165 LYFAALFGQTDTASFL 180
           L+ A      + + FL
Sbjct: 111 LHLAVGKKWFEVSQFL 126

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 44.4 bits (106), Expect = 7e-06
 Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 9/124 (7%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPE- 118
            + A   G ++ ++ L+++  +  +     +G  T LH+A G K     Q L+     E 
Sbjct: 76  FHIACSVGNLEVVKSLYDRPLKPDLNKITNQG-VTCLHLAVGKKWFEVSQFLI-----EN 129

Query: 119 --DLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDT 176
              + ++D+        AA+VG++ +  L+     S +  +  +   PL+ A   G  D 
Sbjct: 130 GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDA 189

Query: 177 ASFL 180
           A  L
Sbjct: 190 AVLL 193

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 40.1 bits (95), Expect = 2e-04
 Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 1/88 (1%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPS 152
            T  H+A        V+ L       DL      G T    A      +++  +++   S
Sbjct: 73  WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS 132

Query: 153 LLGIRGSKNMPPLYFAALFGQTDTASFL 180
            + I+   N  PL+ AA  G       L
Sbjct: 133 -VRIKDKFNQIPLHRAASVGSLKLIELL 159

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 39.0 bits (92), Expect = 4e-04
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 3/96 (3%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK--N 150
              LH A    +   VQ+LL    P  L+ +D++G     ++ +  A +I + +L K  N
Sbjct: 3   NYPLHQACMENEFFKVQELLH-SKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 151 PSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEK 186
            +L          P + A   G  +    L+ +  K
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLK 97

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 44.8 bits (107), Expect = 8e-06
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 22/129 (17%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAI---TEGHQTVLHVATGAKQTSFVQQLLTFMD 116
           L+ A+  G +  ++ L ++       A+        +T LH+A  A  T   + LL    
Sbjct: 18  LHVASFMGHLPIVKNLLQRG------ASPNVSNVKVETPLHMAARAGHTEVAKYLL---- 67

Query: 117 PE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKK--NPSLLGIRGSKNMPPLYFAALF 171
            +    +  + ++  T    AA +G  ++  L+L+   NP+   +  +    PL+ AA  
Sbjct: 68  -QNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPN---LATTAGHTPLHIAARE 123

Query: 172 GQTDTASFL 180
           G  +T   L
Sbjct: 124 GHVETVLAL 132

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.5 bits (101), Expect = 5e-05
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 93  QTVLHVAT--GAKQTSFVQQLLTFM-DPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
           QT LH A   G      V+ LL    +P    L    G+T    AA  G V+    +L+K
Sbjct: 81  QTPLHCAARIGHTNM--VKLLLENNANPN---LATTAGHTPLHIAAREGHVETVLALLEK 135

Query: 150 NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
             S       K   PL+ AA +G+   A  L
Sbjct: 136 EAS-QACMTKKGFTPLHVAAKYGKVRVAELL 165

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.1 bits (100), Expect = 6e-05
 Identities = 30/131 (22%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAI---TEGHQTVLHVATGAKQTSFVQQLLTF-M 115
           L+  A +G +   + L +          +   T    T LHVA+       V+ LL    
Sbjct: 282 LHLVAQEGHVPVADVLIKHG------VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQA 335

Query: 116 DPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTD 175
           D      + + G +    AA  G  DI  L+LK   S      S    PL  A   G   
Sbjct: 336 DVN---AKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS-PNEVSSDGTTPLAIAKRLGYIS 391

Query: 176 TASFLFHKSEK 186
               L   +++
Sbjct: 392 VTDVLKVVTDE 402

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.1 bits (100), Expect = 6e-05
 Identities = 24/91 (26%), Positives = 32/91 (35%), Gaps = 9/91 (9%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
            T LHVA    +    + LL     E         +NG T    A     +DI  L+L +
Sbjct: 147 FTPLHVAAKYGKVRVAELLL-----ERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR 201

Query: 150 NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
             S           PL+ AA   Q + A  L
Sbjct: 202 GGS-PHSPAWNGYTPLHIAAKQNQVEVARSL 231

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 41.7 bits (99), Expect = 8e-05
 Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 9/91 (9%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
            T LH+A    Q    + LL     +       +   G T    AA  G  ++  L+L K
Sbjct: 213 YTPLHIAAKQNQVEVARSLL-----QYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK 267

Query: 150 NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
             +   +     + PL+  A  G    A  L
Sbjct: 268 QAN-GNLGNKSGLTPLHLVAQEGHVPVADVL 297

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 41.7 bits (99), Expect = 9e-05
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 9/91 (9%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
            T LH+A        V  LL     E         + G T    AA  G V +A L+L++
Sbjct: 114 HTPLHIAAREGHVETVLALL-----EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 168

Query: 150 NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
           +       G   + PL+ A      D    L
Sbjct: 169 DAH-PNAAGKNGLTPLHVAVHHNNLDIVKLL 198

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 41.3 bits (98), Expect = 1e-04
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 93  QTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNP 151
            T LHVA        V+ LL     P        NG T    AA    V++A  +L+   
Sbjct: 180 LTPLHVAVHHNNLDIVKLLLPRGGSPH---SPAWNGYTPLHIAAKQNQVEVARSLLQYGG 236

Query: 152 SLLGIRGSKNMPPLYFAALFGQTDTASFL 180
           S       + + PL+ AA  G  +  + L
Sbjct: 237 S-ANAESVQGVTPLHLAAQEGHAEMVALL 264

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 40.9 bits (97), Expect = 1e-04
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 123 QDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
             E+G T    A+ +G + I   +L++  S   +   K   PL+ AA  G T+ A +L
Sbjct: 10  GGESGLTPLHVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYL 66

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 18/127 (14%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAI---TEGHQTVLHVATGAKQTSFVQQLLTF-M 115
           L+ AA +G  + +  L  K       A      +   T LH+            L+   +
Sbjct: 249 LHLAAQEGHAEMVALLLSKQ------ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGV 302

Query: 116 DPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK--NPSLLGIRGSKNMPPLYFAALFGQ 173
             +        G T    A+  G + +   +L+   + +    +      PL+ AA  G 
Sbjct: 303 MVD---ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVN---AKTKLGYSPLHQAAQQGH 356

Query: 174 TDTASFL 180
           TD  + L
Sbjct: 357 TDIVTLL 363

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 24/97 (24%), Positives = 34/97 (35%), Gaps = 6/97 (6%)

Query: 87  AITEGHQTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDIANL 145
            +TE   T LH+A   +   F+  LL F    E L LQ++ G TA   AA +G       
Sbjct: 4   YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63

Query: 146 MLKK--NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
           +           +        L+ A        A  L
Sbjct: 64  LYAAGAGVL---VAERGGHTALHLACRVRAHTCACVL 97

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 2/96 (2%)

Query: 87  AITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLM 146
            I   +     +A        + +L      E + +       AF  AA  G + + N +
Sbjct: 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRL 182

Query: 147 LKKNPSLLG--IRGSKNMPPLYFAALFGQTDTASFL 180
            +  P+     I+        + A   G  +  +FL
Sbjct: 183 CELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL 218

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 43.0 bits (101), Expect = 3e-05
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 14/125 (11%)

Query: 59  LLYKAALKGEMKEIEGLFEKDYRS--IICAAITEGHQTVLHVATGAKQTSFVQQLLTFMD 116
           L Y    +   +      +K  +S  I   A   G  + L           +  LLT   
Sbjct: 69  LYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDT---------LCLLLT--S 117

Query: 117 PEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSL-LGIRGSKNMPPLYFAALFGQTD 175
            E + +       AF  AA  G + + N + +  P+  + +  ++N      AA  G   
Sbjct: 118 DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLH 177

Query: 176 TASFL 180
             + L
Sbjct: 178 VLNRL 182

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 13/121 (10%), Positives = 28/121 (23%), Gaps = 10/121 (8%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED 119
              +   G    +          ++   I    + +L           ++ L        
Sbjct: 258 FKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALA------P 311

Query: 120 LMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASF 179
                 + N     A  +G      L+L    S+  +         Y     G+ D  + 
Sbjct: 312 TATIPGDANELLRLALRLGNQGACALLL----SIPSVLALTKANNYYINETGGRLDLRAV 367

Query: 180 L 180
            
Sbjct: 368 A 368

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPS 152
             +  + T   ++  ++  L+  D       D +G++A  +A A   V +   +L     
Sbjct: 2   MDLSRINTW--KSKQLKSFLSSKDTF---KADVHGHSASYYAIADNNVRLVCTLLNAGAL 56

Query: 153 LLGIRGSKNMPPLYFAALFGQTDTASFL 180
                  +N  PL+ AA    T     L
Sbjct: 57  ---KNLLENEFPLHQAATLEDTKIVKIL 81

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 41.7 bits (99), Expect = 6e-05
 Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 9/123 (7%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED 119
           LY A   G M+ ++   +K+    +      G +T  + A      S V   L+ +    
Sbjct: 99  LYYAVDSGNMQTVKLFVKKN--WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156

Query: 120 LMLQDENGNTAFCFAAAVGAVDIANLMLKK--NPSLLGIRGSKNMPPLYFAALFGQTDTA 177
                    +        G VD+  L+L    + +         +P +  A      +  
Sbjct: 157 ---DLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLL--FIPDIKLAIDNKDIEML 211

Query: 178 SFL 180
             L
Sbjct: 212 QAL 214

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 28/125 (22%), Positives = 41/125 (32%), Gaps = 15/125 (12%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGH-QTVLHVATGAKQTSFVQQLLTF-MDP 117
            Y A     ++ +  L          A       +  LH A   + T  V+ LL   +D 
Sbjct: 35  SYYAIADNNVRLVCTLLNAG------ALKNLLENEFPLHQAATLEDTKIVKILLFSGLDD 88

Query: 118 EDLMLQDENGNTAFCFAAAVGAVDIANLMLKK--NPSLLGIRGSKNMPPLYFAALFGQTD 175
                 D+ GNTA  +A   G +    L +KK       G  G K     Y A +     
Sbjct: 89  SQ---FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKT--SFYHAVMLNDVS 143

Query: 176 TASFL 180
             S+ 
Sbjct: 144 IVSYF 148

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 39.0 bits (92), Expect = 5e-04
 Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 20/128 (15%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGH---QTVLHVATGAKQTSFVQQLLTFMD 116
           L++AA   + K ++ L             ++      T L+ A  +     V+  +    
Sbjct: 66  LHQAATLEDTKIVKILLFSG------LDDSQFDDKGNTALYYAVDSGNMQTVKLFV---- 115

Query: 117 PE---DLMLQDENG-NTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFG 172
            +    LM   + G  T+F  A  +  V I +  L + PS      +  +  ++     G
Sbjct: 116 -KKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNG 172

Query: 173 QTDTASFL 180
             D    L
Sbjct: 173 HVDMMILL 180

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 19/164 (11%), Positives = 44/164 (26%), Gaps = 36/164 (21%)

Query: 47  GKKRKLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGH-------------- 92
            K  +   S +  L +A+  G +K      +             G+              
Sbjct: 28  RKNHQSITSSQHSLLEASYDGYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIP 87

Query: 93  -------QTVLHVAT-GAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDIA 143
                     LH    G+      + +    ++  D      +  T   + A+  + + +
Sbjct: 88  TEPEPESPIKLHTEAAGSYAI--TEPITRESVNIID----PRHNRTVLHWIASNSSAEKS 141

Query: 144 NLMLKKNPSLLGIRG----SKN---MPPLYFAALFGQTDTASFL 180
             ++          G    + +     PL  A L  +    ++L
Sbjct: 142 EDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYL 185

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 41.5 bits (98), Expect = 9e-05
 Identities = 22/137 (16%), Positives = 43/137 (31%), Gaps = 23/137 (16%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVAT--GAKQTSFVQQLL----- 112
           L++AA   +   +  +            +     T L +      +      +LL     
Sbjct: 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGA 262

Query: 113 --TFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRG----SKN---MP 163
              +        +   G TA  +AA V  + I          L+G +G     ++     
Sbjct: 263 KVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKY-------LVGEKGSNKDKQDEDGKT 315

Query: 164 PLYFAALFGQTDTASFL 180
           P+  AA  G+ +   +L
Sbjct: 316 PIMLAAQEGRIEVVMYL 332

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 42.5 bits (101), Expect = 4e-05
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
            T LH+A G  +   VQ LL     +   D+  +D+ G      A + G  ++  L+LK 
Sbjct: 59  STPLHLAAGYNRVRIVQLLL-----QHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKH 113

Query: 150 NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
               +         PL+ AA   + +  S L
Sbjct: 114 GAC-VNAMDLWQFTPLHEAASKNRVEVCSLL 143

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 39.0 bits (92), Expect = 5e-04
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 9/98 (9%)

Query: 87  AITEGHQTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDIANL 145
           A  +G    LH A         + LL            D    T    AA+   V++ +L
Sbjct: 86  AKDKGGLVPLHNACSYGHYEVTELLLKHGACVNA---MDLWQFTPLHEAASKNRVEVCSL 142

Query: 146 MLKK--NPSLLGIRGSKNMPPLYFAALFGQTDTASFLF 181
           +L    +P+L+   G      +  A      +  ++ F
Sbjct: 143 LLSHGADPTLVNCHG---KSAVDMAPTPELRERLTYEF 177

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 41.4 bits (98), Expect = 6e-05
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 13/126 (10%)

Query: 60  LYKAALKGEMKEIEGLFEK--DYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTF-MD 116
           L  ++L+GE   ++ +  +  D          EG  T LH A  A  T  V+ L+ F ++
Sbjct: 41  LLDSSLEGEFDLVQRIIYEVDD----PSLPNDEG-ITALHNAVCAGHTEIVKFLVQFGVN 95

Query: 117 PEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK--NPSLLGIRGSKNMPPLYFAALFGQT 174
                  D +G T    AA+   V +   +++       +     +           G T
Sbjct: 96  VNA---ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 152

Query: 175 DTASFL 180
             + FL
Sbjct: 153 QCSQFL 158

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 41.1 bits (97), Expect = 8e-05
 Identities = 25/146 (17%), Positives = 46/146 (31%), Gaps = 37/146 (25%)

Query: 60  LYKAALKGEMKEIEGLF--------EKDYRSIICAAITEGHQTVLHVAT--GAKQTSFVQ 109
           L  AA + +++ +  L         ++            G +T LH+A      +     
Sbjct: 7   LLLAAKENDVQALSKLLKFEGCEVHQRGA---------MG-ETALHIAALYDNLEA--AM 54

Query: 110 QLLTF---MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLK-------KNPSLLGIRGS 159
            L+     +  E +  +   G TA   A     V++   +L        +    +     
Sbjct: 55  VLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRP 114

Query: 160 KNMP-----PLYFAALFGQTDTASFL 180
            N+      PL FAA  G  +    L
Sbjct: 115 HNLIYYGEHPLSFAACVGSEEIVRLL 140

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 38.7 bits (91), Expect = 5e-04
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 9/94 (9%)

Query: 93  QTVLHVATGAKQTSFVQQLLTF--MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKN 150
           ++ L +A        + +LL F   +      +   G TA   AA    ++ A ++++  
Sbjct: 4   ESPLLLAAKENDVQALSKLLKFEGCEVHQ---RGAMGETALHIAALYDNLEAAMVLMEAA 60

Query: 151 PSLLGIRG-SKN---MPPLYFAALFGQTDTASFL 180
           P L+     S+       L+ A +    +    L
Sbjct: 61  PELVFEPMTSELYEGQTALHIAVINQNVNLVRAL 94

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 40.9 bits (97), Expect = 1e-04
 Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 16/130 (12%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAI---TEGHQTVLHVATGAKQTSFVQQLLTFMD 116
           L+ A ++G +  +  L     +      +       QT LH+A      S V+ L+    
Sbjct: 13  LHIAVVQGNLPAVHRLVNLFQQG--GRELDIYNNLRQTPLHLAVITTLPSVVRLLV---- 66

Query: 117 PE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKN---MPPLYFAAL 170
                  M  D +G TA   A    +      +L           ++N   +  L+ A  
Sbjct: 67  -TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 125

Query: 171 FGQTDTASFL 180
               +T   L
Sbjct: 126 TECQETVQLL 135

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 39.0 bits (92), Expect = 5e-04
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 12/95 (12%)

Query: 93  QTVLHVATGAKQTSFVQQLLTF--MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK- 149
           QT  H+A   +  + ++ LL        DL  ++ +G TA   A      +   L+L++ 
Sbjct: 80  QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG 139

Query: 150 ---NPSLLGIRGSKN-MPPLYFAALFGQTDTASFL 180
              +         K+   PL  A           L
Sbjct: 140 ADID-----AVDIKSGRSPLIHAVENNSLSMVQLL 169

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 24/142 (16%), Positives = 36/142 (25%), Gaps = 22/142 (15%)

Query: 57  RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLL---- 112
            LLL  A     +K+                     QT LH+A   +  + V  L+    
Sbjct: 74  ALLLDVARKTDSLKQFVN--------ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGA 125

Query: 113 --------TFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGI--RGSKNM 162
                    F            G      AA    + I   +L+ +     I  R S   
Sbjct: 126 DVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGN 185

Query: 163 PPLYFAALFGQTDTASFLFHKS 184
             L+           +  F  S
Sbjct: 186 TVLHALVEVADNTVDNTKFVTS 207

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 16/104 (15%)

Query: 93  QTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLK--- 148
           +  L +A    Q + V+ LL     P D+  +D  GNT       V    + N       
Sbjct: 149 ELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSM 208

Query: 149 ------------KNPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
                           L  I   K + PL  AA  G+    +++
Sbjct: 209 YNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 29/154 (18%), Positives = 50/154 (32%), Gaps = 29/154 (18%)

Query: 56  ERLLLYKAALKGEMKEIEGLFE---KDYRSIICAAITEGH--QTVLHVATGAKQ---TSF 107
           +R  L+    +G  +E+ GL E    + + +  +A TEG   +T L  A    Q    + 
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 108 VQQLLTFMDPEDLMLQ---------DENGNTAFCFAAAVGAVDIANLMLKK--------- 149
           +  LL                       G++A   A    ++    L+++          
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRAC 121

Query: 150 ---NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
                   G        PL  AA   Q D  ++L
Sbjct: 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL 155

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 27/151 (17%), Positives = 43/151 (28%), Gaps = 28/151 (18%)

Query: 60  LYKAALKGEMKEIEGLFEK----------DYRSIICAAITEGHQTVLHVATGAKQTSFVQ 109
           L+ A  K  ++ ++ L E            +            +  L +A   KQ   V 
Sbjct: 94  LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVT 153

Query: 110 QLLTFMDPE-DLMLQDENGNT----------------AFCFAAAVGAVDIANLMLKKNPS 152
            LL        L   D  GNT                A       G + +    L     
Sbjct: 154 YLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR-LCPTVQ 212

Query: 153 LLGIRGSKNMPPLYFAALFGQTDTASFLFHK 183
           L  I   + + PL  AA  G+ +    +  +
Sbjct: 213 LEEISNHQGLTPLKLAAKEGKIEIFRHILQR 243

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 27/148 (18%), Positives = 43/148 (29%), Gaps = 27/148 (18%)

Query: 60  LYKAALKGEMKEIEGLF-------EKDYRSIICAAITEGH----QTVLHVATGAKQTSFV 108
           L+ A  +     +E L         +            G+    +  L +A    Q   V
Sbjct: 97  LHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIV 156

Query: 109 QQLLTFMDPE-DLMLQDENGNTAFCFAAAVG---------AVDIANLMLKKNPSLLGIRG 158
             L      + DL  QD  GNT      A+             + +L+L K   L     
Sbjct: 157 HYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTN 216

Query: 159 SKNMP------PLYFAALFGQTDTASFL 180
            + +       PL  AA  G+      +
Sbjct: 217 LEALLNNDGLSPLMMAAKTGKIGIFQHI 244

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 8/91 (8%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
            T L++A         + L+     +   D+ LQ+   ++ + +A A G  +I   MLK 
Sbjct: 40  NTPLNIAVHNNDIEIAKALI-----DRGADINLQNSISDSPYLYAGAQGRTEILAYMLKH 94

Query: 150 NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
               L          L  AA  G  D    L
Sbjct: 95  ATPDLNKHNRYGGNALIPAAEKGHIDNVKLL 125

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 38.9 bits (92), Expect = 4e-04
 Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 10/92 (10%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK--- 149
           +T LH A  A      Q L+      DL  +  +G T    AA +    +   ++     
Sbjct: 59  RTPLHAAVSADAQGVFQILIR-NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD 117

Query: 150 -NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
            N              L++AA     D A  L
Sbjct: 118 VN-----AVDDLGKSALHWAAAVNNVDAAVVL 144

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 38.9 bits (92), Expect = 4e-04
 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 13/93 (13%)

Query: 93  QTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK-- 149
            T L +A        ++ L+    D       D+ G +A  +AAAV  VD A ++LK   
Sbjct: 93  TTPLILAARLAVEGMLEDLINSHADVNA---VDDLGKSALHWAAAVNNVDAAVVLLKNGA 149

Query: 150 --NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
             +     ++ ++   PL+ AA  G  +TA  L
Sbjct: 150 NKD-----MQNNREETPLFLAAREGSYETAKVL 177

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 38.9 bits (92), Expect = 5e-04
 Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 4/98 (4%)

Query: 84  ICAAITEGHQTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDI 142
           +        +T LH+A    ++   ++LL    D      QD  G T    A +  A  +
Sbjct: 17  LHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI---QDNMGRTPLHAAVSADAQGV 73

Query: 143 ANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
             ++++   + L  R      PL  AA          L
Sbjct: 74  FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL 111

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 38.6 bits (91), Expect = 6e-04
 Identities = 21/98 (21%), Positives = 28/98 (28%), Gaps = 13/98 (13%)

Query: 93  QTVLHVATGAKQTSFVQQLLTF-MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLK--- 148
            T   +A  A     ++  L+   D  +    D  G TAF  AA  G V     + K   
Sbjct: 73  ATPFLLAAIAGSVKLLKLFLSKGADVNE---CDFYGFTAFMEAAVYGKVKALKFLYKRGA 129

Query: 149 ------KNPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
                 K               L  AA  G  +    L
Sbjct: 130 NVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL 167

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 38.6 bits (91), Expect = 7e-04
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPS 152
           +T LH A  A      Q L+      DL  +  +G T    AA +    +   ++  +  
Sbjct: 91  RTPLHAAVSADAQGVFQILIRN-RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD 149

Query: 153 LLGIRGSKNMPPLYFAALFGQTDTASFL 180
            +          L++AA     D A  L
Sbjct: 150 -VNAVDDLGKSALHWAAAVNNVDAAVVL 176

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 37.8 bits (89), Expect = 8e-04
 Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 13/93 (13%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPE---DLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
              +H      +  ++   +     E    +   DE G T   +AAA G + +   +L+ 
Sbjct: 4   SLSVHQLAAQGEMLYLATRI-----EQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQN 58

Query: 150 --NPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
             +P    + G      L  A   G TD    L
Sbjct: 59  GADPQ---LLGKGRESALSLACSKGYTDIVKML 88

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 38.3 bits (89), Expect = 8e-04
 Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 2/83 (2%)

Query: 123 QDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLF- 181
           +D+ G +    AA+ G  +I   +L K    +         PL++AA   + + A  L  
Sbjct: 69  KDDAGWSPLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLE 127

Query: 182 HKSEKELPTEDRKVIFITSVDTG 204
             +  +            +   G
Sbjct: 128 GGANPDAKDHYDATAMHRAAAKG 150

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 38.2 bits (90), Expect = 9e-04
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 12/98 (12%)

Query: 87  AITEGHQTVLHVATGAKQTSFVQQLLTFMDPE---DLMLQDENGNTAFCFAAAVGAVDIA 143
            IT  H + LH A      S V+ LL     +    +     + +T    A   G+ D  
Sbjct: 87  IITADHVSPLHEACLGGHLSCVKILL-----KHGAQVNGVTADWHTPLFNACVSGSWDCV 141

Query: 144 NLMLKKNPSLLGIRGSKN-MPPLYFAALFGQTDTASFL 180
           NL+L+   S   ++   +   P++ AA  G  +  + L
Sbjct: 142 NLLLQHGAS---VQPESDLASPIHEAARRGHVECVNSL 176

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	215
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.98
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.98
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.98
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.98
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.97
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.97
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.97
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.97
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.97
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.97
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.97
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.97
2etb_A	256	Transient receptor potential cation channel subfam	99.97
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.97
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.97
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.97
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.97
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.97
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.97
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.97
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.97
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.97
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.96
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.96
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.96
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.96
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.96
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.96
2pnn_A	273	Transient receptor potential cation channel subfa	99.96
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.96
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.96
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.96
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.96
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.96
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.96
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.96
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.96
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.96
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.96
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.96
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.96
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.96
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.96
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.96
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.95
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.95
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.95
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.95
2etb_A	256	Transient receptor potential cation channel subfam	99.95
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.95
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.95
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.95
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.95
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.95
2pnn_A	273	Transient receptor potential cation channel subfa	99.95
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.95
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.95
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.95
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.95
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.95
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.95
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.94
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.94
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.94
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.94
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.94
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.94
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.94
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.94
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.94
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.94
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.94
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.94
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.94
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.93
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.93
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.93
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.93
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.93
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.93
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.93
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.93
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.93
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.93
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.92
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.92
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.92
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.92
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.92
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.92
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.92
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.91
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.91
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.91
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.91
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.91
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.91
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.9
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.89
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.88
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.87
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.87
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.86
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.86
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.86
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.86
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.86
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.84
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.84
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.78

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=1.9e-33  Score=198.19  Aligned_cols=152  Identities=22%  Similarity=0.285  Sum_probs=143.0

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      ..|+.|+..|+.++|+.|++.| ..+  ..++..|+||||+|+..++.+++++|++.  +++++.+|..|+||||+|+..
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~G-adv--n~~d~~g~t~l~~a~~~~~~~~~~~ll~~--gad~~~~d~~g~TpLh~A~~~   80 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENG-ADV--NASDSDGRTPLHHAAENGHKEVVKLLISK--GADVNAKDSDGRTPLHHAAEN   80 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHT
T ss_pred             HHHHHHHHcCCHHHHHHHHHCC-CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHhc--ccchhhhccCCCCHHHHHHHc
Confidence            4699999999999999999998 544  35789999999999999999999999999  999999999999999999999


Q ss_pred             CcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          138 GAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       138 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      |+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|+ ....+..|.||++.|+..|+.+++++|+++
T Consensus        81 g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~  158 (169)
T 4gpm_A           81 GHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ  158 (169)
T ss_dssp             TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred             CCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            999999999999999 79999999999999999999999999999999 777888899999999999999999999874

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.98  E-value=1.7e-31  Score=187.88  Aligned_cols=154  Identities=21%  Similarity=0.193  Sum_probs=143.6

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .|.||||.|+..|+.+.+++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.++..|.||||+|
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A   76 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQE-NVI--NHTDEEGFTPLMWAAAHGQIAVVEFLLQN--GADPQLLGKGRESALSLA   76 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHS-SCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHH
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcC-CCc--CCCCCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCcCCCCCcHHHHH
Confidence            4678999999999999999999998 443  35788999999999999999999999999  999999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      +..++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..|+.+++++|+
T Consensus        77 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~  155 (167)
T 3v31_A           77 CSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIE  155 (167)
T ss_dssp             HHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence            999999999999999999 79999999999999999999999999999998 6677888999999999999999999998


Q ss_pred             c
Q 037194          214 K  214 (215)
Q Consensus       214 ~  214 (215)
                      +
T Consensus       156 ~  156 (167)
T 3v31_A          156 S  156 (167)
T ss_dssp             H
T ss_pred             H
Confidence            6

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.98  E-value=3e-31  Score=187.51  Aligned_cols=153  Identities=19%  Similarity=0.211  Sum_probs=142.4

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHh
Q 037194           57 RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAA  136 (215)
Q Consensus        57 ~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~  136 (215)
                      .++||.|+..|+.+.++.|++.+ +.... ..+..|.||||+|+..|+.+++++|++.  +.+++.++..|.||||+|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~-~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~   78 (172)
T 3v30_A            3 SLSIHQLAAQGELDQLKEHLRKG-DNLVN-KPDERGFTPLIWASAFGEIETVRFLLEW--GADPHILAKERESALSLAST   78 (172)
T ss_dssp             -CCHHHHHHTTCHHHHHHHHTTC-SGGGG-CCCTTSCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHH
T ss_pred             hhhHHHHHHcCCHHHHHHHHHcC-ccccc-CCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCchhhcccCCCHHHHHHH
Confidence            47899999999999999999998 55443 5788999999999999999999999999  99999999999999999999


Q ss_pred             cCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          137 VGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       137 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      .++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..++.+++++|++
T Consensus        79 ~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~  156 (172)
T 3v30_A           79 GGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIEN  156 (172)
T ss_dssp             TTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence            9999999999999999 79999999999999999999999999999998 66777888999999999999999999986

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.98  E-value=1.9e-31  Score=191.86  Aligned_cols=155  Identities=15%  Similarity=0.163  Sum_probs=144.6

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.+|..|.||||+
T Consensus        33 ~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~  107 (192)
T 2rfm_A           33 SYNRTPLMVACMLGMENAIDKLVENF-DKL--EDKDIEGSTALIWAVKNNRLGIAEKLLSK--GSNVNTKDFSGKTPLMW  107 (192)
T ss_dssp             TTCCCHHHHHHHHTCGGGHHHHHHHH-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTSCCHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHhc-ccc--ccccccCccHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCcHHHH
Confidence            57889999999999999999999998 433  34688899999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+..++.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..+.+|++.|+..++.+++++|
T Consensus       108 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~L  186 (192)
T 2rfm_A          108 SIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIF  186 (192)
T ss_dssp             HHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHH
Confidence            9999999999999999999 79999999999999999999999999999998 666778888999999999999999999


Q ss_pred             hc
Q 037194          213 FK  214 (215)
Q Consensus       213 l~  214 (215)
                      ++
T Consensus       187 l~  188 (192)
T 2rfm_A          187 TE  188 (192)
T ss_dssp             HH
T ss_pred             Hh
Confidence            86

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.98  E-value=9.7e-31  Score=184.52  Aligned_cols=155  Identities=24%  Similarity=0.272  Sum_probs=143.8

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .+.++|++|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.+|..|.||||+|
T Consensus        13 ~~~~~l~~A~~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A   87 (169)
T 2y1l_E           13 DLGKKLLEAARAGRDDEVRILMANG-ADV--NAEDASGWTPLHLAAFNGHLEIVEVLLKN--GADVNAVDHAGMTPLRLA   87 (169)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHH
T ss_pred             cccchHHHHHHcCCHHHHHHHHHCC-CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHH
Confidence            4568999999999999999999998 443  34688999999999999999999999999  999999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      +..++.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..++.+++++|+
T Consensus        88 ~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~  166 (169)
T 2y1l_E           88 ALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ  166 (169)
T ss_dssp             HHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHH
Confidence            999999999999999999 79999999999999999999999999999998 6677788899999999999999999998


Q ss_pred             cC
Q 037194          214 KR  215 (215)
Q Consensus       214 ~~  215 (215)
                      +.
T Consensus       167 ~~  168 (169)
T 2y1l_E          167 KL  168 (169)
T ss_dssp             TC
T ss_pred             Hc
Confidence            64

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.97  E-value=5.3e-31  Score=184.38  Aligned_cols=154  Identities=18%  Similarity=0.163  Sum_probs=142.2

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      ...++|+.|+..|+.++++.|++.+ ...  ...+..|+||||+|+. |+.+++++|++.  +.+++.++..|.||||+|
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~Ll~~~-~~~--~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A   77 (162)
T 1ihb_A            4 PWGNELASAAARGDLEQLTSLLQNN-VNV--NAQNGFGRTALQVMKL-GNPEIARRLLLR--GANPDLKDRTGFAVIHDA   77 (162)
T ss_dssp             -CHHHHHHHHHHTCHHHHHHHTTSC-CCT--TCCCTTSCCHHHHCCS-SCHHHHHHHHHT--TCCTTCCCTTSCCHHHHH
T ss_pred             hHhhHHHHHHHcCCHHHHHHHHhCC-CCc--cccCccCccHHHHHHc-CcHHHHHHHHHc--CCCCCCCCCCCCCHHHHH
Confidence            3458999999999999999999988 443  3568899999999999 999999999999  999999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC--CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE--KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      +..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+  ....+..+.+|++.|+..++.+++++|
T Consensus        78 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L  156 (162)
T 1ihb_A           78 ARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM  156 (162)
T ss_dssp             HHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence            999999999999999999 79999999999999999999999999999998  367778889999999999999999999


Q ss_pred             hcC
Q 037194          213 FKR  215 (215)
Q Consensus       213 l~~  215 (215)
                      +++
T Consensus       157 l~~  159 (162)
T 1ihb_A          157 QAN  159 (162)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            874

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.97  E-value=1.7e-30  Score=180.35  Aligned_cols=150  Identities=19%  Similarity=0.170  Sum_probs=139.3

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHH
Q 037194           56 ERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAA  135 (215)
Q Consensus        56 g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~  135 (215)
                      ..++|+.|+..|+.+.+++|++.+ ...   ..+..|.||||+|+..|+.+++++|++.  +.+++.++..|.||||+|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~g-~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~   75 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMANG-APF---TTDWLGTSPLHLAAQYGHFSTTEVLLRA--GVSRDARTKVDRTPLHMAA   75 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHT-CCC---CCCTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHH
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHcC-CCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH
Confidence            358899999999999999999998 432   2578899999999999999999999998  9999999999999999999


Q ss_pred             hcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          136 AVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       136 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      ..++.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..|+.+++++|
T Consensus        76 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           76 SEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            99999999999999999 79999999999999999999999999999998 667778889999999999999998876

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.97  E-value=2.6e-30  Score=179.86  Aligned_cols=153  Identities=18%  Similarity=0.187  Sum_probs=140.6

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHH
Q 037194           56 ERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAA  135 (215)
Q Consensus        56 g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~  135 (215)
                      +.++|+.|+..|+.+.++.|++.. +.... ..+..|.||||+ +..|+.+++++|++.  |.+++.+|..|.||||+|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~-~~~~~g~t~L~~-~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~   76 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRE-LVHPD-ALNRFGKTALQV-MMFGSTAIALELLKQ--GASPNVQDTSGTSPVHDAA   76 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTT-CCCTT-CCCTTSCCHHHH-SCTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhh-CcCcc-ccCCCCCcHHHH-HHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHH
Confidence            458999999999999999999984 33333 578889999999 999999999999999  9999999999999999999


Q ss_pred             hcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          136 AVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       136 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      ..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|++. + ....+..|.+|++.|+..|+.+++++|++
T Consensus        77 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  154 (156)
T 1bd8_A           77 RTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG  154 (156)
T ss_dssp             HTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred             HcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence            99999999999999999 799999999999999999999999999999 6 66677888899999999999999999997


Q ss_pred             C
Q 037194          215 R  215 (215)
Q Consensus       215 ~  215 (215)
                      +
T Consensus       155 ~  155 (156)
T 1bd8_A          155 H  155 (156)
T ss_dssp             T
T ss_pred             h
Confidence            5

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.97  E-value=6.9e-31  Score=184.43  Aligned_cols=156  Identities=21%  Similarity=0.234  Sum_probs=141.5

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.++|+.|+..|+.+.++.|++.+ +.... ..+..|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+
T Consensus         6 ~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~   81 (165)
T 3twr_A            6 SEADRQLLEAAKAGDVETVKKLCTVQ-SVNCR-DIEGRQSTPLHFAAGYNRVSVVEYLLQH--GADVHAKDKGGLVPLHN   81 (165)
T ss_dssp             CHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCC-CTTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred             chhhHHHHHHHHhCCHHHHHHHHHcC-CCCcc-ccccCCCCHHHHHHHcChHHHHHHHHhc--CCCCCccCCCCCCHHHH
Confidence            45679999999999999999999976 33332 4577789999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+..++.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|.. ++.+++++|
T Consensus        82 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L  159 (165)
T 3twr_A           82 ACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLL  159 (165)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHH
T ss_pred             HHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHH
Confidence            9999999999999999999 79999999999999999999999999999998 66777888889898766 788999999


Q ss_pred             hcC
Q 037194          213 FKR  215 (215)
Q Consensus       213 l~~  215 (215)
                      +++
T Consensus       160 ~~~  162 (165)
T 3twr_A          160 RGD  162 (165)
T ss_dssp             HTC
T ss_pred             hhc
Confidence            864

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.97  E-value=4.9e-30  Score=189.51  Aligned_cols=158  Identities=20%  Similarity=0.236  Sum_probs=142.9

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhh---hhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccC-----
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIIC---AAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDE-----  125 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~---~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~-----  125 (215)
                      ..|+||||+|+..|+.++++.|++.+ +....   ...+..|.||||+|+..|+.+++++|++.  +.+++..+.     
T Consensus        35 ~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~~~~~  111 (232)
T 2rfa_A           35 AMGETALHIAALYDNLEAAMVLMEAA-PELVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR--GASVSARATGSVFH  111 (232)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHHC-GGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCCSGGGS
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcC-chhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhC--CCCCCcccCCccee
Confidence            57899999999999999999999998 54422   23567899999999999999999999999  888888765     


Q ss_pred             --------CCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHH----HHHhhcCC-C------
Q 037194          126 --------NGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTA----SFLFHKSE-K------  186 (215)
Q Consensus       126 --------~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v----~~Ll~~~~-~------  186 (215)
                              .|.||||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++    ++|++.|+ .      
T Consensus       112 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~  190 (232)
T 2rfa_A          112 YRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLE  190 (232)
T ss_dssp             CCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGG
T ss_pred             ecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhh
Confidence                    799999999999999999999999999 799999999999999999999988    99999998 3      


Q ss_pred             CCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          187 ELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       187 ~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      ...+..|.+|++.|+..|+.+++++||++
T Consensus       191 ~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~  219 (232)
T 2rfa_A          191 LVPNNQGLTPFKLAGVEGNIVMFQHLMQK  219 (232)
T ss_dssp             GCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             ccCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            36788899999999999999999999874

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.97  E-value=9.4e-30  Score=186.86  Aligned_cols=157  Identities=19%  Similarity=0.185  Sum_probs=143.8

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||.|+..|+.+++++|++.+ +.... ..+..|.||||+|+..|+.+++++|++.  +.+++.+|..|.||||+
T Consensus        56 ~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~  131 (223)
T 2f8y_A           56 NMGRTPLHAAVSADAQGVFQILIRNR-ATDLD-ARMHDGTTPLILAARLAVEGMLEDLINS--HADVNAVDDLGKSALHW  131 (223)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHBT-TSCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCBCTTSCBHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcc-cCCCCCCcHHHHHHHhCcHHHHHHHHHc--CCCCcCcCCCCCcHHHH
Confidence            57889999999999999999999987 43333 5688899999999999999999999998  89999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+..++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..++.+++++|
T Consensus       132 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  210 (223)
T 2f8y_A          132 AAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL  210 (223)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHH
Confidence            9999999999999999999 79999999999999999999999999999998 667778888999999999999999999


Q ss_pred             hcC
Q 037194          213 FKR  215 (215)
Q Consensus       213 l~~  215 (215)
                      +++
T Consensus       211 ~~~  213 (223)
T 2f8y_A          211 DEY  213 (223)
T ss_dssp             HHT
T ss_pred             HHc
Confidence            864

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.97  E-value=1.7e-29  Score=185.54  Aligned_cols=157  Identities=17%  Similarity=0.201  Sum_probs=144.4

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCC-CcccccCCCchhh
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPE-DLMLQDENGNTAF  131 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~-~~~~~~~~g~t~l  131 (215)
                      ...|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +. +++..+..|.|||
T Consensus        22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~~g~t~L   96 (223)
T 2f8y_A           22 DRTGETALHLAARYSRSDAAKRLLEAS-ADA--NIQDNMGRTPLHAAVSADAQGVFQILIRN--RATDLDARMHDGTTPL   96 (223)
T ss_dssp             TTTCCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHB--TTSCTTCCCTTCCCHH
T ss_pred             CCCCCchHHHHHHcCCHHHHHHHHHcC-CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCcHH
Confidence            357889999999999999999999998 443  34688999999999999999999999998  54 8899999999999


Q ss_pred             HHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHH
Q 037194          132 CFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQ  210 (215)
Q Consensus       132 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~  210 (215)
                      |+|+..++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..+..++++
T Consensus        97 ~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~  175 (223)
T 2f8y_A           97 ILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK  175 (223)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred             HHHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHH
Confidence            999999999999999999999 79999999999999999999999999999998 6677788889999999999999999


Q ss_pred             HhhcC
Q 037194          211 DIFKR  215 (215)
Q Consensus       211 ~ll~~  215 (215)
                      +|+++
T Consensus       176 ~Ll~~  180 (223)
T 2f8y_A          176 VLLDH  180 (223)
T ss_dssp             HHHHT
T ss_pred             HHHHc
Confidence            99864

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.97  E-value=6.5e-30  Score=191.47  Aligned_cols=156  Identities=19%  Similarity=0.183  Sum_probs=121.6

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.++++.|++.+ ..... ..+..|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+
T Consensus        88 ~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~  163 (253)
T 1yyh_A           88 NMGRTPLHAAVSADAQGVFQILIRNR-ATDLD-ARMHDGTTPLILAARLAVEGMLEDLINS--HADVNAVDDLGKSALHW  163 (253)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHST-TSCTT-CCCTTCCCHHHHHHHHTCSSHHHHHHHT--TCCTTCBCTTSCBHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcc-ccCCCCCcHHHHHHHcChHHHHHHHHHc--CCCCCCcCCCCCCHHHH
Confidence            45667777777777777777777776 32222 4566777888888888887888888877  77888888888888888


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..|.++++.|+..|+.+++.+|
T Consensus       164 A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l  242 (253)
T 1yyh_A          164 AAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL  242 (253)
T ss_dssp             HHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHH
Confidence            8888888888888888888 67888888888888888888888888888887 666677778888888888888888877


Q ss_pred             hc
Q 037194          213 FK  214 (215)
Q Consensus       213 l~  214 (215)
                      .+
T Consensus       243 ~~  244 (253)
T 1yyh_A          243 DL  244 (253)
T ss_dssp             HC
T ss_pred             HH
Confidence            64

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.97  E-value=8.1e-30  Score=190.94  Aligned_cols=157  Identities=17%  Similarity=0.201  Sum_probs=145.2

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCC-CcccccCCCchhh
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPE-DLMLQDENGNTAF  131 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~-~~~~~~~~g~t~l  131 (215)
                      ...|+||||+|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +. +++.++..|.|||
T Consensus        54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~~g~t~L  128 (253)
T 1yyh_A           54 DRTGETALHLAARYSRSDAAKRLLEAS-ADA--NIQDNMGRTPLHAAVSADAQGVFQILIRN--RATDLDARMHDGTTPL  128 (253)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHS--TTSCTTCCCTTCCCHH
T ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcC-CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCccccCCCCCcHH
Confidence            467899999999999999999999998 443  35688999999999999999999999998  55 8999999999999


Q ss_pred             HHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHH
Q 037194          132 CFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQ  210 (215)
Q Consensus       132 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~  210 (215)
                      |+|+..++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..|.++++.|+..++.++++
T Consensus       129 ~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~  207 (253)
T 1yyh_A          129 ILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK  207 (253)
T ss_dssp             HHHHHHTCSSHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred             HHHHHcChHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHH
Confidence            999999999999999999999 79999999999999999999999999999999 6677788999999999999999999


Q ss_pred             HhhcC
Q 037194          211 DIFKR  215 (215)
Q Consensus       211 ~ll~~  215 (215)
                      +||++
T Consensus       208 ~Ll~~  212 (253)
T 1yyh_A          208 VLLDH  212 (253)
T ss_dssp             HHHHT
T ss_pred             HHHHc
Confidence            99864

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.97  E-value=3e-30  Score=193.46  Aligned_cols=160  Identities=18%  Similarity=0.179  Sum_probs=143.8

Q ss_pred             ccCcccHHHHHHHHc---CCHHHHHHHHhhcchhhhhh---------hcCCCCccHHHHHHhcCCHHHHHHHHHccCCCC
Q 037194           52 LCCSERLLLYKAALK---GEMKEIEGLFEKDYRSIICA---------AITEGHQTVLHVATGAKQTSFVQQLLTFMDPED  119 (215)
Q Consensus        52 ~~~~g~~~L~~a~~~---g~~~~~~~ll~~~~~~~~~~---------~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~  119 (215)
                      ....|+||||+|+..   |+.++++.|++.+ ......         ..+..|.||||+|+..|+.+++++|++.  |++
T Consensus        39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~  115 (256)
T 2etb_A           39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQID-KDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVEN--GAD  115 (256)
T ss_dssp             BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHH-HHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT--TCC
T ss_pred             CCCCCCCHHHHHHHccccchHHHHHHHHhcC-CcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHc--CCC
Confidence            346889999999999   9999999999998 443210         1236799999999999999999999999  999


Q ss_pred             cccccCC-------------CchhhHHHHhcCcHHHHHHHHH---hCCCCCCCCCCCCCCHHHHHHH--hCCHH------
Q 037194          120 LMLQDEN-------------GNTAFCFAAAVGAVDIANLMLK---KNPSLLGIRGSKNMPPLYFAAL--FGQTD------  175 (215)
Q Consensus       120 ~~~~~~~-------------g~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~l~~a~~--~g~~~------  175 (215)
                      ++.++..             |.||||+|+..|+.+++++|++   .|++ ++..|..|+||||+|+.  .++.+      
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~  194 (256)
T 2etb_A          116 VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVI  194 (256)
T ss_dssp             TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHH
T ss_pred             CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHH
Confidence            9998876             9999999999999999999999   8999 79999999999999999  78888      


Q ss_pred             -HHHHHhhcCC-C-------CCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          176 -TASFLFHKSE-K-------ELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       176 -~v~~Ll~~~~-~-------~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                       ++++|+++|+ .       ...+..|.+|++.|+..|+.+++++||++
T Consensus       195 ~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~  243 (256)
T 2etb_A          195 HMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQR  243 (256)
T ss_dssp             HHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhC
Confidence             9999999998 5       67888999999999999999999999874

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.97  E-value=2e-29  Score=182.25  Aligned_cols=157  Identities=14%  Similarity=0.165  Sum_probs=143.8

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.. +.+++..+..|.||||+
T Consensus        37 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~t~L~~  112 (201)
T 3hra_A           37 TEGNTPLNIAVHNNDIEIAKALIDRG-ADI--NLQNSISDSPYLYAGAQGRTEILAYMLKHA-TPDLNKHNRYGGNALIP  112 (201)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHS-CCCTTCCCTTSCCSHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcC-CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHhcc-CcccccccCCCCcHHHH
Confidence            47889999999999999999999998 443  347888999999999999999999999652 77999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHhCC-----HHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCch
Q 037194          134 AAAVGAVDIANLMLKKN-PSLLGIRGSKNMPPLYFAALFGQ-----TDTASFLFHKSE-KELPTEDRKVIFITSVDTGLY  206 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~t~l~~a~~~g~-----~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~  206 (215)
                      |+..++.+++++|++.+ ++ ++..+..|.||||+|+..+.     .+++++|+++|+ ....+..|.++++.|+..|+.
T Consensus       113 A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~  191 (201)
T 3hra_A          113 AAEKGHIDNVKLLLEDGRED-IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYT  191 (201)
T ss_dssp             HHHTTCHHHHHHHHHHCCCC-TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             HHHcCCHHHHHHHHHcCCCC-cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Confidence            99999999999999999 66 79999999999999999998     999999999999 777788889999999999999


Q ss_pred             hHHHHhhcC
Q 037194          207 GKYQDIFKR  215 (215)
Q Consensus       207 ~~~~~ll~~  215 (215)
                      +++++|+++
T Consensus       192 ~~~~~Ll~~  200 (201)
T 3hra_A          192 EISKILAQY  200 (201)
T ss_dssp             HHHHHHHTC
T ss_pred             hHHHHHHhc
Confidence            999999974

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.97  E-value=3.4e-30  Score=183.29  Aligned_cols=156  Identities=13%  Similarity=0.113  Sum_probs=141.5

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .+.++|+.|+..|+.+.++.|++.+ +.... ..+..|.||||+|+..|+.+++++|++.  +++++.+|..|.||||+|
T Consensus         4 ~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A   79 (179)
T 3f6q_A            4 EFMDDIFTQCREGNAVAVRLWLDNT-ENDLN-QGDDHGFSPLHWACREGRSAVVEMLIMR--GARINVMNRGDDTPLHLA   79 (179)
T ss_dssp             ---CCHHHHHHHTCHHHHHHHHHCT-TSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHH
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHhcC-ccccc-ccCCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCCHHHHH
Confidence            3457799999999999999999986 44333 5788999999999999999999999999  999999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      +..++.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..+.+|++.|+..+..+++++|+
T Consensus        80 ~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~  158 (179)
T 3f6q_A           80 ASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAE  158 (179)
T ss_dssp             HHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence            999999999999999999 79999999999999999999999999999999 7778888899999998999999999987


Q ss_pred             cC
Q 037194          214 KR  215 (215)
Q Consensus       214 ~~  215 (215)
                      ++
T Consensus       159 ~~  160 (179)
T 3f6q_A          159 KM  160 (179)
T ss_dssp             HT
T ss_pred             Hh
Confidence            63

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.97  E-value=1.8e-29  Score=186.25  Aligned_cols=156  Identities=17%  Similarity=0.184  Sum_probs=119.8

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.++..|.||||+
T Consensus        38 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~  112 (231)
T 3aji_A           38 QDSRTALHWACSAGHTEIVEFLLQLG-VPV--NDKDDAGWSPLHIAASAGXDEIVKALLVK--GAHVNAVNQNGCTPLHY  112 (231)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTT-CCS--CCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred             CCCCCHHHHHHHcCcHHHHHHHHHhC-CCC--CCcCCCCCCHHHHHHHcCHHHHHHHHHHc--CCCCCCCCCCCCCHHHH
Confidence            46678888888888888888888876 332  23567778888888888888888888887  77777777788888888


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+..++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..++.+++++|
T Consensus       113 A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  191 (231)
T 3aji_A          113 AASKNRHEIAVMLLEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFL  191 (231)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHH
Confidence            8888888888888888777 67777778888888888888888888888777 555666677777777777788888777


Q ss_pred             hcC
Q 037194          213 FKR  215 (215)
Q Consensus       213 l~~  215 (215)
                      +++
T Consensus       192 l~~  194 (231)
T 3aji_A          192 VTQ  194 (231)
T ss_dssp             HHT
T ss_pred             HHC
Confidence            753

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.97  E-value=1e-29  Score=179.17  Aligned_cols=126  Identities=23%  Similarity=0.310  Sum_probs=118.3

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+|||++|+..++.++++.|++.+ ...  ..++..|+||||+|+..|+.+++++|++.  |++++.+|..|+||||+
T Consensus        35 ~~g~t~l~~a~~~~~~~~~~~ll~~g-ad~--~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~--gadvn~~d~~G~TpLh~  109 (169)
T 4gpm_A           35 SDGRTPLHHAAENGHKEVVKLLISKG-ADV--NAKDSDGRTPLHHAAENGHKEVVKLLISK--GADVNAKDSDGRTPLHH  109 (169)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcc-cch--hhhccCCCCHHHHHHHcCCHHHHHHHHHC--cCCCCCCCCCCCCHHHH
Confidence            58899999999999999999999998 444  35788999999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |+..|+.+++++|++.|++ ++..|..|+||||+|+..|+.+++++|+++|+
T Consensus       110 A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA  160 (169)
T 4gpm_A          110 AAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG  160 (169)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred             HHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence            9999999999999999999 79999999999999999999999999999998

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.97  E-value=2.6e-29  Score=185.59  Aligned_cols=154  Identities=16%  Similarity=0.144  Sum_probs=137.3

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhh-cchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCc-----ccccCCCc
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEK-DYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDL-----MLQDENGN  128 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~-~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~-----~~~~~~g~  128 (215)
                      .|+||||.|+..|+.++++.|++. + .. . ...+..|+||||+|+..|+.+++++|++.  +.++     +..|..|.
T Consensus         2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g-~~-~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~~~~~g~   76 (232)
T 2rfa_A            2 IWESPLLLAAKENDVQALSKLLKFEG-CE-V-HQRGAMGETALHIAALYDNLEAAMVLMEA--APELVFEPMTSELYEGQ   76 (232)
T ss_dssp             CTTCHHHHHHHTTCHHHHHHHHTTTC-SC-T-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH--CGGGGGCCCCSTTTTTC
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHhcC-CC-c-ccCCCCCCCHHHHHHHcCCHHHHHHHHHc--CchhccccccccCCCCc
Confidence            477999999999999999999998 5 33 2 35788999999999999999999999999  7765     66788999


Q ss_pred             hhhHHHHhcCcHHHHHHHHHhCCCCCCCCCC-------------CCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCc
Q 037194          129 TAFCFAAAVGAVDIANLMLKKNPSLLGIRGS-------------KNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRK  194 (215)
Q Consensus       129 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-------------~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~  194 (215)
                      ||||+|+..|+.+++++|++.|++ ++..+.             .|.||||+|+..|+.+++++|+++|+ ....+..|.
T Consensus        77 t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~  155 (232)
T 2rfa_A           77 TALHIAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGN  155 (232)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             CHHHHHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence            999999999999999999999998 566654             79999999999999999999999998 677788899


Q ss_pred             hHHHHHHhcCchhHH----HHhhc
Q 037194          195 VIFITSVDTGLYGKY----QDIFK  214 (215)
Q Consensus       195 ~~~~~a~~~~~~~~~----~~ll~  214 (215)
                      +++|.|+..++.+++    ++|++
T Consensus       156 t~L~~A~~~~~~~~~~~i~~~Ll~  179 (232)
T 2rfa_A          156 TVLHILILQPNKTFACQMYNLLLS  179 (232)
T ss_dssp             CHHHHHHTCSCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHcCChHHHHHHHHHHHh
Confidence            999999999999988    77664

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.97  E-value=1.8e-29  Score=191.38  Aligned_cols=158  Identities=15%  Similarity=0.118  Sum_probs=138.8

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCC----------------
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDP----------------  117 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~----------------  117 (215)
                      ..|+||||+|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++....                
T Consensus        43 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~--~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~  119 (282)
T 1oy3_D           43 DLGQTALHLAAILGEASTVEKLYAAG-AGV--LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDC  119 (282)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTT-CCS--SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcC-CCC--CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhccccc
Confidence            57889999999999999999999998 443  24688899999999999999999999986211                


Q ss_pred             -----------------------------CCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCC-CCCCHHHH
Q 037194          118 -----------------------------EDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGS-KNMPPLYF  167 (215)
Q Consensus       118 -----------------------------~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~  167 (215)
                                                   .+++.++..|.||||+|+..|+.+++++|++.|++ ++..+. .|.||||+
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~  198 (282)
T 1oy3_D          120 TPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHL  198 (282)
T ss_dssp             ------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHH
T ss_pred             CcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHH
Confidence                                         23677788999999999999999999999999999 677775 49999999


Q ss_pred             HHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          168 AALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       168 a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      |+..|+.+++++|+++|+ ....+..|.||++.|+..++.+++++|+++
T Consensus       199 A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  247 (282)
T 1oy3_D          199 AVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH  247 (282)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT
T ss_pred             HHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHc
Confidence            999999999999999998 777788899999999999999999999864

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.97  E-value=8.2e-30  Score=193.34  Aligned_cols=158  Identities=15%  Similarity=0.210  Sum_probs=144.8

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHH-----hcCCHHHHHHHHHccCCCCcccccCCC
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVAT-----GAKQTSFVQQLLTFMDPEDLMLQDENG  127 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~-----~~g~~~~v~~Ll~~~~~~~~~~~~~~g  127 (215)
                      ...|+||||+|+..|+.++++.|++.+ ..... ..+..|.||||+|+     ..++.+++++|++.  +.+.+..+..|
T Consensus       108 d~~g~T~Lh~A~~~g~~~~v~~Ll~~g-~~~~~-~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~--g~~~~~~~~~g  183 (276)
T 4hbd_A          108 DSNGNTALHYSVSHANFPVVQQLLDSG-VCKVD-KQNRAGYSPIMLTALATLKTQDDIETVLQLFRL--GNINAKASQAG  183 (276)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHTS-CCCTT-CCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHH--SCTTCCCTTTC
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCC-CCcCC-CCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHc--CCCccccCCCC
Confidence            357899999999999999999999998 52333 57889999999999     66889999999999  88888889999


Q ss_pred             chhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhh-cCC-CCCCCCCCchHHHHHHhcCc
Q 037194          128 NTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFH-KSE-KELPTEDRKVIFITSVDTGL  205 (215)
Q Consensus       128 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~-~~~-~~~~~~~~~~~~~~a~~~~~  205 (215)
                      +||||+|+..|+.+++++|++.|++ ++..|..|+||||+|+..|+.+++++|++ .|+ ....+..|.||++.|+..|+
T Consensus       184 ~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~  262 (276)
T 4hbd_A          184 QTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ  262 (276)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             CCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC
Confidence            9999999999999999999999999 79999999999999999999999999999 777 67788889999999999999


Q ss_pred             hhHHHHhhcC
Q 037194          206 YGKYQDIFKR  215 (215)
Q Consensus       206 ~~~~~~ll~~  215 (215)
                      .+++++||+|
T Consensus       263 ~~iv~~Ll~~  272 (276)
T 4hbd_A          263 SEIASMLYSR  272 (276)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            9999999864

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.97  E-value=3.7e-30  Score=193.37  Aligned_cols=158  Identities=22%  Similarity=0.230  Sum_probs=141.2

Q ss_pred             CcccHHHHHHH---HcCCHHHHHHHHhhcchhhhh---------hhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcc
Q 037194           54 CSERLLLYKAA---LKGEMKEIEGLFEKDYRSIIC---------AAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLM  121 (215)
Q Consensus        54 ~~g~~~L~~a~---~~g~~~~~~~ll~~~~~~~~~---------~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~  121 (215)
                      ..|+||||+|+   ..|+.++++.|++.+ .....         ...+..|+||||+|+..|+.+++++|++.  |++++
T Consensus        44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~  120 (260)
T 3jxi_A           44 STGKTCLPKALLNLSAGRNDTIPILLDIA-EKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEK--GADVH  120 (260)
T ss_dssp             TTCCCHHHHHHTSCBTTBCTHHHHHHHHH-HHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHT--TCCTT
T ss_pred             CCCCcHHHHHHHHhhcCCHHHHHHHHHhc-ccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhC--CCCcC
Confidence            56899999999   679999999999987 43211         12234799999999999999999999999  99999


Q ss_pred             ccc--------------CCCchhhHHHHhcCcHHHHHHHHH---hCCCCCCCCCCCCCCHHHHHHHhCC---------HH
Q 037194          122 LQD--------------ENGNTAFCFAAAVGAVDIANLMLK---KNPSLLGIRGSKNMPPLYFAALFGQ---------TD  175 (215)
Q Consensus       122 ~~~--------------~~g~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~l~~a~~~g~---------~~  175 (215)
                      .++              ..|.||||+|+..|+.+++++|++   .|++ ++..|..|+||||+|+..++         .+
T Consensus       121 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~  199 (260)
T 3jxi_A          121 AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTK  199 (260)
T ss_dssp             CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHH
T ss_pred             ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHH
Confidence            988              689999999999999999999999   8999 79999999999999999888         79


Q ss_pred             HHHHHhhcCC-C-------CCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          176 TASFLFHKSE-K-------ELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       176 ~v~~Ll~~~~-~-------~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      ++++|+++|+ .       ...+..|.||++.|+..|+.+++++||+|
T Consensus       200 ~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~  247 (260)
T 3jxi_A          200 MYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRR  247 (260)
T ss_dssp             HHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            9999999998 3       56888999999999999999999999975

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.97  E-value=4.6e-29  Score=183.68  Aligned_cols=160  Identities=15%  Similarity=0.087  Sum_probs=142.4

Q ss_pred             ccCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhh-cCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchh
Q 037194           52 LCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAA-ITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTA  130 (215)
Q Consensus        52 ~~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~-~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~  130 (215)
                      ....|+||||+|+..|+.+++++|++.+ +...... .+..|.||||+|+..|+.+++++|++.+.+.+++.++..|.||
T Consensus        32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~  110 (228)
T 2dzn_A           32 KDQDGRIPLHWSVSFQAHEITSFLLSKM-ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTC  110 (228)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTC-TTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCH
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHhcc-ccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCH
Confidence            3457889999999999999999999987 4333323 6788999999999999999999999982228889999999999


Q ss_pred             hHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcC-C-CCCCCCCCchHHHHHHhcCchhH
Q 037194          131 FCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKS-E-KELPTEDRKVIFITSVDTGLYGK  208 (215)
Q Consensus       131 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~-~-~~~~~~~~~~~~~~a~~~~~~~~  208 (215)
                      ||+|+..++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|++.| + ....+..|.++++.|+..++.++
T Consensus       111 L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~  189 (228)
T 2dzn_A          111 LHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDA  189 (228)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred             HHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHH
Confidence            9999999999999999999999 7999999999999999999999999999999 5 66677888899999999999999


Q ss_pred             HHHhh
Q 037194          209 YQDIF  213 (215)
Q Consensus       209 ~~~ll  213 (215)
                      +++||
T Consensus       190 v~~Ll  194 (228)
T 2dzn_A          190 AVLLV  194 (228)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99998

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.97  E-value=2.8e-29  Score=190.32  Aligned_cols=159  Identities=18%  Similarity=0.169  Sum_probs=140.6

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhh-hhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSII-CAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~-~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      ..|+||||+|+..|+.+++++|++.+ .... ....+..|+||||+|+..|+.+++++|++.  |++++.++..|+||||
T Consensus         7 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~tpL~   83 (282)
T 1oy3_D            7 EDGDTALHLAVIHQHEPFLDFLLGFS-AGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA--GAGVLVAERGGHTALH   83 (282)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHHH-TTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTSCCHHH
T ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhcC-CCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHH
Confidence            57889999999999999999999987 4421 235788999999999999999999999999  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCC----------------------------------------------CCCCCCCCCCHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSL----------------------------------------------LGIRGSKNMPPLY  166 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~----------------------------------------------~~~~~~~g~t~l~  166 (215)
                      +|+..++.+++++|++.++..                                              ++..+..|.||||
T Consensus        84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~  163 (282)
T 1oy3_D           84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH  163 (282)
T ss_dssp             HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred             HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence            999999999999999977541                                              3567788999999


Q ss_pred             HHHHhCCHHHHHHHhhcCC-CCCCC-CCCchHHHHHHhcCchhHHHHhhcC
Q 037194          167 FAALFGQTDTASFLFHKSE-KELPT-EDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       167 ~a~~~g~~~~v~~Ll~~~~-~~~~~-~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      +|+..|+.+++++|+++|+ ....+ ..+.+++|.|+..|+.+++++||++
T Consensus       164 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~  214 (282)
T 1oy3_D          164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA  214 (282)
T ss_dssp             HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence            9999999999999999998 44443 4588999999999999999999864

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.96  E-value=8.7e-29  Score=182.19  Aligned_cols=157  Identities=16%  Similarity=0.223  Sum_probs=140.9

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCccc-ccCCCchhhHHH
Q 037194           56 ERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLML-QDENGNTAFCFA  134 (215)
Q Consensus        56 g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~-~~~~g~t~l~~a  134 (215)
                      |.||||.|+..|+.+.++.|++.+ +.... ..+..|.||||+|+..|+.+++++|++.+...+++. .+..|+||||+|
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A   79 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSK-PSLLL-QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA   79 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHC-GGGTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcC-ccccc-cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence            679999999999999999999998 55443 478899999999999999999999999922266666 788999999999


Q ss_pred             HhcCcHHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHH
Q 037194          135 AAVGAVDIANLMLKKN--PSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQD  211 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~--~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~  211 (215)
                      +..|+.+++++|++.|  ++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..|..+++++
T Consensus        80 ~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~  158 (228)
T 2dzn_A           80 CSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIEL  158 (228)
T ss_dssp             HHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             HHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence            9999999999999998  77 78889999999999999999999999999998 66777888999999999999999999


Q ss_pred             hhcC
Q 037194          212 IFKR  215 (215)
Q Consensus       212 ll~~  215 (215)
                      |+++
T Consensus       159 Ll~~  162 (228)
T 2dzn_A          159 LCGL  162 (228)
T ss_dssp             HHTT
T ss_pred             HHhc
Confidence            9863

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.96  E-value=5e-30  Score=193.77  Aligned_cols=146  Identities=18%  Similarity=0.185  Sum_probs=134.9

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.++++.|++.+ ...  ...+..|.||+|+|+..++.+++++|++.  +++++.+|..|+||||+
T Consensus        84 ~~G~TpLh~A~~~g~~~~v~~Ll~~~-a~~--~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~--g~~~n~~d~~g~TpL~~  158 (269)
T 4b93_B           84 QDGSSPLHVAALHGRADLIPLLLKHG-ANA--GARNADQAVPLHLACQQGHFQVVKCLLDS--NAKPNKKDLSGNTPLIY  158 (269)
T ss_dssp             TTSCCHHHHHHHTTCTTHHHHHHHTT-CCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTCCCHHHH
T ss_pred             CCCCCHHHHHHHcCcHHHHHHHHhcC-CCc--CccCCCCCCccccccccChHHHHHHHHHC--CCCCCCCCCCCCCHHHH
Confidence            57899999999999999999999998 443  34688899999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCc
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGL  205 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~  205 (215)
                      |+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.++|++|+++|+ ....+..|.||++.|+..+.
T Consensus       159 A~~~g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~  230 (269)
T 4b93_B          159 ACSGGHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK  230 (269)
T ss_dssp             HHHTTCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred             HHHCCCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence            9999999999999999999 79999999999999999999999999999999 77778888889998877663

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.96  E-value=1e-28  Score=188.17  Aligned_cols=155  Identities=19%  Similarity=0.186  Sum_probs=91.4

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      ...|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +++++.+|..|.||||
T Consensus        56 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~t~L~  130 (285)
T 3d9h_A           56 AVSDWSPMHEAAIHGHQLSLRNLISQG-WAV--NIITADHVSPLHEACLGGHLSCVKILLKH--GAQVNGVTADWHTPLF  130 (285)
T ss_dssp             SCCSCCHHHHHHHTTCHHHHHHHHHTT-CCS--CEECTTCCCHHHHHHHTTCHHHHHHHHHT--TCCSSCCCTTCCCHHH
T ss_pred             CccCCCHHHHHHHcCCHHHHHHHHHCC-CCC--CCcCCCCCCHHHHHHHCCcHHHHHHHHHC--CCCCCCCCCCCCCHHH
Confidence            345566666666666666666666665 222  23455666666666666666666666666  6666666666666666


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQD  211 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~  211 (215)
                      +|+..|+.+++++|++.|++ ++.. ..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..++.+++++
T Consensus       131 ~A~~~~~~~~v~~Ll~~g~~-~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~  208 (285)
T 3d9h_A          131 NACVSGSWDCVNLLLQHGAS-VQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK  208 (285)
T ss_dssp             HHHHHTCHHHHHHHHHTTCC-SSCS-CTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred             HHHHcCHHHHHHHHHHCCCC-CCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence            66666666666666666555 3332 235556666655555555555555555 44444455555555555555555555


Q ss_pred             hhc
Q 037194          212 IFK  214 (215)
Q Consensus       212 ll~  214 (215)
                      ||+
T Consensus       209 Ll~  211 (285)
T 3d9h_A          209 LLE  211 (285)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            553

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.96  E-value=1.7e-28  Score=181.09  Aligned_cols=156  Identities=19%  Similarity=0.254  Sum_probs=143.9

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .+.++|+.|+..|+.+.++.++..+ +.... ..+..|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|
T Consensus         5 ~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A   80 (231)
T 3aji_A            5 VSNIMICNLAYSGKLDELKERILAD-KSLAT-RTDQDSRTALHWACSAGHTEIVEFLLQL--GVPVNDKDDAGWSPLHIA   80 (231)
T ss_dssp             CSSSHHHHHHHHTCHHHHHHHHHHC-GGGGG-CCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHH
T ss_pred             cccchHHHHHHhCCHHHHHHHHHhc-hhhhh-cCCCCCCCHHHHHHHcCcHHHHHHHHHh--CCCCCCcCCCCCCHHHHH
Confidence            4568999999999999999999988 55443 5788999999999999999999999999  999999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      +..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..|..+++++|+
T Consensus        81 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  159 (231)
T 3aji_A           81 ASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILL  159 (231)
T ss_dssp             HHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             HHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence            999999999999999999 79999999999999999999999999999998 6667778889999999999999999998


Q ss_pred             cC
Q 037194          214 KR  215 (215)
Q Consensus       214 ~~  215 (215)
                      ++
T Consensus       160 ~~  161 (231)
T 3aji_A          160 FY  161 (231)
T ss_dssp             HT
T ss_pred             hc
Confidence            63

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.96  E-value=1.5e-29  Score=187.46  Aligned_cols=156  Identities=16%  Similarity=0.076  Sum_probs=142.0

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCC------cccccCCC
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED------LMLQDENG  127 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~------~~~~~~~g  127 (215)
                      ..|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+      ++..+..|
T Consensus        43 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~~~~~~~g  117 (236)
T 1ikn_D           43 NLQQTPLHLAVITNQPEIAEALLGAG-CDP--ELRDFRGNTPLHLACEQGCLASVGVLTQS--CTTPHLHSILKATNYNG  117 (236)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHCCCSCC-CCS--CCCCTTCCCHHHHHHHHTCHHHHHHHHHS--TTTTSSSCGGGCCCTTC
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcC-CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHhc--ccchhHHHHhhccCCCC
Confidence            56889999999999999999999998 443  34688999999999999999999999998  543      57778899


Q ss_pred             chhhHHHHhcCcHHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCc
Q 037194          128 NTAFCFAAAVGAVDIANLMLKKNPSLLGIRGS-KNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGL  205 (215)
Q Consensus       128 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~  205 (215)
                      .||||+|+..|+.+++++|++.|++ ++..+. .|.||||+|+..|+.+++++|+++|+ ....+..|.+|++.|+..++
T Consensus       118 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~  196 (236)
T 1ikn_D          118 HTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS  196 (236)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCc
Confidence            9999999999999999999999999 788887 99999999999999999999999999 77777888999999999999


Q ss_pred             hhHHHHhhcC
Q 037194          206 YGKYQDIFKR  215 (215)
Q Consensus       206 ~~~~~~ll~~  215 (215)
                      .+++++|+++
T Consensus       197 ~~~~~~Ll~~  206 (236)
T 1ikn_D          197 TRIQQQLGQL  206 (236)
T ss_dssp             HHHHHHHHTT
T ss_pred             hHHHHHHHHc
Confidence            9999999864

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.96  E-value=2.5e-29  Score=191.53  Aligned_cols=153  Identities=18%  Similarity=0.197  Sum_probs=113.0

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.++++.|++.+ ....    ..+|.||||+|+..|+.+++++|++.  |++++.+|..|+||||+
T Consensus        29 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~  101 (285)
T 3kea_A           29 VHGHSASYYAIADNNVRLVCTLLNAG-ALKN----LLENEFPLHQAATLEDTKIVKILLFS--GLDDSQFDDKGNTALYY  101 (285)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHTT-GGGS----CCTTCCHHHHHTTSSSCHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCC-CCCC----CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCcHHHH
Confidence            46778888888888888888888877 3322    12477888888888888888888877  77777777778888888


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCC-CCHHHHHHHhCCHHHHHHHhhcCCCCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKN-MPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g-~t~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+..|+.+++++|++.|++ ++..+..| .||||+|+..|+.+++++|+++|+...+...+.+++|.|+..|+.+++++|
T Consensus       102 A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~L  180 (285)
T 3kea_A          102 AVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILL  180 (285)
T ss_dssp             HHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHH
Confidence            8888888888888888777 67777777 678888777777777777777776333333567777777777777777777


Q ss_pred             hc
Q 037194          213 FK  214 (215)
Q Consensus       213 l~  214 (215)
                      |+
T Consensus       181 l~  182 (285)
T 3kea_A          181 LD  182 (285)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.96  E-value=6.3e-29  Score=188.01  Aligned_cols=160  Identities=19%  Similarity=0.210  Sum_probs=142.2

Q ss_pred             ccCcccHHHHHHHHc---CCHHHHHHHHhhcchhh------hhh---hcCCCCccHHHHHHhcCCHHHHHHHHHccCCCC
Q 037194           52 LCCSERLLLYKAALK---GEMKEIEGLFEKDYRSI------ICA---AITEGHQTVLHVATGAKQTSFVQQLLTFMDPED  119 (215)
Q Consensus        52 ~~~~g~~~L~~a~~~---g~~~~~~~ll~~~~~~~------~~~---~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~  119 (215)
                      ....|+||||+|+..   |+.++++.|++.+ ...      ...   ..+..|.||||+|+..|+.+++++|++.  |++
T Consensus        50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g-a~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~--ga~  126 (273)
T 2pnn_A           50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVA-RKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN--GAD  126 (273)
T ss_dssp             CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHH-HHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT--TCC
T ss_pred             cCcCCCCHHHHHHHHHhcCChHHHHHHHHhh-ccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC--CCC
Confidence            346889999999987   9999999999997 432      110   1356899999999999999999999999  999


Q ss_pred             cccccC--------------CCchhhHHHHhcCcHHHHHHHHH---hCCCCCCCCCCCCCCHHHHHHHhCC---------
Q 037194          120 LMLQDE--------------NGNTAFCFAAAVGAVDIANLMLK---KNPSLLGIRGSKNMPPLYFAALFGQ---------  173 (215)
Q Consensus       120 ~~~~~~--------------~g~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~l~~a~~~g~---------  173 (215)
                      ++.++.              .|.||||+|+..|+.+++++|++   .|++ ++..|..|+||||+|+..|+         
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~  205 (273)
T 2pnn_A          127 VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFV  205 (273)
T ss_dssp             TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHH
T ss_pred             cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHH
Confidence            999887              79999999999999999999999   8999 79999999999999999998         


Q ss_pred             HHHHHHHhhcCC-C-------CCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          174 TDTASFLFHKSE-K-------ELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       174 ~~~v~~Ll~~~~-~-------~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      .+++++|+++|+ .       ...+..|.|+++.|+..|+.+++++||++
T Consensus       206 ~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~  255 (273)
T 2pnn_A          206 TSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQR  255 (273)
T ss_dssp             HHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHC
Confidence            899999999998 3       25788899999999999999999999863

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.96  E-value=2e-28  Score=181.38  Aligned_cols=156  Identities=22%  Similarity=0.240  Sum_probs=140.8

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCC-CCcccccCCCchhhH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDP-EDLMLQDENGNTAFC  132 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~-~~~~~~~~~g~t~l~  132 (215)
                      ..|.||||.|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  + .+++..+..|.||||
T Consensus        42 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--~~~~~~~~~~~g~t~L~  116 (237)
T 3b7b_A           42 EDQRTPLMEAAENNHLEAVKYLIKAG-ALV--DPKDAEGSTCLHLAAKKGHYEVVQYLLSN--GQMDVNCQDDGGWTPMI  116 (237)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHTTT-CCC--CCCCTTSCCHHHHHHHTTCHHHHHHHHTT--TCCCTTCCCTTSCCHHH
T ss_pred             CCCCCHHHHHHHhCCHHHHHHHHhCC-CCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHhC--CCCCcccCCCCCCCHHH
Confidence            57889999999999999999999988 333  24678899999999999999999999998  5 788999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQD  211 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~  211 (215)
                      +|+..++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|++.|+ ....+..+.++++.|+..+..+++++
T Consensus       117 ~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~  195 (237)
T 3b7b_A          117 WATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVL  195 (237)
T ss_dssp             HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHH
Confidence            99999999999999999999 78899999999999999999999999999998 66677788889999999999999999


Q ss_pred             hhcC
Q 037194          212 IFKR  215 (215)
Q Consensus       212 ll~~  215 (215)
                      |+++
T Consensus       196 Ll~~  199 (237)
T 3b7b_A          196 FLSR  199 (237)
T ss_dssp             HHTT
T ss_pred             HHHc
Confidence            9864

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.96  E-value=2e-28  Score=181.39  Aligned_cols=156  Identities=21%  Similarity=0.215  Sum_probs=140.0

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.+|||.|+..|+.+++++|++.+ +.... ..+..|.||||+|+..|+.+++++|++.  +.+++.++..|.||||+
T Consensus        75 ~~g~t~L~~A~~~~~~~~~~~Ll~~~-~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~  150 (237)
T 3b7b_A           75 AEGSTCLHLAAKKGHYEVVQYLLSNG-QMDVN-CQDDGGWTPMIWATEYKHVDLVKLLLSK--GSDINIRDNEENICLHW  150 (237)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHTTT-CCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCC-CCCcc-cCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCCCCHHHH
Confidence            56789999999999999999999987 44433 4678899999999999999999999998  89999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..|.+|++.|+..++.+.+.+|
T Consensus       151 A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l  229 (237)
T 3b7b_A          151 AAFSGCVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQM  229 (237)
T ss_dssp             HHHHCCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHH
T ss_pred             HHHCCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999 78899999999999999999999999999998 777788899999999999988877777


Q ss_pred             hc
Q 037194          213 FK  214 (215)
Q Consensus       213 l~  214 (215)
                      ++
T Consensus       230 ~~  231 (237)
T 3b7b_A          230 SK  231 (237)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.96  E-value=2.4e-28  Score=181.18  Aligned_cols=156  Identities=16%  Similarity=0.173  Sum_probs=127.3

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCC----CcccccCCCch
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPE----DLMLQDENGNT  129 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~----~~~~~~~~g~t  129 (215)
                      ..|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.    +++..+..|.|
T Consensus        44 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~--~~~~~~~~~~~~~~g~t  118 (241)
T 1k1a_A           44 NLRQTPLHLAVITTLPSVVRLLVTAG-ASP--MALDRHGQTAAHLACEHRSPTCLRALLDS--AAPGTLDLEARNYDGLT  118 (241)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHH--SCTTSCCTTCCCTTSCC
T ss_pred             ccCCCHHHHHHHcCCHHHHHHHHHcC-CCc--cccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccccccCcCCCc
Confidence            46778899999888888888888887 333  24577888888888888888888888887  44    77778888888


Q ss_pred             hhHHHHhcCcHHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchh
Q 037194          130 AFCFAAAVGAVDIANLMLKKNPSLLGIRG-SKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYG  207 (215)
Q Consensus       130 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~  207 (215)
                      |||+|+..++.+++++|++.|++ ++..+ ..|.||||+|+..|+.+++++|+++|+ ....+..+.++++.|+..+..+
T Consensus       119 ~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~  197 (241)
T 1k1a_A          119 ALHVAVNTECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLP  197 (241)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence            88888888888888888888888 56666 678888888888888888888888887 5566677788888888888888


Q ss_pred             HHHHhhcC
Q 037194          208 KYQDIFKR  215 (215)
Q Consensus       208 ~~~~ll~~  215 (215)
                      ++++||++
T Consensus       198 ~v~~Ll~~  205 (241)
T 1k1a_A          198 LVRTLVRS  205 (241)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhc
Confidence            88888763

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.96  E-value=2.6e-28  Score=186.65  Aligned_cols=155  Identities=19%  Similarity=0.214  Sum_probs=128.9

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .|.++|+.|+..|+.+.++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  |++++.+|..|+||||+|
T Consensus        39 ~~~t~l~~A~~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A  113 (299)
T 1s70_B           39 DDGAVFLAACSSGDTEEVLRLLERG-ADI--NYANVDGLTALHQACIDDNVDMVKFLVEN--GANINQPDNEGWIPLHAA  113 (299)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHHC-CCT--TCBCTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHcC-CCC--cccCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCcHHHHH
Confidence            5568888888888888888888887 433  24677888888888888888888888888  888888888888888888


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCC--------------------------------------------------------
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRG--------------------------------------------------------  158 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~--------------------------------------------------------  158 (215)
                      +..|+.+++++|++.|++ ++..+                                                        
T Consensus       114 ~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  192 (299)
T 1s70_B          114 ASCGYLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIND  192 (299)
T ss_dssp             HHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcch
Confidence            888888888888888876 44433                                                        


Q ss_pred             ----CCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          159 ----SKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       159 ----~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                          ..|.||||+|+..|+.+++++|+++|+ ....+..|.||+|.|+..|+.+++++||++
T Consensus       193 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  254 (299)
T 1s70_B          193 VRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN  254 (299)
T ss_dssp             CCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             hhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHc
Confidence                357788999999999999999999998 667778888999999999999999999864

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.96  E-value=3e-28  Score=176.10  Aligned_cols=157  Identities=18%  Similarity=0.218  Sum_probs=140.2

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .+.++|+.|+..|+.+.++.++..+ +.... ..+..|.||||+|+..|+.+++++|++.  |++++.++..|.||||+|
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A   79 (201)
T 3hra_A            4 YEVGALLEAANQRDTKKVKEILQDT-TYQVD-EVDTEGNTPLNIAVHNNDIEIAKALIDR--GADINLQNSISDSPYLYA   79 (201)
T ss_dssp             CCTTHHHHHHHTTCHHHHHHHHTCT-TCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHH
T ss_pred             ccccHHHHHHHhccHHHHHHHHHcC-CCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHH
Confidence            4568999999999999999999988 43333 4688999999999999999999999999  999999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcC-C-CCCCCCCCchHHHHHHhcCc-----hh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKS-E-KELPTEDRKVIFITSVDTGL-----YG  207 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~-~-~~~~~~~~~~~~~~a~~~~~-----~~  207 (215)
                      +..|+.+++++|++.+...++..+..|.||||+|+..|+.+++++|++++ + ....+..+.+++|.|+..+.     .+
T Consensus        80 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~  159 (201)
T 3hra_A           80 GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQD  159 (201)
T ss_dssp             HHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHH
T ss_pred             HHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHH
Confidence            99999999999996555337899999999999999999999999999999 4 66677788889998888877     89


Q ss_pred             HHHHhhcC
Q 037194          208 KYQDIFKR  215 (215)
Q Consensus       208 ~~~~ll~~  215 (215)
                      ++++|+++
T Consensus       160 ~v~~Ll~~  167 (201)
T 3hra_A          160 IVKLLMEN  167 (201)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            99999864

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.96  E-value=4.6e-28  Score=179.70  Aligned_cols=158  Identities=18%  Similarity=0.171  Sum_probs=140.1

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcc--hhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhh
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDY--RSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAF  131 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~--~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l  131 (215)
                      ..|+|+||+|+..|+.+++++|++...  .... ...+..|.||||+|+..|+.+++++|++.  |.+++.++..|.|||
T Consensus         7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l   83 (241)
T 1k1a_A            7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTA--GASPMALDRHGQTAA   83 (241)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHH
T ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHH
Confidence            578899999999999999999998310  1122 24678899999999999999999999999  999999999999999


Q ss_pred             HHHHhcCcHHHHHHHHHhCC----CCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCC-CCCchHHHHHHhcCc
Q 037194          132 CFAAAVGAVDIANLMLKKNP----SLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPT-EDRKVIFITSVDTGL  205 (215)
Q Consensus       132 ~~a~~~~~~~~~~~Ll~~~~----~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~-~~~~~~~~~a~~~~~  205 (215)
                      |+|+..++.+++++|++.++    + ++..+..|.||||+|+..|+.+++++|++.|+ ....+ ..+.++++.|+..+.
T Consensus        84 ~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~  162 (241)
T 1k1a_A           84 HLACEHRSPTCLRALLDSAAPGTLD-LEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS  162 (241)
T ss_dssp             HHHHHTTCHHHHHHHHHHSCTTSCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred             HHHHHcCCHHHHHHHHHcCCCcccc-ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence            99999999999999999987    5 68888999999999999999999999999998 44444 678899999999999


Q ss_pred             hhHHHHhhcC
Q 037194          206 YGKYQDIFKR  215 (215)
Q Consensus       206 ~~~~~~ll~~  215 (215)
                      .+++++|+++
T Consensus       163 ~~~v~~Ll~~  172 (241)
T 1k1a_A          163 LSMVQLLLQH  172 (241)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHc
Confidence            9999999864

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.96  E-value=3.3e-28  Score=195.43  Aligned_cols=155  Identities=22%  Similarity=0.247  Sum_probs=116.2

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.||||.|+..|+.+++++|++.+ ...  ..++..|.||||+|+..|+.+++++|++.  +++++..+..|.||||+
T Consensus        45 ~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~t~L~~  119 (437)
T 1n11_A           45 VKVETPLHMAARAGHTEVAKYLLQNK-AKV--NAKAKDDQTPLHCAARIGHTNMVKLLLEN--NANPNLATTAGHTPLHI  119 (437)
T ss_dssp             SCCCCHHHHHHHHTCHHHHHHHHHHT-CCS--SCCCTTSCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTCCCHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhCC-CCC--CCCCCCCCCHHHHHHHCCCHHHHHHHHhC--CCCCCCCCCCCCcHHHH
Confidence            45677777777777777777777776 332  23566777788888887887888877777  77777777777788888


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+..|+.+++++|++.+++ ....+..|.||||+|+..|+.+++++|+++++ ....+..+.++++.|+..++.+++++|
T Consensus       120 A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  198 (437)
T 1n11_A          120 AAREGHVETVLALLEKEAS-QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL  198 (437)
T ss_dssp             HHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHhCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence            8777777777777777777 56667777788888888888888888887777 555566677777777777778888777


Q ss_pred             hc
Q 037194          213 FK  214 (215)
Q Consensus       213 l~  214 (215)
                      ++
T Consensus       199 l~  200 (437)
T 1n11_A          199 LP  200 (437)
T ss_dssp             GG
T ss_pred             Hh
Confidence            75

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.96  E-value=5e-29  Score=185.22  Aligned_cols=153  Identities=15%  Similarity=0.131  Sum_probs=110.2

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .|.|||+.|+..|+.+.++.|++.| ....   .+..|.||||+|+..|+.+++++|++.  +.+++.+|..|.||||+|
T Consensus         4 ~g~t~L~~a~~~~~~~~~~~ll~~g-~~~~---~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A   77 (239)
T 1ycs_B            4 TGQVSLPPGKRTNLRKTGSERIAHG-MRVK---FNPLPLALLLDSSLEGEFDLVQRIIYE--VDDPSLPNDEGITALHNA   77 (239)
T ss_dssp             -------------------------------------CHHHHHHHHHHTCHHHHHHHTST--TSSCCCCCTTSCCHHHHH
T ss_pred             cccccCchhhhhhhHHHHHHHhccC-CCcc---cCchhhHHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHH
Confidence            5789999999999999999999998 4432   357789999999999999999999998  889999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCC-CCCCCchHHHHH--HhcCchhHHH
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KEL-PTEDRKVIFITS--VDTGLYGKYQ  210 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~-~~~~~~~~~~~a--~~~~~~~~~~  210 (215)
                      +..|+.+++++|++.|++ ++..|..|+||||+|+..|+.+++++|+++|+ ... +..++.|+++.|  +..|+.++++
T Consensus        78 ~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~  156 (239)
T 1ycs_B           78 VCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ  156 (239)
T ss_dssp             HHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred             HHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence            999999999999999999 79999999999999999999999999999998 444 445555888888  7788899999


Q ss_pred             Hhhc
Q 037194          211 DIFK  214 (215)
Q Consensus       211 ~ll~  214 (215)
                      +|++
T Consensus       157 ~Ll~  160 (239)
T 1ycs_B          157 FLYG  160 (239)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9885

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.96  E-value=8.5e-28  Score=182.08  Aligned_cols=155  Identities=23%  Similarity=0.349  Sum_probs=139.1

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .|.++|+.|+..|+.+++++|++.+ +.... ..+..|.||||+|+..|+.+++++|++.  +.+++.++..|.||||+|
T Consensus         4 ~g~~~L~~A~~~g~~~~v~~Ll~~g-~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A   79 (285)
T 1wdy_A            4 EDNHLLIKAVQNEDVDLVQQLLEGG-ANVNF-QEEEGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATPFLLA   79 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTT-CCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHH
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHcC-CCccc-ccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHH
Confidence            4679999999999999999999998 44432 3477899999999999999999999999  899999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCC----------CCCCchHHHHHHhc
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELP----------TEDRKVIFITSVDT  203 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~----------~~~~~~~~~~a~~~  203 (215)
                      +..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....          +..+.++++.|+..
T Consensus        80 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~  158 (285)
T 1wdy_A           80 AIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK  158 (285)
T ss_dssp             HHHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHc
Confidence            999999999999999999 78899999999999999999999999999998 4433          56678899999999


Q ss_pred             CchhHHHHhhc
Q 037194          204 GLYGKYQDIFK  214 (215)
Q Consensus       204 ~~~~~~~~ll~  214 (215)
                      ++.+++++|++
T Consensus       159 ~~~~~v~~Ll~  169 (285)
T 1wdy_A          159 GHVEVLKILLD  169 (285)
T ss_dssp             TCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            99999999985

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.96  E-value=2.8e-28  Score=191.57  Aligned_cols=158  Identities=16%  Similarity=0.148  Sum_probs=136.1

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcc---hhhhh---------------hhcCCCCccHHHHHHhcC--CHHHHHHHHHc
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDY---RSIIC---------------AAITEGHQTVLHVATGAK--QTSFVQQLLTF  114 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~---~~~~~---------------~~~~~~g~~~L~~a~~~g--~~~~v~~Ll~~  114 (215)
                      .|.||||+|+..|+.++++.|++.+.   .....               ...+..|.||||+|+..|  +.+++++|++.
T Consensus        83 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~  162 (364)
T 3ljn_A           83 HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL  162 (364)
T ss_dssp             TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence            56677777777777777777777620   11110               015678999999999999  99999999999


Q ss_pred             cCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCC----CCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCC
Q 037194          115 MDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSL----LGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELP  189 (215)
Q Consensus       115 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~----~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~  189 (215)
                        |++++.+|..|.||||+|+..|+.+++++|++.|++.    ++..+..|.||||+|+..|+.+++++|+++|+ ....
T Consensus       163 --ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~  240 (364)
T 3ljn_A          163 --GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNME  240 (364)
T ss_dssp             --TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCC
T ss_pred             --CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence              9999999999999999999999999999999998872    47888999999999999999999999999999 7778


Q ss_pred             CCCCchHHHHHHhcCchhHHHHhhc
Q 037194          190 TEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       190 ~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      +..|.++++.|+..|+.+++++||+
T Consensus       241 d~~g~tpL~~A~~~g~~~~v~~Ll~  265 (364)
T 3ljn_A          241 DNEHTVPLYLSVRAAMVLLTKELLQ  265 (364)
T ss_dssp             CTTSCCHHHHHHHTCCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHhChHHHHHHHHH
Confidence            8889999999999999999999986

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.96  E-value=7.1e-28  Score=183.48  Aligned_cols=155  Identities=17%  Similarity=0.110  Sum_probs=137.9

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.. ..|.||||+
T Consensus        90 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~g~t~L~~  163 (285)
T 3d9h_A           90 ADHVSPLHEACLGGHLSCVKILLKHG-AQV--NGVTADWHTPLFNACVSGSWDCVNLLLQH--GASVQPE-SDLASPIHE  163 (285)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHTT-CCS--SCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSSCS-CTTSCHHHH
T ss_pred             CCCCCHHHHHHHCCcHHHHHHHHHCC-CCC--CCCCCCCCCHHHHHHHcCHHHHHHHHHHC--CCCCCCC-CCCCCHHHH
Confidence            57899999999999999999999998 443  34688899999999999999999999998  8887764 459999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCCCCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      |+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|++.|+..-.+..+.++++.|+..++.+++++||
T Consensus       164 A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  242 (285)
T 3d9h_A          164 AARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLM  242 (285)
T ss_dssp             HHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            9999999999999999999 799999999999999999999999999999982224677889999999999999999998


Q ss_pred             cC
Q 037194          214 KR  215 (215)
Q Consensus       214 ~~  215 (215)
                      ++
T Consensus       243 ~~  244 (285)
T 3d9h_A          243 DF  244 (285)
T ss_dssp             HT
T ss_pred             HC
Confidence            64

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.96  E-value=1.3e-27  Score=186.25  Aligned_cols=157  Identities=17%  Similarity=0.116  Sum_probs=122.9

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++..|..|.||||+
T Consensus        56 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~--g~~~~~~~~~g~t~L~~  130 (351)
T 3utm_A           56 GRKSTPLHLAAGYNRVRIVQLLLQHG-ADV--HAKDKGGLVPLHNACSYGHYEVTELLLKH--GACVNAMDLWQFTPLHE  130 (351)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcC-CCC--CccCCCCCcHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHH
Confidence            46778888888888888888888887 333  24577788888888888888888888887  78888888888888888


Q ss_pred             HHhcCcHHHHHHHHHhCCCC------------------------------------------------------------
Q 037194          134 AAAVGAVDIANLMLKKNPSL------------------------------------------------------------  153 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~------------------------------------------------------------  153 (215)
                      |+..|+.+++++|++.|++.                                                            
T Consensus       131 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  210 (351)
T 3utm_A          131 AASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS  210 (351)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTT
T ss_pred             HHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCC
Confidence            88877777777777655431                                                            


Q ss_pred             -----------------------------CCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhc
Q 037194          154 -----------------------------LGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDT  203 (215)
Q Consensus       154 -----------------------------~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~  203 (215)
                                                   ++..+..|.||||+|+..|+.+++++|+++|+ ....+..|.++++.|+..
T Consensus       211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~  290 (351)
T 3utm_A          211 HETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALA  290 (351)
T ss_dssp             CCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             CCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence                                         34567778888888888888888888888888 666677788888888888


Q ss_pred             CchhHHHHhhcC
Q 037194          204 GLYGKYQDIFKR  215 (215)
Q Consensus       204 ~~~~~~~~ll~~  215 (215)
                      |+.+++++||++
T Consensus       291 ~~~~~v~~Ll~~  302 (351)
T 3utm_A          291 GHLQTCRLLLSY  302 (351)
T ss_dssp             TCHHHHHHHHHT
T ss_pred             CcHHHHHHHHHc
Confidence            888888888763

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.96  E-value=1.8e-28  Score=185.23  Aligned_cols=156  Identities=11%  Similarity=0.119  Sum_probs=122.9

Q ss_pred             CcccHHHHHHHHcCCHH-HHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           54 CSERLLLYKAALKGEMK-EIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~-~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      ..|.+||+.|+..+..+ .++.|++.| ..+  ...+..|+||||+|+..|+.+++++|++.  +++++.++..|.||+|
T Consensus        50 ~~~~t~L~~a~~~~~~~~~v~~Ll~~G-adv--n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~--~a~~~~~~~~g~t~l~  124 (269)
T 4b93_B           50 PEFCHPLCQCPKCAPAQKRLAKVPASG-LGV--NVTSQDGSSPLHVAALHGRADLIPLLLKH--GANAGARNADQAVPLH  124 (269)
T ss_dssp             -------------------------CC-CCT--TCCCTTSCCHHHHHHHTTCTTHHHHHHHT--TCCTTCCCTTCCCHHH
T ss_pred             ccCCCHHHHHHHhCCHHHHHHHHHHCC-CCC--CCcCCCCCCHHHHHHHcCcHHHHHHHHhc--CCCcCccCCCCCCccc
Confidence            45779999999988764 778888888 443  35788999999999999999999999999  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQD  211 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~  211 (215)
                      +|+..++.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..|.+|+|.|+..|+.+++++
T Consensus       125 ~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~  203 (269)
T 4b93_B          125 LACQQGHFQVVKCLLDSNAK-PNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVEL  203 (269)
T ss_dssp             HHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred             cccccChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHH
Confidence            99999999999999999999 79999999999999999999999999999998 66777888999999999999999999


Q ss_pred             hhcC
Q 037194          212 IFKR  215 (215)
Q Consensus       212 ll~~  215 (215)
                      ||++
T Consensus       204 Ll~~  207 (269)
T 4b93_B          204 LLLH  207 (269)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            9864

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.96  E-value=2.6e-29  Score=186.17  Aligned_cols=159  Identities=17%  Similarity=0.123  Sum_probs=138.2

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhh--hhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhh
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSI--ICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAF  131 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~--~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l  131 (215)
                      ..|.||||+|+..|+.++++.|++.+ ...  .....+..|.||||+|+..|+.+++++|++.  |++++.+|..|+|||
T Consensus         6 ~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L   82 (236)
T 1ikn_D            6 EDGDSFLHLAIIHEEKALTMEVIRQV-KGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA--GCDPELRDFRGNTPL   82 (236)
T ss_dssp             -CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSC--CCCSCCCCTTCCCHH
T ss_pred             CCCCchhHHHHHcCChhHHHHHHHHh-hccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHH
Confidence            57889999999999999999999987 321  1235678899999999999999999999998  999999999999999


Q ss_pred             HHHHhcCcHHHHHHHHHhCCCC-----CCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCC-CCchHHHHHHhcC
Q 037194          132 CFAAAVGAVDIANLMLKKNPSL-----LGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTE-DRKVIFITSVDTG  204 (215)
Q Consensus       132 ~~a~~~~~~~~~~~Ll~~~~~~-----~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~-~~~~~~~~a~~~~  204 (215)
                      |+|+..|+.+++++|++.++..     .+..+..|.||||+|+..|+.+++++|+++|+ ....+. .|.+++|.|+..+
T Consensus        83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~  162 (236)
T 1ikn_D           83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ  162 (236)
T ss_dssp             HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred             HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence            9999999999999999998641     36678889999999999999999999999998 555554 7889999999999


Q ss_pred             chhHHHHhhcC
Q 037194          205 LYGKYQDIFKR  215 (215)
Q Consensus       205 ~~~~~~~ll~~  215 (215)
                      +.+++++||++
T Consensus       163 ~~~~v~~Ll~~  173 (236)
T 1ikn_D          163 NPDLVSLLLKC  173 (236)
T ss_dssp             CHHHHHHHHTT
T ss_pred             CHHHHHHHHHc
Confidence            99999999864

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.95  E-value=1.3e-27  Score=162.52  Aligned_cols=125  Identities=24%  Similarity=0.234  Sum_probs=114.0

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..+.++||+|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +++++.+|..|.||||+
T Consensus        12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~   86 (136)
T 2jab_A           12 SDLGKKLLEAARAGQDDEVRILMANG-ADV--NAKDEYGLTPLYLATAHGHLEIVEVLLKN--GADVNAVDAIGFTPLHL   86 (136)
T ss_dssp             CHHHHHHHHHHHHTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHH
T ss_pred             ccccHHHHHHHHhCCHHHHHHHHHcC-CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHH
Confidence            45679999999999999999999998 443  34688899999999999999999999998  89999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKS  184 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~  184 (215)
                      |+..++.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|++.|
T Consensus        87 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           87 AAFIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             HHHcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            9999999999999999999 7899999999999999999999999999875

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.95  E-value=2.5e-28  Score=185.94  Aligned_cols=154  Identities=18%  Similarity=0.126  Sum_probs=137.1

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCC-chhhHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENG-NTAFCF  133 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g-~t~l~~  133 (215)
                      +|+||||+|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  |++++.++..| .||||+
T Consensus        61 ~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~~t~L~~  135 (285)
T 3kea_A           61 ENEFPLHQAATLEDTKIVKILLFSG-LDD--SQFDDKGNTALYYAVDSGNMQTVKLFVKK--NWRLMFYGKTGWKTSFYH  135 (285)
T ss_dssp             TTCCHHHHHTTSSSCHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHH--CGGGGGCSSSGGGSHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCC-CCC--CCcCCCCCcHHHHHHHcCCHHHHHHHHhc--CCCCCccCCCCCCCHHHH
Confidence            5889999999999999999999998 443  24688999999999999999999999999  99999999999 799999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCch-HHHHHHhcCchhHHHH
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKV-IFITSVDTGLYGKYQD  211 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~-~~~~a~~~~~~~~~~~  211 (215)
                      |+..|+.+++++|++.|++. .- ...|.||||+|+..|+.+++++|+++|+ ....+..+.+ +++.|+..++.+++++
T Consensus       136 A~~~~~~~~v~~Ll~~g~~~-~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~  213 (285)
T 3kea_A          136 AVMLNDVSIVSYFLSEIPST-FD-LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQA  213 (285)
T ss_dssp             HHHTTCHHHHHHHHTTSCTT-CC-CSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHH
T ss_pred             HHHcCCHHHHHHHHhCCCcc-cc-ccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence            99999999999999999873 21 1279999999999999999999999998 5555655655 4999999999999999


Q ss_pred             hhcC
Q 037194          212 IFKR  215 (215)
Q Consensus       212 ll~~  215 (215)
                      ||++
T Consensus       214 Ll~~  217 (285)
T 3kea_A          214 LFKY  217 (285)
T ss_dssp             HTTS
T ss_pred             HHHc
Confidence            9874

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.95  E-value=1.8e-27  Score=186.94  Aligned_cols=156  Identities=13%  Similarity=0.091  Sum_probs=130.6

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccC--CCCccc---------
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMD--PEDLML---------  122 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~--~~~~~~---------  122 (215)
                      ..|+||||+|+..|+.+++++|++.+ ..    ..+..|.||||+|+..|+.+++++|++...  +.+++.         
T Consensus        51 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~  125 (364)
T 3ljn_A           51 RFGCTALHLACKFGCVDTAKYLASVG-EV----HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDERE  125 (364)
T ss_dssp             TTCCCHHHHHHHHCCHHHHHHHHHHC-CC----CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCC
T ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHCC-CC----ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHh
Confidence            46788888888888888888888887 31    234478888888888888888888887611  233443         


Q ss_pred             --------ccCCCchhhHHHHhcC--cHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCCC------
Q 037194          123 --------QDENGNTAFCFAAAVG--AVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEK------  186 (215)
Q Consensus       123 --------~~~~g~t~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~~------  186 (215)
                              .|..|.||||+|+..|  +.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+.      
T Consensus       126 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~  204 (364)
T 3ljn_A          126 VNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRL  204 (364)
T ss_dssp             EEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT
T ss_pred             hhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc
Confidence                    7889999999999999  99999999999999 799999999999999999999999999998862      


Q ss_pred             CCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          187 ELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       187 ~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      ...+..+.+++|.|+..|+.+++++||++
T Consensus       205 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  233 (364)
T 3ljn_A          205 DYANKQGNSHLHWAILINWEDVAMRFVEM  233 (364)
T ss_dssp             TCCCTTCCCTTHHHHTTTCHHHHHHHHTT
T ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence            33566788899999999999999999864

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.95  E-value=3e-28  Score=165.76  Aligned_cols=125  Identities=18%  Similarity=0.167  Sum_probs=110.2

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCC-CchhhH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDEN-GNTAFC  132 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~-g~t~l~  132 (215)
                      ..|.|+||+|+..|+.+++++|++.+ ...  ...+..|+||||+|+. |+.+++++|++.  +++++.+|.. |+||||
T Consensus        10 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~--g~~~~~~~~~~g~t~L~   83 (136)
T 1d9s_A           10 GSSDAGLATAAARGQVETVRQLLEAG-ADP--NALNRFGRRPIQVMMM-GSAQVAELLLLH--GAEPNCADPATLTRPVH   83 (136)
T ss_dssp             CCCSCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTCCTTTTTSTT-SCHHHHHHHHHH--TCCSSCCBTTTTBCHHH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHcC-CCc--CCcCCCCCCHHHHHHc-CCHHHHHHHHHC--CCCCCCcCCCCCCCHHH
Confidence            46778999999999999999999987 433  2467889999999999 999999999998  8899999988 899999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      +|+..++.+++++|++.|++ ++..|..|.||||+|+..++.+++++|+++|+
T Consensus        84 ~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga  135 (136)
T 1d9s_A           84 DAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATG  135 (136)
T ss_dssp             HHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred             HHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            99999999999999999988 78888899999999999999999999998875

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.95  E-value=5.7e-28  Score=181.08  Aligned_cols=155  Identities=17%  Similarity=0.179  Sum_probs=130.6

Q ss_pred             ccHHHHHHHHcCCHHH----HHHHHhhcchhhhh--hhcCCCCccHHHHHHhc---CCHHHHHHHHHccCCCCccc----
Q 037194           56 ERLLLYKAALKGEMKE----IEGLFEKDYRSIIC--AAITEGHQTVLHVATGA---KQTSFVQQLLTFMDPEDLML----  122 (215)
Q Consensus        56 g~~~L~~a~~~g~~~~----~~~ll~~~~~~~~~--~~~~~~g~~~L~~a~~~---g~~~~v~~Ll~~~~~~~~~~----  122 (215)
                      |+|+||.|+..|+.+.    +++|++.+ .....  ...+..|+||||+|+..   |+.+++++|++.  +++++.    
T Consensus         2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g-~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~--g~~~~~~~~~   78 (256)
T 2etb_A            2 DRDRLFSVVSRGVPEELTGLLEYLRWNS-KYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI--DKDSGNPKPL   78 (256)
T ss_dssp             CHHHHHHHHHHTCGGGGTTHHHHHHHHT-CCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH--HHHTTCSSCG
T ss_pred             CccHHHHHHHcCCHHHHHHHHHHHHHcC-CCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc--CCcccchhhh
Confidence            7899999999999974    45555566 32211  02688999999999999   999999999998  665542    


Q ss_pred             -------ccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCC-------------CCCHHHHHHHhCCHHHHHHHhh
Q 037194          123 -------QDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSK-------------NMPPLYFAALFGQTDTASFLFH  182 (215)
Q Consensus       123 -------~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-------------g~t~l~~a~~~g~~~~v~~Ll~  182 (215)
                             .|..|.||||+|+..|+.+++++|++.|++ ++..+..             |.||||+|+..|+.+++++|++
T Consensus        79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~  157 (256)
T 2etb_A           79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE  157 (256)
T ss_dssp             GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred             cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence                   347799999999999999999999999999 7888776             9999999999999999999999


Q ss_pred             ---cCC-CCCCCCCCchHHHHHHh--cCchh-------HHHHhhc
Q 037194          183 ---KSE-KELPTEDRKVIFITSVD--TGLYG-------KYQDIFK  214 (215)
Q Consensus       183 ---~~~-~~~~~~~~~~~~~~a~~--~~~~~-------~~~~ll~  214 (215)
                         .|+ ....+..|.|++|.|+.  .+..+       ++++||+
T Consensus       158 ~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~  202 (256)
T 2etb_A          158 NPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQ  202 (256)
T ss_dssp             CSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH
Confidence               887 66777888889998888  67777       8888875

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.95  E-value=3.6e-27  Score=189.40  Aligned_cols=154  Identities=19%  Similarity=0.210  Sum_probs=75.7

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .|.+|||+|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++..+..|.||||+|
T Consensus       211 ~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A  285 (437)
T 1n11_A          211 NGYTPLHIAAKQNQVEVARSLLQYG-GSA--NAESVQGVTPLHLAAQEGHAEMVALLLSK--QANGNLGNKSGLTPLHLV  285 (437)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcC-CCC--CCCCCCCCCHHHHHHHCCCHHHHHHHHhc--CCCCCCCCCCCCCHHHHH
Confidence            3445555555555555555555544 221  12344455555555555555555555554  444444455555555555


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      +..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+ ....+..|.+|++.|+..|+.+++++||
T Consensus       286 ~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll  364 (437)
T 1n11_A          286 AQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL  364 (437)
T ss_dssp             HHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHcCCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHH
Confidence            555555555555555544 34444455555555555555555555555544 3334444444444444555555555544


Q ss_pred             c
Q 037194          214 K  214 (215)
Q Consensus       214 ~  214 (215)
                      +
T Consensus       365 ~  365 (437)
T 1n11_A          365 K  365 (437)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.95  E-value=3e-27  Score=186.46  Aligned_cols=158  Identities=15%  Similarity=0.141  Sum_probs=125.0

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchh-hhhhhcCCCCccHHHHHHhcC---CHHHHHHHHHccCCCCccc-------
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRS-IICAAITEGHQTVLHVATGAK---QTSFVQQLLTFMDPEDLML-------  122 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~-~~~~~~~~~g~~~L~~a~~~g---~~~~v~~Ll~~~~~~~~~~-------  122 (215)
                      ..|.||||+|+..|+.+++++|++.+ .. ......+..|.||||+|+..+   +.+++++|++.  +.+++.       
T Consensus       197 ~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~--g~~~~~~~~~~~~  273 (373)
T 2fo1_E          197 KSERSALHQAAANRDFGMMVYMLNST-KLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK--GAKVDYDGAARKD  273 (373)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHTTSH-HHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH--TCCSSCCSGGGTS
T ss_pred             CCCCCHHHHHHHCCCHHHHHHHHhcC-ccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC--CCCcccccccccC
Confidence            35667777777777777777777654 21 112235677888888888887   77888888888  777665       


Q ss_pred             -ccCCCchhhHHHHhcCcHHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHH
Q 037194          123 -QDENGNTAFCFAAAVGAVDIANLMLKKN-PSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFIT  199 (215)
Q Consensus       123 -~~~~g~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~  199 (215)
                       .|..|.||||+|+..|+.+++++|++.+ ++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..|.++++.
T Consensus       274 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~  352 (373)
T 2fo1_E          274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN-KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQL  352 (373)
T ss_dssp             SSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHH
T ss_pred             cccccCCCHHHHHHHhCCHHHHHHHHHhcCCC-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHH
Confidence             5668899999999999999999999886 66 78889999999999999999999999999988 66677778888899


Q ss_pred             HHhcCchhHHHHhhcC
Q 037194          200 SVDTGLYGKYQDIFKR  215 (215)
Q Consensus       200 a~~~~~~~~~~~ll~~  215 (215)
                      |+..|+.+++++|+++
T Consensus       353 A~~~g~~~iv~~Ll~~  368 (373)
T 2fo1_E          353 AQANNHHNIVDIFDRC  368 (373)
T ss_dssp             HHHTTCHHHHHHHHTT
T ss_pred             HHHcCCHHHHHHHHhc
Confidence            9899999999998863

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.95  E-value=3.4e-27  Score=157.92  Aligned_cols=125  Identities=25%  Similarity=0.365  Sum_probs=116.4

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      +|+|+||.|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.+|..|.||||+|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~l~~A   75 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAG-ADV--NAKDKNGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLA   75 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHT-CCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHH
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcC-CCC--CCcCCCCCcHHHHHHHcCcHHHHHHHHHc--CCCCcccCCCCCcHHHHH
Confidence            4789999999999999999999988 443  24688899999999999999999999999  899999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      +..++.+++++|++.|++ ++..|..|.|||++|+..|+.+++++|+++|+
T Consensus        76 ~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga  125 (126)
T 1n0r_A           76 ARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA  125 (126)
T ss_dssp             HHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred             HHcChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence            999999999999999999 78999999999999999999999999999985

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.95  E-value=4.8e-28  Score=168.52  Aligned_cols=138  Identities=19%  Similarity=0.157  Sum_probs=116.2

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCch-hhH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNT-AFC  132 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t-~l~  132 (215)
                      ..|.++||+|+..|+.+++++|++.+ ...  ...+..|+||||+|+ .|+.+++++|++.  +++++.+|..|+| |||
T Consensus        10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~--g~~~~~~d~~g~ttpL~   83 (156)
T 1bi7_B           10 EPSADWLATAAARGRVEEVRALLEAG-ANP--NAPNSYGRRPIQVMM-MGSARVAELLLLH--GAEPNCADPATLTRPVH   83 (156)
T ss_dssp             CCSTTHHHHHHHHTCHHHHHHHHTTT-CCT--TCCCSSSCCTTTSSC-TTCHHHHHHHHTT--TCCCCCCCTTTCCCHHH
T ss_pred             ccchHHHHHHHHcCCHHHHHHHHHcC-CCC--CCCCCCCCCHHHHHH-cCCHHHHHHHHHc--CCCCCCcCCCCCcHHHH
Confidence            46779999999999999999999998 443  346889999999985 9999999999999  9999999999999 999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFI  198 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~  198 (215)
                      +|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+ ....+..+.++..
T Consensus        84 ~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~  149 (156)
T 1bi7_B           84 DAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE  149 (156)
T ss_dssp             HHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred             HHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence            99999999999999999999 79999999999999999999999999999998 6666666666644

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.95  E-value=1.3e-26  Score=175.59  Aligned_cols=154  Identities=18%  Similarity=0.191  Sum_probs=93.5

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccc----------c
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQ----------D  124 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~----------~  124 (215)
                      .|.||||+|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++..          +
T Consensus        71 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~~~~~~~~~  145 (285)
T 1wdy_A           71 NGATPFLLAAIAGSVKLLKLFLSKG-ADV--NECDFYGFTAFMEAAVYGKVKALKFLYKR--GANVNLRRKTKEDQERLR  145 (285)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHTT-CCT--TCBCTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCCCCHHHHHTT
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcC-CCC--CccCcccCCHHHHHHHhCCHHHHHHHHHh--CCCcccccccHHHHHhhc
Confidence            4556666666666666666666655 222  13455566666666666666666666665  5555544          4


Q ss_pred             CCCchhhHHHHhcCcHHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHhCC----HHHHHHHhhcCC-CCCCCCCCchHHH
Q 037194          125 ENGNTAFCFAAAVGAVDIANLMLKK-NPSLLGIRGSKNMPPLYFAALFGQ----TDTASFLFHKSE-KELPTEDRKVIFI  198 (215)
Q Consensus       125 ~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~g~----~~~v~~Ll~~~~-~~~~~~~~~~~~~  198 (215)
                      ..|.||||+|+..|+.+++++|++. |++ ++..+..|.||||+|+..++    .+++++|+++|+ ....+..+.++++
T Consensus       146 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~  224 (285)
T 1wdy_A          146 KGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI  224 (285)
T ss_dssp             CCCCCHHHHHHHHTCHHHHHHHHHTSCCC-TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred             cCCCcHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence            5566666666666666666666665 555 55666666666666666666    666666666666 4455556666667


Q ss_pred             HHHhcCchhHHHHhhc
Q 037194          199 TSVDTGLYGKYQDIFK  214 (215)
Q Consensus       199 ~a~~~~~~~~~~~ll~  214 (215)
                      .|+..++.+++++||+
T Consensus       225 ~A~~~~~~~~v~~Ll~  240 (285)
T 1wdy_A          225 LAVEKKHLGLVQRLLE  240 (285)
T ss_dssp             HHHHTTCHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHh
Confidence            6667777777777664

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.95  E-value=7.5e-28  Score=182.09  Aligned_cols=157  Identities=17%  Similarity=0.163  Sum_probs=132.9

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhh------hhhcCCCCccHHHHHHhc---CCHHHHHHHHHccCCCC-----
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSII------CAAITEGHQTVLHVATGA---KQTSFVQQLLTFMDPED-----  119 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~------~~~~~~~g~~~L~~a~~~---g~~~~v~~Ll~~~~~~~-----  119 (215)
                      ..|+|+||.|+..|+.++++.|++.+ ....      ....+..|+||||+|+..   |+.+++++|++.  +++     
T Consensus        11 ~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~--ga~~~~~~   87 (273)
T 2pnn_A           11 LYDRRSIFDAVAQSNCQELESLLPFL-QRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDV--ARKTDSLK   87 (273)
T ss_dssp             CCCHHHHHHHHHTTCSSTTTTHHHHH-HHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHH--HHHTTCHH
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHHH-hhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHh--hccccchh
Confidence            56789999999999999999999864 2111      113477899999999987   999999999998  543     


Q ss_pred             --cc----cccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCC--------------CCCCHHHHHHHhCCHHHHHH
Q 037194          120 --LM----LQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGS--------------KNMPPLYFAALFGQTDTASF  179 (215)
Q Consensus       120 --~~----~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~--------------~g~t~l~~a~~~g~~~~v~~  179 (215)
                        ++    ..|..|+||||+|+..|+.+++++|++.|++ ++..+.              .|.||||+|+..|+.+++++
T Consensus        88 ~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~  166 (273)
T 2pnn_A           88 QFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF  166 (273)
T ss_dssp             HHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred             HHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence              22    2567899999999999999999999999999 688776              79999999999999999999


Q ss_pred             Hhh---cCC-CCCCCCCCchHHHHHHhcCc---------hhHHHHhhc
Q 037194          180 LFH---KSE-KELPTEDRKVIFITSVDTGL---------YGKYQDIFK  214 (215)
Q Consensus       180 Ll~---~~~-~~~~~~~~~~~~~~a~~~~~---------~~~~~~ll~  214 (215)
                      |++   .|+ ....+..|.|++|.|+..++         .+++++||+
T Consensus       167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~  214 (273)
T 2pnn_A          167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI  214 (273)
T ss_dssp             HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHH
Confidence            999   787 66777888889998888777         678888875

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.95  E-value=7.5e-27  Score=164.87  Aligned_cols=126  Identities=19%  Similarity=0.209  Sum_probs=119.0

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+
T Consensus        34 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~  108 (172)
T 3v30_A           34 ERGFTPLIWASAFGEIETVRFLLEWG-ADP--HILAKERESALSLASTGGYTDIVGLLLER--DVDINIYDWNGGTPLLY  108 (172)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHHT-CCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHTT--TCCTTCCCTTSCCHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcC-CCc--hhhcccCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCCCCCCCCHHHH
Confidence            57889999999999999999999998 443  34688999999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |+..++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++++
T Consensus       109 A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~  159 (172)
T 3v30_A          109 AVRGNHVKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIENHIL  159 (172)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH
Confidence            9999999999999999999 79999999999999999999999999999997

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.95  E-value=3.9e-27  Score=185.80  Aligned_cols=156  Identities=20%  Similarity=0.257  Sum_probs=141.3

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCC---CCcccccCCCchh
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDP---EDLMLQDENGNTA  130 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~---~~~~~~~~~g~t~  130 (215)
                      ..|.||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +   .+++..|..|.||
T Consensus       164 ~~g~TpL~~A~~~g~~~iv~~Ll~~g-a~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~d~~g~t~  238 (373)
T 2fo1_E          164 CDENTPLMLAVLARRRRLVAYLMKAG-ADP--TIYNKSERSALHQAAANRDFGMMVYMLNS--TKLKGDIEELDRNGMTA  238 (373)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTT-CCS--CCCCTTCCCHHHHHHHTTCHHHHHHHTTS--HHHHHTTSCCCTTSCCH
T ss_pred             CCCCCHHHHHHHcChHHHHHHHHHCC-CCC--cccCCCCCCHHHHHHHCCCHHHHHHHHhc--CccccChhhcCCCCCCH
Confidence            57899999999999999999999998 443  34688999999999999999999999997  5   7899999999999


Q ss_pred             hHHHHhcC---cHHHHHHHHHhCCCCCCC--------CCCCCCCHHHHHHHhCCHHHHHHHhhcC-C-CCCCCCCCchHH
Q 037194          131 FCFAAAVG---AVDIANLMLKKNPSLLGI--------RGSKNMPPLYFAALFGQTDTASFLFHKS-E-KELPTEDRKVIF  197 (215)
Q Consensus       131 l~~a~~~~---~~~~~~~Ll~~~~~~~~~--------~~~~g~t~l~~a~~~g~~~~v~~Ll~~~-~-~~~~~~~~~~~~  197 (215)
                      ||+|+..+   +.+++++|++.|++ ++.        .+..|.||||+|+..|+.+++++|++++ + ....+..|.|++
T Consensus       239 L~~A~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL  317 (373)
T 2fo1_E          239 LMIVAHNEGRDQVASAKLLVEKGAK-VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI  317 (373)
T ss_dssp             HHHHHHSCSTTHHHHHHHHHHHTCC-SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred             HHHHHHhCCcchHHHHHHHHHCCCC-cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence            99999998   89999999999998 554        5678999999999999999999999987 4 666778889999


Q ss_pred             HHHHhcCchhHHHHhhcC
Q 037194          198 ITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       198 ~~a~~~~~~~~~~~ll~~  215 (215)
                      +.|+..|+.+++++||++
T Consensus       318 ~~A~~~g~~~iv~~Ll~~  335 (373)
T 2fo1_E          318 MLAAQEGRIEVVMYLIQQ  335 (373)
T ss_dssp             HHHHHHTCHHHHHHHHHT
T ss_pred             HHHHHcCCHHHHHHHHHc
Confidence            999999999999999864

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.95  E-value=5.1e-28  Score=173.02  Aligned_cols=151  Identities=11%  Similarity=0.011  Sum_probs=132.8

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCH----HHHHHHHHccCCCCcccccCCCchhhH
Q 037194           57 RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQT----SFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        57 ~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~----~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      +++|+.|+..|+++.++.++..+ ...   ..+..|+||||+|+..|+.    +++++|++.  |++++.+|..|+||||
T Consensus         7 ~~~l~~Aa~~g~~~~~~~l~~~~-~~~---~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~--Gadvn~~d~~g~TpLh   80 (186)
T 3t8k_A            7 YRTVSAAAMLGTYEDFLELFEKG-YED---KESVLKSNILYDVLRNNNDEARYKISMFLINK--GADIKSRTKEGTTLFF   80 (186)
T ss_dssp             CSSHHHHHHHSCHHHHHHHHHHS-SSC---HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT--TCCSSCCCTTCCCTHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHhcC-ccc---ccccCCCCHHHHHHHcCCcchHHHHHHHHHHC--CCCCCCCCCCCCcHHH
Confidence            36799999999999999999887 332   2236799999999999975    589999999  9999999999999999


Q ss_pred             HHHhcCc------HHHHHHHHHhCCCCCCCCCCCCC-CHHHHHHHhC-----CHHHHHHHhh-cCC-CCCCCCCCchHHH
Q 037194          133 FAAAVGA------VDIANLMLKKNPSLLGIRGSKNM-PPLYFAALFG-----QTDTASFLFH-KSE-KELPTEDRKVIFI  198 (215)
Q Consensus       133 ~a~~~~~------~~~~~~Ll~~~~~~~~~~~~~g~-t~l~~a~~~g-----~~~~v~~Ll~-~~~-~~~~~~~~~~~~~  198 (215)
                      +|+..++      .+++++|++.|++ ++..|..|. ||||+|+..+     ..+++++|++ +|+ ....+..|.||++
T Consensus        81 ~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~  159 (186)
T 3t8k_A           81 PLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE  159 (186)
T ss_dssp             HHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred             HHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHH
Confidence            9999886      6789999999999 899999999 9999999844     4579999999 888 7778888999999


Q ss_pred             HHHhcCchhHHHHhhc
Q 037194          199 TSVDTGLYGKYQDIFK  214 (215)
Q Consensus       199 ~a~~~~~~~~~~~ll~  214 (215)
                      .|...+..+++++|+.
T Consensus       160 ~A~~~~~~~~v~~L~~  175 (186)
T 3t8k_A          160 FVKRCQKPIALKMMED  175 (186)
T ss_dssp             HHHTTTCHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHH
Confidence            9999999999988864

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.95  E-value=1.3e-26  Score=171.42  Aligned_cols=153  Identities=20%  Similarity=0.201  Sum_probs=101.1

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHH
Q 037194           56 ERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAA  135 (215)
Q Consensus        56 g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~  135 (215)
                      |.+||+.|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.++..|.||||+|+
T Consensus        76 ~~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~--~~~~~~~~~~g~t~l~~a~  150 (240)
T 3eu9_A           76 NSTPLHWATRQGHLSMVVQLMKYG-ADP--SLIDGEGCSCIHLAAQFGHTSIVAYLIAK--GQDVDMMDQNGMTPLMWAA  150 (240)
T ss_dssp             TBCHHHHHHHHTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH
T ss_pred             CCChhHHHHHcCCHHHHHHHHHcC-CCC--cccCCCCCCHHHHHHHcCHHHHHHHHHhc--CCCccccCCCCCcHHHHHH
Confidence            556666666666666666666655 222  23455566666666666666666666666  5666666666666666666


Q ss_pred             hcCc-HHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          136 AVGA-VDIANLMLKKNPSLLGIRGS-KNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       136 ~~~~-~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      ..++ .+++++|++.+++ ++..+. .|.||||+|+..|+.+++++|+++|+ ....+..|.++++.|+..++.+++++|
T Consensus       151 ~~~~~~~~~~~L~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L  229 (240)
T 3eu9_A          151 YRTHSVDPTRLLLTFNVS-VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHL  229 (240)
T ss_dssp             HHCCSSTTHHHHHHTTCC-TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred             HhCChHHHHHHHHhcCCC-cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence            4444 5666666666666 455554 67788888888888888888888877 555666677777877788888888877


Q ss_pred             hc
Q 037194          213 FK  214 (215)
Q Consensus       213 l~  214 (215)
                      ++
T Consensus       230 ~~  231 (240)
T 3eu9_A          230 QE  231 (240)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.95  E-value=1.2e-26  Score=171.66  Aligned_cols=156  Identities=21%  Similarity=0.220  Sum_probs=140.2

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.|+||.|+..|+.+++++|++.+ ..... ..+..|.||||+|+..|+.+++++|++.  +.+++.++..|.||||+
T Consensus        40 ~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~-~~~~~~~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~  115 (240)
T 3eu9_A           40 KENVTLLHWAAINNRIDLVKYYISKG-AIVDQ-LGGDLNSTPLHWATRQGHLSMVVQLMKY--GADPSLIDGEGCSCIHL  115 (240)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTC-CBTTTTBCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred             CCCCCHHHHHHHhCCHHHHHHHHHcC-Ccchh-hcCCcCCChhHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHH
Confidence            57889999999999999999999998 44432 3456699999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCC-HHHHHHHhhcCC-CCCCC-CCCchHHHHHHhcCchhHHH
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQ-TDTASFLFHKSE-KELPT-EDRKVIFITSVDTGLYGKYQ  210 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~-~~~v~~Ll~~~~-~~~~~-~~~~~~~~~a~~~~~~~~~~  210 (215)
                      |+..++.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|++.++ ....+ ..+.++++.|+..+..++++
T Consensus       116 A~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~  194 (240)
T 3eu9_A          116 AAQFGHTSIVAYLIAKGQD-VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVIS  194 (240)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHH
T ss_pred             HHHcCHHHHHHHHHhcCCC-ccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHH
Confidence            9999999999999999999 79999999999999998777 899999999998 44444 37888999999999999999


Q ss_pred             Hhhc
Q 037194          211 DIFK  214 (215)
Q Consensus       211 ~ll~  214 (215)
                      +|++
T Consensus       195 ~Ll~  198 (240)
T 3eu9_A          195 LLLE  198 (240)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9986

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.95  E-value=7.5e-27  Score=163.19  Aligned_cols=126  Identities=23%  Similarity=0.301  Sum_probs=117.1

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||.|+. |+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.+|..|.||||+
T Consensus        36 ~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~  109 (162)
T 1ihb_A           36 GFGRTALQVMKL-GNPEIARRLLLRG-ANP--DLKDRTGFAVIHDAARAGFLDTLQTLLEF--QADVNIEDNEGNLPLHL  109 (162)
T ss_dssp             TTSCCHHHHCCS-SCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred             ccCccHHHHHHc-CcHHHHHHHHHcC-CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHH
Confidence            578899999999 9999999999998 443  34688999999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |+..|+.+++++|++.|++.++..+..|.||||+|+..|+.+++++|+++|+
T Consensus       110 A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA  161 (162)
T 1ihb_A          110 AAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA  161 (162)
T ss_dssp             HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred             HHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence            9999999999999999998568999999999999999999999999999985

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.94  E-value=2e-26  Score=162.37  Aligned_cols=125  Identities=22%  Similarity=0.275  Sum_probs=116.8

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.|+||.|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.+|..|.||||+
T Consensus        45 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~  119 (169)
T 2y1l_E           45 ASGWTPLHLAAFNGHLEIVEVLLKNG-ADV--NAVDHAGMTPLRLAALFGHLEIVEVLLKN--GADVNANDMEGHTPLHL  119 (169)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcC-CCC--CccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHH
Confidence            57889999999999999999999998 443  34688899999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKS  184 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~  184 (215)
                      |+..++.+++++|++.|++ ++..|..|.|||++|+..|+.+++++|++.|
T Consensus       120 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E          120 AAMFGHLEIVEVLLKNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred             HHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            9999999999999999999 7999999999999999999999999999875

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.94  E-value=9.6e-27  Score=158.27  Aligned_cols=125  Identities=17%  Similarity=0.105  Sum_probs=117.9

Q ss_pred             hcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCC-CCCHH
Q 037194           87 AITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSK-NMPPL  165 (215)
Q Consensus        87 ~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-g~t~l  165 (215)
                      ..+..|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+. ++.+++++|++.|++ ++..+.. |.|||
T Consensus         7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~t~L   82 (136)
T 1d9s_A            7 MLGGSSDAGLATAAARGQVETVRQLLEA--GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLTRPV   82 (136)
T ss_dssp             CCCCCCSCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTBCHH
T ss_pred             CCCCCCccHHHHHHHcCCHHHHHHHHHc--CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCCCHH
Confidence            4678899999999999999999999999  99999999999999999999 999999999999999 7999999 99999


Q ss_pred             HHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          166 YFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       166 ~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      |+|+..|+.+++++|+++|+ ....+..+.+|++.|+..++.+++++|+++
T Consensus        83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~  133 (136)
T 1d9s_A           83 HDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA  133 (136)
T ss_dssp             HHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            99999999999999999998 667778889999999999999999999863

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.94  E-value=1.4e-26  Score=177.11  Aligned_cols=153  Identities=18%  Similarity=0.236  Sum_probs=132.6

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCccccc---------
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQD---------  124 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~---------  124 (215)
                      ..|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++..+         
T Consensus        71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~--~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~  145 (299)
T 1s70_B           71 VDGLTALHQACIDDNVDMVKFLVENG-ANI--NQPDNEGWIPLHAAASCGYLDIAEYLISQ--GAHVGAVNSEGDTPLDI  145 (299)
T ss_dssp             TTCCBHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCC-CCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHhC--CCCCCCcCCCCCCHHHH
Confidence            57889999999999999999999998 443  34688999999999999999999999998  77766544         


Q ss_pred             ---------------------------------------------------CCCchhhHHHHhcCcHHHHHHHHHhCCCC
Q 037194          125 ---------------------------------------------------ENGNTAFCFAAAVGAVDIANLMLKKNPSL  153 (215)
Q Consensus       125 ---------------------------------------------------~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~  153 (215)
                                                                         ..|.||||+|+..|+.+++++|++.|++ 
T Consensus       146 A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-  224 (299)
T 1s70_B          146 AEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-  224 (299)
T ss_dssp             CCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-
T ss_pred             HHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-
Confidence                                                               3477889999999999999999999999 


Q ss_pred             CCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          154 LGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       154 ~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      ++..|..|.||||+|+..|+.+++++|+++|+ ....+..|.+|++.|... ..+....++
T Consensus       225 ~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~  284 (299)
T 1s70_B          225 VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-ILGYLEELQ  284 (299)
T ss_dssp             TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHH
T ss_pred             CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHH
Confidence            79999999999999999999999999999999 777788888899988554 345555544

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.94  E-value=4e-26  Score=155.20  Aligned_cols=125  Identities=23%  Similarity=0.252  Sum_probs=116.4

Q ss_pred             cCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 037194           88 ITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYF  167 (215)
Q Consensus        88 ~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~  167 (215)
                      ....+.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..++.+++++|++.|++ ++..|..|.||||+
T Consensus        10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~   86 (136)
T 2jab_A           10 HGSDLGKKLLEAARAGQDDEVRILMAN--GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHL   86 (136)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred             ccccccHHHHHHHHhCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHH
Confidence            355688999999999999999999999  999999999999999999999999999999999999 79999999999999


Q ss_pred             HHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          168 AALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       168 a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      |+..|+.+++++|+++|+ ....+..+.++++.|+..++.+++++|+++
T Consensus        87 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~  135 (136)
T 2jab_A           87 AAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL  135 (136)
T ss_dssp             HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred             HHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence            999999999999999998 666778889999999999999999999864

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.94  E-value=7.4e-26  Score=176.30  Aligned_cols=127  Identities=23%  Similarity=0.262  Sum_probs=117.2

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..+.++|+.|+..|+.+.++.++... ..... ..+..|.||||+|+..|+.+++++|++.  |.+++.+|..|+||||+
T Consensus        22 ~~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~   97 (351)
T 3utm_A           22 EYKKDELLEAARSGNEEKLMALLTPL-NVNCH-ASDGRKSTPLHLAAGYNRVRIVQLLLQH--GADVHAKDKGGLVPLHN   97 (351)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCC-CSSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHH
T ss_pred             cccchhHHHHHHcCCHHHHHHHHHhc-CCCcc-cCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCcHHHH
Confidence            34568999999999999999999875 33332 4688899999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|+
T Consensus        98 A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  148 (351)
T 3utm_A           98 ACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGA  148 (351)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            9999999999999999999 79999999999999999999999999999987

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.94  E-value=1.3e-26  Score=173.91  Aligned_cols=158  Identities=17%  Similarity=0.183  Sum_probs=129.8

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHh----hcchhhhhh--hcCCCCccHHHHHH---hcCCHHHHHHHHHccC---------
Q 037194           55 SERLLLYKAALKGEMKEIEGLFE----KDYRSIICA--AITEGHQTVLHVAT---GAKQTSFVQQLLTFMD---------  116 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~----~~~~~~~~~--~~~~~g~~~L~~a~---~~g~~~~v~~Ll~~~~---------  116 (215)
                      .|+++|+.|+..|+.+.++.|++    .+ ......  ..+..|.||||+|+   ..|+.+++++|++.+.         
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~-~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~   82 (260)
T 3jxi_A            4 FNRPILFDIVSRGSPDGLEGLLSFLLTHK-KRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI   82 (260)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHT-CCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred             chHHHHHHHHHhCCHHHHHHHHHHHHhcC-CCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence            46799999999999997666666    55 333211  12477999999999   7799999999999721         


Q ss_pred             CCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCC--------------CCCCCHHHHHHHhCCHHHHHHHhh
Q 037194          117 PEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRG--------------SKNMPPLYFAALFGQTDTASFLFH  182 (215)
Q Consensus       117 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~g~t~l~~a~~~g~~~~v~~Ll~  182 (215)
                      ....+..|..|+||||+|+..|+.+++++|++.|++ ++..+              ..|.||||+|+..|+.+++++|++
T Consensus        83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~  161 (260)
T 3jxi_A           83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE  161 (260)
T ss_dssp             TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred             cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence            133455566899999999999999999999999999 78887              689999999999999999999999


Q ss_pred             ---cCC-CCCCCCCCchHHHHHHhcCc---------hhHHHHhhc
Q 037194          183 ---KSE-KELPTEDRKVIFITSVDTGL---------YGKYQDIFK  214 (215)
Q Consensus       183 ---~~~-~~~~~~~~~~~~~~a~~~~~---------~~~~~~ll~  214 (215)
                         .|+ ....+..|.|++|.|+..+.         .+++++||+
T Consensus       162 ~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~  206 (260)
T 3jxi_A          162 NGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI  206 (260)
T ss_dssp             CSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH
Confidence               777 66777888889998887666         578888875

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.94  E-value=9.3e-26  Score=175.46  Aligned_cols=152  Identities=15%  Similarity=0.158  Sum_probs=132.4

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCC----HHHHHHHHHccCCCCcccccCCCch
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQ----TSFVQQLLTFMDPEDLMLQDENGNT  129 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~----~~~v~~Ll~~~~~~~~~~~~~~g~t  129 (215)
                      ..|.||||+|+..|+.++++.|+++. ...+ ...+..|.+++|.++..+.    ..++++|++.  |++++.+|..|+|
T Consensus       166 ~~g~T~L~~A~~~g~~~~v~~LL~~~-gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~--gad~n~~d~~g~t  241 (337)
T 4g8k_A          166 KGGATALMDAAEKGHVEVLKILLDEM-GADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDH--GADVNVRGERGKT  241 (337)
T ss_dssp             TCSCCHHHHHHHHTCHHHHHHHHHHS-CCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT--TCCTTCCCGGGCC
T ss_pred             CCCCcHHHHHHHCCCHHHHHHHHhcc-CCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC--CCCCCCcCCCCCC
Confidence            46789999999999999999999763 2222 2578899999998877654    4688999999  9999999999999


Q ss_pred             hhHHHHhcCcHHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchh
Q 037194          130 AFCFAAAVGAVDIANLMLKK-NPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYG  207 (215)
Q Consensus       130 ~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~  207 (215)
                      |||+|+..|+.+++++|+.. +++ ++..|..|+||||+|+..|+.++|++|+++|+ ...     .++++.|+..++.+
T Consensus       242 ~L~~a~~~~~~~~v~~Ll~~~~~~-vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~  315 (337)
T 4g8k_A          242 PLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHS  315 (337)
T ss_dssp             HHHHHHHTTCHHHHHHHHTSTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHH
T ss_pred             HHHHHHHhhhhHHHHHHHHhcCCc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHH
Confidence            99999999999999999985 666 89999999999999999999999999999997 332     34888888999999


Q ss_pred             HHHHhhcC
Q 037194          208 KYQDIFKR  215 (215)
Q Consensus       208 ~~~~ll~~  215 (215)
                      ++++||++
T Consensus       316 iv~~Ll~~  323 (337)
T 4g8k_A          316 LVKVLLSH  323 (337)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            99999974

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.94  E-value=5.5e-26  Score=157.47  Aligned_cols=122  Identities=22%  Similarity=0.185  Sum_probs=114.3

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      ...|.||||.|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.+|..|.||||
T Consensus        31 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~  105 (153)
T 1awc_B           31 DWLGTSPLHLAAQYGHFSTTEVLLRAG-VSR--DARTKVDRTPLHMAASEGHANIVEVLLKH--GADVNAKDMLKMTALH  105 (153)
T ss_dssp             CTTCCCHHHHHHHHTCHHHHHHHHTTT-CCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTSCCHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCC--CCCCCCCCCHHHHHHHcChHHHHHHHHHc--CCCCCCCCCCCCCHHH
Confidence            457889999999999999999999988 443  34688899999999999999999999999  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFL  180 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~L  180 (215)
                      +|+..++.+++++|++.|++ ++..+..|.|||++|+..|+.+++++|
T Consensus       106 ~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B          106 WATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            99999999999999999999 799999999999999999999999987

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.94  E-value=6.4e-27  Score=181.48  Aligned_cols=147  Identities=14%  Similarity=0.066  Sum_probs=125.9

Q ss_pred             ccCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCC---HHHHHHHHHccCCCCcccccCCCc
Q 037194           52 LCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQ---TSFVQQLLTFMDPEDLMLQDENGN  128 (215)
Q Consensus        52 ~~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~---~~~v~~Ll~~~~~~~~~~~~~~g~  128 (215)
                      ....|+||||+|+..|+.++++.|++.| ....  .++..|+||||+|+..|+   .++++.|++.+ ..+++.+|..|+
T Consensus       127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G-ad~n--~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~-~~~~~~~d~~g~  202 (327)
T 1sw6_A          127 VDEHGNTPLHWLTSIANLELVKHLVKHG-SNRL--YGDNMGESCLVKAVKSVNNYDSGTFEALLDYL-YPCLILEDSMNR  202 (327)
T ss_dssp             CSTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTT--BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHH-GGGGGEECTTCC
T ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCC--CcCCCCCCHHHHHHHhcccccHHHHHHHHHhh-hccccCCCCCCC
Confidence            3468999999999999999999999998 5443  578899999999999998   67788888873 367999999999


Q ss_pred             hhhHHHHh----cCcHHHHHHHHHhCC---------------------------------------------CCCCCCCC
Q 037194          129 TAFCFAAA----VGAVDIANLMLKKNP---------------------------------------------SLLGIRGS  159 (215)
Q Consensus       129 t~l~~a~~----~~~~~~~~~Ll~~~~---------------------------------------------~~~~~~~~  159 (215)
                      ||||+|+.    .|+.+++++|++.+.                                             + ++..|.
T Consensus       203 tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~-~n~~d~  281 (327)
T 1sw6_A          203 TILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM-LNAQDS  281 (327)
T ss_dssp             CHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHT-TTCCCT
T ss_pred             CHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhC-CCCCCC
Confidence            99999999    899999999998742                                             3 577888


Q ss_pred             CCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhc
Q 037194          160 KNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDT  203 (215)
Q Consensus       160 ~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~  203 (215)
                      .|+||||+|+..|+.+++++|+++|+ ....+..|.||++.|+..
T Consensus       282 ~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~  326 (327)
T 1sw6_A          282 NGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGL  326 (327)
T ss_dssp             TSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence            89999999999999999999999998 777777888888877654

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.94  E-value=6.8e-26  Score=159.18  Aligned_cols=126  Identities=19%  Similarity=0.205  Sum_probs=118.5

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.+|..|.||||+
T Consensus        34 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~  108 (167)
T 3v31_A           34 EEGFTPLMWAAAHGQIAVVEFLLQNG-ADP--QLLGKGRESALSLACSKGYTDIVKMLLDC--GVDVNEYDWNGGTPLLY  108 (167)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTSCCHHHH
T ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHcC-CCC--CCcCCCCCcHHHHHHHcCCHHHHHHHHHC--CCCCCcCCCCCCCHHHH
Confidence            57889999999999999999999998 443  34688899999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |+..++.+++++|++.|++ ++..+..|.|||++|+..|+.+++++|++++.
T Consensus       109 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~  159 (167)
T 3v31_A          109 AVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIESHLL  159 (167)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence            9999999999999999999 79999999999999999999999999999876

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.94  E-value=2.8e-26  Score=173.91  Aligned_cols=154  Identities=12%  Similarity=0.134  Sum_probs=139.9

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCC-CcccccCCCchhhHHHH
Q 037194           57 RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPE-DLMLQDENGNTAFCFAA  135 (215)
Q Consensus        57 ~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~-~~~~~~~~g~t~l~~a~  135 (215)
                      ++++|.|+..|+.+.++.++..+ ........|..|.||||+|+..|+.+++++|++.  +. +++..+..|.||||+|+
T Consensus        77 ~~~l~~a~~~~~~~~~~~l~~~~-~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~g~tpL~~a~  153 (276)
T 4hbd_A           77 RSDAHPELVRRHLVTFRAMSARL-LDYVVNIADSNGNTALHYSVSHANFPVVQQLLDS--GVCKVDKQNRAGYSPIMLTA  153 (276)
T ss_dssp             STTCCHHHHHHHHHHHHHHCHHH-HHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--SCCCTTCCCTTSCCHHHHGG
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHH-HhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHC--CCCcCCCCCCCCCCHHHHHH
Confidence            35678899999999999999887 4444446899999999999999999999999999  76 99999999999999999


Q ss_pred             -----hcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHH
Q 037194          136 -----AVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKY  209 (215)
Q Consensus       136 -----~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~  209 (215)
                           ..++.+++++|++.|.. ....+..|+||||+|+..|+.+++++|+++|+ ....+..|.||++.|+..|+.+++
T Consensus       154 ~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv  232 (276)
T 4hbd_A          154 LATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIA  232 (276)
T ss_dssp             GCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred             HHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence                 66889999999999988 68888899999999999999999999999999 777788899999999999999999


Q ss_pred             HHhhc
Q 037194          210 QDIFK  214 (215)
Q Consensus       210 ~~ll~  214 (215)
                      ++||+
T Consensus       233 ~~Ll~  237 (276)
T 4hbd_A          233 GLLLA  237 (276)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            99986

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.94  E-value=2.5e-26  Score=161.06  Aligned_cols=125  Identities=21%  Similarity=0.176  Sum_probs=115.0

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +++++.+|..|+||||+
T Consensus        40 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~  114 (165)
T 3twr_A           40 GRQSTPLHFAAGYNRVSVVEYLLQHG-ADV--HAKDKGGLVPLHNACSYGHYEVAELLVKH--GAVVNVADLWKFTPLHE  114 (165)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHH
T ss_pred             cCCCCHHHHHHHcChHHHHHHHHhcC-CCC--CccCCCCCCHHHHHHHcCcHHHHHHHHhC--CCCCCCcCCCCCCHHHH
Confidence            46789999999999999999999998 443  35788999999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |+..++.+++++|++.|++ ++..|..|.|||++|+. ++.+++++|+++|+
T Consensus       115 A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA  164 (165)
T 3twr_A          115 AAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA  164 (165)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred             HHHcCCHHHHHHHHHcCCC-CcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence            9999999999999999999 79999999999999876 99999999999875

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.94  E-value=7.4e-26  Score=162.53  Aligned_cols=125  Identities=15%  Similarity=0.148  Sum_probs=117.5

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||+|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +++++.+|..|.||||+
T Consensus        66 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~  140 (192)
T 2rfm_A           66 IEGSTALIWAVKNNRLGIAEKLLSKG-SNV--NTKDFSGKTPLMWSIIFGYSEMSYFLLEH--GANVNDRNLEGETPLIV  140 (192)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHHT-CCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTCCCHHHH
T ss_pred             ccCccHHHHHHHcCCHHHHHHHHHCC-CCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHH
Confidence            46889999999999999999999998 443  35688999999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKS  184 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~  184 (215)
                      |+..++.+++++|++.|++ ++..|..|.|||++|+..|+.+++++|++++
T Consensus       141 A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~  190 (192)
T 2rfm_A          141 ASKYGRSEIVKKLLELGAD-ISARDLTGLTAEASARIFGRQEVIKIFTEVR  190 (192)
T ss_dssp             HHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence            9999999999999999999 7999999999999999999999999999875

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.93  E-value=7.4e-27  Score=172.41  Aligned_cols=127  Identities=21%  Similarity=0.200  Sum_probs=117.2

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      ..+|.++||.|+..|+.++++.|++.+ ...  ...+..|+||||+|+..|+.+++++|++.  |++++.+|..|+||||
T Consensus        18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~--~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~--ga~~n~~d~~g~tpLh   92 (229)
T 2vge_A           18 RLNPLVLLLDAALTGELEVVQQAVKEM-NDP--SQPNEEGITALHNAICGANYSIVDFLITA--GANVNSPDSHGWTPLH   92 (229)
T ss_dssp             TSCHHHHHHHHHHHTCHHHHHHHHHHS-SCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHH
T ss_pred             ccchhHHHHHHHHcCCHHHHHHHHhcC-CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHH
Confidence            356789999999999999999999998 443  35788999999999999999999999999  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCC-CCCCCHHHHH--HHhCCHHHHHHHhhcCC
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRG-SKNMPPLYFA--ALFGQTDTASFLFHKSE  185 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~a--~~~g~~~~v~~Ll~~~~  185 (215)
                      +|+..|+.+++++|++.|++ ++..+ ..|.||||+|  +..|+.+++++|+++|+
T Consensus        93 ~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga  147 (229)
T 2vge_A           93 CAASCNDTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLADVEQ  147 (229)
T ss_dssp             HHHHTTCHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCC
Confidence            99999999999999999999 67775 6999999999  99999999999999876

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.93  E-value=2.6e-25  Score=148.72  Aligned_cols=122  Identities=20%  Similarity=0.311  Sum_probs=115.2

Q ss_pred             CCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 037194           91 GHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAAL  170 (215)
Q Consensus        91 ~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~  170 (215)
                      +|.||||+|+..|+.+++++|++.  +.+++.++..|.||||+|+..++.+++++|++.|++ ++..+..|.||||+|+.
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~   77 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAAR   77 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHH
Confidence            489999999999999999999999  899999999999999999999999999999999999 79999999999999999


Q ss_pred             hCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          171 FGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       171 ~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      .|+.+++++|+++|+ ....+..+.++++.|+..+..+++++|+++
T Consensus        78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~  123 (126)
T 1n0r_A           78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA  123 (126)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence            999999999999998 666778889999999999999999999863

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.93  E-value=1.3e-25  Score=156.12  Aligned_cols=125  Identities=15%  Similarity=0.107  Sum_probs=115.4

Q ss_pred             hcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCC-HH
Q 037194           87 AITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMP-PL  165 (215)
Q Consensus        87 ~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t-~l  165 (215)
                      ..+..|.||||+|+..|+.+++++|++.  +.+++.++..|+||||+|+ .|+.+++++|++.|++ ++..+..|.| ||
T Consensus         7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~ttpL   82 (156)
T 1bi7_B            7 SSMEPSADWLATAAARGRVEEVRALLEA--GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPV   82 (156)
T ss_dssp             ---CCSTTHHHHHHHHTCHHHHHHHHTT--TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHH
T ss_pred             CCCccchHHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcHHH
Confidence            3577899999999999999999999999  9999999999999999985 8999999999999999 7999999999 99


Q ss_pred             HHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          166 YFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       166 ~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      |+|+..|+.+++++|+++|+ ....+..+.++++.|+..++.+++++|+++
T Consensus        83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~  133 (156)
T 1bi7_B           83 HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA  133 (156)
T ss_dssp             HHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC
T ss_pred             HHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc
Confidence            99999999999999999998 677778899999999999999999999864

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.93  E-value=2e-25  Score=154.99  Aligned_cols=122  Identities=16%  Similarity=0.186  Sum_probs=113.9

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||. +..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  |.+++.+|..|+||||+
T Consensus        34 ~~g~t~L~~-~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~  107 (156)
T 1bd8_A           34 RFGKTALQV-MMFGSTAIALELLKQG-ASP--NVQDTSGTSPVHDAARTGFLDTLKVLVEH--GADVNVPDGTGALPIHL  107 (156)
T ss_dssp             TTSCCHHHH-SCTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTSCCHHHH
T ss_pred             CCCCcHHHH-HHcCCHHHHHHHHHCC-CCC--CCcCCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCcHHHH
Confidence            468899999 9999999999999998 443  35788999999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhc
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHK  183 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~  183 (215)
                      |+..|+.+++++|++. ++ ++..|..|.||||+|+..|+.+++++|+++
T Consensus       108 A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A          108 AVQEGHTAVVSFLAAE-SD-LHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHTCHHHHHHHHTT-SC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             HHHhChHHHHHHHHhc-cC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            9999999999999999 77 799999999999999999999999999875

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.93  E-value=8e-25  Score=170.17  Aligned_cols=155  Identities=23%  Similarity=0.347  Sum_probs=138.3

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .|.|+|+.|+..|++++|+.||+.| ..+.. ..+..|+||||+|+..|+.++|++|++.  |++++.++..+.++++.+
T Consensus        24 ~~~t~L~~Av~~g~~~~V~~LL~~G-advn~-~~~~~g~TpLh~A~~~g~~~iv~~Ll~~--ga~~~~~~~~~~~~~~~~   99 (337)
T 4g8k_A           24 EDNHLLIKAVQNEDVDLVQQLLEGG-ANVNF-QEEEGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATPFILA   99 (337)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHT-CCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHCC-CCCCc-cCCCCCcCHHHHHHHcCCHHHHHHHHHc--CCchhhhccCCCchhHHH
Confidence            4569999999999999999999998 54432 2345699999999999999999999999  999999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCC----------CCCCCchHHHHHHhc
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KEL----------PTEDRKVIFITSVDT  203 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~----------~~~~~~~~~~~a~~~  203 (215)
                      +..+...++..++..+++ ++..|..|.||+|+|+..|+.+++++|+++|+ ...          .+..|.|+++.|+..
T Consensus       100 ~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~  178 (337)
T 4g8k_A          100 AIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK  178 (337)
T ss_dssp             HHHTCHHHHHHHHTTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHH
T ss_pred             HhcccchhhHHhhhccch-hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHC
Confidence            999999999999999999 79999999999999999999999999999987 322          234577899999999


Q ss_pred             CchhHHHHhhc
Q 037194          204 GLYGKYQDIFK  214 (215)
Q Consensus       204 ~~~~~~~~ll~  214 (215)
                      |+.+++++||+
T Consensus       179 g~~~~v~~LL~  189 (337)
T 4g8k_A          179 GHVEVLKILLD  189 (337)
T ss_dssp             TCHHHHHHHHH
T ss_pred             CCHHHHHHHHh
Confidence            99999999984

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.93  E-value=1.3e-25  Score=159.48  Aligned_cols=127  Identities=20%  Similarity=0.175  Sum_probs=119.7

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      ...|+||||+|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +++++.+|..|.||||
T Consensus        36 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~  110 (179)
T 3f6q_A           36 DDHGFSPLHWACREGRSAVVEMLIMRG-ARI--NVMNRGDDTPLHLAASHGHRDIVQKLLQY--KADINAVNEHGNVPLH  110 (179)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHH
T ss_pred             CCCCCCHHHHHHHcCcHHHHHHHHHcC-CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHH
Confidence            357889999999999999999999998 443  34688999999999999999999999999  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      +|+..++.+++++|++.|++ ++..|..|.|||++|+..++.+++++|++.|+
T Consensus       111 ~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~  162 (179)
T 3f6q_A          111 YACFWGQDQVAEDLVANGAL-VSICNKYGEMPVDKAKAPLRELLRERAEKMGQ  162 (179)
T ss_dssp             HHHHTTCHHHHHHHHHTTCC-SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred             HHHHcCCHHHHHHHHHCCCC-cchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999 79999999999999999999999999999998

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.93  E-value=2.5e-26  Score=156.37  Aligned_cols=125  Identities=19%  Similarity=0.164  Sum_probs=93.1

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+|+||+|+..|+.+++++|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +.+++.+|..|.||||+
T Consensus         8 ~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~   82 (137)
T 3c5r_A            8 HRGETLLHIASIKGDIPSVEYLLQNG-SDP--NVKDHAGWTPLHEACNHGHLKVVELLLQH--KALVNTTGYQNDSPLHD   82 (137)
T ss_dssp             TTCCCHHHHHHHHTCHHHHHHHHHTT-CCS--CCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCGGGCCHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcC-CCC--CcCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCcccCcCCCCCCHHHH
Confidence            46778888888888888888888776 332  24567778888888888888888888877  77777778788888888


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKS  184 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~  184 (215)
                      |+..++.+++++|++.|++ ++..|..|.|||++|+..+..+++++|.+.+
T Consensus        83 A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~  132 (137)
T 3c5r_A           83 AAKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEKNE  132 (137)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred             HHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence            8888888888888888777 6777778888888887777777776665543

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.93  E-value=4.2e-25  Score=157.55  Aligned_cols=139  Identities=19%  Similarity=0.217  Sum_probs=121.7

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCccccc-CCCchhhH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQD-ENGNTAFC  132 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~l~  132 (215)
                      ..|.||||.|+..|+.+.++.|++ + ...  ...+..|+||||+|+..|+.+++++|++.  +++++.++ ..|+||||
T Consensus        42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~--~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~~g~tpL~  115 (183)
T 3deo_A           42 SEYETPWWTAARKADEQALSQLLE-D-RDV--DAVDENGRTALLFVAGLGSDKCVRLLAEA--GADLDHRDMRGGLTALH  115 (183)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHTT-T-SCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCSSSSCCHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHh-c-CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCCHHH
Confidence            467899999999999999999999 6 333  35788999999999999999999999999  99999998 88999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCCCCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      +|+..|+.+++++|++.|++ ++..|..|.||||+|+..++.                ....++++.++..|..+++++|
T Consensus       116 ~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~----------------~~~~~~l~~a~~~~~~~i~~~L  178 (183)
T 3deo_A          116 MAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREILKT----------------TPKGNPMQFGRRIGLEKVINVL  178 (183)
T ss_dssp             HHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHHT----------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhccC----------------cccccHHHHHHHcCHHHHHHHH
Confidence            99999999999999999999 799999999999999864322                2235677888888899999888


Q ss_pred             hcC
Q 037194          213 FKR  215 (215)
Q Consensus       213 l~~  215 (215)
                      .++
T Consensus       179 ~~~  181 (183)
T 3deo_A          179 EGQ  181 (183)
T ss_dssp             HTC
T ss_pred             HHh
Confidence            764

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.93  E-value=1.8e-25  Score=149.36  Aligned_cols=109  Identities=20%  Similarity=0.248  Sum_probs=83.5

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      .|.++||+|+..|+.+.++.|++.+ ...  ...+..|+||||+|+..|+.+++++|++.  +++++.+|..|+||||+|
T Consensus         6 ~~~~~l~~A~~~~~~~~v~~ll~~~-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~tpL~~A   80 (123)
T 3aaa_C            6 MCDKEFMWALKNGDLDEVKDYVAKG-EDV--NRTLEGGRKPLHYAADCGQLEILEFLLLK--GADINAPDKHHITPLLSA   80 (123)
T ss_dssp             -CHHHHHHHHHTTCHHHHHHHHHTT-CCT--TSCCTTSSCHHHHHHHTTCHHHHHHHHTT--TCCTTCCCTTSCCHHHHH
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHcC-CCc--CccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHH
Confidence            4567788888888888888888776 332  24567788888888888888888888877  777887888888888888


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAA  169 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~  169 (215)
                      +..++.+++++|++.|++ ++..|..|.||||+|.
T Consensus        81 ~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~  114 (123)
T 3aaa_C           81 VYEGHVSCVKLLLSKGAD-KTVKGPDGLTAFEATD  114 (123)
T ss_dssp             HHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCC
T ss_pred             HHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHhC
Confidence            888888888888888777 6777778888888873

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.93  E-value=1.4e-25  Score=152.66  Aligned_cols=124  Identities=20%  Similarity=0.152  Sum_probs=113.9

Q ss_pred             hcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHH
Q 037194           87 AITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLY  166 (215)
Q Consensus        87 ~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~  166 (215)
                      .++..|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..++.+++++|++.|++ ++..|..|.||||
T Consensus         5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~   81 (137)
T 3c5r_A            5 FTNHRGETLLHIASIKGDIPSVEYLLQN--GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLH   81 (137)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHH
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHH
Confidence            4688999999999999999999999999  999999999999999999999999999999999999 7999999999999


Q ss_pred             HHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhh
Q 037194          167 FAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIF  213 (215)
Q Consensus       167 ~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll  213 (215)
                      +|+..|+.+++++|+++|+ ....+..|.+|++.|...+..++..+|.
T Consensus        82 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~  129 (137)
T 3c5r_A           82 DAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPE  129 (137)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcc
Confidence            9999999999999999998 7777888889999888877777766554

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.92  E-value=1.2e-25  Score=165.96  Aligned_cols=139  Identities=17%  Similarity=0.099  Sum_probs=116.0

Q ss_pred             HHHHHhhcchhhh-hhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhC
Q 037194           72 IEGLFEKDYRSII-CAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKN  150 (215)
Q Consensus        72 ~~~ll~~~~~~~~-~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~  150 (215)
                      ++.|++++ ..+. ....+..+.|+||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..|+.+++++|++.|
T Consensus         1 v~~ll~~~-~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g   77 (229)
T 2vge_A            1 MRSVLRKA-GSPRKARRARLNPLVLLLDAALTGELEVVQQAVKE--MNDPSQPNEEGITALHNAICGANYSIVDFLITAG   77 (229)
T ss_dssp             ----------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             CeehhccC-CCCccccccccchhHHHHHHHHcCCHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence            35677776 3322 123456788899999999999999999999  8999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCC-CCCCCchHHHHH--HhcCchhHHHHhhc
Q 037194          151 PSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KEL-PTEDRKVIFITS--VDTGLYGKYQDIFK  214 (215)
Q Consensus       151 ~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~-~~~~~~~~~~~a--~~~~~~~~~~~ll~  214 (215)
                      ++ ++..|..|.||||+|+..|+.+++++|++.|+ ... ++..|.++++.|  +..++.+++++||+
T Consensus        78 a~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~  144 (229)
T 2vge_A           78 AN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLAD  144 (229)
T ss_dssp             CC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH
T ss_pred             CC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHH
Confidence            99 79999999999999999999999999999998 444 446788888888  89999999999986

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.92  E-value=5.5e-25  Score=168.63  Aligned_cols=141  Identities=17%  Similarity=0.163  Sum_probs=119.9

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhhcchhhhhh----hcCCCCccHHHHHHhc---CCHHHHHHHHHccCCCCcccccCCCc
Q 037194           56 ERLLLYKAALKGEMKEIEGLFEKDYRSIICA----AITEGHQTVLHVATGA---KQTSFVQQLLTFMDPEDLMLQDENGN  128 (215)
Q Consensus        56 g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~----~~~~~g~~~L~~a~~~---g~~~~v~~Ll~~~~~~~~~~~~~~g~  128 (215)
                      +.++|+.|+..|+.+.++.|+..+ ......    ..+..|.||||+|+..   |+.+++++|++.  |++++.+|..|+
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~g-~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~--gadvn~~d~~G~  227 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFANG-QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN--GGHLDAKAADGN  227 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH--SSCTTCCCTTCC
T ss_pred             hHHHHhhhhhccCHHHHHHHHhcC-CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc--CCCCCCCCCCCC
Confidence            457899999999999999999988 443210    0477899999999997   899999999999  999999999999


Q ss_pred             hhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCCCCCCCCCCchHHHHHHhcCc
Q 037194          129 TAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGL  205 (215)
Q Consensus       129 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~a~~~~~  205 (215)
                      ||||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|++.|+.     .+.++++.|+..|+
T Consensus       228 TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g~tpLh~A~~~g~  298 (301)
T 2b0o_E          228 TALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG-----TFAFPLHVDYSWVI  298 (301)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----TTSSCCC-------
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----CCCChhHHHHhcCC
Confidence            999999999999999999999999 799999999999999999999999999999863     24667777777664

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.92  E-value=6.7e-25  Score=163.43  Aligned_cols=138  Identities=20%  Similarity=0.215  Sum_probs=120.0

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCccccc-CCCchhhH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQD-ENGNTAFC  132 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~l~  132 (215)
                      ..|.||||.|+..|+.++++.|++ + ...  ...+..|+||||+|+..|+.+++++|++.  +++++.++ ..|+||||
T Consensus        43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~g~t~L~  116 (244)
T 3ui2_A           43 SEYETPWWTAARKADEQALSQLLE-D-RDV--DAVDENGRTALLFVAGLGSDKCVRLLAEA--GADLDHRDMRGGLTALH  116 (244)
T ss_dssp             HHHHHHHHHHHTTTCHHHHHHTTT-T-CCT--TCBCTTSCBHHHHHHHHTCHHHHHHHHHT--TCCTTCCCSSSCCCHHH
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHc-C-CCC--CCcCCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCcCCCCCCCCHHH
Confidence            367899999999999999999999 6 333  35788999999999999999999999999  99999998 78999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCCCCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      +|+..|+.+++++|++.|++ ++..|..|.||||+|+..+.                ...+.++++.++..|+.+++.+|
T Consensus       117 ~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~~~----------------~~~~~~~l~~a~~~g~~~iv~~L  179 (244)
T 3ui2_A          117 MAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREILK----------------TTPKGNPMQFGRRIGLEKVINVL  179 (244)
T ss_dssp             HHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHHT----------------TCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHHHh----------------ccCCCCHHHHHHHcChHHHHHHH
Confidence            99999999999999999999 79999999999999985321                13356677777788888888887


Q ss_pred             hc
Q 037194          213 FK  214 (215)
Q Consensus       213 l~  214 (215)
                      ++
T Consensus       180 ~~  181 (244)
T 3ui2_A          180 EG  181 (244)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.92  E-value=2.1e-25  Score=163.72  Aligned_cols=127  Identities=20%  Similarity=0.161  Sum_probs=110.8

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.|+||+|+..|+.++++.|++.+ ...  ...+..|+||||+|+..|+.+++++|++.. +++++.+|..|+||||+
T Consensus        71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-g~~~~~~d~~g~tpL~~  146 (222)
T 3ehr_A           71 ESIDNPLHEAAKRGNLSWLRECLDNR-VGV--NGLDKAGSTALYWACHGGHKDIVEMLFTQP-NIELNQQNKLGDTALHA  146 (222)
T ss_dssp             EEESCHHHHHHHHTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHTTST-TCCCCCCCTTSCCHHHH
T ss_pred             cccccccccccccCcHHHHHHHHhCC-CCc--cccCCCCCCHHHHHHHcCCHHHHHHHHcCC-CCCccccCCCCCCHHHH
Confidence            35679999999999999999999988 443  356889999999999999999999999863 78999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |+..|+.+++++|++.|++ ++..|..|.|||++|+..++.++++.|++.++
T Consensus       147 A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~  197 (222)
T 3ehr_A          147 AAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDA  197 (222)
T ss_dssp             HHHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred             HHHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence            9999999999999999999 79999999999999999999999999999988

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.92  E-value=1.1e-25  Score=167.20  Aligned_cols=126  Identities=21%  Similarity=0.239  Sum_probs=115.7

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.|+||.|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +++++.+|..|+||||+
T Consensus        35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~tpL~~  109 (239)
T 1ycs_B           35 PLPLALLLDSSLEGEFDLVQRIIYEV-DDP--SLPNDEGITALHNAVCAGHTEIVKFLVQF--GVNVNAADSDGWTPLHC  109 (239)
T ss_dssp             --CHHHHHHHHHHTCHHHHHHHTSTT-SSC--CCCCTTSCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTCCCHHHH
T ss_pred             chhhHHHHHHHHcCCHHHHHHHHHcC-CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHH
Confidence            46789999999999999999999998 433  35788999999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCC-CHHHHH--HHhCCHHHHHHHhhcCC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNM-PPLYFA--ALFGQTDTASFLFHKSE  185 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~-t~l~~a--~~~g~~~~v~~Ll~~~~  185 (215)
                      |+..|+.+++++|++.|++ ++..+..|. ||||+|  +..|+.+++++|++.++
T Consensus       110 A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a  163 (239)
T 1ycs_B          110 AASCNNVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE  163 (239)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCC-cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhh
Confidence            9999999999999999999 688887777 999999  78899999999999987

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.92  E-value=1.5e-24  Score=144.85  Aligned_cols=110  Identities=19%  Similarity=0.240  Sum_probs=101.9

Q ss_pred             CCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 037194           89 TEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFA  168 (215)
Q Consensus        89 ~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a  168 (215)
                      +..|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..++.+++++|++.|++ ++..|..|+||||+|
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A   80 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAK--GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSA   80 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHc--CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHH
Confidence            56788999999999999999999998  899999999999999999999999999999999999 799999999999999


Q ss_pred             HHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHH
Q 037194          169 ALFGQTDTASFLFHKSE-KELPTEDRKVIFITSV  201 (215)
Q Consensus       169 ~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~  201 (215)
                      +..|+.+++++|+++|+ ....+..+.++++.|.
T Consensus        81 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~  114 (123)
T 3aaa_C           81 VYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD  114 (123)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred             HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence            99999999999999998 6777888889999883

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.92  E-value=3.9e-24  Score=135.81  Aligned_cols=92  Identities=25%  Similarity=0.398  Sum_probs=86.5

Q ss_pred             CCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 037194           91 GHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAAL  170 (215)
Q Consensus        91 ~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~  170 (215)
                      +|+||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..++.+++++|++.|++ ++..|..|.||||+|+.
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~   77 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAAR   77 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHH
Confidence            478999999999999999999999  999999999999999999999999999999999999 79999999999999999


Q ss_pred             hCCHHHHHHHhhcCC
Q 037194          171 FGQTDTASFLFHKSE  185 (215)
Q Consensus       171 ~g~~~~v~~Ll~~~~  185 (215)
                      .|+.+++++|+++|+
T Consensus        78 ~~~~~~~~~Ll~~ga   92 (93)
T 1n0q_A           78 NGHLEVVKLLLEAGA   92 (93)
T ss_dssp             TTCHHHHHHHHHTTC
T ss_pred             cCCHHHHHHHHHcCC
Confidence            999999999999885

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.91  E-value=8.7e-24  Score=160.24  Aligned_cols=125  Identities=18%  Similarity=0.219  Sum_probs=115.6

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcchhhh----hhhcCCCCccHHHHHHhc---CCHHHHHHHHHccCCCCcccccCCCch
Q 037194           57 RLLLYKAALKGEMKEIEGLFEKDYRSII----CAAITEGHQTVLHVATGA---KQTSFVQQLLTFMDPEDLMLQDENGNT  129 (215)
Q Consensus        57 ~~~L~~a~~~g~~~~~~~ll~~~~~~~~----~~~~~~~g~~~L~~a~~~---g~~~~v~~Ll~~~~~~~~~~~~~~g~t  129 (215)
                      .++|+.|+..|+.+.++.++..+ ....    ....+..|.||||+|+..   |+.+++++|++.  |++++.+|..|+|
T Consensus       131 l~~l~~a~~~~d~~~~~~ll~~g-~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~--ga~in~~d~~g~T  207 (278)
T 1dcq_A          131 LHSLCEAVKTRDIFGLLQAYADG-VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN--SGNLDKQTGKGST  207 (278)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTT-CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH--CSCTTCCCTTCCC
T ss_pred             hhhhhhHhhhcccHHHHHHHHhh-cchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC--CCCccccCCCCCC
Confidence            47899999999999999999998 4432    123477899999999999   899999999999  9999999999999


Q ss_pred             hhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          130 AFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       130 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+
T Consensus       208 pLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga  262 (278)
T 1dcq_A          208 ALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALS  262 (278)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            99999999999999999999999 79999999999999999999999999999987

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.91  E-value=1.3e-24  Score=155.28  Aligned_cols=126  Identities=13%  Similarity=0.058  Sum_probs=112.7

Q ss_pred             CcccHHHHHHHHcCCH----HHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCC------HHHHHHHHHccCCCCcccc
Q 037194           54 CSERLLLYKAALKGEM----KEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQ------TSFVQQLLTFMDPEDLMLQ  123 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~----~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~------~~~v~~Ll~~~~~~~~~~~  123 (215)
                      ..|+||||+|+..|+.    ++++.|++.| ..+  ..++..|+||||+|+..|+      .+++++|++.  |++++.+
T Consensus        36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G-adv--n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~--Gadin~~  110 (186)
T 3t8k_A           36 VLKSNILYDVLRNNNDEARYKISMFLINKG-ADI--KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK--GADITAL  110 (186)
T ss_dssp             HHTTTHHHHHTTCSCHHHHHHHHHHHHHTT-CCS--SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT--TCCSSSC
T ss_pred             cCCCCHHHHHHHcCCcchHHHHHHHHHHCC-CCC--CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC--CCCCCcc
Confidence            4688999999999985    5899999998 444  3578999999999999987      5789999999  9999999


Q ss_pred             cCCCc-hhhHHHHhcC-----cHHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          124 DENGN-TAFCFAAAVG-----AVDIANLMLK-KNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       124 ~~~g~-t~l~~a~~~~-----~~~~~~~Ll~-~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |..|. ||||+|+..+     ..+++++|++ .|++ ++..|..|.||||+|+..|+.+++++|.+...
T Consensus       111 d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad-~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~  178 (186)
T 3t8k_A          111 YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-LLIKDKWGLTALEFVKRCQKPIALKMMEDYIK  178 (186)
T ss_dssp             BGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred             CCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence            99999 9999999944     4679999999 9999 89999999999999999999999999998754

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.91  E-value=1.9e-26  Score=181.40  Aligned_cols=152  Identities=19%  Similarity=0.176  Sum_probs=125.3

Q ss_pred             ccCcccHHHHHHHHcCCHHHHHHHHhhcchhh-hhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCC---cccccCCC
Q 037194           52 LCCSERLLLYKAALKGEMKEIEGLFEKDYRSI-ICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED---LMLQDENG  127 (215)
Q Consensus        52 ~~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~-~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~---~~~~~~~g  127 (215)
                      ...+++||||.|+..|+.+++++|++.+ ... .....+..|.||||+|+..|+.++|++|++.  +++   .+..+.. 
T Consensus        88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~g-a~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~--gad~~~~~i~~~~-  163 (376)
T 2aja_A           88 KGIKSEVICFVAAITGCSSALDTLCLLL-TSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL--APTEIMAMIQAEN-  163 (376)
T ss_dssp             HTCCHHHHHHHHHHHCCHHHHHHHTTC---CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS--CTTTHHHHHSHHH-
T ss_pred             cCCCcCCHHHHHHHcCCHHHHHHHHHcC-CcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC--CCCccccccCCCC-
Confidence            3456679999999999999999999998 311 1012344578899999999999999999999  765   2333333 


Q ss_pred             chhhHHHHhcCcHHHHHHHHHhCCCCCCC--CCCCCCCHHHHHH-HhCCHHHHHHHhhcCCCCCCCCCCchHHHHHHhcC
Q 037194          128 NTAFCFAAAVGAVDIANLMLKKNPSLLGI--RGSKNMPPLYFAA-LFGQTDTASFLFHKSEKELPTEDRKVIFITSVDTG  204 (215)
Q Consensus       128 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~--~~~~g~t~l~~a~-~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~a~~~~  204 (215)
                      +||||+|+..|+.+++++|++.|++ ++.  .|..|.||||+|+ ..|+.++|++|++.|+      .+.++++.|+..|
T Consensus       164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga------~~~taL~~Aa~~g  236 (376)
T 2aja_A          164 YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV------MLAYAEIHEFEYG  236 (376)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH------HHHHHHHCTTTTT
T ss_pred             CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC------ccchHHHHHHHCC
Confidence            9999999999999999999999998 565  7788999999999 9999999999999763      2678899999999


Q ss_pred             chhHHHHhhc
Q 037194          205 LYGKYQDIFK  214 (215)
Q Consensus       205 ~~~~~~~ll~  214 (215)
                      +.+++++|++
T Consensus       237 ~~evv~lL~~  246 (376)
T 2aja_A          237 EKYVNPFIAR  246 (376)
T ss_dssp             TTTHHHHHHH
T ss_pred             CHHHHHHHHh
Confidence            9999999875

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.91  E-value=1.1e-24  Score=168.99  Aligned_cols=152  Identities=13%  Similarity=0.079  Sum_probs=126.4

Q ss_pred             HHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcC
Q 037194           59 LLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVG  138 (215)
Q Consensus        59 ~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~  138 (215)
                      .+|.|+..+..++++.|++.+ ... +...+..|+||||+|+..|+.++|++|++.  |++++.+|..|+||||+|+..|
T Consensus       100 ~~~~a~~~~~~~~~~~l~~~g-~dv-n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~--Gad~n~~d~~g~TpLh~A~~~g  175 (327)
T 1sw6_A          100 QQHVSFDSLLQEVNDAFPNTQ-LNL-NIPVDEHGNTPLHWLTSIANLELVKHLVKH--GSNRLYGDNMGESCLVKAVKSV  175 (327)
T ss_dssp             ----CHHHHHHHHHHHCTTSC-CCS-CSCCSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTBCCTTCCCHHHHHHHSS
T ss_pred             hhHHHHHhhHHHHHHHHHhcC-CCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHhc
Confidence            346677777777788888776 332 212688999999999999999999999999  9999999999999999999999


Q ss_pred             c---HHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHH----hCCHHHHHHHhhcCC-------------------------
Q 037194          139 A---VDIANLMLKKN-PSLLGIRGSKNMPPLYFAAL----FGQTDTASFLFHKSE-------------------------  185 (215)
Q Consensus       139 ~---~~~~~~Ll~~~-~~~~~~~~~~g~t~l~~a~~----~g~~~~v~~Ll~~~~-------------------------  185 (215)
                      +   .++++.|++.+ ++ ++..|..|+||||+|+.    .|+.+++++|++.+.                         
T Consensus       176 ~~~~~~~~~~ll~~~~~~-~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~  254 (327)
T 1sw6_A          176 NNYDSGTFEALLDYLYPC-LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDK  254 (327)
T ss_dssp             HHHHTTCHHHHHHHHGGG-GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------
T ss_pred             ccccHHHHHHHHHhhhcc-ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccc
Confidence            8   67778888876 55 78999999999999999    899999999998742                         


Q ss_pred             ---------------------CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          186 ---------------------KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       186 ---------------------~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                                           ....+..|.||+|.|+..|+.+++++||++
T Consensus       255 ~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~  305 (327)
T 1sw6_A          255 NGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDY  305 (327)
T ss_dssp             -----CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHT
T ss_pred             cccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence                                 334566788999999999999999999864

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.91  E-value=1.2e-23  Score=164.85  Aligned_cols=140  Identities=19%  Similarity=0.210  Sum_probs=115.5

Q ss_pred             ccHHHHHHHHc-CCHHHHHHHHhhcchhhhhhhcC--CCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           56 ERLLLYKAALK-GEMKEIEGLFEKDYRSIICAAIT--EGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        56 g~~~L~~a~~~-g~~~~~~~ll~~~~~~~~~~~~~--~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      +.++||.|+.. |++++++.|++.+ ....  ..+  ..|.||||+|+..|+.+++++|++.  +++++.+|..|+||||
T Consensus       199 ~~t~L~~Aa~~~g~~~~v~~LL~~G-advn--~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~--Gadvn~~d~~G~TpLh  273 (368)
T 3jue_A          199 PGALLFRASGHPPSLPTMADALAHG-ADVN--WVNGGQDNATPLIQATAANSLLACEFLLQN--GANVNQADSAGRGPLH  273 (368)
T ss_dssp             HHHHHHHHTSSSCCHHHHHHHHHTT-CCTT--CCCTTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHH
T ss_pred             CCcHHHHHHHccCCHHHHHHHHHcC-CCCC--ccccccCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCCCCCCCCHHH
Confidence            45799999999 9999999999998 5443  344  7899999999999999999999999  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC----CCCCCCCCchHHHHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE----KELPTEDRKVIFITSV  201 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~----~~~~~~~~~~~~~~a~  201 (215)
                      +|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+..+.    ....+.++.+++..+.
T Consensus       274 ~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~  345 (368)
T 3jue_A          274 HATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR  345 (368)
T ss_dssp             HHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred             HHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence            99999999999999999999 79999999999999999999999999998876    2233444555555443

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.91  E-value=3e-24  Score=157.57  Aligned_cols=124  Identities=21%  Similarity=0.237  Sum_probs=113.2

Q ss_pred             cCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHh-CCCCCCCCCCCCCCHHH
Q 037194           88 ITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK-NPSLLGIRGSKNMPPLY  166 (215)
Q Consensus        88 ~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~  166 (215)
                      .+..|.||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..|+.+++++|++. |++ ++..|..|.||||
T Consensus        69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL~  145 (222)
T 3ehr_A           69 QAESIDNPLHEAAKRGNLSWLRECLDN--RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTALH  145 (222)
T ss_dssp             HEEEESCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHHH
T ss_pred             cccccccccccccccCcHHHHHHHHhC--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHHH
Confidence            466789999999999999999999998  999999999999999999999999999999998 888 7999999999999


Q ss_pred             HHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          167 FAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       167 ~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      +|+..|+.+++++|+++|+ ....+..+.++++.|+..+..++++.|++
T Consensus       146 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~  194 (222)
T 3ehr_A          146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQG  194 (222)
T ss_dssp             HHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----
T ss_pred             HHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhc
Confidence            9999999999999999999 77788889999999999988888888764

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*

Probab=99.90  E-value=4.9e-23  Score=168.03  Aligned_cols=125  Identities=18%  Similarity=0.204  Sum_probs=114.9

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcchhhhhh----hcCCCCccHHHHHHh---cCCHHHHHHHHHccCCCCcccccCCCch
Q 037194           57 RLLLYKAALKGEMKEIEGLFEKDYRSIICA----AITEGHQTVLHVATG---AKQTSFVQQLLTFMDPEDLMLQDENGNT  129 (215)
Q Consensus        57 ~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~----~~~~~g~~~L~~a~~---~g~~~~v~~Ll~~~~~~~~~~~~~~g~t  129 (215)
                      .+.|+.|+..|+.+.++.|++.| ......    ..+..|.||||+||.   .|+.+++++|++.  |+++|.+|..|+|
T Consensus       133 ~~~L~~A~~~g~~~~v~~ll~~g-~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~--ga~vn~~d~~g~T  209 (497)
T 3lvq_E          133 PQRLWTAICNRDLLSVLEAFANG-QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN--GGHLDAKAADGNT  209 (497)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTT-CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH--SCCTTCCCSSSCC
T ss_pred             HHHHHHHHhccCHHHHHHHHhhc-ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc--CCCCCccCCCCCc
Confidence            47799999999999999999998 443211    126789999999966   8999999999999  9999999999999


Q ss_pred             hhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          130 AFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       130 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+
T Consensus       210 pLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga  264 (497)
T 3lvq_E          210 ALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQA  264 (497)
T ss_dssp             HHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            99999999999999999999999 79999999999999999999999999999998

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.89  E-value=5.4e-23  Score=146.57  Aligned_cols=119  Identities=20%  Similarity=0.197  Sum_probs=106.6

Q ss_pred             CCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCC-CCCCCHHHH
Q 037194           89 TEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRG-SKNMPPLYF  167 (215)
Q Consensus        89 ~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~  167 (215)
                      +..|.||||+|+..|+.++++.|++   +.+++.+|..|+||||+|+..|+.+++++|++.|++ ++..+ ..|+||||+
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~  116 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHM  116 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT---TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh---cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHH
Confidence            4568899999999999999999998   689999999999999999999999999999999999 67777 889999999


Q ss_pred             HHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHH
Q 037194          168 AALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQD  211 (215)
Q Consensus       168 a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~  211 (215)
                      |+..|+.+++++|+++|+ ....+..|.+|++.|+..+..+....
T Consensus       117 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~  161 (183)
T 3deo_A          117 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGN  161 (183)
T ss_dssp             HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCS
T ss_pred             HHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCccccc
Confidence            999999999999999998 66777888889998887665544333

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.88  E-value=1e-22  Score=134.24  Aligned_cols=106  Identities=23%  Similarity=0.254  Sum_probs=93.0

Q ss_pred             hcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHH
Q 037194           87 AITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLY  166 (215)
Q Consensus        87 ~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~  166 (215)
                      .++..|+||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..++.+++++|++.|++ ++..|..|.||||
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~   80 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSK--GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEH   80 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTT--TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHH
Confidence            4678899999999999999999999998  899999999999999999999999999999999998 7889999999999


Q ss_pred             HHHHhCCHHHHHHHhhcCC-CCCCCCCCch
Q 037194          167 FAALFGQTDTASFLFHKSE-KELPTEDRKV  195 (215)
Q Consensus       167 ~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~  195 (215)
                      +|+..++.+++++|+++|+ ....+..+.+
T Consensus        81 ~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~  110 (115)
T 2l6b_A           81 LAKKNGHHEIVKLLDAKGADVNARSWGSSH  110 (115)
T ss_dssp             HHHTTTCHHHHHHHHTTSSSHHHHSCCCC-
T ss_pred             HHHHCCCHHHHHHHHHcCCCCCcCCccccc
Confidence            9999999999999999998 3333344443

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.87  E-value=5.3e-22  Score=125.89  Aligned_cols=93  Identities=27%  Similarity=0.364  Sum_probs=85.2

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a  134 (215)
                      +|+||||+|+..|+.+++++|++.+ ...  ..++..|+||||+|+..|+.+++++|++.  |++++.+|..|+||||+|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~--n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~t~l~~A   75 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAG-ADV--NAKDKNGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLA   75 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHH
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcC-CCC--cccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHH
Confidence            4789999999999999999999998 443  35788999999999999999999999999  999999999999999999


Q ss_pred             HhcCcHHHHHHHHHhCCC
Q 037194          135 AAVGAVDIANLMLKKNPS  152 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~  152 (215)
                      +..|+.+++++|++.|++
T Consensus        76 ~~~~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           76 ARNGHLEVVKLLLEAGAY   93 (93)
T ss_dssp             HHTTCHHHHHHHHHTTCC
T ss_pred             HHcCCHHHHHHHHHcCCC
Confidence            999999999999998874

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.87  E-value=1.6e-21  Score=152.82  Aligned_cols=123  Identities=14%  Similarity=0.172  Sum_probs=114.6

Q ss_pred             CCCCccHHHHHHhc-CCHHHHHHHHHccCCCCccccc--CCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHH
Q 037194           89 TEGHQTVLHVATGA-KQTSFVQQLLTFMDPEDLMLQD--ENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPL  165 (215)
Q Consensus        89 ~~~g~~~L~~a~~~-g~~~~v~~Ll~~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l  165 (215)
                      ...+.++||+|+.. |+.++++.|++.  |++++..+  ..|.||||+|+..|+.+++++|++.|++ ++..|..|.|||
T Consensus       196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~--Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpL  272 (368)
T 3jue_A          196 SLHPGALLFRASGHPPSLPTMADALAH--GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPL  272 (368)
T ss_dssp             -CCHHHHHHHHTSSSCCHHHHHHHHHT--TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred             cCCCCcHHHHHHHccCCHHHHHHHHHc--CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHH
Confidence            34567899999999 999999999999  99999988  8899999999999999999999999999 799999999999


Q ss_pred             HHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          166 YFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       166 ~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      |+|+..|+.+++++|+++|+ ....+..+.++++.|+..++.+++++|++
T Consensus       273 h~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~  322 (368)
T 3jue_A          273 HHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRL  322 (368)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence            99999999999999999999 77778889999999999999999999874

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.86  E-value=6.9e-22  Score=147.12  Aligned_cols=112  Identities=21%  Similarity=0.229  Sum_probs=101.8

Q ss_pred             CCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCC-CCCCCHHHH
Q 037194           89 TEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRG-SKNMPPLYF  167 (215)
Q Consensus        89 ~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~l~~  167 (215)
                      +..|.||||+|+..|+.+++++|++   +.+++.+|..|+||||+|+..|+.+++++|++.|++ ++..+ ..|+||||+
T Consensus        42 ~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~~  117 (244)
T 3ui2_A           42 VSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHM  117 (244)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHHHTTT---TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHH
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHH
Confidence            3458999999999999999999998   689999999999999999999999999999999999 67777 789999999


Q ss_pred             HHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcC
Q 037194          168 AALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTG  204 (215)
Q Consensus       168 a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~  204 (215)
                      |+..|+.+++++|+++|+ ....+..|.++++.|+..+
T Consensus       118 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~  155 (244)
T 3ui2_A          118 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL  155 (244)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH
Confidence            999999999999999998 6677778888888887543

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.86  E-value=8.4e-21  Score=145.38  Aligned_cols=120  Identities=13%  Similarity=0.133  Sum_probs=111.7

Q ss_pred             CccHHHHHHhcCCHHHHHHHHHccCCCCccc------ccCCCchhhHHHHhc---CcHHHHHHHHHhCCCCCCCCCCCCC
Q 037194           92 HQTVLHVATGAKQTSFVQQLLTFMDPEDLML------QDENGNTAFCFAAAV---GAVDIANLMLKKNPSLLGIRGSKNM  162 (215)
Q Consensus        92 g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~  162 (215)
                      ..++|+.|+..|+.+.++.|+..  +.+++.      .+..|.||||+|+..   ++.+++++|++.|++ ++..|..|.
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~  227 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGN  227 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCC
T ss_pred             hHHHHhhhhhccCHHHHHHHHhc--CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCC
Confidence            44679999999999999999998  888887      688999999999997   899999999999999 799999999


Q ss_pred             CHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          163 PPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       163 t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      ||||+|+..|+.+++++|+++|+ ....+..|.||++.|+..++.+++++|++
T Consensus       228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~  280 (301)
T 2b0o_E          228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ  280 (301)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            99999999999999999999999 77788889999999999999999999985

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.86  E-value=3.1e-23  Score=163.14  Aligned_cols=119  Identities=15%  Similarity=0.146  Sum_probs=102.1

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhh-hhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCccc--ccCCCchhh
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIIC-AAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLML--QDENGNTAF  131 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~-~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~--~~~~g~t~l  131 (215)
                      .|.+|||+|+..|+.+++++|++.+ +.... ...+.+ .||||+|+..|+.+++++|++.  |++++.  +|..|.|||
T Consensus       127 ~~~tpL~~Aa~~G~~eiv~~Ll~~g-ad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~--ga~~~~~~~d~~g~TpL  202 (376)
T 2aja_A          127 ENYQAFRLAAENGHLHVLNRLCELA-PTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCEL--APTEATAMIQAENYYAF  202 (376)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHSC-TTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHS--CGGGHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCC-CCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHc--CCccchhccCCCCCCHH
Confidence            5679999999999999999999998 53110 111222 8999999999999999999999  898887  888999999


Q ss_pred             HHHH-hcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          132 CFAA-AVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       132 ~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |+|+ ..|+.+++++|++.|+        .|.|||++|+..|+.+++++|+++|+
T Consensus       203 ~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga  249 (376)
T 2aja_A          203 RWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVN  249 (376)
T ss_dssp             HHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCc
Confidence            9999 9999999999998553        27899999999999999999998764

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*

Probab=99.86  E-value=7.8e-21  Score=155.03  Aligned_cols=121  Identities=12%  Similarity=0.117  Sum_probs=112.8

Q ss_pred             CccHHHHHHhcCCHHHHHHHHHccCCCCcccc------cCCCchhhHHHHh---cCcHHHHHHHHHhCCCCCCCCCCCCC
Q 037194           92 HQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQ------DENGNTAFCFAAA---VGAVDIANLMLKKNPSLLGIRGSKNM  162 (215)
Q Consensus        92 g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~g~  162 (215)
                      ..+.||.|+..|+.+.++.|++.  |.+++..      +..|+||||+|+.   .|+.+++++|++.|++ ++..|..|+
T Consensus       132 ~~~~L~~A~~~g~~~~v~~ll~~--g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~  208 (497)
T 3lvq_E          132 EPQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGN  208 (497)
T ss_dssp             CHHHHHHHHHHTCHHHHHHHHHT--TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSC
T ss_pred             cHHHHHHHHhccCHHHHHHHHhh--cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCC
Confidence            44679999999999999999999  8998877      8899999999966   8999999999999999 899999999


Q ss_pred             CHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          163 PPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       163 t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      ||||+|+..|+.+++++|+++|+ ....+..|.|+++.|+..|+.+++++|+++
T Consensus       209 TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~  262 (497)
T 3lvq_E          209 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA  262 (497)
T ss_dssp             CHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            99999999999999999999999 777888899999999999999999999864

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.86  E-value=8.9e-21  Score=143.70  Aligned_cols=119  Identities=14%  Similarity=0.108  Sum_probs=109.7

Q ss_pred             ccHHHHHHhcCCHHHHHHHHHccCCCC------cccccCCCchhhHHHHhc---CcHHHHHHHHHhCCCCCCCCCCCCCC
Q 037194           93 QTVLHVATGAKQTSFVQQLLTFMDPED------LMLQDENGNTAFCFAAAV---GAVDIANLMLKKNPSLLGIRGSKNMP  163 (215)
Q Consensus        93 ~~~L~~a~~~g~~~~v~~Ll~~~~~~~------~~~~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~t  163 (215)
                      .++|+.|+..|+.+.++.++..  +.+      ++..+..|.||||+|+..   ++.+++++|++.|++ ++..|..|.|
T Consensus       131 l~~l~~a~~~~d~~~~~~ll~~--g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~T  207 (278)
T 1dcq_A          131 LHSLCEAVKTRDIFGLLQAYAD--GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGST  207 (278)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHT--TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCC
T ss_pred             hhhhhhHhhhcccHHHHHHHHh--hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCC
Confidence            3579999999999999999998  777      444588899999999999   899999999999999 7999999999


Q ss_pred             HHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          164 PLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       164 ~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      |||+|+..|+.+++++|+++|+ ....+..|.||++.|+..|+.+++++|++
T Consensus       208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~  259 (278)
T 1dcq_A          208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQ  259 (278)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            9999999999999999999999 77788889999999999999999999986

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.84  E-value=1.3e-20  Score=123.13  Aligned_cols=91  Identities=22%  Similarity=0.267  Sum_probs=82.9

Q ss_pred             hcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHH
Q 037194           87 AITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLY  166 (215)
Q Consensus        87 ~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~  166 (215)
                      ..+..|.|+||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..|+.+++++|++.|++ ++..|..|.||||
T Consensus        19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~   95 (110)
T 2zgd_A           19 HMGSDLGKKLLEAARAGQDDEVRILMAN--GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFD   95 (110)
T ss_dssp             ---CCHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred             ccCCccchHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcHHH
Confidence            3577899999999999999999999998  899999999999999999999999999999999998 7899999999999


Q ss_pred             HHHHhCCHHHHHHH
Q 037194          167 FAALFGQTDTASFL  180 (215)
Q Consensus       167 ~a~~~g~~~~v~~L  180 (215)
                      +|+..|+.+++++|
T Consensus        96 ~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           96 ISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHTCHHHHHHH
T ss_pred             HHHHcCCHHHHHHh
Confidence            99999999999887

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.84  E-value=1.5e-21  Score=128.64  Aligned_cols=107  Identities=23%  Similarity=0.266  Sum_probs=96.3

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      ...|+|+||+|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +++++.+|..|+||||
T Consensus         6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~--~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~d~~g~tpl~   80 (115)
T 2l6b_A            6 SKDGNTPLHNAAKNGHAEEVKKLLSKG-ADV--NARSKDGNTPLHLAAKNGHAEIVKLLLAK--GADVNARSKDGNTPEH   80 (115)
T ss_dssp             SCSSCCHHHHHHHHTCHHHHHHHTTTT-CCS--SCCCSSSCCTTHHHHTTTCHHHHHHHTTT--TCCTTCCCTTCCCTTH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCC--CCcCCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCcccCCCCCCHHH
Confidence            357889999999999999999999998 443  34688999999999999999999999999  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPL  165 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l  165 (215)
                      +|+..++.+++++|++.|++ ++..+..|.+|-
T Consensus        81 ~A~~~~~~~~~~~Ll~~ga~-~n~~~~~~~~~~  112 (115)
T 2l6b_A           81 LAKKNGHHEIVKLLDAKGAD-VNARSWGSSHHH  112 (115)
T ss_dssp             HHHTTTCHHHHHHHHTTSSS-HHHHSCCCC---
T ss_pred             HHHHCCCHHHHHHHHHcCCC-CCcCCccccccc
Confidence            99999999999999999999 788888888873

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.78  E-value=1.6e-18  Score=113.20  Aligned_cols=91  Identities=27%  Similarity=0.321  Sum_probs=81.7

Q ss_pred             cccCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchh
Q 037194           51 KLCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTA  130 (215)
Q Consensus        51 ~~~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~  130 (215)
                      .....|.++||.|+..|+.++++.|++.+ ...  ...+..|.||||+|+..|+.+++++|++.  +++++.+|..|+||
T Consensus        19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i--~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~tp   93 (110)
T 2zgd_A           19 HMGSDLGKKLLEAARAGQDDEVRILMANG-ADV--AAKDKNGSTPLHLAARNGHLEVVKLLLEA--GADVXAQDKFGKTA   93 (110)
T ss_dssp             ---CCHHHHHHHHHHHTCHHHHHHHHHTT-CCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCH
T ss_pred             ccCCccchHHHHHHHcCCHHHHHHHHHcC-CCC--CccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccccCCCcH
Confidence            34467889999999999999999999988 443  34688999999999999999999999999  99999999999999


Q ss_pred             hHHHHhcCcHHHHHHH
Q 037194          131 FCFAAAVGAVDIANLM  146 (215)
Q Consensus       131 l~~a~~~~~~~~~~~L  146 (215)
                      ||+|+..++.+++++|
T Consensus        94 l~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           94 FDISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHHHTCHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHh
Confidence            9999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	215
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-08
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	6e-07
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	6e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	8e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-05
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-05
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-04
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-04
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	0.001
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-04
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	0.003

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 94  TVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSL 153
           T LHVA+       V+ LL         + +    T    AA  G  ++A  +L+     
Sbjct: 2   TPLHVASFMGHLPIVKNLLQR--GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK- 58

Query: 154 LGIRGSKNMPPLYFAALFGQTDTASFLFHK 183
           +  +   +  PL+ AA  G T+    L   
Sbjct: 59  VNAKAKDDQTPLHCAARIGHTNMVKLLLEN 88

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (110), Expect = 6e-07
 Identities = 26/94 (27%), Positives = 33/94 (35%), Gaps = 3/94 (3%)

Query: 87  AITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLM 146
           A T    T LHVA+       V+ LL      +   + + G +    AA  G  DI  L+
Sbjct: 292 ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA--KTKLGYSPLHQAAQQGHTDIVTLL 349

Query: 147 LKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFL 180
           LK   S      S    PL  A   G       L
Sbjct: 350 LKNGAS-PNEVSSDGTTPLAIAKRLGYISVTDVL 382

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (92), Expect = 1e-04
 Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 5/105 (4%)

Query: 60  LYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED 119
           L+ A+  G +  ++ L ++        +  +  +T LH+A  A  T   + LL       
Sbjct: 4   LHVASFMGHLPIVKNLLQRGAS--PNVSNVKV-ETPLHMAARAGHTEVAKYLLQN--KAK 58

Query: 120 LMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPP 164
           +  + ++  T    AA +G  ++  L+L+ N +      + + P 
Sbjct: 59  VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPL 103

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 3e-06
 Identities = 11/62 (17%), Positives = 20/62 (32%)

Query: 119 DLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTAS 178
           D+ ++ E G T    A     + +   +L++    +    S     L  A        A 
Sbjct: 211 DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 270

Query: 179 FL 180
            L
Sbjct: 271 LL 272

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 2e-05
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 87  AITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLM 146
              E  +T L +A   K    VQ+LL   +  ++   D +G TA   A  +    IA L+
Sbjct: 214 VRGERGKTPLILAVEKKHLGLVQRLLE-QEHIEINDTDSDGKTALLLAVELKLKKIAELL 272

Query: 147 LKK 149
            K+
Sbjct: 273 CKR 275

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.5 bits (101), Expect = 6e-06
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 86  AAITEGHQTVLHVATGAKQTSFVQQLLT-FMDPEDLMLQDENGNTAFCFAAAVGAVDIAN 144
            + T   ++  +   G ++ S ++ L   ++    L  QD NG+T    AA +G + I +
Sbjct: 217 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVD 276

Query: 145 LMLKKNPSLLGIRGSKNMPPLYFAA 169
            +L        I     + P+ F A
Sbjct: 277 ALLDYGAD-PFIANKSGLRPVDFGA 300

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (100), Expect = 8e-06
 Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 124 DENGNTAFCFAAAVGAVDIANLMLKK--NPSLLGIRGSKNMPPLYFAALFGQ 173
            E+G+TA   A         + +L        L ++       L+ AA+ G+
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE 57

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (97), Expect = 2e-05
 Identities = 24/97 (24%), Positives = 34/97 (35%), Gaps = 2/97 (2%)

Query: 88  ITEGHQTVLHVATGAKQTSFVQQLLTFM-DPEDLMLQDENGNTAFCFAAAVGAVDIANLM 146
           +TE   T LH+A   +   F+  LL F    E L LQ++ G TA   AA +G       +
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64

Query: 147 LKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHK 183
                 +L      +      A        A  L   
Sbjct: 65  YAAGAGVLVAERGGHTALHL-ACRVRAHTCACVLLQP 100

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.4 bits (98), Expect = 1e-05
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 93  QTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPS 152
           +T LH A        V+ L       +   QDE+G T    AA  G +++   ++++  S
Sbjct: 188 RTALHYAAQVSNMPIVKYL-VGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS 246

Query: 153 LLGIRGSKNMPPLYFAALFGQTDTASFL 180
            +    + +      A      +     
Sbjct: 247 -VEAVDATDHTARQLAQANNHHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 38.6 bits (88), Expect = 3e-04
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 89  TEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLK 148
            E  +T + +A    +   V  L+       +   D   +TA   A A    +I ++  +
Sbjct: 218 DEDGKTPIMLAAQEGRIEVVMYLIQQG--ASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 2/126 (1%)

Query: 57  RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMD 116
            ++ + AA+ G    ++ L        I   I   +     +A        + +L     
Sbjct: 91  EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP 150

Query: 117 PEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLG--IRGSKNMPPLYFAALFGQT 174
            E + +       AF  AA  G + + N + +  P+     I+        + A   G  
Sbjct: 151 TEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH 210

Query: 175 DTASFL 180
           +  +FL
Sbjct: 211 NVINFL 216

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 36.8 bits (84), Expect = 0.001
 Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 119 DLMLQDENGNTAFCFAAAVGAVDIANLM--LKKNPSLLGIRGSKNMPPLYFAALFGQTDT 176
           D   +          AA  G     + +  L  +  ++ +  ++N      AA  G    
Sbjct: 82  DAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHV 141

Query: 177 ASFLFHK 183
            + L   
Sbjct: 142 LNRLCEL 148

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.6 bits (88), Expect = 2e-04
 Identities = 14/56 (25%), Positives = 20/56 (35%)

Query: 128 NTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHK 183
           N     A           +L   PSLL  +      PL+++  F   +  SFL  K
Sbjct: 1   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSK 56

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (79), Expect = 0.003
 Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 2/58 (3%)

Query: 92  HQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKK 149
            +T LH+A   +    V  LL      D+      G + +       +  I   + + 
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCG--ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQL 200

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	215
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.97
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.96
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.95
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.95
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.95
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.94
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.94
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.94
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.94
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.93
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.93
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.93
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.93
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.92
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.92
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.92
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.92
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.91
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.91
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.9
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.9
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.89
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.88
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.88
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.88
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.87
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.87
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.87
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.86
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.85
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.84
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.76

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.9e-29  Score=187.00  Aligned_cols=159  Identities=15%  Similarity=0.107  Sum_probs=128.8

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccC-----------------
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMD-----------------  116 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~-----------------  116 (215)
                      ..|.||||+|+..|+.++++.|++.| ..+  ...+..|.||||+|+..++.+++++|++...                 
T Consensus        43 ~~g~TpL~~A~~~g~~~iv~~Ll~~g-a~i--~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~  119 (255)
T d1oy3d_          43 DLGQTALHLAAILGEASTVEKLYAAG-AGV--LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDC  119 (255)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTT-CCS--SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------
T ss_pred             CCCCCccchHHhhccccccccccccc-ccc--cccccccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhh
Confidence            46778888888888888888888877 333  2467778888888888888888888765411                 


Q ss_pred             ----------------------------CCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 037194          117 ----------------------------PEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFA  168 (215)
Q Consensus       117 ----------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a  168 (215)
                                                  +.+++.+|..|.||||+|+..++.+++++|++.++......+..|.||||+|
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A  199 (255)
T d1oy3d_         120 TPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLA  199 (255)
T ss_dssp             ------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHH
T ss_pred             cccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhccccccccccccccccccccc
Confidence                                        2233556788999999999999999999999999885555677899999999


Q ss_pred             HHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          169 ALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       169 ~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      +..|+.+++++|+++|+ ....+..|.||++.|+..++.+++++||++
T Consensus       200 ~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~  247 (255)
T d1oy3d_         200 VEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH  247 (255)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT
T ss_pred             ccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence            99999999999999998 666777888899999999999999999864

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-27  Score=164.89  Aligned_cols=151  Identities=19%  Similarity=0.196  Sum_probs=136.6

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      ..|+.|+..|+.+.|+.|++++ ...+. ..+..|+||||+|+ +|+.+++++|+..  +.+++..+..|.+|+++++..
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~-~~~~n-~~d~~g~t~L~~A~-~~~~~~v~~Ll~~--~~~~~~~~~~~~~~l~~~~~~   78 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRE-LVHPD-ALNRFGKTALQVMM-FGSTAIALELLKQ--GASPNVQDTSGTSPVHDAART   78 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTT-CCCTT-CCCTTSCCHHHHSC-TTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHT
T ss_pred             HHHHHHHHcCCHHHHHHHHHhC-CCCCC-ccCCCCCccccccc-ccccccccccccc--ccccccccccccccccccccc
Confidence            4599999999999999999986 33333 57899999999987 5889999999998  899999999999999999999


Q ss_pred             CcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          138 GAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       138 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      ++.++++++++.+++ ++..|..|.||||+|+..|+.+++++|+ .++ ....+..|.||++.|+..|+.+++++|++|
T Consensus        79 ~~~~~~~~~l~~~~~-~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          79 GFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             TCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccccc-cccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            999999999999998 7999999999999999999999999888 455 666788889999999999999999999976

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-27  Score=163.62  Aligned_cols=151  Identities=19%  Similarity=0.184  Sum_probs=139.8

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      ++||+|+..|+.++|+.|+++| ..+  ..++..|.||||+|+ .|+.+++++|++.  +++++.++..|.++++.++..
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g-~d~--n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~--~a~~~~~~~~~~~~l~~~~~~   76 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNN-VNV--NAQNGFGRTALQVMK-LGNPEIARRLLLR--GANPDLKDRTGFAVIHDAARA   76 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSC-CCT--TCCCTTSCCHHHHCC-SSCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCC-CCc--CccCCcccccccccc-ccccccccccccc--ccccccccccCcccccccccc
Confidence            8899999999999999999998 554  357899999999886 7899999999999  999999999999999999999


Q ss_pred             CcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC--CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          138 GAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE--KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       138 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      ++...+++|+..+.. .+..+..|.+|+++|+..++.+++++|+++++  ....+..|.||+|.|+..++.+++++|+++
T Consensus        77 ~~~~~~~~l~~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~  155 (156)
T d1ihba_          77 GFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN  155 (156)
T ss_dssp             TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             ccccccccccccccc-ccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            999999999999998 78899999999999999999999999999997  556777888999999999999999999875

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.7e-27  Score=171.63  Aligned_cols=157  Identities=20%  Similarity=0.191  Sum_probs=132.5

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhh-------------------------------hhhhcCCCCccHHHHHHh
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSI-------------------------------ICAAITEGHQTVLHVATG  101 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~-------------------------------~~~~~~~~g~~~L~~a~~  101 (215)
                      ...|+||||+|+..|+.++++.++..+. ..                               .....+..|.||||+|+.
T Consensus        34 D~~G~TpLh~Aa~~g~~e~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~  112 (223)
T d1uoha_          34 DQDSRTALHWACSAGHTEIVEFLLQLGV-PVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAAS  112 (223)
T ss_dssp             CTTSCCHHHHHHHHTCHHHHHHHHHHTC-CSCCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHhhhhccccccccccc-ccccccccccccccccccccccchhHHHhccCceeEeeCCCCCchhhHHHH
Confidence            3578888888888888888887776631 00                               011356778999999999


Q ss_pred             cCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHh
Q 037194          102 AKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLF  181 (215)
Q Consensus       102 ~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll  181 (215)
                      +|+.+++++|++.  |.+++.++..|.||||+|+..++.+++++|...+.+ ++..|..|+||||+|+..|+.+++++|+
T Consensus       113 ~~~~e~~~~Ll~~--g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~-i~~~d~~g~TpL~~Aa~~g~~~~v~~LL  189 (223)
T d1uoha_         113 KNRHEIAVMLLEG--GANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAS-TNIQDTEGNTPLHLACDEERVEEAKLLV  189 (223)
T ss_dssp             HTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred             cCCHHHHHHHHHC--CCCCCCcCCCCCccchhhhhcCCcchhhhhccccce-eeeccCCCCceeccccccCcHHHHHHHH
Confidence            9999999999998  889999999999999999999999999999999988 7899999999999999999999999999


Q ss_pred             hcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          182 HKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       182 ~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      ++|+ ....+..|.+|+++| ..|+.++++.||+
T Consensus       190 ~~Gad~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         190 SQGASIYIENKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             HTTCCSCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             HCCCCCCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence            9998 667777788888887 5688899998886

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.1e-27  Score=172.94  Aligned_cols=123  Identities=22%  Similarity=0.187  Sum_probs=113.6

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      ...|+||||+|+..|+.++++.|++.| ..+  ...+..|.||||+|+..++.+++++|+..  +.+++.+|..|+||||
T Consensus       100 d~~g~tpL~~A~~~~~~e~~~~Ll~~g-~d~--~~~~~~~~t~L~~a~~~~~~~~~~~L~~~--~~~i~~~d~~g~TpL~  174 (223)
T d1uoha_         100 NQNGCTPLHYAASKNRHEIAVMLLEGG-ANP--DAKDHYEATAMHRAAAKGNLKMIHILLYY--KASTNIQDTEGNTPLH  174 (223)
T ss_dssp             CTTCCCHHHHHHHHTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTCCCHHH
T ss_pred             CCCCCchhhHHHHcCCHHHHHHHHHCC-CCC--CCcCCCCCccchhhhhcCCcchhhhhccc--cceeeeccCCCCceec
Confidence            357889999999999999999999998 443  35788999999999999999999999998  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhh
Q 037194          133 FAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFH  182 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~  182 (215)
                      +|+..|+.+++++|++.|++ ++..|..|+||||+|. .|+.+++++|++
T Consensus       175 ~Aa~~g~~~~v~~LL~~Gad-~~~~d~~g~tpl~~A~-~~~~~i~~~Ll~  222 (223)
T d1uoha_         175 LACDEERVEEAKLLVSQGAS-IYIENKEEKTPLQVAK-GGLGLILKRMVE  222 (223)
T ss_dssp             HHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHCC-TTHHHHHHHHHC
T ss_pred             cccccCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHH-CCCHHHHhcccC
Confidence            99999999999999999999 7999999999999984 688999999985

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=3.5e-26  Score=156.76  Aligned_cols=149  Identities=19%  Similarity=0.177  Sum_probs=135.7

Q ss_pred             cHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHh
Q 037194           57 RLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAA  136 (215)
Q Consensus        57 ~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~  136 (215)
                      .|||+.|++.|+.++++.||+.+ +..   ..+..|+||||+|+..++.++++.++..  .......+..+.+++++++.
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~g-a~~---~~~~~g~t~L~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   76 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANG-APF---TTDWLGTSPLHLAAQYGHFSTTEVLLRA--GVSRDARTKVDRTPLHMAAS   76 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHT-CCC---CCCTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcC-CCc---ccccCCCccccccccccccccccccccc--cccccccccccccccccccc
Confidence            38999999999999999999998 432   2588999999999999999999999987  66667778888999999999


Q ss_pred             cCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          137 VGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       137 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      ..+.+++++++..+++ .+..+..|+||||+|+..|+.+++++|++.|+ ....+..|.||++.|+..|+.+++++|
T Consensus        77 ~~~~~~~~~l~~~~~~-~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          77 EGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             cccceeeecccccCCc-cccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            9999999999999998 78999999999999999999999999999999 667788899999999999999998754

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.5e-27  Score=157.27  Aligned_cols=121  Identities=20%  Similarity=0.204  Sum_probs=101.9

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCc-hhhHH
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGN-TAFCF  133 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~-t~l~~  133 (215)
                      ++.++||+|+..|+++++++|++.| ..+  ...+..|.||+|+|+ .|+.+++++|++.  |++++.++..+. ||||+
T Consensus         2 p~~~~L~~Aa~~G~~~~v~~Ll~~g-ad~--n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~--ga~~~~~~~~~~~~~L~~   75 (125)
T d1bi7b_           2 PSADWLATAAARGRVEEVRALLEAG-ANP--NAPNSYGRRPIQVMM-MGSARVAELLLLH--GAEPNCADPATLTRPVHD   75 (125)
T ss_dssp             CSTTHHHHHHHHTCHHHHHHHHTTT-CCT--TCCCSSSCCTTTSSC-TTCHHHHHHHHTT--TCCCCCCCTTTCCCHHHH
T ss_pred             CChhHHHHHHHCCCHHHHHHHHHcC-Ccc--ccccccccccccccc-ccccccccccccc--cccccccccccccccccc
Confidence            4457899999999999999999887 443  246788899988664 6889999999988  888888888776 58999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFH  182 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~  182 (215)
                      |+..|+.+++++|++.|++ ++..|..|+||||+|+..|+.+++++|+.
T Consensus        76 A~~~g~~~~v~~Ll~~ga~-~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          76 AAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccc-cccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            9999999999999999888 78888899999999999999999998874

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.94  E-value=3.3e-26  Score=171.10  Aligned_cols=158  Identities=17%  Similarity=0.160  Sum_probs=112.5

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhh------hhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCccccc---
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSI------ICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQD---  124 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~------~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~---  124 (215)
                      +.|+||||+|+..|+.++++.|+... ...      ....++..|+||||+|+..|+.+++++|++.  |++++.+|   
T Consensus        31 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~-~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~--Gad~n~~~~~g  107 (277)
T d2fo1e1          31 RHNRTVLHWIASNSSAEKSEDLIVHE-AKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKA--GADPTIYNKSE  107 (277)
T ss_dssp             SSCCCHHHHHHCTTCCSCCTTHHHHH-HHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTC
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHhcc-hhHHHHcCCCccccCCCCCeeecccccccccccccccccc--ccccccccccc
Confidence            34667777777777766666665443 111      0113566677777777777777777777766  44444333   


Q ss_pred             -----------------------------------------------------------------------------CCC
Q 037194          125 -----------------------------------------------------------------------------ENG  127 (215)
Q Consensus       125 -----------------------------------------------------------------------------~~g  127 (215)
                                                                                                   ..|
T Consensus       108 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  187 (277)
T d2fo1e1         108 RSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKG  187 (277)
T ss_dssp             CCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCC
T ss_pred             cccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCC
Confidence                                                                                         345


Q ss_pred             chhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCch
Q 037194          128 NTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLY  206 (215)
Q Consensus       128 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~  206 (215)
                      +||||+++..++.+++++++.......+..|..|+||||+|+..|+.+++++|+++|+ ....+..|.|+++.|+..|+.
T Consensus       188 ~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~  267 (277)
T d2fo1e1         188 RTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHH  267 (277)
T ss_dssp             CCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCH
T ss_pred             CCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCH
Confidence            6666666666666666655544333257789999999999999999999999999998 667778889999999999999


Q ss_pred             hHHHHhhc
Q 037194          207 GKYQDIFK  214 (215)
Q Consensus       207 ~~~~~ll~  214 (215)
                      +++++|++
T Consensus       268 ~iv~lL~~  275 (277)
T d2fo1e1         268 NIVDIFDR  275 (277)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
Confidence            99998875

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.5e-25  Score=163.22  Aligned_cols=157  Identities=16%  Similarity=0.125  Sum_probs=91.5

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhh-hhhcCCCCccHHHHHHhcCCHHHHHHHHHccC----------------
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSII-CAAITEGHQTVLHVATGAKQTSFVQQLLTFMD----------------  116 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~-~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~----------------  116 (215)
                      ..|+||||+|+..|+.++++.|++.+ .... ....+..|.+++|+++..+..++++.++....                
T Consensus        32 ~~G~TpL~~A~~~g~~~iv~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  110 (229)
T d1ixva_          32 QDGRIPLHWSVSFQAHEITSFLLSKM-ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLH  110 (229)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHTTC-TTCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHH
T ss_pred             CCCCCHHHHHHHcCCccccchhhhhh-ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            46677777777777777777777765 3321 11234455555555555555444444433311                


Q ss_pred             -----------------CCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHH
Q 037194          117 -----------------PEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASF  179 (215)
Q Consensus       117 -----------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~  179 (215)
                                       +...+.++..|+||||+|+..|+.+++++|++.+...++..|..|+||||+|+..|+.+++++
T Consensus       111 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~  190 (229)
T d1ixva_         111 LAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVL  190 (229)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             cccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhcccccHHHHHH
Confidence                             333344556666777777777777777777666644356666667777777777777777777


Q ss_pred             Hhhc-CC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          180 LFHK-SE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       180 Ll~~-~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      |+++ |+ ....+..|.++++.|+.   .++.++||+
T Consensus       191 Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~  224 (229)
T d1ixva_         191 LVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLN  224 (229)
T ss_dssp             HHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHH
T ss_pred             HHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHH
Confidence            6653 55 44455555566665542   356666654

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.6e-26  Score=149.73  Aligned_cols=120  Identities=15%  Similarity=0.104  Sum_probs=110.2

Q ss_pred             CCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCC-CHHHHHH
Q 037194           91 GHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNM-PPLYFAA  169 (215)
Q Consensus        91 ~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~-t~l~~a~  169 (215)
                      .+.++||+|+.+|+.++|++|++.  |++++.++..|.||+|+|+ .|+.+++++|++.|++ ++..+..+. ||||+|+
T Consensus         2 p~~~~L~~Aa~~G~~~~v~~Ll~~--gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~L~~A~   77 (125)
T d1bi7b_           2 PSADWLATAAARGRVEEVRALLEA--GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPVHDAA   77 (125)
T ss_dssp             CSTTHHHHHHHHTCHHHHHHHHTT--TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHHHHHH
T ss_pred             CChhHHHHHHHCCCHHHHHHHHHc--CCccccccccccccccccc-cccccccccccccccc-ccccccccccccccccc
Confidence            356899999999999999999998  9999999999999999775 6899999999999999 788888776 6999999


Q ss_pred             HhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          170 LFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       170 ~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      ..|+.+++++|+++|+ ....+..|.||++.|+..|+.+++++|+.
T Consensus        78 ~~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          78 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            9999999999999998 67778888999999999999999999985

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.93  E-value=3.7e-25  Score=158.99  Aligned_cols=153  Identities=20%  Similarity=0.240  Sum_probs=130.6

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCH----------------------------
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQT----------------------------  105 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~----------------------------  105 (215)
                      .+|.||||+|+..|+.++++.|+..+ ...  ...+..+.++++.++..++.                            
T Consensus        21 ~~G~t~L~~A~~~g~~e~v~~Ll~~g-~~~--n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (209)
T d1ot8a_          21 KTGETSLHLAARFARADAAKRLLDAG-ADA--NSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILA   97 (209)
T ss_dssp             HHCCCHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHHHH
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhhc-ccc--cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            57889999999999999999999987 333  23556666666666666554                            


Q ss_pred             ------HHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHH
Q 037194          106 ------SFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASF  179 (215)
Q Consensus       106 ------~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~  179 (215)
                            ...+.|...  +.+++.++..|.|||++++..+...+++.++..+.+ ++..|..|.||||+|+..|+.+++++
T Consensus        98 ~~~~~~~~~~~L~~~--~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~-~~~~d~~g~TpL~~A~~~g~~~~v~~  174 (209)
T d1ot8a_          98 ARLAIEGMVEDLITA--DADINAADNSGKTALHWAAAVNNTEAVNILLMHHAN-RDAQDDKDETPLFLAAREGSYEASKA  174 (209)
T ss_dssp             HHTTCTTHHHHHHHT--TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             ccccchhhhhhhhhh--cccccccCCCCCCcchhhcccCcceeeeeecccccc-ccccccccccccchhccccHHHHHHH
Confidence                  444445554  777888999999999999999999999999999999 79999999999999999999999999


Q ss_pred             HhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          180 LFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       180 Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      |+++|+ ....+..|.||++.|+..|+.+++++|
T Consensus       175 Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         175 LLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            999999 667788899999999999999999865

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=3.7e-27  Score=154.79  Aligned_cols=105  Identities=22%  Similarity=0.280  Sum_probs=55.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      |||.+|+..|+.++++.|++.| ...  ..++..|+||||+|+..|+.+++++|++.  |++++.+|..|+||||+|+..
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g-~d~--n~~~~~g~t~lh~A~~~~~~~~~~~ll~~--g~din~~d~~g~tpLh~A~~~   78 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKG-EDV--NRTLEGGRKPLHYAADCGQLEILEFLLLK--GADINAPDKHHITPLLSAVYE   78 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTT-CCC--CCCSSSSCCTTHHHHHHSTTTHHHHHHHS--SCTTTCCSSSCSCHHHHHHTT
T ss_pred             hHHHHHHHCCCHHHHHHHHHhh-hcc--ccccccccccccccccccccccccccccc--cceeeecccccccchhhhhhc
Confidence            4555555555555555555554 222  12444555555555555555555555555  555555555555555555555


Q ss_pred             CcHHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 037194          138 GAVDIANLMLKKNPSLLGIRGSKNMPPLYFA  168 (215)
Q Consensus       138 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a  168 (215)
                      |+.+++++|++.|++ ++..|..|.||||+|
T Consensus        79 ~~~~~v~~Ll~~Gad-~~~~d~~G~t~l~~a  108 (118)
T d1myoa_          79 GHVSCVKLLLSKGAD-KTVKGPDGLTALEAT  108 (118)
T ss_dssp             TCCHHHHHHHTTCCC-SSSSSSSTCCCCCTC
T ss_pred             Cchhhhhhhhccccc-ceeeCCCCCCHHHHH
Confidence            555555555555555 455555555555554

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=2.3e-26  Score=150.99  Aligned_cols=115  Identities=17%  Similarity=0.240  Sum_probs=104.8

Q ss_pred             ccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhC
Q 037194           93 QTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFG  172 (215)
Q Consensus        93 ~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g  172 (215)
                      .|||++|+..|+.++|++|++.  |++++.++..|+||||+|+..++.+++++|++.|++ ++..|..|+||||+|+..|
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~--g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~d-in~~d~~g~tpLh~A~~~~   79 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAK--GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVYEG   79 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTT--TCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCT-TTCCSSSCSCHHHHHHTTT
T ss_pred             ChHHHHHHHCCCHHHHHHHHHh--hhccccccccccccccccccccccccccccccccce-eeecccccccchhhhhhcC
Confidence            4799999999999999999999  999999999999999999999999999999999999 7999999999999999999


Q ss_pred             CHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          173 QTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       173 ~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      +.+++++|+++|+ ....+..|.++++.|    ..+.++.||+
T Consensus        80 ~~~~v~~Ll~~Gad~~~~d~~G~t~l~~a----~~~~i~~LL~  118 (118)
T d1myoa_          80 HVSCVKLLLSKGADKTVKGPDGLTALEAT----DNQAIKALLQ  118 (118)
T ss_dssp             CCHHHHHHHTTCCCSSSSSSSTCCCCCTC----SSTTTGGGGC
T ss_pred             chhhhhhhhcccccceeeCCCCCCHHHHH----hHHHHHHhcC
Confidence            9999999999998 667778888888877    2355666664

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.2e-25  Score=148.69  Aligned_cols=120  Identities=20%  Similarity=0.236  Sum_probs=80.6

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      +.|+.|+..|+.++++.|+++| ..+  ..++..|+||||+|+..|+.+++++|++.  +.+++.+|..|+||||+|+..
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g-~d~--n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~--g~~~~~~d~~g~tpLh~A~~~   77 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEV-DDP--SLPNDEGITALHNAVCAGHTEIVKFLVQF--GVNVNAADSDGWTPLHCAASC   77 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTT-SSC--CCCCTTSCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHT
T ss_pred             HHHHHHHHcCCHHHHHHHHHcC-CCc--ccccccccccccccccccccccccccccc--ccccccccccCcccccccchh
Confidence            5667777777777777777766 332  24566677777777777777777777776  677777777777777777777


Q ss_pred             CcHHHHHHHHHhCCCCCCCCCC-CCCCHHHHH--HHhCCHHHHHHHhhc
Q 037194          138 GAVDIANLMLKKNPSLLGIRGS-KNMPPLYFA--ALFGQTDTASFLFHK  183 (215)
Q Consensus       138 ~~~~~~~~Ll~~~~~~~~~~~~-~g~t~l~~a--~~~g~~~~v~~Ll~~  183 (215)
                      |+.+++++|++.|++ ++..+. .+.||++++  ...|+.+++++|+..
T Consensus        78 g~~~~v~~Ll~~ga~-v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          78 NNVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             TCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            777777777777776 454443 466665554  455667777777654

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.5e-25  Score=160.46  Aligned_cols=153  Identities=14%  Similarity=0.120  Sum_probs=126.0

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcc--hhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCc-----------
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDY--RSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDL-----------  120 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~--~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~-----------  120 (215)
                      ++|.||||.|+..|+.++++.|++...  ...+ ..++..|+||||+|+..|+.+++++|++.  +++.           
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~i-n~~d~~g~TpL~~A~~~~~~~iv~~Ll~~--ga~~~~~~~~~~~~~   77 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTA--GASPMALDRHGQTAA   77 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CccCCCCCccceehhcccccccccccccc--ccccccccccccccc
Confidence            479999999999999999999987430  1112 25678899999999999999999999987  3222           


Q ss_pred             ------------------------------------------------------------ccccCCCchhhHHHHhcCcH
Q 037194          121 ------------------------------------------------------------MLQDENGNTAFCFAAAVGAV  140 (215)
Q Consensus       121 ------------------------------------------------------------~~~~~~g~t~l~~a~~~~~~  140 (215)
                                                                                  ...+..+.++++.|+..+..
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~  157 (228)
T d1k1aa_          78 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL  157 (228)
T ss_dssp             HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred             ccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhh
Confidence                                                                        11234678899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHH
Q 037194          141 DIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQ  210 (215)
Q Consensus       141 ~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~  210 (215)
                      .+++.+++.+.. .+..+..|.||||+|+..|+.+++++|+++|+ ....+..|.||++.|+..|+.++++
T Consensus       158 ~~~~~~~~~~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         158 SMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             HHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             hhhhhhhhhccc-cccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCccccC
Confidence            999999999888 68889999999999999999999999999998 6677788888899888888777653

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.7e-25  Score=149.23  Aligned_cols=118  Identities=18%  Similarity=0.224  Sum_probs=105.6

Q ss_pred             cHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCC
Q 037194           94 TVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQ  173 (215)
Q Consensus        94 ~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~  173 (215)
                      +.|+.|+..|+.++|++|++.  |++++.+|..|+||||+|+..++.+++++|++.|++ ++..|.+|+||||+|+..|+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~--g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~-~~~~d~~g~tpLh~A~~~g~   79 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYE--VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNN   79 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTST--TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTC
T ss_pred             HHHHHHHHcCCHHHHHHHHHc--CCCccccccccccccccccccccccccccccccccc-cccccccCcccccccchhhH
Confidence            579999999999999999999  999999999999999999999999999999999999 79999999999999999999


Q ss_pred             HHHHHHHhhcCC--CCCCCCCCchHHHHH--HhcCchhHHHHhhc
Q 037194          174 TDTASFLFHKSE--KELPTEDRKVIFITS--VDTGLYGKYQDIFK  214 (215)
Q Consensus       174 ~~~v~~Ll~~~~--~~~~~~~~~~~~~~a--~~~~~~~~~~~ll~  214 (215)
                      .+++++|+++|+  ...+..++.+++..+  ...|+.+++++|+.
T Consensus        80 ~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~  124 (130)
T d1ycsb1          80 VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG  124 (130)
T ss_dssp             HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHh
Confidence            999999999998  334445566665544  56788999999874

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.92  E-value=3.5e-24  Score=161.26  Aligned_cols=90  Identities=22%  Similarity=0.303  Sum_probs=65.1

Q ss_pred             ccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHH
Q 037194           56 ERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAA  135 (215)
Q Consensus        56 g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~  135 (215)
                      +.|+|+.|+..|+.+.|+.|+++| ..+  ...+..|.||||+|+..|+.+++++|++.  +.+....+..+.+||++++
T Consensus        40 ~~t~l~~A~~~G~~~~v~~Ll~~G-adv--n~~d~~G~T~L~~A~~~g~~eiv~~Ll~~--~~~~~~~~~~~~~~L~~a~  114 (291)
T d1s70b_          40 DGAVFLAACSSGDTEEVLRLLERG-ADI--NYANVDGLTALHQACIDDNVDMVKFLVEN--GANINQPDNEGWIPLHAAA  114 (291)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHC-CCT--TCBCTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH
T ss_pred             CchHHHHHHHcCCHHHHHHHHHCC-CCC--CccCCCCCcHHHHHHhcCCceeeeeeccc--ccccccccccccccccccc
Confidence            448888888888888888888888 443  24688888899999888888888888887  5555555555555555555


Q ss_pred             hcCcHHHHHHHHHhC
Q 037194          136 AVGAVDIANLMLKKN  150 (215)
Q Consensus       136 ~~~~~~~~~~Ll~~~  150 (215)
                      ..++.++++.|++.+
T Consensus       115 ~~~~~~~~~~l~~~~  129 (291)
T d1s70b_         115 SCGYLDIAEYLISQG  129 (291)
T ss_dssp             HHTCHHHHHHHHHTT
T ss_pred             cccccchhhcccccC
Confidence            555555555555544

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.4e-25  Score=160.19  Aligned_cols=157  Identities=16%  Similarity=0.063  Sum_probs=137.0

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCC------cccccCC
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPED------LMLQDEN  126 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~------~~~~~~~  126 (215)
                      ...|+||||+|+..|+.+++++|++.+ ...  ...+..|.+|||+++..++.++++.|+..  +..      .......
T Consensus        36 d~~g~TpLh~A~~~~~~~iv~~L~~~g-~d~--~~~d~~g~t~l~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~  110 (221)
T d1iknd_          36 NNLQQTPLHLAVITNQPEIAEALLGAG-CDP--ELRDFRGNTPLHLACEQGCLASVGVLTQS--CTTPHLHSILKATNYN  110 (221)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHCCCSCC-CCS--CCCCTTCCCHHHHHHHHTCHHHHHHHHHS--TTTTSSSCGGGCCCTT
T ss_pred             CCCCCcccccccccccccccccccccc-ccc--cccccccccccccccccccccccchhhhh--cccccccccccccccc
Confidence            358999999999999999999999998 443  35788999999999999999999999987  332      2334566


Q ss_pred             CchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCc
Q 037194          127 GNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGL  205 (215)
Q Consensus       127 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~  205 (215)
                      |.||||.|+..++.+++++|+..++......+..|.||||+|+..|+.+++++|+++|+ ....+..|.||++.|+..+.
T Consensus       111 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~  190 (221)
T d1iknd_         111 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS  190 (221)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC
T ss_pred             cchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCHHHHHHHCCC
Confidence            89999999999999999999999998434445679999999999999999999999999 77788889999999999999


Q ss_pred             hhHHHHhhc
Q 037194          206 YGKYQDIFK  214 (215)
Q Consensus       206 ~~~~~~ll~  214 (215)
                      .+++++|++
T Consensus       191 ~~~~~~l~~  199 (221)
T d1iknd_         191 TRIQQQLGQ  199 (221)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
Confidence            999999876

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=2.2e-24  Score=147.53  Aligned_cols=124  Identities=19%  Similarity=0.223  Sum_probs=110.1

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhh----hhcCCCCccHHHHHHhc---CCHHHHHHHHHccCCCCcccccCCCchh
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIIC----AAITEGHQTVLHVATGA---KQTSFVQQLLTFMDPEDLMLQDENGNTA  130 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~----~~~~~~g~~~L~~a~~~---g~~~~v~~Ll~~~~~~~~~~~~~~g~t~  130 (215)
                      ..|..|++.+++..+..++..+ .....    ...+..|+||||+|+..   ++.+++++|++.  |++++.+|..|+||
T Consensus         8 ~~L~~Av~~~dl~~l~~~~~~g-~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~--gadin~~d~~g~Tp   84 (154)
T d1dcqa1           8 HSLCEAVKTRDIFGLLQAYADG-VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN--SGNLDKQTGKGSTA   84 (154)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTT-CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH--CSCTTCCCTTCCCH
T ss_pred             HHHHHHHHhCCHHHHHHHHHcC-CCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHc--CCChhhhhhhhccc
Confidence            4577899999999999999887 32211    12356799999999975   678999999999  99999999999999


Q ss_pred             hHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          131 FCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       131 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      ||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|++.++
T Consensus        85 Lh~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1          85 LHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             cccccccccccccccccccCcc-ccccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            9999999999999999999999 79999999999999999999999999999876

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.2e-25  Score=160.92  Aligned_cols=156  Identities=17%  Similarity=0.123  Sum_probs=132.3

Q ss_pred             cccHHHHHHHHcCCHHHHHHHH----hhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchh
Q 037194           55 SERLLLYKAALKGEMKEIEGLF----EKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTA  130 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll----~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~  130 (215)
                      +|.||||+|+..|+.+.++.++    ..+ .. + ..++..|+||||+|+..|+.+++++|++.  |++++.+|..|.||
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~-~~-i-n~~d~~g~TpLh~A~~~~~~~iv~~L~~~--g~d~~~~d~~g~t~   75 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDL-AF-L-NFQNNLQQTPLHLAVITNQPEIAEALLGA--GCDPELRDFRGNTP   75 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----C-CC-C-CCCCTTCCCHHHHHHHTTCHHHHHCCCSC--CCCSCCCCTTCCCH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCC-CC-c-ccCCCCCCccccccccccccccccccccc--cccccccccccccc
Confidence            5889999999999976655444    444 22 2 25788999999999999999999999999  99999999999999


Q ss_pred             hHHHHhcCcHHHHHHHHHhCCCC-----CCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC--CCCCCCCCchHHHHHHhc
Q 037194          131 FCFAAAVGAVDIANLMLKKNPSL-----LGIRGSKNMPPLYFAALFGQTDTASFLFHKSE--KELPTEDRKVIFITSVDT  203 (215)
Q Consensus       131 l~~a~~~~~~~~~~~Ll~~~~~~-----~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~--~~~~~~~~~~~~~~a~~~  203 (215)
                      |++++..++.++++.|+..+...     .......|.||||.|+..++.+++++|+..++  ...++.+|.|++|.|+..
T Consensus        76 l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~  155 (221)
T d1iknd_          76 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL  155 (221)
T ss_dssp             HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred             cccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCcccccccc
Confidence            99999999999999999976441     23345568999999999999999999999998  445667789999999999


Q ss_pred             CchhHHHHhhcC
Q 037194          204 GLYGKYQDIFKR  215 (215)
Q Consensus       204 ~~~~~~~~ll~~  215 (215)
                      |..+++++||++
T Consensus       156 g~~~~v~~Ll~~  167 (221)
T d1iknd_         156 QNPDLVSLLLKC  167 (221)
T ss_dssp             TCHHHHHHHHTT
T ss_pred             ccHHHHHHHHhc
Confidence            999999999864

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.2e-24  Score=166.76  Aligned_cols=152  Identities=19%  Similarity=0.260  Sum_probs=131.0

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhc
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAV  137 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~  137 (215)
                      ||||.|+..|+.++|+.|++.| ..+  ...+..|+||||+|+..|+.+++++|+++  |++++.++..|+||||+|+..
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~g-~~i--n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~--gadi~~~~~~g~t~L~~A~~~   76 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQRG-ASP--NVSNVKVETPLHMAARAGHTEVAKYLLQN--KAKVNAKAKDDQTPLHCAARI   76 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTT-CCS--CCSSSCCCCHHHHHHHHTCHHHHHHHHHH--TCCSSCCCTTSCCHHHHHHHH
T ss_pred             ChHHHHHHCcCHHHHHHHHHCC-CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHC--cCCCCCCCCCCCCHHHHHHHc
Confidence            7999999999999999999998 443  24688899999999999999999999999  899999999999999999999


Q ss_pred             CcHHHHHHHHHhCCCC--------------------------------CCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC
Q 037194          138 GAVDIANLMLKKNPSL--------------------------------LGIRGSKNMPPLYFAALFGQTDTASFLFHKSE  185 (215)
Q Consensus       138 ~~~~~~~~Ll~~~~~~--------------------------------~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~  185 (215)
                      |+.+++++|+....+.                                ....+..+.++++.|+..++.+++++|++++.
T Consensus        77 g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~  156 (408)
T d1n11a_          77 GHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA  156 (408)
T ss_dssp             TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCC
Confidence            9999999988765431                                24456678899999999999999999999988


Q ss_pred             -CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          186 -KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       186 -~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                       ....+.++.++++.|+..+..+++++|++
T Consensus       157 ~~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~  186 (408)
T d1n11a_         157 HPNAAGKNGLTPLHVAVHHNNLDIVKLLLP  186 (408)
T ss_dssp             CTTCCCSSCCCHHHHHHHTTCHHHHHHHGG
T ss_pred             CCCcCCCcCchHHHHHHHcCCHHHHHHHHh
Confidence             66666777888888888899999988875

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=4e-24  Score=155.59  Aligned_cols=152  Identities=16%  Similarity=0.200  Sum_probs=132.0

Q ss_pred             HHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccc--------------
Q 037194           58 LLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQ--------------  123 (215)
Q Consensus        58 ~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~--------------  123 (215)
                      +|||+|+..|+.+.++.|++.. +.... .++.+|+||||+|+..|+.+++++|++.  +++++..              
T Consensus         2 ~pLh~A~~~g~~~~v~~Ll~~~-~~~~~-~~d~~G~TpL~~A~~~g~~~iv~~Ll~~--ga~~~~~~~~~~~~~~~~~~~   77 (229)
T d1ixva_           2 YPLHQACMENEFFKVQELLHSK-PSLLL-QKDQDGRIPLHWSVSFQAHEITSFLLSK--MENVNLDDYPDDSGWTPFHIA   77 (229)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHC-GGGTT-CCCTTSCCHHHHHHHTTCHHHHHHHHTT--CTTCCGGGCCCTTSCCHHHHH
T ss_pred             HhHHHHHHcCCHHHHHHHHHcC-CCccc-ccCCCCCCHHHHHHHcCCccccchhhhh--hcccccccccccccccccccc
Confidence            6999999999999999999987 55554 6789999999999999999999999998  6665322              


Q ss_pred             ------------------------cCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHH
Q 037194          124 ------------------------DENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASF  179 (215)
Q Consensus       124 ------------------------~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~  179 (215)
                                              +..+.|+++.++..++.+++++|+..+.. ....+..|+||||+|+..|+.+++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~  156 (229)
T d1ixva_          78 CSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIEL  156 (229)
T ss_dssp             HHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccc-ccccCCCCCCccchhhhccccccccc
Confidence                                    23456777777777888899999999998 68899999999999999999999999


Q ss_pred             HhhcCC--CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          180 LFHKSE--KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       180 Ll~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      |++.+.  ....+..|.||+|.|+..|+.+++++||+
T Consensus       157 Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~  193 (229)
T d1ixva_         157 LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVE  193 (229)
T ss_dssp             HHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             ccccccccccccccccCCchhhhcccccHHHHHHHHH
Confidence            999986  45577788999999999999999999985

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.8e-24  Score=165.88  Aligned_cols=153  Identities=16%  Similarity=0.179  Sum_probs=140.4

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|.++|+.|+..++.++++.++... ...  ...+..|.+|++.|+..++.+++++|++.  |++++..+..+.||||.
T Consensus       229 ~~~~t~l~~a~~~~~~~~~~~~~~~~-~~~--~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~--g~~~~~~~~~~~t~L~~  303 (408)
T d1n11a_         229 VQGVTPLHLAAQEGHAEMVALLLSKQ-ANG--NLGNKSGLTPLHLVAQEGHVPVADVLIKH--GVMVDATTRMGYTPLHV  303 (408)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHTTT-CCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCSSCCCHHHH
T ss_pred             CCCCCHHHHHHHhCcHhHhhhhhccc-ccc--ccccCCCCChhhhhhhcCcHHHHHHHHHC--CCccccccccccccchh
Confidence            45678999999999999999999887 322  34678899999999999999999999999  99999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHh
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDI  212 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l  212 (215)
                      ++..++.++++++++.|++ ++.+|..|.||||+|++.|+.++|++|+++|+ ....+.+|.||++.|+..|+.+++++|
T Consensus       304 ~~~~~~~~~~~~ll~~g~~-in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L  382 (408)
T d1n11a_         304 ASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL  382 (408)
T ss_dssp             HHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred             hcccCcceeeeeecccccc-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence            9999999999999999999 79999999999999999999999999999999 777888899999999999999999865

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.9e-23  Score=156.57  Aligned_cols=73  Identities=19%  Similarity=0.253  Sum_probs=60.9

Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhc-CC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          141 DIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHK-SE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       141 ~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~-~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      .++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++ |. ....+..|.||+|.|+..|+.+++++||+
T Consensus       200 ~i~~~Li~~ga~-~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~  274 (285)
T d1wdya_         200 AITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK  274 (285)
T ss_dssp             HHHHHHHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHHCCCC-CCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            345555555666 577788999999999999999999999986 54 55677788899999999999999999986

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.1e-23  Score=143.35  Aligned_cols=122  Identities=16%  Similarity=0.176  Sum_probs=111.3

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||.|+ .|+.+++++|++.+ ...  ...+..|.+|++.++..++.++++++++.  +.+++.+|..|+||||+
T Consensus        34 ~~g~t~L~~A~-~~~~~~v~~Ll~~~-~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~l~~--~~~~n~~~~~~~t~L~~  107 (156)
T d1bd8a_          34 RFGKTALQVMM-FGSTAIALELLKQG-ASP--NVQDTSGTSPVHDAARTGFLDTLKVLVEH--GADVNVPDGTGALPIHL  107 (156)
T ss_dssp             TTSCCHHHHSC-TTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTSCCHHHH
T ss_pred             CCCCccccccc-cccccccccccccc-ccc--ccccccccccccccccccccccccccccc--ccccccccCCCCeeecc
Confidence            57889999886 58999999999988 443  34677899999999999999999999999  89999999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhc
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHK  183 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~  183 (215)
                      |+..|+.+++++|+ .+++ ++..|..|+||||+|+..|+.+++++|+++
T Consensus       108 A~~~~~~~i~~~L~-~~~~-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         108 AVQEGHTAVVSFLA-AESD-LHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHTCHHHHHHHH-TTSC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             cccccccccccccc-cccc-ccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            99999999999888 5788 799999999999999999999999999976

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=4.4e-23  Score=152.38  Aligned_cols=159  Identities=18%  Similarity=0.159  Sum_probs=138.5

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhh-hhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSII-CAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFC  132 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~-~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~  132 (215)
                      ++|.||||+|+..|+.+++++|++.+ .... ...++..|.||||+|+..|+.+++++|++.  |++++.+|..|.||||
T Consensus         7 ~~G~t~Lh~A~~~~~~~~v~~Ll~~~-a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~--ga~i~~~d~~g~tpL~   83 (255)
T d1oy3d_           7 EDGDTALHLAVIHQHEPFLDFLLGFS-AGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA--GAGVLVAERGGHTALH   83 (255)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHHH-TTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTSCCHHH
T ss_pred             cCCCCHHHHHHHcCCHHHHHHHHHcC-CCcccccCcCCCCCCccchHHhhcccccccccccc--cccccccccccchhhh
Confidence            57999999999999999999999987 4322 235678899999999999999999999999  9999999999999999


Q ss_pred             HHHhcCcHHHHHHHHHhCCCC----------------------------------------------CCCCCCCCCCHHH
Q 037194          133 FAAAVGAVDIANLMLKKNPSL----------------------------------------------LGIRGSKNMPPLY  166 (215)
Q Consensus       133 ~a~~~~~~~~~~~Ll~~~~~~----------------------------------------------~~~~~~~g~t~l~  166 (215)
                      +|+..++.+++++|++.....                                              .+..+..|.||||
T Consensus        84 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh  163 (255)
T d1oy3d_          84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH  163 (255)
T ss_dssp             HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred             hhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCccccc
Confidence            999999999999987643210                                              1456788999999


Q ss_pred             HHHHhCCHHHHHHHhhcCC--CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          167 FAALFGQTDTASFLFHKSE--KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       167 ~a~~~g~~~~v~~Ll~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      +|+..++.+++++|++.++  ...++..|.||+|.|+..++.+++++||++
T Consensus       164 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~  214 (255)
T d1oy3d_         164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA  214 (255)
T ss_dssp             HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             ccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHC
Confidence            9999999999999999998  444567788899999999999999999864

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.89  E-value=4.3e-23  Score=155.24  Aligned_cols=144  Identities=18%  Similarity=0.229  Sum_probs=121.6

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCc------------
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDL------------  120 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~------------  120 (215)
                      ...|+||||+|+..|+.+++++|++.+ ...  ...+..+.+||+.++..++.++++.|+..  +...            
T Consensus        70 d~~G~T~L~~A~~~g~~eiv~~Ll~~~-~~~--~~~~~~~~~~L~~a~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~  144 (291)
T d1s70b_          70 NVDGLTALHQACIDDNVDMVKFLVENG-ANI--NQPDNEGWIPLHAAASCGYLDIAEYLISQ--GAHVGAVNSEGDTPLD  144 (291)
T ss_dssp             CTTCCBHHHHHHHTTCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHH
T ss_pred             CCCCCcHHHHHHhcCCceeeeeecccc-ccc--ccccccccccccccccccccchhhccccc--CcccccccccCccccc
Confidence            357899999999999999999999998 433  34677889999999999999999999876  2222            


Q ss_pred             ------------------------------------------------ccccCCCchhhHHHHhcCcHHHHHHHHHhCCC
Q 037194          121 ------------------------------------------------MLQDENGNTAFCFAAAVGAVDIANLMLKKNPS  152 (215)
Q Consensus       121 ------------------------------------------------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~  152 (215)
                                                                      ...+..|.||||+|+..|+.+++++|++.|++
T Consensus       145 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~d  224 (291)
T d1s70b_         145 IAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD  224 (291)
T ss_dssp             HCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC
T ss_pred             cccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceec
Confidence                                                            22345788999999999999999999999998


Q ss_pred             CCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHh
Q 037194          153 LLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVD  202 (215)
Q Consensus       153 ~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~  202 (215)
                       ++..+..|+||||+|+..|+.++|++|+++|+ ....+..|.|+++.|+.
T Consensus       225 -in~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e  274 (291)
T d1s70b_         225 -VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE  274 (291)
T ss_dssp             -TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             -ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence             78889999999999999999999999999998 66667777788888754

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.6e-22  Score=136.85  Aligned_cols=125  Identities=22%  Similarity=0.287  Sum_probs=114.8

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHH
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCF  133 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~  133 (215)
                      ..|+||||.|+ .|+.++++.|++.+ ...  ...+..+.++++.++..+...+++.|+..  +.+++..+..|.+|+|+
T Consensus        32 ~~g~TpL~~A~-~~~~ei~~~Ll~~~-a~~--~~~~~~~~~~l~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~  105 (156)
T d1ihba_          32 GFGRTALQVMK-LGNPEIARRLLLRG-ANP--DLKDRTGFAVIHDAARAGFLDTLQTLLEF--QADVNIEDNEGNLPLHL  105 (156)
T ss_dssp             TTSCCHHHHCC-SSCHHHHHHHHHTT-CCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHH
T ss_pred             Ccccccccccc-cccccccccccccc-ccc--ccccccCcccccccccccccccccccccc--ccccccccccccccccc
Confidence            57899999875 79999999999998 443  35688899999999999999999999998  88899999999999999


Q ss_pred             HHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcC
Q 037194          134 AAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKS  184 (215)
Q Consensus       134 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~  184 (215)
                      |+..++.+++++|++.++...+..|..|.||||+|+..++.+++++|+++|
T Consensus       106 a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_         106 AAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             ccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            999999999999999998557899999999999999999999999999986

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=4.9e-22  Score=135.75  Aligned_cols=123  Identities=22%  Similarity=0.180  Sum_probs=111.9

Q ss_pred             ccCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhh
Q 037194           52 LCCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAF  131 (215)
Q Consensus        52 ~~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l  131 (215)
                      ....|+||||+|+..++.+.++.++... ...  ......+.++++.++...+.+++++++..  +.+.+.+|..|+|||
T Consensus        30 ~~~~g~t~L~~a~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~g~T~L  104 (153)
T d1awcb_          30 TDWLGTSPLHLAAQYGHFSTTEVLLRAG-VSR--DARTKVDRTPLHMAASEGHANIVEVLLKH--GADVNAKDMLKMTAL  104 (153)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTSCCHH
T ss_pred             cccCCCcccccccccccccccccccccc-ccc--cccccccccccccccccccceeeeccccc--CCccccccccCchHH
Confidence            3457899999999999999999998876 332  23566788899999999999999999998  899999999999999


Q ss_pred             HHHHhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHH
Q 037194          132 CFAAAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFL  180 (215)
Q Consensus       132 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~L  180 (215)
                      |+|+..|+.+++++|++.|++ ++..|.+|.||||+|+.+|+.+++++|
T Consensus       105 ~~A~~~g~~~iv~~ll~~gad-~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_         105 HWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HhhhhcchhheeeeccccccC-CcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            999999999999999999999 799999999999999999999999977

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.88  E-value=1.5e-24  Score=167.53  Aligned_cols=125  Identities=18%  Similarity=0.134  Sum_probs=92.5

Q ss_pred             hcCCCCccHHHHHHhcCCHHHHHH---HHHccCCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCCCCCC--CCC
Q 037194           87 AITEGHQTVLHVATGAKQTSFVQQ---LLTFMDPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLLGIRG--SKN  161 (215)
Q Consensus        87 ~~~~~g~~~L~~a~~~g~~~~v~~---Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~--~~g  161 (215)
                      .++..|.|+||+|+.+|+.+++++   |+..  +++++.+|..|+||||+|+..|+.+++++|++.|++ ++..+  .+|
T Consensus        85 ~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~--~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~-~~~~~~~~~g  161 (346)
T d2ajaa1          85 KKGIKSEVICFVAAITGCSSALDTLCLLLTS--DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT-EIMAMIQAEN  161 (346)
T ss_dssp             HHTCCHHHHHHHHHHHCCHHHHHHHTTC--C--CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTT-THHHHHSHHH
T ss_pred             hccCCCCcHHHHHHHhCCHHHHHHHHHHHhC--CCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-ccccccccCC
Confidence            356678888888888888777665   5565  788888888888888888888888888888888877 55543  357


Q ss_pred             CCHHHHHHHhCCHHHHHHHhhcCC-C---CCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          162 MPPLYFAALFGQTDTASFLFHKSE-K---ELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       162 ~t~l~~a~~~g~~~~v~~Ll~~~~-~---~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      .||||+|+..|+.++|++|++.|+ .   ...+.++++++++|+..|+.+++++||+
T Consensus       162 ~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~  218 (346)
T d2ajaa1         162 YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD  218 (346)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred             CChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHh
Confidence            888888888888888888888876 1   2344556778888878888888888875

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.87  E-value=2e-23  Score=161.06  Aligned_cols=157  Identities=17%  Similarity=0.143  Sum_probs=95.0

Q ss_pred             cccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCc---ccccCCCchhh
Q 037194           55 SERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDL---MLQDENGNTAF  131 (215)
Q Consensus        55 ~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~---~~~~~~g~t~l  131 (215)
                      .|+||||+|+..|+.++|++|++.+ +.......+..|.||||+|+..|+.++|++|++.  +.+.   +..+..+.||+
T Consensus       125 ~g~taL~~Aa~~G~~~~v~~Ll~~g-~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~--~~~~~~~~~~~~~~~t~l  201 (346)
T d2ajaa1         125 ENYQAFRLAAENGHLHVLNRLCELA-PTEIMAMIQAENYHAFRLAAENGHLHVLNRLCEL--APTEATAMIQAENYYAFR  201 (346)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHSC-TTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHS--CGGGHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHcC-CCccccccccCCCChhHHHHHHhhHHHHHHHHHc--CCcccccccccCCCcchh
Confidence            5567777777777777777777766 4433222234466777777777777777777766  4432   23334455666


Q ss_pred             HHHHhcCcHHHHHHHHHhCCCC--------------------------------CCCCCCC----------------CCC
Q 037194          132 CFAAAVGAVDIANLMLKKNPSL--------------------------------LGIRGSK----------------NMP  163 (215)
Q Consensus       132 ~~a~~~~~~~~~~~Ll~~~~~~--------------------------------~~~~~~~----------------g~t  163 (215)
                      +.|+.+|+.+++++|++.|++.                                .......                +.+
T Consensus       202 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~  281 (346)
T d2ajaa1         202 WAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLR  281 (346)
T ss_dssp             HHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHH
T ss_pred             hHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccccchhhh
Confidence            6666677777777766543210                                0000001                124


Q ss_pred             HHHHHHHhCCHHHHHHHhhcCC-CC-----CCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          164 PLYFAALFGQTDTASFLFHKSE-KE-----LPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       164 ~l~~a~~~g~~~~v~~Ll~~~~-~~-----~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      +++.++..++.+++++|++.+. ..     ..+.++.|++|.|+..|+.+++++||.
T Consensus       282 ~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~  338 (346)
T d2ajaa1         282 NLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS  338 (346)
T ss_dssp             HHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTT
T ss_pred             HHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhC
Confidence            5555556666677777776655 11     123457789999999999999999985

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=1e-22  Score=154.34  Aligned_cols=140  Identities=13%  Similarity=0.059  Sum_probs=108.9

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCH-------HHHHHHHHccCCCCcccccC
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQT-------SFVQQLLTFMDPEDLMLQDE  125 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~-------~~v~~Ll~~~~~~~~~~~~~  125 (215)
                      ...|+||||+|+..|+.++|+.|++.| ...  ..++..|+||||.||..++.       ++++++.     ..++..|.
T Consensus       104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~g-ad~--~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~-----~~~~~~d~  175 (301)
T d1sw6a_         104 DEHGNTPLHWLTSIANLELVKHLVKHG-SNR--LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY-----PCLILEDS  175 (301)
T ss_dssp             STTCCCHHHHHHHTTCHHHHHHHHHTT-CCT--TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG-----GGGGEECT
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCC-CCC--CcCCcccccHHHHhhhcccchhhhhHHHHHHHHh-----hhhhhccc
Confidence            357899999999999999999999998 544  35788999999999987752       3444443     34567788


Q ss_pred             CCchhhHHHHhcCc----HH--------HHHHHHHhCCCC------------------------------------CCCC
Q 037194          126 NGNTAFCFAAAVGA----VD--------IANLMLKKNPSL------------------------------------LGIR  157 (215)
Q Consensus       126 ~g~t~l~~a~~~~~----~~--------~~~~Ll~~~~~~------------------------------------~~~~  157 (215)
                      .|+||||+++..+.    ..        ++.++...+...                                    ++.+
T Consensus       176 ~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~  255 (301)
T d1sw6a_         176 MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQ  255 (301)
T ss_dssp             TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCC
T ss_pred             ccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCccCC
Confidence            99999998876543    22        233343433221                                    3677


Q ss_pred             CCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHH
Q 037194          158 GSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITS  200 (215)
Q Consensus       158 ~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a  200 (215)
                      |..|+||||+|++.|+.++|++|+++|+ ....+..|.||++.|
T Consensus       256 D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A  299 (301)
T d1sw6a_         256 DSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG  299 (301)
T ss_dssp             CTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHc
Confidence            8999999999999999999999999999 777888888888766

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=3.3e-21  Score=131.56  Aligned_cols=117  Identities=15%  Similarity=0.123  Sum_probs=104.3

Q ss_pred             HHHHHHhcCCHHHHHHHHHccCCCCcccc------cCCCchhhHHHHhc---CcHHHHHHHHHhCCCCCCCCCCCCCCHH
Q 037194           95 VLHVATGAKQTSFVQQLLTFMDPEDLMLQ------DENGNTAFCFAAAV---GAVDIANLMLKKNPSLLGIRGSKNMPPL  165 (215)
Q Consensus        95 ~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~------~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~t~l  165 (215)
                      .|..|+..++...+..++..  +.+++..      +..|+||||+|+..   +..+++++|++.|++ ++.+|..|+|||
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-in~~d~~g~TpL   85 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYAD--GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTAL   85 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHT--TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHH
T ss_pred             HHHHHHHhCCHHHHHHHHHc--CCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCC-hhhhhhhhcccc
Confidence            46688899999988888887  6666544      67899999999975   678999999999999 799999999999


Q ss_pred             HHHHHhCCHHHHHHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhc
Q 037194          166 YFAALFGQTDTASFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFK  214 (215)
Q Consensus       166 ~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  214 (215)
                      |+|+..|+.+++++|+++|+ ....+..|.||++.|+..|+.+++++|++
T Consensus        86 h~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~  135 (154)
T d1dcqa1          86 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQ  135 (154)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             ccccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            99999999999999999999 77788889999999999999999999875

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.86  E-value=1.2e-21  Score=146.00  Aligned_cols=125  Identities=16%  Similarity=0.235  Sum_probs=104.6

Q ss_pred             CcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHc-------------------
Q 037194           54 CSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTF-------------------  114 (215)
Q Consensus        54 ~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~-------------------  114 (215)
                      ..|+||||+|+..|+.+++++|++.| ..+  ..++..|.|||++|+..++.++++++...                   
T Consensus        72 ~~G~TpLh~A~~~g~~~iv~~Ll~~G-ad~--n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  148 (277)
T d2fo1e1          72 CDENTPLMLAVLARRRRLVAYLMKAG-ADP--TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALM  148 (277)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTT-CCS--CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHH
T ss_pred             CCCCeeeccccccccccccccccccc-ccc--ccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHH
Confidence            58899999999999999999999987 432  23566677777777777776665555443                   


Q ss_pred             ------------------------------------------------------------cCCCCcccccCCCchhhHHH
Q 037194          115 ------------------------------------------------------------MDPEDLMLQDENGNTAFCFA  134 (215)
Q Consensus       115 ------------------------------------------------------------~~~~~~~~~~~~g~t~l~~a  134 (215)
                                                                                  ..+.+.+.+|..|+||||+|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A  228 (277)
T d2fo1e1         149 IVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLA  228 (277)
T ss_dssp             HHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHH
T ss_pred             HHHhcccccccccccccccccccccccccccccccccCCCCccccccccccccccccccccccccccccCCCCCCHHHHH
Confidence                                                                        01455677889999999999


Q ss_pred             HhcCcHHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhh
Q 037194          135 AAVGAVDIANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFH  182 (215)
Q Consensus       135 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~  182 (215)
                      +..|+.+++++|++.|++ ++..|..|.||||+|+..|+.++|++|++
T Consensus       229 ~~~g~~~iv~~Ll~~gad-in~~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         229 AQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             HHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHcCCHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            999999999999999999 79999999999999999999999999985

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.9e-21  Score=142.78  Aligned_cols=131  Identities=17%  Similarity=0.186  Sum_probs=111.9

Q ss_pred             cCcccHHHHHHHHcCCHHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcC----CHHHHHHHHHccCCCCcccccCCCc
Q 037194           53 CCSERLLLYKAALKGEMKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAK----QTSFVQQLLTFMDPEDLMLQDENGN  128 (215)
Q Consensus        53 ~~~g~~~L~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g----~~~~v~~Ll~~~~~~~~~~~~~~g~  128 (215)
                      ...|.||||.|+..|+.+++++|+++. ...+ ...+..|.++++.+...+    ...++++|++.  |++++.++..|.
T Consensus       145 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~-~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~--ga~~n~~~~~g~  220 (285)
T d1wdya_         145 RKGGATALMDAAEKGHVEVLKILLDEM-GADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDH--GADVNVRGERGK  220 (285)
T ss_dssp             TCCCCCHHHHHHHHTCHHHHHHHHHTS-CCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT--TCCSSCCCTTSC
T ss_pred             cccCchHHHHHHHcCCHHHHHHHHhcc-CCCc-ccccCCCCcccccccccccchHHHHHHHHHHHC--CCCCCccCCCCC
Confidence            346789999999999999999999875 2222 246777887766654443    45799999999  999999999999


Q ss_pred             hhhHHHHhcCcHHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCC
Q 037194          129 TAFCFAAAVGAVDIANLMLKK-NPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KEL  188 (215)
Q Consensus       129 t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~  188 (215)
                      ||||+|+..++.+++++|++. |++ ++..|.+|.||||+|+..|+.++|++|+++|+ ...
T Consensus       221 t~L~~a~~~~~~~~v~~lL~~~g~d-in~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~  281 (285)
T d1wdya_         221 TPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC  281 (285)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred             CccchhhhcCcHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence            999999999999999999985 677 89999999999999999999999999999998 444

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.84  E-value=5.3e-20  Score=131.63  Aligned_cols=142  Identities=17%  Similarity=0.281  Sum_probs=120.7

Q ss_pred             HHHHHHHHhhcchhhhhhhcCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcHH-------
Q 037194           69 MKEIEGLFEKDYRSIICAAITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAVD-------  141 (215)
Q Consensus        69 ~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~-------  141 (215)
                      .|+|+.|++.| +... ...|.+|.||||+||.+|+.+++++|+..  +.+++.++..+.++++.++..++..       
T Consensus         2 ~~~v~~Ll~~g-~din-~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~--g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (209)
T d1ot8a_           2 AQVISDLLAQG-AELN-ATMDKTGETSLHLAARFARADAAKRLLDA--GADANSQDNTGRTPLHAAVAADAMGVFQILLR   77 (209)
T ss_dssp             HHHHHHHHHHH-HHHH-HHHHHHCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHHHHHHCC-CCcC-cCcCCCCCCHHHHHHHcCCHHHHHHHHhh--cccccccccccccccccccccccccccccccc
Confidence            47899999999 6543 24688999999999999999999999999  8888888888888888776555433       


Q ss_pred             ---------------------------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHhCCHHHHHHHhhcCC-CCCCCCCC
Q 037194          142 ---------------------------IANLMLKKNPSLLGIRGSKNMPPLYFAALFGQTDTASFLFHKSE-KELPTEDR  193 (215)
Q Consensus       142 ---------------------------~~~~Ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~v~~Ll~~~~-~~~~~~~~  193 (215)
                                                 ..+.|...+++ ++..+..|.|||++++..+..++++.+++.+. ....+..|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~-~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g  156 (209)
T d1ot8a_          78 NRATNLNARMHDGTTPLILAARLAIEGMVEDLITADAD-INAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKD  156 (209)
T ss_dssp             CTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred             ccccccccccccccccccccccccchhhhhhhhhhccc-ccccCCCCCCcchhhcccCcceeeeeecccccccccccccc
Confidence                                       34567777777 68889999999999999999999999999998 66677778


Q ss_pred             chHHHHHHhcCchhHHHHhhcC
Q 037194          194 KVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       194 ~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      .+|+|.|+..|..++++.||++
T Consensus       157 ~TpL~~A~~~g~~~~v~~Ll~~  178 (209)
T d1ot8a_         157 ETPLFLAAREGSYEASKALLDN  178 (209)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHT
T ss_pred             ccccchhccccHHHHHHHHHHC
Confidence            8999999999999999999874

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.2e-20  Score=131.73  Aligned_cols=126  Identities=14%  Similarity=0.193  Sum_probs=108.6

Q ss_pred             CCCccHHHHHHhcCCHHHHHHHHHcc--CCCCcccccCCCchhhHHHHhcCcHHHHHHHHHhCCCCC-------------
Q 037194           90 EGHQTVLHVATGAKQTSFVQQLLTFM--DPEDLMLQDENGNTAFCFAAAVGAVDIANLMLKKNPSLL-------------  154 (215)
Q Consensus        90 ~~g~~~L~~a~~~g~~~~v~~Ll~~~--~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~-------------  154 (215)
                      .+|.||||+||.+|+.++++.|++..  .+++++.+|..|+||||+|+..|+.+++++|++.|+...             
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a   80 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA   80 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccccccccccccccccccccccccc
Confidence            36999999999999999999987621  288999999999999999999999999999999886521             


Q ss_pred             ---------------------------------------------------------CCCCCCCCCHHHHHHHhCCHHHH
Q 037194          155 ---------------------------------------------------------GIRGSKNMPPLYFAALFGQTDTA  177 (215)
Q Consensus       155 ---------------------------------------------------------~~~~~~g~t~l~~a~~~g~~~~v  177 (215)
                                                                               ......+.++++.|+..+...++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~  160 (228)
T d1k1aa_          81 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV  160 (228)
T ss_dssp             HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred             cccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhh
Confidence                                                                     22345788999999999999999


Q ss_pred             HHHhhcCC-CCCCCCCCchHHHHHHhcCchhHHHHhhcC
Q 037194          178 SFLFHKSE-KELPTEDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       178 ~~Ll~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      +++++++. ....+..+.++++.|+..|..+++++||++
T Consensus       161 ~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~  199 (228)
T d1k1aa_         161 QLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRS  199 (228)
T ss_dssp             HHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT
T ss_pred             hhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHC
Confidence            99999988 666677788899999999999999999864

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=1.2e-18  Score=131.59  Aligned_cols=122  Identities=13%  Similarity=0.151  Sum_probs=95.5

Q ss_pred             cCCCCccHHHHHHhcCCHHHHHHHHHccCCCCcccccCCCchhhHHHHhcCcH-------HHHHHHHHhCCCCCCCCCCC
Q 037194           88 ITEGHQTVLHVATGAKQTSFVQQLLTFMDPEDLMLQDENGNTAFCFAAAVGAV-------DIANLMLKKNPSLLGIRGSK  160 (215)
Q Consensus        88 ~~~~g~~~L~~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~-------~~~~~Ll~~~~~~~~~~~~~  160 (215)
                      .|..|+||||+||..|+.++|++|++.  |++++.+|..|+||||.|+..++.       ++++++..   . ....|..
T Consensus       103 ~D~~G~T~LH~Aa~~g~~~~v~~Ll~~--gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---~-~~~~d~~  176 (301)
T d1sw6a_         103 VDEHGNTPLHWLTSIANLELVKHLVKH--GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---C-LILEDSM  176 (301)
T ss_dssp             CSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---G-GGEECTT
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---h-hhhcccc
Confidence            378899999999999999999999999  999999999999999999987752       34444433   2 4667888


Q ss_pred             CCCHHHHHHHhCC----HH--------HHHHHhhcCC--------------------------------------CCCCC
Q 037194          161 NMPPLYFAALFGQ----TD--------TASFLFHKSE--------------------------------------KELPT  190 (215)
Q Consensus       161 g~t~l~~a~~~g~----~~--------~v~~Ll~~~~--------------------------------------~~~~~  190 (215)
                      |+||||+++..+.    ..        ++.+++..+.                                      ...++
T Consensus       177 g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D  256 (301)
T d1sw6a_         177 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQD  256 (301)
T ss_dssp             CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCC
T ss_pred             cCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCccCCC
Confidence            9999999886554    22        2334444332                                      13346


Q ss_pred             CCCchHHHHHHhcCchhHHHHhhcC
Q 037194          191 EDRKVIFITSVDTGLYGKYQDIFKR  215 (215)
Q Consensus       191 ~~~~~~~~~a~~~~~~~~~~~ll~~  215 (215)
                      .+|.|++|.|+..|+.+++++||++
T Consensus       257 ~~G~TpLh~A~~~g~~~iv~~Ll~~  281 (301)
T d1sw6a_         257 SNGDTCLNIAARLGNISIVDALLDY  281 (301)
T ss_dssp             TTSCCHHHHHHHHCCHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            7789999999999999999999974