Citrus Sinensis ID: 037234

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-
Protein Sequence
MISSKRKKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEEDDEPASEIEHDGGILQ
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHccccccccEEEEccccccHcccccEEEEEcccccccHHHHHHHHHHHcccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
misskrkkcgkpfavkgdwrthekncgriwycvcgsdfkhkrSLKDHIKAFGhghaalgiecfeeddepaseiehdggilq
Flexible Loop (DISEMBL)
misskrkkcgkpfavkgdwrthekncGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEEDDEPASeiehdggilq
Low Complexity Region (SEG)
MISSKRKKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEEDDEPASEIEHDGGILQ
Disordered region (IsUnstruct)
***********PFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECF******************
Disordered Region (DISOPRED)
**SSKRKKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAF******************************
Disordered Region (DISEMBL)
**********KPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEEDD**************
Disordered Region (DISPRO)
****KRKKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGI*********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MISSKRKKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEEDDEPASEIEHDGGILQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	81	2.2.26 [Sep-21-2011]
Q8VWG3	303	Protein TRANSPARENT TESTA	no	no	0.839	0.224	0.661	1e-19
Q2QX40	465	Zinc finger protein STAR3	no	no	0.629	0.109	0.473	5e-05
Q943I6	522	Zinc finger protein STOP1	no	no	0.543	0.084	0.478	0.0001
Q6P9S1	818	ATM interactor OS=Mus mus	yes	no	0.604	0.059	0.326	0.0001
Q700D2	503	Zinc finger protein JACKD	no	no	0.567	0.091	0.458	0.0002
Q9FFH3	466	Zinc finger protein NUTCR	no	no	0.543	0.094	0.434	0.0004
Q9ZWA6	506	Zinc finger protein MAGPI	no	no	0.567	0.090	0.437	0.0004
Q9C8N5	499	Protein SENSITIVE TO PROT	no	no	0.543	0.088	0.478	0.0004
O43313	823	ATM interactor OS=Homo sa	yes	no	0.604	0.059	0.306	0.0007

>sp|Q8VWG3|TT1_ARATH Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 49/68 (72%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           + CGK  AVKGDWRTHEKNCG+ W CVCGSDFKHKRSLKDH+KAFG GH       FEE 
Sbjct: 232 RLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPYPTGLFEEQ 291

Query: 67  DEPASEIE 74
              +S  E
Sbjct: 292 ASNSSVSE 299

May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat.
Arabidopsis thaliana (taxid: 3702)

>sp|Q2QX40|ART1_ORYSJ Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 6/57 (10%)

Query: 5   KRKKCG----KPFAVKGDWRTHEKNCGR-IWYCVCGSDFKHKRSLKDHIKAFGHGHA 56
           KR  CG    K F+V  D +THEK+CGR  W C CG+ F  K  L  H+  F  GHA
Sbjct: 317 KRHVCGRCGAKRFSVMADLKTHEKHCGRDRWLCSCGTSFSRKDKLFAHVALF-QGHA 372

Transcriptional activator that regulates the expression of genes involved in aluminum (Al) tolerance. Binds to the promoter of STAR1 and regulates transcript expression of STAR1 STAR2 and ART1 required for Al tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q943I6|STOP1_ORYSJ Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 11  KPFAVKGDWRTHEKNCGR-IWYCVCGSDFKHKRSLKDHIKAFGHGH 55
           K F+V  D +THEK+CGR  W C CG+ F  K  L  H+  F  GH
Sbjct: 377 KKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALF-QGH 421

Probable transcription factor that may be involved in aluminum tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6P9S1|ATMIN_MOUSE ATM interactor OS=Mus musculus GN=Atmin PE=2 SV=2

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 27/49 (55%)

Query: 5   KRKKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGH 53
           K  KC   +  + D + HE++CG+ + C CG  +  + +L+ HI   GH
Sbjct: 162 KCSKCSNSYGTEWDLKRHEEDCGKTFQCTCGCPYASRTALQSHIYRTGH 210

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Mus musculus (taxid: 10090)

>sp|Q700D2|JKD_ARATH Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 5   KRKKCGKPFAVKGDWRTHEKNCG-RIWYCVCGSDFKHKRSLKDHIKAF 51
           K +KC K +AV+ DW+ H K CG R + C CG+ F  K S   H +AF
Sbjct: 160 KCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITH-RAF 206

Probable transcription factor that regulates tissue boundaries and asymmetric cell division by a rapid up-regulation of 'SCARECROW' (SCR), thus controlling the nuclear localization of 'SHORT-ROOT' (SHR) and restricting its action. Required for radial patterning and stem cell maintenance. Counteracted by 'MAGPIE' (MGP).

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 7   KKCGKPFAVKGDWRTHEKNCG-RIWYCVCGSDFKHKRSLKDHIKAF 51
           +KC K +AV+ DW+ H K CG R + C CG+ F  + S   H +AF
Sbjct: 145 EKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITH-RAF 189

Putative transcription factor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 5   KRKKCGKPFAVKGDWRTHEKNCG-RIWYCVCGSDFKHKRSLKDHIKAF 51
           K +KC K +AV+ DW+ H K CG R + C CG+ F  + S   H +AF
Sbjct: 147 KCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITH-RAF 193

Probable transcription factor that regulates tissue boundaries and asymmetric cell division. Might be involved in the sequestration of 'SHORT-ROOT' to the nucleus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 11  KPFAVKGDWRTHEKNCGR-IWYCVCGSDFKHKRSLKDHIKAFGHGH 55
           K F+V  D +THEK+CG+  W C CG+ F  K  L  HI  F  GH
Sbjct: 341 KKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALF-QGH 385

Probable transcription factor. Plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation.

Arabidopsis thaliana (taxid: 3702)

>sp|O43313|ATMIN_HUMAN ATM interactor OS=Homo sapiens GN=ATMIN PE=1 SV=2

 Score = 42.7 bits (99), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 26/49 (53%)

Query: 5   KRKKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGH 53
           K  KC   +  + D + H ++CG+ + C CG  +  + +L+ HI   GH
Sbjct: 166 KCSKCSNSYGTEWDLKRHAEDCGKTFRCTCGCPYASRTALQSHIYRTGH 214

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	81
255571646	329	TRANSPARENT TESTA 1 protein, putative [R	0.864	0.212	0.885	9e-33
297746348	360	unnamed protein product [Vitis vinifera]	0.864	0.194	0.857	1e-32
255571578	344	TRANSPARENT TESTA 1 protein, putative [R	0.925	0.218	0.773	4e-31
225435486	334	PREDICTED: protein TRANSPARENT TESTA 1 [	0.876	0.212	0.845	8e-31
357514827	340	Zinc finger-like protein [Medicago trunc	0.888	0.211	0.819	6e-30
225441744	345	PREDICTED: protein TRANSPARENT TESTA 1 [	0.925	0.217	0.773	2e-29
297739699	315	unnamed protein product [Vitis vinifera]	0.925	0.238	0.773	4e-29
224075786	246	predicted protein [Populus trichocarpa]	0.925	0.304	0.786	6e-29
224139848	358	predicted protein [Populus trichocarpa]	0.925	0.209	0.746	6e-29
356546398	357	PREDICTED: protein TRANSPARENT TESTA 1-l	0.876	0.198	0.802	1e-28

>gi|255571646|ref|XP_002526768.1| TRANSPARENT TESTA 1 protein, putative [Ricinus communis] gi|223533895|gb|EEF35622.1| TRANSPARENT TESTA 1 protein, putative [Ricinus communis]

 Score =  144 bits (362), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 62/70 (88%), Positives = 67/70 (95%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           +KCGK FAVKGDWRTHEKNCG++WYCVCGSDFKHKRSLKDHIKAFGHGHAALGI+C EE+
Sbjct: 256 RKCGKSFAVKGDWRTHEKNCGKVWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIDCLEEE 315

Query: 67  DEPASEIEHD 76
           DEPASEIE D
Sbjct: 316 DEPASEIELD 325

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746348|emb|CBI16404.3| unnamed protein product [Vitis vinifera]

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/70 (85%), Positives = 66/70 (94%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           +KCGK FAV+GDWRTHEKNCG++WYC CGSDFKHKRSLKDHIKAFGHGHAA GI+CFEE+
Sbjct: 259 RKCGKAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIKAFGHGHAAYGIDCFEEE 318

Query: 67  DEPASEIEHD 76
           DEPASEIE D
Sbjct: 319 DEPASEIEQD 328

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571578|ref|XP_002526735.1| TRANSPARENT TESTA 1 protein, putative [Ricinus communis] gi|223533924|gb|EEF35649.1| TRANSPARENT TESTA 1 protein, putative [Ricinus communis]

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/75 (77%), Positives = 68/75 (90%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           +KCGK FAV+GDWRTHEKNCG++WYC+CGSDFKHKRSLKDHIKAFG+GHAA GI+ FEE+
Sbjct: 270 RKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYGIDGFEEE 329

Query: 67  DEPASEIEHDGGILQ 81
           DEPASE+E D   +Q
Sbjct: 330 DEPASEVEQDNVSVQ 344

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435486|ref|XP_002282950.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]

 Score =  137 bits (345), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 60/71 (84%), Positives = 66/71 (92%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           +KCGK FAV+GDWRTHEKNCG++WYC CGSDFKHKRSLKDHIKAFGHGHAA GI+CFEE+
Sbjct: 259 RKCGKAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIKAFGHGHAAYGIDCFEEE 318

Query: 67  DEPASEIEHDG 77
           DEPASEIE D 
Sbjct: 319 DEPASEIEQDN 329

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357514827|ref|XP_003627702.1| Zinc finger-like protein [Medicago truncatula] gi|355521724|gb|AET02178.1| Zinc finger-like protein [Medicago truncatula]

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 66/72 (91%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           +KCGK FAVKGDWRTHEKNCG+IWYC+CGSDFKHKRSLKDHIKAFG+GH A GI+C +E+
Sbjct: 266 RKCGKSFAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHIKAFGYGHGAFGIDCLQEE 325

Query: 67  DEPASEIEHDGG 78
           DE  SEIEHDGG
Sbjct: 326 DEAGSEIEHDGG 337

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441744|ref|XP_002277537.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 58/75 (77%), Positives = 68/75 (90%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           +KCGK FAV+GDWRTHEKNCG++WYC+CGSDFKHKRSLKDHIKAFG+GHAA GI+ FEE+
Sbjct: 271 RKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYGIDGFEEE 330

Query: 67  DEPASEIEHDGGILQ 81
           DEPASE+E D   +Q
Sbjct: 331 DEPASEVEQDDESMQ 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739699|emb|CBI29881.3| unnamed protein product [Vitis vinifera]

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 58/75 (77%), Positives = 68/75 (90%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           +KCGK FAV+GDWRTHEKNCG++WYC+CGSDFKHKRSLKDHIKAFG+GHAA GI+ FEE+
Sbjct: 241 RKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYGIDGFEEE 300

Query: 67  DEPASEIEHDGGILQ 81
           DEPASE+E D   +Q
Sbjct: 301 DEPASEVEQDDESMQ 315

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075786|ref|XP_002304767.1| predicted protein [Populus trichocarpa] gi|222842199|gb|EEE79746.1| predicted protein [Populus trichocarpa]

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 59/75 (78%), Positives = 66/75 (88%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           +KCGK FAV+GDWRTHEKNCG++WYC CGSDFKHKRSLKDHIK+FGHGH+A GI+ FEED
Sbjct: 170 RKCGKAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKSFGHGHSANGIDFFEED 229

Query: 67  DEPASEIEHDGGILQ 81
           DEPASEIE D    Q
Sbjct: 230 DEPASEIEQDNDSTQ 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139848|ref|XP_002323306.1| predicted protein [Populus trichocarpa] gi|222867936|gb|EEF05067.1| predicted protein [Populus trichocarpa]

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 56/75 (74%), Positives = 66/75 (88%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           +KCGK FAV+GDWRTHEKNCG++WYC+CGSDFKHKRSLKDHIKAFG GHAA G + FEE+
Sbjct: 284 RKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGNDGFEEE 343

Query: 67  DEPASEIEHDGGILQ 81
           DEP+SE+E D   +Q
Sbjct: 344 DEPSSEVEQDNESMQ 358

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546398|ref|XP_003541613.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 57/71 (80%), Positives = 65/71 (91%)

Query: 7   KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
           +KCGK FAVKGDWRTHEKNCG+IWYC+CGSDFKHKRSLKDHIKAFG GH + GI+C +E+
Sbjct: 283 RKCGKAFAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHIKAFGFGHGSFGIDCLQEE 342

Query: 67  DEPASEIEHDG 77
           DE AS+IEHDG
Sbjct: 343 DEAASDIEHDG 353

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	81
TAIR|locus:2076641	383	NTT "AT3G57670" [Arabidopsis t	0.839	0.177	0.794	2.3e-30
TAIR|locus:2205334	302	DOT5 "DEFECTIVELY ORGANIZED TR	0.876	0.235	0.666	3.6e-25
TAIR|locus:2091931	412	WIP4 "AT3G20880" [Arabidopsis	0.814	0.160	0.695	4.6e-25
TAIR|locus:2008281	337	WIP5 "AT1G51220" [Arabidopsis	0.839	0.201	0.694	5.9e-25
TAIR|locus:2200003	337	WIP3 "AT1G08290" [Arabidopsis	0.753	0.181	0.718	3.8e-23
TAIR|locus:2008386	303	TT1 "transparent testa 1" [Ara	0.814	0.217	0.681	1.5e-21
UNIPROTKB|Q2QX40	465	STAR3 "Zinc finger protein STA	0.592	0.103	0.490	4.7e-07
TAIR|locus:2172701	373	AT5G22890 [Arabidopsis thalian	0.580	0.126	0.48	5.4e-07
UNIPROTKB|Q943I6	522	LOC_Os01g65080 "Zinc finger pr	0.567	0.088	0.469	8.6e-06
TAIR|locus:2036303	499	STOP1 "AT1G34370" [Arabidopsis	0.617	0.100	0.452	1.3e-05

TAIR|locus:2076641 NTT "AT3G57670" [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 54/68 (79%), Positives = 64/68 (94%)

Query:     7 KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
             +KCGK FAV+GDWRTHEKNCG++WYC+CGSDFKHKRSLKDHIKAFG+GH A GI+ F+E+
Sbjct:   304 RKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEE 363

Query:    67 DEPASEIE 74
             DEPASE+E
Sbjct:   364 DEPASEVE 371

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009860 "pollen tube growth" evidence=RCA;IMP

GO:0010500 "transmitting tissue development" evidence=IMP

GO:0009827 "plant-type cell wall modification" evidence=RCA

TAIR|locus:2205334 DOT5 "DEFECTIVELY ORGANIZED TRIBUTARIES 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 52/78 (66%), Positives = 60/78 (76%)

Query:     6 RKKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAA-------L 58
             RKKC K FAV+GDWRTHEKNCG++W+CVCGSDFKHKRSLKDH++AFG GHAA       +
Sbjct:   189 RKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTVSDRVV 248

Query:    59 GIECFEEDDEPASEIEHD 76
             GI   +EDDE   E E D
Sbjct:   249 GIGDADEDDEEEEEEEED 266

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010087 "phloem or xylem histogenesis" evidence=IMP

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0010588 "cotyledon vascular tissue pattern formation" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0048367 "shoot system development" evidence=IMP

TAIR|locus:2091931 WIP4 "AT3G20880" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query:     7 KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHA-ALGIECFEE 65
             ++CGK FAVKGDWRTHEKNCG++WYC CGSDFKHKRSLKDH+KAFG+GH    GI+   E
Sbjct:   343 RRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGID--HE 400

Query:    66 DDEPASEIE 74
             ++E AS++E
Sbjct:   401 EEEAASDVE 409

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2008281 WIP5 "AT1G51220" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 50/72 (69%), Positives = 57/72 (79%)

Query:     7 KKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED 66
             + CGK FAVKGDWRTHEKNCG++WYC CGSDFKHKRSLKDH+KAFG+GH   GI+ F  D
Sbjct:   265 RMCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGD 324

Query:    67 DEP----ASEIE 74
              E     AS+IE
Sbjct:   325 HEDYYDAASDIE 336

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2200003 WIP3 "AT1G08290" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 46/64 (71%), Positives = 53/64 (82%)

Query:     8 KCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHA---ALGIECFE 64
             KCGK  AVKGDWRTHEKNCG++WYC CGSDFKHKRSLKDHI++FG GH+   +L  + FE
Sbjct:   269 KCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFE 328

Query:    65 EDDE 68
             ED E
Sbjct:   329 EDTE 332

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2008386 TT1 "transparent testa 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 45/66 (68%), Positives = 48/66 (72%)

Query:     9 CGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEEDDE 68
             CGK  AVKGDWRTHEKNCG+ W CVCGSDFKHKRSLKDH+KAFG GH       FEE   
Sbjct:   234 CGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPYPTGLFEEQAS 293

Query:    69 PASEIE 74
              +S  E
Sbjct:   294 NSSVSE 299

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA;TAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS

GO:0009813 "flavonoid biosynthetic process" evidence=IMP

UNIPROTKB|Q2QX40 STAR3 "Zinc finger protein STAR3" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 124 (48.7 bits), Expect = 4.7e-07, P = 4.7e-07
 Identities = 25/51 (49%), Positives = 31/51 (60%)

Query:     8 KCG-KPFAVKGDWRTHEKNCGRI-WYCVCGSDFKHKRSLKDHIKAFGHGHA 56
             +CG K F+V  D +THEK+CGR  W C CG+ F  K  L  H+  F  GHA
Sbjct:   323 RCGAKRFSVMADLKTHEKHCGRDRWLCSCGTSFSRKDKLFAHVALF-QGHA 372

GO:0005634 "nucleus" evidence=IDA

GO:0010044 "response to aluminum ion" evidence=IMP

GO:0043620 "regulation of DNA-dependent transcription in response to stress" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2172701 AT5G22890 [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 5.4e-07, P = 5.4e-07
 Identities = 24/50 (48%), Positives = 30/50 (60%)

Query:     7 KKCG-KPFAVKGDWRTHEKNCGRI-WYCVCGSDFKHKRSLKDHIKAF-GH 53
             ++C  K F+V  D RTHEK+CG I W C CG+ F  K  L  H+  F GH
Sbjct:   309 RRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLFLGH 358

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

UNIPROTKB|Q943I6 LOC_Os01g65080 "Zinc finger protein STOP1 homolog" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 113 (44.8 bits), Expect = 8.6e-06, P = 8.6e-06
 Identities = 23/49 (46%), Positives = 29/49 (59%)

Query:     8 KCG-KPFAVKGDWRTHEKNCGRI-WYCVCGSDFKHKRSLKDHIKAF-GH 53
             +C  K F+V  D +THEK+CGR  W C CG+ F  K  L  H+  F GH
Sbjct:   373 RCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGH 421

GO:0005634 "nucleus" evidence=IC

TAIR|locus:2036303 STOP1 "AT1G34370" [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 24/53 (45%), Positives = 31/53 (58%)

Query:    11 KPFAVKGDWRTHEKNCGRI-WYCVCGSDFKHKRSLKDHIKAFGHGHA-ALGIE 61
             K F+V  D +THEK+CG+  W C CG+ F  K  L  HI  F  GH  A+ +E
Sbjct:   341 KKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALF-QGHTPAIPLE 392

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP;TAS

GO:0010044 "response to aluminum ion" evidence=IMP

GO:0010447 "response to acidity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	81
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.71
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.54
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.49
PHA02768	55	hypothetical protein; Provisional	99.2
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.18
KOG3576	267	consensus Ovo and related transcription factors [T	99.15
PHA00733	128	hypothetical protein	99.04
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.92
KOG3576	267	consensus Ovo and related transcription factors [T	98.89
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.86
PHA00616	44	hypothetical protein	98.83
PHA00732	79	hypothetical protein	98.67
KOG3608	467	consensus Zn finger proteins [General function pre	98.57
PHA02768	55	hypothetical protein; Provisional	98.42
KOG3608	467	consensus Zn finger proteins [General function pre	98.34
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.3
PLN03086	567	PRLI-interacting factor K; Provisional	98.25
PHA00733	128	hypothetical protein	98.23
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.23
PHA00616	44	hypothetical protein	98.18
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.14
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.11
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.1
PLN03086	567	PRLI-interacting factor K; Provisional	97.98
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.91
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.79
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.78
KOG3993	500	consensus Transcription factor (contains Zn finger	97.68
smart00355	26	ZnF_C2H2 zinc finger.	97.36
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.36
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.34
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.32
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.15
PHA00732	79	hypothetical protein	97.14
smart00355	26	ZnF_C2H2 zinc finger.	96.99
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.83
KOG3993	500	consensus Transcription factor (contains Zn finger	96.8
PRK04860	160	hypothetical protein; Provisional	96.78
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.76
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.14
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.01
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.6
KOG2893	341	consensus Zn finger protein [General function pred	95.55
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.14
PRK04860	160	hypothetical protein; Provisional	95.12
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.01
COG5189	423	SFP1 Putative transcriptional repressor regulating	93.91
KOG2186	276	consensus Cell growth-regulating nucleolar protein	92.74
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	91.96
KOG1146	1406	consensus Homeobox protein [General function predi	91.3
COG5048	467	FOG: Zn-finger [General function prediction only]	90.44
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	86.52
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	86.35
COG4049	65	Uncharacterized protein containing archaeal-type C	86.05
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	85.59
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	84.0
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	83.76
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	83.17
PHA00626	59	hypothetical protein	82.76
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	82.69
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	82.1
PF04606	47	Ogr_Delta: Ogr/Delta-like zinc finger; InterPro: I	81.25
PF15269	54	zf-C2H2_7: Zinc-finger	80.84
PRK09678	72	DNA-binding transcriptional regulator; Provisional	80.81
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	80.67
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	80.65

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.71  E-value=4.9e-18  Score=103.36  Aligned_cols=61  Identities=18%  Similarity=0.352  Sum_probs=57.2

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      |++|..|||.|...+.|+.|+|+  |+|||.| .|+++|..++||+.||++| .+.|+|.|..+.
T Consensus       187 ~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTH-S~~K~~qC~~C~  250 (279)
T KOG2462|consen  187 PCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTH-SDVKKHQCPRCG  250 (279)
T ss_pred             CcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhh-cCCccccCcchh
Confidence            68899999999999999999996  8999999 9999999999999999999 899999997654

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.54  E-value=4.5e-15  Score=90.54  Aligned_cols=63  Identities=21%  Similarity=0.387  Sum_probs=58.2

Q ss_pred             CccccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      +.+.|..|+|.|+....|..|++++.-+.+| +||+.|.+.=-|+.|+|+| +|||||.|.-+..
T Consensus       160 ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTH-TGEKPF~C~hC~k  223 (279)
T KOG2462|consen  160 KAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTH-TGEKPFSCPHCGK  223 (279)
T ss_pred             ccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccccc-cCCCCccCCcccc
Confidence            4678999999999999999999998889999 9999999999999999999 9999999976654

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.49  E-value=3.9e-15  Score=100.27  Aligned_cols=61  Identities=23%  Similarity=0.462  Sum_probs=57.2

Q ss_pred             ccccCcCCcCCCChhHHHHHHH--hcCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEK--NCGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~--~~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      +|.|..|.|.|.-.+.|.+|..  +|.+||+| +|.++|.++..|+.|+|+| .|+|||.||.+-
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLH-SGEKPfQCdKCl  957 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLH-SGEKPFQCDKCL  957 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhc-cCCCcchhhhhh
Confidence            6899999999999999999998  48999999 9999999999999999999 999999998764

>PHA02768 hypothetical protein; Provisional

Probab=99.20  E-value=5.6e-12  Score=60.45  Aligned_cols=43  Identities=12%  Similarity=0.087  Sum_probs=38.9

Q ss_pred             ccccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCChhHHH
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHKRSLK   45 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~~~l~   45 (81)
                      -|.|+.||+.|....+|..|++++.++++| .|++.|...+.|+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcCCcccCCcccceecccceeE
Confidence            478999999999999999999998789999 9999999887764

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.18  E-value=1.2e-11  Score=83.89  Aligned_cols=61  Identities=25%  Similarity=0.439  Sum_probs=54.2

Q ss_pred             ccccCcCCcCCCChhHHHHHHHhc---------------CCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKNC---------------GRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~~---------------~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      -|.|..|..+|.....|.+|+.++               -+-|+| .|+++|..+..|+.|+|+| .|+|||.|..+.
T Consensus       240 nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIH-SGEKPfeCpnCk  316 (1007)
T KOG3623|consen  240 NFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIH-SGEKPFECPNCK  316 (1007)
T ss_pred             CCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheee-cCCCCcCCcccc
Confidence            467999999999999999999741               256899 9999999999999999999 899999998765

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.15  E-value=4.3e-12  Score=75.23  Aligned_cols=60  Identities=25%  Similarity=0.428  Sum_probs=34.5

Q ss_pred             cccCcCCcCCCChhHHHHHHHhc--CCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKNC--GRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~~--~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      |.|..|+|.|.....|.+|++.+  .+.+.| .||+.|...-.|++|+|+| +|-+||.|..++
T Consensus       118 ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rth-tgvrpykc~~c~  180 (267)
T KOG3576|consen  118 FTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTH-TGVRPYKCSLCE  180 (267)
T ss_pred             eeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccc-cCccccchhhhh
Confidence            45666666666666666665532  344555 6666666666666666666 566666555444

>PHA00733 hypothetical protein

Probab=99.04  E-value=5.1e-10  Score=62.56  Aligned_cols=50  Identities=24%  Similarity=0.401  Sum_probs=40.5

Q ss_pred             CccccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +||.|..|++.|.....|..|+++...++.| .|++.|.....|..|+...
T Consensus        72 kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H~~~~  122 (128)
T PHA00733         72 SPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDHVCKK  122 (128)
T ss_pred             CCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHHHHHh
Confidence            5788888888888888888888765567888 8888888888888887755

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.92  E-value=5.1e-10  Score=76.86  Aligned_cols=55  Identities=20%  Similarity=0.428  Sum_probs=49.7

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCC
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAAL   58 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~   58 (81)
                      .+.|.+||+.|...+.|.+|+++  +++||.| .|++.|..+.+|+.||.+| .+..|.
T Consensus       879 ~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH-~w~q~~  936 (958)
T KOG1074|consen  879 AHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTH-MWVQPP  936 (958)
T ss_pred             hhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccc-cccCCC
Confidence            36799999999999999999997  6899999 9999999999999999999 565544

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.89  E-value=3.9e-10  Score=67.06  Aligned_cols=50  Identities=28%  Similarity=0.501  Sum_probs=45.7

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |-|.|..||+.|.....|++|+++  |.+||+| .|+++|+++-+|..|++.-
T Consensus       144 kr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kv  196 (267)
T KOG3576|consen  144 KRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKV  196 (267)
T ss_pred             HHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHH
Confidence            357799999999999999999996  7899999 9999999999999997755

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.86  E-value=4.2e-10  Score=77.27  Aligned_cols=49  Identities=31%  Similarity=0.576  Sum_probs=46.1

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +++|..|.|.|...+.|+.|.|+  |++||+| +||.+|+++.+|+.|...|
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH  404 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRH  404 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeec
Confidence            57899999999999999999995  8999999 9999999999999998877

>PHA00616 hypothetical protein

Probab=98.83  E-value=1.5e-09  Score=49.85  Aligned_cols=32  Identities=28%  Similarity=0.734  Sum_probs=27.9

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      ||+| .||+.|...++|..|++.| +|++++.++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~-hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSV-HKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHh-cCCCcccee
Confidence            6789 9999999999999999998 899888765

>PHA00732 hypothetical protein

Probab=98.67  E-value=1.8e-08  Score=52.02  Aligned_cols=46  Identities=20%  Similarity=0.351  Sum_probs=38.1

Q ss_pred             ccccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ||.|..|++.|.....|..|++....++.| .|++.|.   .+..|.+..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeC---Chhhhhccc
Confidence            689999999999999999999853346799 9999998   467777543

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.57  E-value=3.1e-08  Score=63.16  Aligned_cols=55  Identities=15%  Similarity=0.288  Sum_probs=26.5

Q ss_pred             cccCcCCcCCCChhHHHHHHHh---cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKN---CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~---~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      |+|+.|.......+.|..|++.   ..+||+| .|...|.+.+.|..|..+| + +..|.|
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~H-S-~~~y~C  322 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVH-S-KTVYQC  322 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhc-c-ccceec
Confidence            4455555444444555555543   2345555 5555555555555555544 2 334444

>PHA02768 hypothetical protein; Provisional

Probab=98.42  E-value=2.2e-07  Score=44.63  Aligned_cols=33  Identities=18%  Similarity=0.555  Sum_probs=26.9

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      -|.| .||+.|...++|..|+++| +  ++|.|..+.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H-~--k~~kc~~C~   38 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKH-N--TNLKLSNCK   38 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhc-C--CcccCCccc
Confidence            4789 9999999999999999999 5  466554443

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.34  E-value=9.1e-07  Score=56.63  Aligned_cols=64  Identities=19%  Similarity=0.254  Sum_probs=57.5

Q ss_pred             CccccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      .+|.|..|-|.|.....|..|+..+..-|+| +|.......+.|..|++.-+...|||.||.++.
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~  300 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDT  300 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCccccchhh
Confidence            4789999999999999999999877788999 999999999999999997768899999998874

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.30  E-value=7.9e-07  Score=36.56  Aligned_cols=21  Identities=29%  Similarity=0.738  Sum_probs=13.3

Q ss_pred             HHHHHHh--cCCceEe-ecCcccC
Q 037234           19 WRTHEKN--CGRIWYC-VCGSDFK   39 (81)
Q Consensus        19 l~~h~~~--~~~p~~C-~C~~~f~   39 (81)
                      |..|+++  +++||.| .|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            5566664  5666777 6666664

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.25  E-value=2.2e-06  Score=57.87  Aligned_cols=62  Identities=19%  Similarity=0.326  Sum_probs=44.8

Q ss_pred             CccccCcCCcCCCChhHHHHHHHhcCCceEeecCcccCChhHHHHHHHHhcCCCCCCCCCCccCC
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKNCGRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEED   66 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~~~~p~~C~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~~   66 (81)
                      +.+.|..|++.|. ...|..|+.++.+++.|.|+..+ .+..|..|+++| .+.+++.|..+...
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~CpCg~~~-~R~~L~~H~~th-Cp~Kpi~C~fC~~~  513 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCPCGVVL-EKEQMVQHQAST-CPLRLITCRFCGDM  513 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcCCCccCCCCCCc-chhHHHhhhhcc-CCCCceeCCCCCCc
Confidence            3567888888875 56688888875577777677544 567788888877 78888888776643

>PHA00733 hypothetical protein

Probab=98.23  E-value=6.8e-07  Score=50.01  Aligned_cols=61  Identities=15%  Similarity=0.079  Sum_probs=48.1

Q ss_pred             CccccCcCCcCCCChhHHHHHHH------h-cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEK------N-CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~------~-~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      +++.|..|.+.|.....|..+..      + +.+||.| .|++.|.....|..|++.+   ..+|.|..++.
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h---~~~~~C~~CgK  107 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT---EHSKVCPVCGK  107 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC---CcCccCCCCCC
Confidence            46789999988888777766622      2 4789999 9999999999999999875   34688876654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.23  E-value=1.3e-06  Score=34.64  Aligned_cols=22  Identities=36%  Similarity=0.961  Sum_probs=15.1

Q ss_pred             eEe-ecCcccCChhHHHHHHHHh
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |.| .|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            567 7777777777777776653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00616 hypothetical protein

Probab=98.18  E-value=9.7e-07  Score=40.54  Aligned_cols=30  Identities=17%  Similarity=0.088  Sum_probs=27.1

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ||.|..||+.|..+..|..|++.  +++++.|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            78999999999999999999995  6788876

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.14  E-value=5.5e-07  Score=56.88  Aligned_cols=49  Identities=24%  Similarity=0.409  Sum_probs=40.5

Q ss_pred             CCccccCc--CCcCCCChhHHHHHHHhc---------------------CCceEe-ecCcccCChhHHHHHHH
Q 037234            1 MISSKRKK--CGKPFAVKGDWRTHEKNC---------------------GRIWYC-VCGSDFKHKRSLKDHIK   49 (81)
Q Consensus         1 ~kp~~C~~--C~k~f~~~~~l~~h~~~~---------------------~~p~~C-~C~~~f~~~~~l~~H~~   49 (81)
                      +|||+|++  |.|.|.....|+-|+..|                     .+||+| +|++++.+...|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            48999986  999999998899888631                     279999 99999999988887754

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.11  E-value=8.3e-06  Score=39.08  Aligned_cols=46  Identities=22%  Similarity=0.344  Sum_probs=36.6

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh-c---CCceEe-ecCcccCChhHHHHHHHHh
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN-C---GRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~-~---~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      .|.|+.|++ ......|..|... +   .+.+.| +|...+.  .+|..|+...
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            589999999 5667789999884 2   457899 9988655  4899998876

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.10  E-value=2.4e-06  Score=35.08  Aligned_cols=21  Identities=14%  Similarity=0.331  Sum_probs=18.7

Q ss_pred             HHHHHHHHhcCCCCCCCCCCcc
Q 037234           43 SLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus        43 ~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      +|..|+++| +|++||.|+.++
T Consensus         1 ~l~~H~~~H-~~~k~~~C~~C~   21 (26)
T PF13465_consen    1 NLRRHMRTH-TGEKPYKCPYCG   21 (26)
T ss_dssp             HHHHHHHHH-SSSSSEEESSSS
T ss_pred             CHHHHhhhc-CCCCCCCCCCCc
Confidence            588999999 999999998765

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.98  E-value=1.4e-05  Score=54.11  Aligned_cols=59  Identities=19%  Similarity=0.325  Sum_probs=47.8

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccC----------ChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFK----------HKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~----------~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      +|+.|+ |++.+ ....|..|+.+  ..+++.| .|++.|.          ..+.|..|+...  |.+++.|..+.
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C--G~rt~~C~~Cg  548 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC--GSRTAPCDSCG  548 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc--CCcceEccccC
Confidence            478899 99754 67889999885  4899999 9999985          245799999875  89999987664

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.91  E-value=7e-06  Score=33.73  Aligned_cols=23  Identities=26%  Similarity=0.707  Sum_probs=17.9

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHh
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ||.| .|++.|.....|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            5778 8888888888888887766

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.79  E-value=1.3e-05  Score=31.64  Aligned_cols=22  Identities=32%  Similarity=0.604  Sum_probs=20.3

Q ss_pred             cccCcCCcCCCChhHHHHHHHh
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      |.|..|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            6899999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.78  E-value=3.2e-05  Score=30.42  Aligned_cols=22  Identities=32%  Similarity=1.017  Sum_probs=14.4

Q ss_pred             eEe-ecCcccCChhHHHHHHHHh
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |.| .|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            567 7777777777777777665

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.68  E-value=3e-05  Score=50.75  Aligned_cols=49  Identities=22%  Similarity=0.550  Sum_probs=41.8

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh----------cCC-------------------------ceEe-ecCcccCChhHHHH
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN----------CGR-------------------------IWYC-VCGSDFKHKRSLKD   46 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~----------~~~-------------------------p~~C-~C~~~f~~~~~l~~   46 (81)
                      -|+|+.|+|.|.-..||..|.|=          +..                         .|.| .|++.|.+..-|+.
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrK  374 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRK  374 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHH
Confidence            48999999999999999999871          111                         3789 99999999999999


Q ss_pred             HHHHh
Q 037234           47 HIKAF   51 (81)
Q Consensus        47 H~~~~   51 (81)
                      |+-+|
T Consensus       375 Hqlth  379 (500)
T KOG3993|consen  375 HQLTH  379 (500)
T ss_pred             hHHhh
Confidence            98777

>smart00355 ZnF_C2H2 zinc finger

Probab=97.36  E-value=0.00013  Score=28.90  Aligned_cols=22  Identities=41%  Similarity=0.952  Sum_probs=15.5

Q ss_pred             eEe-ecCcccCChhHHHHHHHHh
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |.| .|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            356 7777777777777777755

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.36  E-value=8e-05  Score=30.44  Aligned_cols=23  Identities=26%  Similarity=0.573  Sum_probs=21.4

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ||.|..|++.|.....|..|++.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~   23 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRS   23 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCT
T ss_pred             CCCCCccCCccCChhHHHHHhHH
Confidence            68999999999999999999975

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.34  E-value=0.00028  Score=33.32  Aligned_cols=30  Identities=23%  Similarity=0.532  Sum_probs=21.8

Q ss_pred             CCceEe-ecCcccCChhHHHHHHHHhcCCCCC
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAA   57 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p   57 (81)
                      ..|-.| .|+..+.+..+|..|+.++ ++.||
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~-H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIR-HFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHH-TTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHH-hcccC
Confidence            578899 9999999999999999988 77776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.32  E-value=0.00018  Score=28.13  Aligned_cols=22  Identities=32%  Similarity=0.582  Sum_probs=18.3

Q ss_pred             cccCcCCcCCCChhHHHHHHHh
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      |.|+.|++.|.....|..|+.+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            6899999999999999999874

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.15  E-value=0.00065  Score=35.59  Aligned_cols=47  Identities=21%  Similarity=0.523  Sum_probs=20.5

Q ss_pred             ccCcCCcCCCChhHHHHHHHh-c------------------------CCceEe-ecCcccCChhHHHHHHHHh
Q 037234            5 KRKKCGKPFAVKGDWRTHEKN-C------------------------GRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         5 ~C~~C~k~f~~~~~l~~h~~~-~------------------------~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      .|..|+..|.....|..|+.. +                        ...+.| .|++.|.+...|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            377888888888888888751 0                        124789 9999999999999999976

>PHA00732 hypothetical protein

Probab=97.14  E-value=0.00044  Score=35.69  Aligned_cols=33  Identities=18%  Similarity=0.371  Sum_probs=26.1

Q ss_pred             ceEe-ecCcccCChhHHHHHHHH-hcCCCCCCCCCCccC
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKA-FGHGHAALGIECFEE   65 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~-~~~~~~p~~~~~~~~   65 (81)
                      ||.| .|++.|.+..+|..|++. | .   ++.|+.++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H-~---~~~C~~CgK   35 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNH-T---LTKCPVCNK   35 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhccc-C---CCccCCCCC
Confidence            6889 999999999999999985 5 4   345655543

>smart00355 ZnF_C2H2 zinc finger

Probab=96.99  E-value=0.00088  Score=26.36  Aligned_cols=22  Identities=27%  Similarity=0.557  Sum_probs=20.0

Q ss_pred             cccCcCCcCCCChhHHHHHHHh
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      |.|..|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            5799999999999999999874

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.83  E-value=0.00082  Score=26.79  Aligned_cols=21  Identities=33%  Similarity=1.099  Sum_probs=14.8

Q ss_pred             eEe-ecCcccCChhHHHHHHHH
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKA   50 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~   50 (81)
                      |.| .|.+.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            567 777777777777777653

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=96.80  E-value=0.00019  Score=47.11  Aligned_cols=48  Identities=15%  Similarity=0.188  Sum_probs=41.8

Q ss_pred             cccCcCCcCCCChhHHHHHHH--hcCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            4 SKRKKCGKPFAVKGDWRTHEK--NCGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~--~~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |.|..|...|.....|.+|.=  |-..-|+| .|+|.|+-..||..|.|.|
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWH  318 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWH  318 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhccc
Confidence            779999988999999999874  33457999 9999999999999999988

>PRK04860 hypothetical protein; Provisional

Probab=96.78  E-value=0.001  Score=38.63  Aligned_cols=23  Identities=17%  Similarity=0.327  Sum_probs=11.8

Q ss_pred             ChhHHHHHHHHhcCCCCCCCCCCc
Q 037234           40 HKRSLKDHIKAFGHGHAALGIECF   63 (81)
Q Consensus        40 ~~~~l~~H~~~~~~~~~p~~~~~~   63 (81)
                      ...++..|.+++ .|+++|.|..+
T Consensus       127 ~~~~~rrH~ri~-~g~~~YrC~~C  149 (160)
T PRK04860        127 HQLTVRRHNRVV-RGEAVYRCRRC  149 (160)
T ss_pred             eeCHHHHHHHHh-cCCccEECCCC
Confidence            444455555555 55555555443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.76  E-value=0.0013  Score=31.13  Aligned_cols=24  Identities=17%  Similarity=0.228  Sum_probs=17.9

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      .|..|+.|+..+.+..+|.+|+.+
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~   46 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEI   46 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHH
T ss_pred             CCCCCCcchhhccchhhHHHHHHH
Confidence            578899999999999999999985

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.14  E-value=0.0028  Score=25.15  Aligned_cols=21  Identities=24%  Similarity=0.412  Sum_probs=19.5

Q ss_pred             cccCcCCcCCCChhHHHHHHH
Q 037234            4 SKRKKCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~   24 (81)
                      |.|..|++.|.....+..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            579999999999999999986

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.01  E-value=0.0067  Score=23.87  Aligned_cols=21  Identities=33%  Similarity=0.667  Sum_probs=11.7

Q ss_pred             eEe-ecCcccCChhHHHHHHHHh
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |+| .|.-... ...|..|++.+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            456 6665555 66666676654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.60  E-value=0.0034  Score=25.58  Aligned_cols=21  Identities=24%  Similarity=0.374  Sum_probs=10.9

Q ss_pred             cccCcCCcCCCChhHHHHHHH
Q 037234            4 SKRKKCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~   24 (81)
                      |.|..|++.|.....+..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            345555555555555555443

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=95.55  E-value=0.0051  Score=38.05  Aligned_cols=40  Identities=20%  Similarity=0.378  Sum_probs=32.2

Q ss_pred             cCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCChhHHHHH
Q 037234            6 RKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHKRSLKDH   47 (81)
Q Consensus         6 C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~~~l~~H   47 (81)
                      |=.|++.|-...-|.+|++  .+.|+| +|-+.+.+--.|..|
T Consensus        13 cwycnrefddekiliqhqk--akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQK--AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhh--hccceeeeehhhhccCCCceee
Confidence            6779999999999999998  478999 998776665555444

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.14  E-value=0.021  Score=24.34  Aligned_cols=21  Identities=33%  Similarity=0.861  Sum_probs=15.3

Q ss_pred             ceEe-ecCcccCChhHHHHHHH
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIK   49 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~   49 (81)
                      +|.| .|...|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5677 78887877777777754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PRK04860 hypothetical protein; Provisional

Probab=95.12  E-value=0.021  Score=33.24  Aligned_cols=35  Identities=23%  Similarity=0.491  Sum_probs=28.8

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCCh
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHK   41 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~   41 (81)
                      +|.|. |++   ....+.+|.++  ++++|.| .|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            68898 987   66778899986  6889999 999887654

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.01  E-value=0.027  Score=22.63  Aligned_cols=20  Identities=30%  Similarity=0.476  Sum_probs=12.7

Q ss_pred             ccCcCCcCCCChhHHHHHHHh
Q 037234            5 KRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         5 ~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      .|+.||+.| ....|..|+.+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            477777777 34456666653

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=93.91  E-value=0.031  Score=35.98  Aligned_cols=24  Identities=29%  Similarity=0.677  Sum_probs=21.1

Q ss_pred             cCCceEe---ecCcccCChhHHHHHHH
Q 037234           26 CGRIWYC---VCGSDFKHKRSLKDHIK   49 (81)
Q Consensus        26 ~~~p~~C---~C~~~f~~~~~l~~H~~   49 (81)
                      +++||+|   .|.+.+.+...|+.|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhh
Confidence            4699999   69999999999999875

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=92.74  E-value=0.084  Score=32.91  Aligned_cols=47  Identities=26%  Similarity=0.465  Sum_probs=37.1

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh-cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN-CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~-~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      -|.|..||.+.. +..+.+|+.. ...-|.| -|++.|.. ..+..|...-
T Consensus         3 ~FtCnvCgEsvK-Kp~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~kCI   51 (276)
T KOG2186|consen    3 FFTCNVCGESVK-KPQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTKCI   51 (276)
T ss_pred             EEehhhhhhhcc-ccchHHHHHhccCCeeEEeeccccccc-chhhhhhhhc
Confidence            478999997644 5668889986 3567899 99999998 6788887765

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=91.96  E-value=0.13  Score=26.68  Aligned_cols=23  Identities=22%  Similarity=0.403  Sum_probs=20.4

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++.|..|++.|.....|..|++.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHcC
Confidence            47899999999999999999995

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=91.30  E-value=0.14  Score=38.39  Aligned_cols=49  Identities=18%  Similarity=0.382  Sum_probs=41.1

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh---------------------------cCCceEe-ecCcccCChhHHHHHHHH
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN---------------------------CGRIWYC-VCGSDFKHKRSLKDHIKA   50 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~---------------------------~~~p~~C-~C~~~f~~~~~l~~H~~~   50 (81)
                      +.++|++|+-.|.....|..|||.                           +.++|.| .|-..++.+.+|..|+..
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            468899999999999999999884                           0257889 999999999999999763

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.44  E-value=0.066  Score=34.22  Aligned_cols=57  Identities=25%  Similarity=0.437  Sum_probs=48.2

Q ss_pred             ccccCcCCcCCCChhHHHHHHH--h--cC--CceEe---ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEK--N--CG--RIWYC---VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~--~--~~--~p~~C---~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      ++.|..|...|.....+..|.+  .  ++  +++.|   .|++.|.+...+..|..+| .+-.++.+
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  354 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLH-TSISPAKE  354 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccc-cCCCcccc
Confidence            5778999999999999999998  5  46  89999   3999999999999999988 67666543

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=86.52  E-value=0.31  Score=25.60  Aligned_cols=29  Identities=31%  Similarity=0.749  Sum_probs=20.2

Q ss_pred             ccccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccC
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFK   39 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~   39 (81)
                      .|.|+.|++.        .+.++....|.| .|+..|.
T Consensus        35 ~~~Cp~C~~~--------~VkR~a~GIW~C~kCg~~fA   64 (89)
T COG1997          35 KHVCPFCGRT--------TVKRIATGIWKCRKCGAKFA   64 (89)
T ss_pred             CCcCCCCCCc--------ceeeeccCeEEcCCCCCeec
Confidence            6889999875        222344557899 9988775

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=86.35  E-value=0.15  Score=29.58  Aligned_cols=40  Identities=23%  Similarity=0.359  Sum_probs=21.9

Q ss_pred             cccCcCCcCCCChh-HHHHHHHh-cCCceEe-ecCcccCChhH
Q 037234            4 SKRKKCGKPFAVKG-DWRTHEKN-CGRIWYC-VCGSDFKHKRS   43 (81)
Q Consensus         4 ~~C~~C~k~f~~~~-~l~~h~~~-~~~p~~C-~C~~~f~~~~~   43 (81)
                      .+|+.||..++... ....-.+. -.+.++| .||++|.....
T Consensus         1 m~cp~c~~~~~~~~~s~~~~~~~~~~~~~~c~~c~~~f~~~e~   43 (154)
T PRK00464          1 MRCPFCGHPDTRVIDSRPAEDGNAIRRRRECLACGKRFTTFER   43 (154)
T ss_pred             CcCCCCCCCCCEeEeccccCCCCceeeeeeccccCCcceEeEe
Confidence            37999997653321 11000010 1234899 99999986533

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=86.05  E-value=0.36  Score=23.32  Aligned_cols=26  Identities=19%  Similarity=0.519  Sum_probs=19.8

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |+..+.| .|+..|.....+..|....
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKa   40 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKA   40 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHH
Confidence            5667788 8888888888888876644

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=85.59  E-value=0.49  Score=25.84  Aligned_cols=30  Identities=23%  Similarity=0.504  Sum_probs=23.0

Q ss_pred             cccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCChh
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHKR   42 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~~   42 (81)
                      ..|+.||+.|--..         ..|..| .||..|.-..
T Consensus        10 R~Cp~CG~kFYDLn---------k~PivCP~CG~~~~~~~   40 (108)
T PF09538_consen   10 RTCPSCGAKFYDLN---------KDPIVCPKCGTEFPPEP   40 (108)
T ss_pred             ccCCCCcchhccCC---------CCCccCCCCCCccCccc
Confidence            57999998776442         468899 9999888773

The function of members of this family is unknown.

>smart00614 ZnF_BED BED zinc finger

Probab=84.00  E-value=0.99  Score=20.89  Aligned_cols=22  Identities=23%  Similarity=0.671  Sum_probs=16.2

Q ss_pred             eEe-ecCcccCCh-----hHHHHHHH-Hh
Q 037234           30 WYC-VCGSDFKHK-----RSLKDHIK-AF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~-----~~l~~H~~-~~   51 (81)
                      -.| .|++.+...     ++|..|++ .|
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~~h   47 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRRKH   47 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHhHC
Confidence            467 888877654     68999988 44

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=83.76  E-value=0.46  Score=20.19  Aligned_cols=23  Identities=30%  Similarity=0.742  Sum_probs=14.6

Q ss_pred             cccCcCCcCCCChhHHHHHHHhcCCceEe-ecCc
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGS   36 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~   36 (81)
                      |.|..||..+...          ..++.| .|+.
T Consensus         2 ~~C~~CGy~y~~~----------~~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGE----------EAPWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCC----------cCCCcCcCCCC
Confidence            6788887654322          257788 8864

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=83.17  E-value=0.54  Score=21.42  Aligned_cols=30  Identities=23%  Similarity=0.474  Sum_probs=19.7

Q ss_pred             CccccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccC
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFK   39 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~   39 (81)
                      ..|.|..||..|.....        .....| .||..+.
T Consensus         2 ~~y~C~~CG~~~~~~~~--------~~~~~Cp~CG~~~~   32 (46)
T PRK00398          2 AEYKCARCGREVELDEY--------GTGVRCPYCGYRIL   32 (46)
T ss_pred             CEEECCCCCCEEEECCC--------CCceECCCCCCeEE
Confidence            56899999987654332        126788 8886543

>PHA00626 hypothetical protein

Probab=82.76  E-value=0.33  Score=23.40  Aligned_cols=34  Identities=21%  Similarity=0.327  Sum_probs=20.1

Q ss_pred             ccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCCh
Q 037234            5 KRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHK   41 (81)
Q Consensus         5 ~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~   41 (81)
                      .|+.||..-..+.....   -....|.| .||..|+..
T Consensus         2 ~CP~CGS~~Ivrcg~cr---~~snrYkCkdCGY~ft~~   36 (59)
T PHA00626          2 SCPKCGSGNIAKEKTMR---GWSDDYVCCDCGYNDSKD   36 (59)
T ss_pred             CCCCCCCceeeeeceec---ccCcceEcCCCCCeechh
Confidence            58888864222221111   11468999 999888754

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=82.69  E-value=1  Score=20.13  Aligned_cols=23  Identities=35%  Similarity=0.597  Sum_probs=13.9

Q ss_pred             CCceEe-ecCcccCC----hhHHHHHHH
Q 037234           27 GRIWYC-VCGSDFKH----KRSLKDHIK   49 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~----~~~l~~H~~   49 (81)
                      ..-..| .|++.+..    .++|..|++
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~   41 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLK   41 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhh
Confidence            345678 88877765    377888884

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=82.10  E-value=1  Score=22.00  Aligned_cols=8  Identities=38%  Similarity=1.161  Sum_probs=3.8

Q ss_pred             CceEe-ecC
Q 037234           28 RIWYC-VCG   35 (81)
Q Consensus        28 ~p~~C-~C~   35 (81)
                      .+|.| .||
T Consensus        49 ~~Y~Cp~CG   57 (61)
T COG2888          49 NPYRCPKCG   57 (61)
T ss_pred             CceECCCcC
Confidence            34555 444

>PF04606 Ogr_Delta: Ogr/Delta-like zinc finger; InterPro: IPR007684 This entry is represented by Bacteriophage P2, Ogr

Probab=81.25  E-value=0.32  Score=22.42  Aligned_cols=37  Identities=16%  Similarity=0.370  Sum_probs=22.3

Q ss_pred             ccCcCCcCCCChhHHHHHHHhcCCceEe---ecCcccCCh
Q 037234            5 KRKKCGKPFAVKGDWRTHEKNCGRIWYC---VCGSDFKHK   41 (81)
Q Consensus         5 ~C~~C~k~f~~~~~l~~h~~~~~~p~~C---~C~~~f~~~   41 (81)
                      .|+.||...........+..+.+.-++|   .||..|...
T Consensus         1 ~CP~Cg~~a~ir~S~~~s~~~~~~Y~qC~N~~Cg~tfv~~   40 (47)
T PF04606_consen    1 RCPHCGSKARIRTSRQLSPLTRELYCQCTNPECGHTFVAN   40 (47)
T ss_pred             CcCCCCCeeEEEEchhhCcceEEEEEEECCCcCCCEEEEE
Confidence            4888887655554433333334556778   599887643

The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This is a viral family of phage zinc-binding transcriptional activators, which also contains cryptic members in some bacterial genomes []. The P4 phage delta protein contains two such domains attached covalently, while the P2 phage Ogr proteins possess one domain but function as dimers. All the members of this family have the following consensus sequence: C-X(2)-C-X(3)-A-(X)2-R-X(15)-C-X(4)-C-X(3)-F [].; GO: 0006355 regulation of transcription, DNA-dependent

>PF15269 zf-C2H2_7: Zinc-finger

Probab=80.84  E-value=1.8  Score=19.98  Aligned_cols=22  Identities=27%  Similarity=0.484  Sum_probs=17.6

Q ss_pred             eEe-ecCcccCChhHHHHHHHHh
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |+| +|.....-++.|-.|++..
T Consensus        21 ykcfqcpftc~~kshl~nhmky~   43 (54)
T PF15269_consen   21 YKCFQCPFTCNEKSHLFNHMKYS   43 (54)
T ss_pred             ceeecCCcccchHHHHHHHHHHH
Confidence            578 9988888888888888754

>PRK09678 DNA-binding transcriptional regulator; Provisional

Probab=80.81  E-value=0.45  Score=24.14  Aligned_cols=41  Identities=15%  Similarity=0.242  Sum_probs=24.9

Q ss_pred             cccCcCCcCCCChhHHHHHHHhcCCceEe---ecCcccCChhHH
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKNCGRIWYC---VCGSDFKHKRSL   44 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~~~~p~~C---~C~~~f~~~~~l   44 (81)
                      +.|+.||........-.....+.++-++|   .||.+|.....+
T Consensus         2 m~CP~Cg~~a~irtSr~~s~~~~~~Y~qC~N~eCg~tF~t~es~   45 (72)
T PRK09678          2 FHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESV   45 (72)
T ss_pred             ccCCCCCCccEEEEChhcChhhheeeeecCCCCCCCEEEEEEEE
Confidence            46999987653333222222223566788   799999876554

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=80.67  E-value=0.98  Score=19.68  Aligned_cols=32  Identities=31%  Similarity=0.548  Sum_probs=21.7

Q ss_pred             ccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccC
Q 037234            5 KRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFK   39 (81)
Q Consensus         5 ~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~   39 (81)
                      .|+.|+..|.....-.   ..+....+| .|+..|.
T Consensus         4 ~CP~C~~~f~v~~~~l---~~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    4 TCPNCQTRFRVPDDKL---PAGGRKVRCPKCGHVFR   36 (37)
T ss_pred             ECCCCCceEEcCHHHc---ccCCcEEECCCCCcEee
Confidence            5889998887665421   123457789 9988764

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=80.65  E-value=1.1  Score=25.36  Aligned_cols=24  Identities=38%  Similarity=0.808  Sum_probs=14.3

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      .-..| .||+.|...   ..|++.| +|-
T Consensus        71 d~i~clecGk~~k~L---krHL~~~-~gl   95 (132)
T PF05443_consen   71 DYIICLECGKKFKTL---KRHLRTH-HGL   95 (132)
T ss_dssp             S-EE-TBT--EESBH---HHHHHHT-T-S
T ss_pred             CeeEEccCCcccchH---HHHHHHc-cCC
Confidence            34579 999988765   8899988 553

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	81
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.84
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.74
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.73
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.73
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.71
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.69
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.67
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.63
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.62
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.62
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.61
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.61
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.61
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.61
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.6
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.6
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.59
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.59
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.59
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.58
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.58
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.57
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.56
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.56
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.55
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.55
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.54
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.54
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.54
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.53
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.52
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.52
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.51
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.51
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.5
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.49
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.49
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.49
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.48
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.47
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.46
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.45
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.45
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.44
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.44
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.43
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.41
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.4
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.38
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.37
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.37
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.36
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.34
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.34
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.33
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.33
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.32
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.31
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.31
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.28
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.25
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.24
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.24
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.21
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.17
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.17
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.17
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.16
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.16
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.15
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.15
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.15
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.14
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.13
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.13
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.1
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.05
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.03
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.01
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.99
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.97
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.97
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.96
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.95
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.94
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.93
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.92
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.92
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.9
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.9
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.89
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.89
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.89
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.89
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.88
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.88
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.85
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.83
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.83
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.83
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.82
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.81
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.8
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.79
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.79
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.77
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.76
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.76
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.75
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.75
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.75
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.75
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.74
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.74
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.73
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.72
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.72
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.71
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.71
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.71
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.71
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.7
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.7
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.7
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.69
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.69
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.69
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.68
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.68
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.68
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.67
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.67
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.67
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.67
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.67
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.66
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.66
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.65
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.64
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.63
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.63
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.62
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.62
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.61
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.02
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.59
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.59
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.58
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.57
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.55
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.55
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.53
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.48
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.48
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.47
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.44
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.44
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.42
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.41
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.78
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.39
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.39
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.37
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.34
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.32
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.27
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.25
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.25
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.25
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.24
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.23
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.22
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.22
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.51
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.18
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.16
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.14
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.13
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.4
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.11
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.04
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.3
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.01
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.0
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.99
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.93
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.89
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.8
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.68
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.62
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.16
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.79
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.78
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.37
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.46
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.04
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	94.24
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	93.62
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	91.5
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.44
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	90.39
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.24
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	88.25
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	84.39
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	83.19
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	82.44

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.84  E-value=2.6e-21  Score=94.75  Aligned_cols=55  Identities=20%  Similarity=0.375  Sum_probs=51.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      ||||.|..||+.|.....|..|+++  +++||.| .|++.|...++|..|+++| +|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~H-tgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH-QNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGG-SCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCcc-CCCC
Confidence            7999999999999999999999996  7999999 9999999999999999999 8874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=2.3e-18  Score=92.07  Aligned_cols=73  Identities=15%  Similarity=0.194  Sum_probs=62.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh-c-----CCceEe-ecCcccCChhHHHHH-HHHhcCCCCCCCCCCccCCCCcccc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN-C-----GRIWYC-VCGSDFKHKRSLKDH-IKAFGHGHAALGIECFEEDDEPASE   72 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~-~-----~~p~~C-~C~~~f~~~~~l~~H-~~~~~~~~~p~~~~~~~~~~~~~~~   72 (81)
                      ++||.|..|++.|.....|..|++. +     ++||.| .|++.|...+.|..| +++| +|++||.|.....+...+.+
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~H-tgekpy~C~~~~~~~~~~~e   94 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH-PGEENFKLTMVKRNNQTIFE   94 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTS-TTCCCEEEEECCCSSCCCEE
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhc-CCCCCeeCCcccCCCccchh
Confidence            5799999999999999999999973 4     689999 999999999999999 8999 99999999775555554444


Q ss_pred             cc
Q 037234           73 IE   74 (81)
Q Consensus        73 ~~   74 (81)
                      .+
T Consensus        95 q~   96 (102)
T 2ghf_A           95 QT   96 (102)
T ss_dssp             EE
T ss_pred             hh
Confidence            43

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.3e-18  Score=86.14  Aligned_cols=59  Identities=24%  Similarity=0.468  Sum_probs=55.5

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      +++|.|..|++.|.....|..|+++  +.+||.| .|++.|.....|..|+++| ++++||.|
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H-~~~~p~~C   77 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH-TGSGPSSG   77 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGS-CCCCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHh-CCCCCCCC
Confidence            4789999999999999999999996  5789999 9999999999999999999 99999976

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.73  E-value=1e-17  Score=84.17  Aligned_cols=57  Identities=25%  Similarity=0.551  Sum_probs=53.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAAL   58 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~   58 (81)
                      +++|.|..|++.|.....|..|+++  ++++|.| .|++.|.....|..|+++| ++++||
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~kp~   74 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH-SGEKPY   74 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHH-CCSCCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhc-CCCCCC
Confidence            4789999999999999999999996  5789999 9999999999999999999 899987

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.71  E-value=5.1e-18  Score=94.36  Aligned_cols=62  Identities=13%  Similarity=0.163  Sum_probs=41.8

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      ++|.|..|++.|.....|..|+++  +++||.| .|++.|.....|..|+++| +|++||.|+.++
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~C~   85 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHH-TGERRYQCLACG   85 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHH-HTCCCEEESSSC
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhcccc-CCCccccCCCCC
Confidence            466677777777777777777664  4666777 7777777777777777666 666666665554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=3.7e-17  Score=86.33  Aligned_cols=63  Identities=21%  Similarity=0.184  Sum_probs=56.3

Q ss_pred             CCccccCcCCcCCC-ChhHHHHHHHh--c-CCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            1 MISSKRKKCGKPFA-VKGDWRTHEKN--C-GRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         1 ~kp~~C~~C~k~f~-~~~~l~~h~~~--~-~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      +++|.|..|++.|. ....|..|+++  + +++|.| .|++.|.....|..|+++| ++++|+..+..+
T Consensus        22 ~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h-~~~kp~~~~~~~   89 (98)
T 2gqj_A           22 RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAE-HSAKPSDAEASE   89 (98)
T ss_dssp             TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHH-SCSCSSCCCCCC
T ss_pred             CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHH-cCCCCCCCCCCc
Confidence            47899999999999 99999999996  4 789999 9999999999999999999 899998654433

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=9.2e-17  Score=79.84  Aligned_cols=59  Identities=29%  Similarity=0.460  Sum_probs=54.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      ++||.|..|++.|.....|..|+++  ++++|.| .|++.|.....|..|+++| ++++|.+.
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h-~~~~p~p~   68 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF-HGDMSGPS   68 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHH-HSSSCCSS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHH-hCCCCCCC
Confidence            4799999999999999999999997  5789999 9999999999999999999 89988754

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.63  E-value=1e-15  Score=85.06  Aligned_cols=58  Identities=26%  Similarity=0.466  Sum_probs=53.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALG   59 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~   59 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|++.|.....|..|++++ ++++|+.
T Consensus        48 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~h-h~~~p~~  108 (133)
T 2lt7_A           48 EKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSV-HSQDPSG  108 (133)
T ss_dssp             CSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHH-TCCCTTS
T ss_pred             CCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHh-cCCCCCC
Confidence            4799999999999999999999996  6899999 9999999999999999999 7776653

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=1.1e-15  Score=77.16  Aligned_cols=63  Identities=24%  Similarity=0.415  Sum_probs=57.4

Q ss_pred             CCccccCc--CCcCCCChhHHHHHHH-h--cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            1 MISSKRKK--CGKPFAVKGDWRTHEK-N--CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         1 ~kp~~C~~--C~k~f~~~~~l~~h~~-~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      +++|.|..  |++.|.....|..|++ +  ++++|.| .  |++.|.....|..|+++| ++++||.|+.+.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C~   75 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH-SDTRDYICEFSG   75 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHH-HTSCCCSCCSSS
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHh-CCCCCeeCCCCC
Confidence            46888886  9999999999999998 4  5889999 8  999999999999999999 899999997764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.62  E-value=1e-15  Score=73.01  Aligned_cols=51  Identities=24%  Similarity=0.357  Sum_probs=46.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|++.|.....|..|+++|
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHh
Confidence            4799999999999999999999996  6899999 9999999999999999998

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.61  E-value=1.3e-15  Score=72.67  Aligned_cols=53  Identities=23%  Similarity=0.358  Sum_probs=49.3

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      ||.|..|++.|.....|..|+++  +++||.| .|++.|.....|..|+++| ++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK-AHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSS-SSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHh-cccC
Confidence            79999999999999999999997  5789999 9999999999999999999 6654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.61  E-value=1.5e-15  Score=79.22  Aligned_cols=64  Identities=20%  Similarity=0.325  Sum_probs=58.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++||.|..|++.|.....|..|+++  +.++|.| .|++.|.....|..|+++| .++++|.|..+..
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   72 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH-SDERPFKCQICPY   72 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHS-CCCCCEECSSSSC
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHh-CCCCCccCCCCCC
Confidence            4789999999999999999999997  4789999 9999999999999999999 8999999877653

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=1.6e-15  Score=80.01  Aligned_cols=57  Identities=16%  Similarity=0.253  Sum_probs=50.7

Q ss_pred             CCccccCcCCcCC-CChhHHHHHHHh-cCCceEe-ecCcccCChhHHHHH-HHHhcCCCCCC
Q 037234            1 MISSKRKKCGKPF-AVKGDWRTHEKN-CGRIWYC-VCGSDFKHKRSLKDH-IKAFGHGHAAL   58 (81)
Q Consensus         1 ~kp~~C~~C~k~f-~~~~~l~~h~~~-~~~p~~C-~C~~~f~~~~~l~~H-~~~~~~~~~p~   58 (81)
                      ++||.|..|++.| .....|..|+++ +++||.| .|++.|.....|..| +++| +++..|
T Consensus        32 ~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H-~~~p~~   92 (96)
T 2ctd_A           32 KGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANH-NSLPSG   92 (96)
T ss_dssp             TSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHT-CCCSSC
T ss_pred             CCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhc-CCCCCC
Confidence            4689999999999 999999999997 6889999 999999999999999 8888 654333

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=1.2e-15  Score=76.13  Aligned_cols=56  Identities=20%  Similarity=0.398  Sum_probs=51.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAA   57 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p   57 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|++.|.....|..|+++| +++.+
T Consensus        12 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H-~~~~~   70 (72)
T 1x6e_A           12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH-TSGPS   70 (72)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHH-HSSSS
T ss_pred             CCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhc-CCCCC
Confidence            4799999999999999999999996  5889999 9999999999999999999 66543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=3.7e-15  Score=76.21  Aligned_cols=63  Identities=21%  Similarity=0.305  Sum_probs=56.6

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cC----CceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CG----RIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~----~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      ++||.|..|++.|.....|..|+++  ..    ++|.| .|++.|.....|..|+++| ++++++.|....
T Consensus        13 ~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h-~~~~~~~~~~~~   82 (86)
T 1x6h_A           13 EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC-AGPDGVEGENSG   82 (86)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHC-CCCCSCCCCCCC
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHc-cCCCCcccCCCC
Confidence            4789999999999999999999985  22    78999 9999999999999999999 899999886554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.60  E-value=2.3e-15  Score=79.81  Aligned_cols=63  Identities=21%  Similarity=0.368  Sum_probs=51.5

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++|.|..|++.|.....|..|+++  +.++|.| .|++.|.....|..|+++| .++++|.|..+..
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   81 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH-SKEKPFKCQECGK   81 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGS-CCCCTTSCSSSCC
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHh-CCCCCeECCCcCC
Confidence            578888888888888888888886  4678888 8888888888888888888 7888888876653

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=1.6e-15  Score=78.66  Aligned_cols=53  Identities=25%  Similarity=0.473  Sum_probs=48.2

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHH-HhcCCC
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIK-AFGHGH   55 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~-~~~~~~   55 (81)
                      ++|.|..|++.|.....|..|+++  +++||.| .|++.|....+|..|++ +| .++
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H-~~E   83 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH-PSE   83 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC-TTC
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC-cCC
Confidence            579999999999999999999996  6899999 99999999999999975 55 555

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=3.9e-15  Score=77.44  Aligned_cols=64  Identities=22%  Similarity=0.387  Sum_probs=58.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCC--CCCCCCCccC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGH--AALGIECFEE   65 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~--~p~~~~~~~~   65 (81)
                      +++|.|..|++.|.....|..|+++  +.++|.| .|++.|.....|..|+++| .++  ++|.|..+..
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~~~C~~C~~   73 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH-DGSVGKPYICQSCGK   73 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHH-CCCCCSSBCCSSSCC
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHh-cCCCCCceECCCccc
Confidence            4789999999999999999999997  4789999 9999999999999999999 776  8999987764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.59  E-value=1.9e-15  Score=76.57  Aligned_cols=62  Identities=27%  Similarity=0.412  Sum_probs=56.8

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ||.|..|++.|.....|..|+++  +.++|.| .|++.|.....|..|+++| .++++|.|..+..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   65 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH-TGEKPHKCQVCGK   65 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHH-HTCCCEECTTTSC
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHh-cCCCCCcCCCcch
Confidence            68999999999999999999996  5889999 9999999999999999999 8999999877653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.58  E-value=2.2e-15  Score=77.67  Aligned_cols=64  Identities=17%  Similarity=0.402  Sum_probs=57.3

Q ss_pred             CCccccC--cCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            1 MISSKRK--KCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         1 ~kp~~C~--~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++||.|.  .|++.|.....|..|+++  +.++|.| .|++.|.....|..|+++| ++++||.|..+..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   70 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH-TGEKPFACDICGR   70 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH-HCCCCEECTTTCC
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHc-CCCCCccCCCCCc
Confidence            4799998  699999999999999986  5789999 9999999999999999999 8999999877653

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=9e-15  Score=73.83  Aligned_cols=59  Identities=17%  Similarity=0.242  Sum_probs=52.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--c---CCceEe-ecCcccCChhHHHHHHHHhcCCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--C---GRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALG   59 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~---~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~   59 (81)
                      ++||.|..|++.|.....|..|+++  +   +++|.| .|++.|.....|..|++.++.+.++..
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            5799999999999999999999986  3   789999 999999999999999965547777664

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.57  E-value=4.5e-15  Score=78.65  Aligned_cols=59  Identities=20%  Similarity=0.297  Sum_probs=54.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      +++|.|..|++.|.....|..|+++  ++++|.| .|++.|.....|..|+++| .+++||..
T Consensus        43 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H-~~~~~~~~  104 (106)
T 2ee8_A           43 ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH-MQTSSPTA  104 (106)
T ss_dssp             SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHT-TSCCCCCC
T ss_pred             CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHh-CCCCCCcC
Confidence            3689999999999999999999997  5789999 9999999999999999999 89999854

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.6e-15  Score=80.77  Aligned_cols=58  Identities=17%  Similarity=0.159  Sum_probs=37.0

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh-cCCceEe-ecCcccCChhHHHHHHH-HhcCCCCCCCCC
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN-CGRIWYC-VCGSDFKHKRSLKDHIK-AFGHGHAALGIE   61 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~-~~~p~~C-~C~~~f~~~~~l~~H~~-~~~~~~~p~~~~   61 (81)
                      +|.|..|++.|.....|..|+.. +++||.| .|++.|.....|..|++ +| .++++|++.
T Consensus        42 ~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H-~~~~~~~~~  102 (107)
T 1wjp_A           42 AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH-NQNNMAPTS  102 (107)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHHHHHHHHHTS-CCCCCCCCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHHHHHHHHHHHc-CCCCCCCCC
Confidence            56666666666666666666642 3566677 77777777777777765 55 666666553

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=3.5e-15  Score=79.60  Aligned_cols=62  Identities=29%  Similarity=0.417  Sum_probs=55.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      +++|.| .|++.|.....|..|+++  +.++|.| .|++.|.....|..|+++| .++++|.|..+.
T Consensus         8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~   72 (110)
T 2csh_A            8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH-TGIKPYECNICA   72 (110)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT-CCCCCEECSSSC
T ss_pred             CCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHc-CCCCCeeCCCCc
Confidence            478999 899999999999999986  4789999 9999999999999999999 899999887665

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=6.7e-15  Score=70.87  Aligned_cols=53  Identities=23%  Similarity=0.448  Sum_probs=48.0

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHH-HHhcCCC
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHI-KAFGHGH   55 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~-~~~~~~~   55 (81)
                      +||.|..|++.|.....|..|+++  +++||.| .|++.|.....|..|+ ++| .++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H-~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH-SGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS-CCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc-CCc
Confidence            689999999999999999999996  5789999 9999999999999997 566 554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.55  E-value=8.4e-15  Score=76.24  Aligned_cols=58  Identities=28%  Similarity=0.391  Sum_probs=52.5

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh-c--CCc--------eEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN-C--GRI--------WYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~-~--~~p--------~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      .|.|..|++.|.....|..|+++ +  .++        |.| .|++.|.....|..|+++| ++++||.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH-TGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHH-HTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhc-CCCCCCCCC
Confidence            36699999999999999999986 3  455        899 9999999999999999999 899999985

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.1e-14  Score=71.28  Aligned_cols=53  Identities=19%  Similarity=0.451  Sum_probs=48.5

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh----cCCceEe-ecCcccCChhHHHHHHHHhcCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN----CGRIWYC-VCGSDFKHKRSLKDHIKAFGHG   54 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~----~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~   54 (81)
                      ++||.|..|++.|.....|..|+++    +++||.| .|++.|.....|..|++++ ++
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~-H~   65 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII-HK   65 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHH-TC
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHH-cC
Confidence            4799999999999999999999985    3689999 9999999999999999988 54

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.54  E-value=2e-14  Score=77.67  Aligned_cols=62  Identities=23%  Similarity=0.454  Sum_probs=51.0

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh-----cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN-----CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~-----~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      +||.|..|++.|.....|..|+..     +.++|.| .|++.|.....|..|+++| ++++||.|..+.
T Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~  101 (124)
T 2dlq_A           34 KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSH-TGEMPYKCSSCS  101 (124)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHH-SSSCSEECSSSC
T ss_pred             CCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHc-CCCCCccCCCcc
Confidence            578888888888888888888873     4678888 8888888888888888888 788888887665

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.9e-14  Score=72.52  Aligned_cols=58  Identities=16%  Similarity=0.196  Sum_probs=50.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHH-hc---CCceEe-ecCcccCChhHHHHHHHHhcCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEK-NC---GRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAAL   58 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~-~~---~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~   58 (81)
                      ++||.|..|++.|.....|..|++ .+   .++|.| .|++.|.....|..|+++++..+.|.
T Consensus        13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A           13 EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            479999999999999999999997 42   379999 99999999999999999874556664

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.53  E-value=9.3e-16  Score=79.18  Aligned_cols=60  Identities=20%  Similarity=0.339  Sum_probs=53.6

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|++.|.....|..|++++ ++ .+|.|+.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h-~~-~~~~c~~   63 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HI-LPILEDK   63 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHH-TH-HHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHh-CC-CcchHHH
Confidence            6899999999999999999999996  6889999 9999999999999999999 54 5665543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.52  E-value=2.7e-14  Score=75.95  Aligned_cols=62  Identities=15%  Similarity=0.141  Sum_probs=57.4

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      +++|.|..|++.|.....|..|++++.++|.| .|++.|.....|..|++ | .+++||.|+.+.
T Consensus        14 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H-~~~~~~~C~~C~   76 (107)
T 1wjp_A           14 KEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-K-CEYKKLTCLECM   76 (107)
T ss_dssp             CCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-H-CSTGGGEEGGGT
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-c-CCCCCccCcccc
Confidence            47899999999999999999999987789999 99999999999999996 8 899999998765

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.52  E-value=1.4e-14  Score=74.54  Aligned_cols=55  Identities=20%  Similarity=0.390  Sum_probs=49.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +++|.|..|++.|.....|..|+++  +.++|.| .|++.|.....|..|+++| ++++
T Consensus        32 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~k   89 (90)
T 1a1h_A           32 QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH-LRQK   89 (90)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGG-GC--
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHh-cccC
Confidence            3689999999999999999999996  6889999 9999999999999999999 7775

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.51  E-value=1.7e-14  Score=83.33  Aligned_cols=62  Identities=21%  Similarity=0.460  Sum_probs=44.5

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      ++|.|..|++.|.....|..|+++  ++++|.| .|++.|.....|..|+++| ++++||.|+.++
T Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H-~~~~~~~C~~C~  168 (190)
T 2i13_A          104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH-TGEKPYKCPECG  168 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH-HCCCCEECTTTC
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhc-CCCCCeECCCCC
Confidence            467777777777777777777764  4667777 7777777777777777777 677777776554

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.51  E-value=2.2e-14  Score=77.12  Aligned_cols=58  Identities=17%  Similarity=0.454  Sum_probs=37.3

Q ss_pred             CccccC--cCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234            2 ISSKRK--KCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus         2 kp~~C~--~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      ++|.|.  .|++.|.....|..|+++  +.++|.| .|++.|.....|..|+++| ++++||.|
T Consensus        35 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C   97 (119)
T 2jp9_A           35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH-TGEKPFSC   97 (119)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH-HTCCCEEC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHh-cCCCCeeC
Confidence            456666  566666666666666664  4566666 6666666666666666666 56666666

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.50  E-value=1.1e-14  Score=84.04  Aligned_cols=57  Identities=25%  Similarity=0.548  Sum_probs=48.5

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAAL   58 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~   58 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|++.|.....|..|+++| +|++||
T Consensus       131 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H-~~~k~~  190 (190)
T 2i13_A          131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH-TGKKTS  190 (190)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC-------
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhc-CCCCCC
Confidence            4689999999999999999999996  6899999 9999999999999999999 899986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.49  E-value=1.1e-14  Score=81.65  Aligned_cols=58  Identities=24%  Similarity=0.395  Sum_probs=48.9

Q ss_pred             cccCcCCcCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      |.|..|++.|.....|..|+++  +.++|.| .  |++.|.....|..|+++| ++++||.|..
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h-~~~~~~~C~~  125 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH-TGEKPFKCEF  125 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTT-CSSCSBCCSS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhh-CCCCCccCCC
Confidence            7788888888888888888885  5788888 7  888888888888888888 7888888863

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.49  E-value=2.3e-14  Score=78.38  Aligned_cols=54  Identities=22%  Similarity=0.342  Sum_probs=50.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      ++||.|..|++.|.....|..|++++++||.| .|++.|.....|..|+++| +|.
T Consensus        72 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h-~~~  126 (129)
T 2wbt_A           72 ISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKK-HNI  126 (129)
T ss_dssp             HCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHT-TCC
T ss_pred             CCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHH-CCc
Confidence            37899999999999999999999988889999 9999999999999999999 664

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.8e-14  Score=70.80  Aligned_cols=55  Identities=20%  Similarity=0.259  Sum_probs=50.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh-cCCceEe--ecCcccCChhHHHHHHHHhcCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN-CGRIWYC--VCGSDFKHKRSLKDHIKAFGHGHAA   57 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~-~~~p~~C--~C~~~f~~~~~l~~H~~~~~~~~~p   57 (81)
                      ++||.|..|++.|. ...|..|+++ +++||.|  .|++.|..++.|..|+++| ...+|
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~h-c~~~~   65 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDS-CNTAL   65 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTT-SSSCC
T ss_pred             CCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhh-cccCc
Confidence            47899999999999 9999999986 7899999  6999999999999999998 66655

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.48  E-value=5.8e-14  Score=71.01  Aligned_cols=53  Identities=28%  Similarity=0.491  Sum_probs=48.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHG   54 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~   54 (81)
                      +++|.|..|++.|.....|..|+++  ++++|.| .|++.|.....|..|+++| +|
T Consensus        27 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H-~g   82 (82)
T 2kmk_A           27 TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH-TG   82 (82)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH-C-
T ss_pred             CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh-CC
Confidence            3689999999999999999999996  6899999 9999999999999999998 54

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.47  E-value=6.3e-14  Score=72.92  Aligned_cols=57  Identities=19%  Similarity=0.328  Sum_probs=51.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAAL   58 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~   58 (81)
                      +++|.|..|++.|.....|..|+++  ++++|.| .|++.|.....|..|+++| +++++.
T Consensus        34 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~p   93 (96)
T 2dmd_A           34 VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSH-TGDSGP   93 (96)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTC-CSCCCC
T ss_pred             CCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHh-cCCCCC
Confidence            3689999999999999999999997  5789999 9999999999999999999 777653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.46  E-value=7.8e-14  Score=75.57  Aligned_cols=59  Identities=20%  Similarity=0.439  Sum_probs=45.1

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      ++|.|..|++.|.....|..|+++  +.++|.| .  |++.|.....|..|+++| .++++|.|.
T Consensus        33 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~   96 (124)
T 1ubd_C           33 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH-TGDRPYVCP   96 (124)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHH-HCCCCCCCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHh-CCCCceECC
Confidence            567788888888887778887775  4677888 6  888888888888888877 777787773

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.45  E-value=2.7e-13  Score=70.86  Aligned_cols=63  Identities=14%  Similarity=0.293  Sum_probs=57.1

Q ss_pred             CccccCc--CCcCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            2 ISSKRKK--CGKPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         2 kp~~C~~--C~k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++|.|..  |++.|.....|..|+++  +.++|.| .  |++.|.....|..|+++| ++++||.|..+..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   83 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH-TGAKPFQCGVCNR   83 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHH-TSCCSCBCSSSCC
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHh-CCCCCeECCCCcC
Confidence            5789996  99999999999999996  5789999 5  999999999999999999 8999999987654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.45  E-value=2.1e-13  Score=73.23  Aligned_cols=64  Identities=16%  Similarity=0.313  Sum_probs=58.2

Q ss_pred             CCccccCc--CCcCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            1 MISSKRKK--CGKPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         1 ~kp~~C~~--C~k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      +++|.|..  |++.|.....|..|+++  +.++|.| .  |++.|.....|..|+++| .++++|.|+.+..
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   74 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH-TGVKPFQCKTCQR   74 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHH-HCCCCEECTTTCC
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHc-CCCCCccCCccCc
Confidence            47899997  99999999999999996  5789999 5  999999999999999999 8999999987653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.44  E-value=1.4e-13  Score=70.67  Aligned_cols=63  Identities=19%  Similarity=0.462  Sum_probs=57.2

Q ss_pred             CccccCc--CCcCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            2 ISSKRKK--CGKPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         2 kp~~C~~--C~k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++|.|..  |++.|.....|..|+++  +.++|.| .  |++.|.....|..|+++| ++++||.|..+..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   73 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH-TGHRPFQCQKCDR   73 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHH-HCCCCEECSSSSC
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHc-CCCCCccCCCCCc
Confidence            5789999  99999999999999996  5789999 6  999999999999999999 8999999977653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=9.3e-14  Score=69.18  Aligned_cols=51  Identities=20%  Similarity=0.458  Sum_probs=47.2

Q ss_pred             CCccccC--cCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            1 MISSKRK--KCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         1 ~kp~~C~--~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +++|.|.  .|++.|.....|..|+++  +.++|.| .|++.|.....|..|+++|
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            4689997  699999999999999996  6899999 9999999999999999887

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.43  E-value=1.1e-13  Score=75.03  Aligned_cols=61  Identities=23%  Similarity=0.353  Sum_probs=55.3

Q ss_pred             CCccccC--cCCcCCCChhHHHHHHHh-cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234            1 MISSKRK--KCGKPFAVKGDWRTHEKN-CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus         1 ~kp~~C~--~C~k~f~~~~~l~~h~~~-~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++|.|.  .|++.|.....|..|+++ +.++|.| .|++.|.....|..|+++| .++++|.|..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~   67 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVH-TGEKPFQCTF   67 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGT-SCCCCEECCS
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHc-CCCCCeeCCC
Confidence            3689999  899999999999999997 5789999 9999999999999999999 8999998863

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.41  E-value=4.6e-13  Score=72.27  Aligned_cols=65  Identities=18%  Similarity=0.314  Sum_probs=57.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHh--cCCCCCCCCCCccC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAF--GHGHAALGIECFEE   65 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~--~~~~~p~~~~~~~~   65 (81)
                      +++|.|..|++.|.....|..|+++  ++++|.| .|++.|.....|..|++.+  ..++++|.|+.+..
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~   74 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQE   74 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCC
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCC
Confidence            4689999999999999999999996  5789999 9999999999999999963  26888999877653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.40  E-value=4.2e-13  Score=75.17  Aligned_cols=59  Identities=19%  Similarity=0.352  Sum_probs=35.5

Q ss_pred             CccccCc--CCcCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234            2 ISSKRKK--CGKPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus         2 kp~~C~~--C~k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      ++|.|..  |++.|.....|..|+++  ++++|.| .  |++.|.....|..|+++| ++++||.|+
T Consensus        89 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H-~~~k~~~c~  154 (155)
T 2rpc_A           89 KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH-TSDKSGPSS  154 (155)
T ss_dssp             CSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTT-TSCCCSCSC
T ss_pred             CcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHh-cCCCCCCCC
Confidence            4556655  66666666666666654  3556666 5  666666666666666666 566666553

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.38  E-value=5.6e-13  Score=67.66  Aligned_cols=56  Identities=23%  Similarity=0.380  Sum_probs=50.9

Q ss_pred             cccc--CcCCcCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234            3 SSKR--KKCGKPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus         3 p~~C--~~C~k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      ||.|  ..|++.|.....|..|+++  +++||.| .  |++.|.....|..|+++| ++   |.|..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~---~~C~~   63 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH-AG---YPCKK   63 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHH-HS---EECCS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHh-CC---CCCCC
Confidence            6899  8999999999999999996  6899999 9  999999999999999999 66   66654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.37  E-value=6.4e-13  Score=74.26  Aligned_cols=60  Identities=15%  Similarity=0.315  Sum_probs=41.3

Q ss_pred             CccccCc--CCcCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHH-HHhcCCCCCCCCCC
Q 037234            2 ISSKRKK--CGKPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHI-KAFGHGHAALGIEC   62 (81)
Q Consensus         2 kp~~C~~--C~k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~-~~~~~~~~p~~~~~   62 (81)
                      +||.|..  |++.|.....|..|+++  ++++|.| .  |++.|.....|..|+ ++| .+++||.|..
T Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H-~~~~~~~C~~  133 (155)
T 2gli_A           66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH-SNEKPYVCKL  133 (155)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTT-CSCCCEECCS
T ss_pred             CCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhc-CCCCCeeCCC
Confidence            4667763  77777777777777765  4567777 6  777777777777776 566 6777776654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=4e-14  Score=75.98  Aligned_cols=64  Identities=13%  Similarity=0.057  Sum_probs=52.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--c--CCce-Ee-ecCccc--CChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--C--GRIW-YC-VCGSDF--KHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~--~~p~-~C-~C~~~f--~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++||.|..|++.|.....|..|+++  .  .+++ .| .|++.|  .....|..|+++| ++++||.|+.+..
T Consensus        17 ~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H-~~~~~~~C~~C~k   88 (115)
T 2dmi_A           17 ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE-DAQKVLKCMYCGH   88 (115)
T ss_dssp             CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSC-CCCSSCBCSSSCC
T ss_pred             CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhcc-CCCcceECCCCCC
Confidence            4689999999999999999999986  3  3444 48 999888  8888899999888 8899998877653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=1.1e-12  Score=65.42  Aligned_cols=45  Identities=20%  Similarity=0.254  Sum_probs=38.7

Q ss_pred             hcCCceEe-e--cCcccCChhHHHHHH-HHhcCCCCCCCCCCccCCCCcc
Q 037234           25 NCGRIWYC-V--CGSDFKHKRSLKDHI-KAFGHGHAALGIECFEEDDEPA   70 (81)
Q Consensus        25 ~~~~p~~C-~--C~~~f~~~~~l~~H~-~~~~~~~~p~~~~~~~~~~~~~   70 (81)
                      ++++||.| .  |+++|...++|..|+ ++| ++++||.|..-+++.+..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriH-TgEKP~~~~~~~~~~~~~   71 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVH-KSDLPAFSAEVEEESGPS   71 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHS-SSCCCCCCCSCCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhC-CCCCCccccccccccccC
Confidence            37899999 7  999999999999997 688 999999987776666543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.5e-12  Score=67.55  Aligned_cols=54  Identities=26%  Similarity=0.482  Sum_probs=47.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cC--CceEe-ecCcccCChhHHHHHHH-HhcCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CG--RIWYC-VCGSDFKHKRSLKDHIK-AFGHGH   55 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~--~p~~C-~C~~~f~~~~~l~~H~~-~~~~~~   55 (81)
                      +++|.|..|++.|.....|..|+++  +.  ++|.| .|++.|.....|..|++ +| .++
T Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H-~~~   92 (95)
T 2yt9_A           33 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH-SGP   92 (95)
T ss_dssp             SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTS-CCC
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhc-CCC
Confidence            3689999999999999999999996  34  89999 99999999999999986 56 543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.34  E-value=8.2e-13  Score=65.58  Aligned_cols=51  Identities=20%  Similarity=0.455  Sum_probs=46.3

Q ss_pred             CCccccCc--CCcCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHHHHh
Q 037234            1 MISSKRKK--CGKPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         1 ~kp~~C~~--C~k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~   51 (81)
                      .++|.|..  |++.|.....|..|+++  +++||.| .  |++.|.....|..|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            36899988  99999999999999996  5899999 7  999999999999998765

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.33  E-value=2.1e-12  Score=67.40  Aligned_cols=51  Identities=24%  Similarity=0.414  Sum_probs=47.3

Q ss_pred             CCccccC--cCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            1 MISSKRK--KCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         1 ~kp~~C~--~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +++|.|.  .|++.|.....|..|+++  ++++|.| .|++.|.....|..|+++|
T Consensus        43 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           43 EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHh
Confidence            3689996  699999999999999996  6889999 9999999999999999998

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.33  E-value=7.1e-13  Score=64.46  Aligned_cols=38  Identities=21%  Similarity=0.489  Sum_probs=35.4

Q ss_pred             CCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++||.| .|++.|...+.|..|+++| +|++||.|..+..
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~H-t~ekp~~C~~C~k   40 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAH-LGYRPRSCPECGK   40 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHH-HTCCCEECTTTCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHh-CCCcCeECCCCCC
Confidence            689999 9999999999999999999 9999999987653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.7e-12  Score=69.04  Aligned_cols=51  Identities=24%  Similarity=0.440  Sum_probs=47.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +++|.|..|++.|.....|..|+++  ++++|.| .|++.|.....|..|++.|
T Consensus        35 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   88 (110)
T 2csh_A           35 LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSC   88 (110)
T ss_dssp             CCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHc
Confidence            3689999999999999999999996  5789999 9999999999999999998

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.31  E-value=4.3e-13  Score=63.46  Aligned_cols=48  Identities=15%  Similarity=0.167  Sum_probs=43.2

Q ss_pred             CcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCC
Q 037234           10 GKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAAL   58 (81)
Q Consensus        10 ~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~   58 (81)
                      ++.|.....|..|+++  +++||.| .|++.|...+.|..|+++| +|++||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELR-HFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHH-TTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHh-ccCCCC
Confidence            4677888888888886  6899999 9999999999999999999 899998

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=3.6e-15  Score=74.05  Aligned_cols=56  Identities=21%  Similarity=0.277  Sum_probs=51.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhcCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNCGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      ++||.|..|++.|.....|..     +++|.| .|++.|.....|..|+++| ++++||.|+.
T Consensus        16 ~~~~~C~~C~k~f~~~~~l~~-----~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~~~C~~   72 (73)
T 2ctu_A           16 DRSQKCSKCGIIFIRRSTLSR-----RKTPMCEKCRKDSCQEAALNKDEGNE-SGKKTSGPSS   72 (73)
T ss_dssp             CSEEECSSSCCEEECCCCCCC-----SSSCCCHHHHHTCSCCCSSCCCSSCC-CCCCCSSCCC
T ss_pred             CCCeeCCcccchhCCHHHhCc-----CCCCCCCCCChhhcCHHHHHHHHHhh-cCCCCCCCCC
Confidence            478999999999999888776     689999 9999999999999999999 8999999864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.28  E-value=3.7e-12  Score=65.21  Aligned_cols=51  Identities=24%  Similarity=0.404  Sum_probs=47.0

Q ss_pred             CCccccC--cCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            1 MISSKRK--KCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         1 ~kp~~C~--~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +++|.|.  .|++.|.....|..|+++  ++++|.| .|++.|.....|..|+++|
T Consensus        33 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           33 EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            3689997  699999999999999986  6899999 9999999999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.25  E-value=1.2e-11  Score=69.00  Aligned_cols=50  Identities=20%  Similarity=0.422  Sum_probs=28.5

Q ss_pred             cCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           11 KPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        11 k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +.|.....|..|+++  +.+||.| .  |++.|.....|..|+++| .+++||.|+
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~  101 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH-TGEKPYMCE  101 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHT-TTCCCEECC
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHc-CCCCCeeCC
Confidence            555555555555553  3455555 4  666666666666666655 555555554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.24  E-value=7.4e-12  Score=72.15  Aligned_cols=59  Identities=20%  Similarity=0.327  Sum_probs=31.7

Q ss_pred             CccccC--cCCcCCCChhHHHHHHH-h---cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234            2 ISSKRK--KCGKPFAVKGDWRTHEK-N---CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus         2 kp~~C~--~C~k~f~~~~~l~~h~~-~---~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      ++|.|.  .|++.|.....|..|++ .   +.++|.| .  |++.|.....|..|+++| ++++||.|.
T Consensus        71 ~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~  138 (190)
T 1tf6_A           71 KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH-TQQLPYECP  138 (190)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGG-SSSCSSBCC
T ss_pred             CceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHh-CCCCCccCC
Confidence            345555  55555555555555552 2   2345555 2  555555555555555555 555555553

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.24  E-value=1.1e-11  Score=71.39  Aligned_cols=59  Identities=15%  Similarity=0.290  Sum_probs=46.9

Q ss_pred             Ccccc--CcCCcCCCChhHHHHHHHh--cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234            2 ISSKR--KKCGKPFAVKGDWRTHEKN--CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus         2 kp~~C--~~C~k~f~~~~~l~~h~~~--~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      ++|.|  ..|++.|.....|..|+++  ++++|.| .  |++.|.....|..|+++| .++++|.|+
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~   76 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH-TGEKNFTCD   76 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTT-TTCCCEECC
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHc-cCCCceeCC
Confidence            57788  5788888888888888875  5778888 3  888888888888888888 788888776

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=4.1e-12  Score=57.98  Aligned_cols=35  Identities=34%  Similarity=0.551  Sum_probs=33.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2em4_A            9 GQRPYECIECGKAFKTKSSLICHRRSH-TGEKPSGPS   44 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHHHHHHH-SSSSCCCCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhc-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999985

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4e-12  Score=56.81  Aligned_cols=35  Identities=17%  Similarity=0.305  Sum_probs=32.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   42 (42)
T 2yte_A            7 GEKPYSCAECKETFSDNNRLVQHQKMH-TVKSGPSSG   42 (42)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHHHHHHHT-SCCSSCCCC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999884

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=5.5e-12  Score=57.00  Aligned_cols=36  Identities=19%  Similarity=0.306  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|+.
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   43 (44)
T 2emx_A            7 GEKPFGCSCCEKAFSSKSYLLVHQQTH-AEEKPSGPSS   43 (44)
T ss_dssp             SCCCEECSSSSCEESSHHHHHHHHHHH-TSSCSCSCCC
T ss_pred             CCcCccCCCCCcccCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.21  E-value=5e-12  Score=57.71  Aligned_cols=35  Identities=23%  Similarity=0.474  Sum_probs=33.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2emj_A            9 GEKPFECAECGKSFSISSQLATHQRIH-TGEKPSGPS   44 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHH-TTSCSSSSC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999985

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.21  E-value=4.1e-12  Score=56.83  Aligned_cols=35  Identities=23%  Similarity=0.461  Sum_probs=32.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|.
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   42 (42)
T 2el5_A            7 GENPYECSECGKAFNRKDQLISHQRTH-AGESGPSSG   42 (42)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHGGG-CCCCSCCCC
T ss_pred             CCCCccCCCcChhhCCHHHHHHHHHhc-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999884

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.8e-12  Score=57.15  Aligned_cols=36  Identities=25%  Similarity=0.442  Sum_probs=33.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2emm_A            9 GERPHKCNECGKSFIQSAHLIQHQRIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHH-SCCCTTSSSC
T ss_pred             CCCCeeCCCCChhhCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 9999999864

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=8e-12  Score=56.94  Aligned_cols=36  Identities=22%  Similarity=0.438  Sum_probs=33.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ytj_A            9 GEKPYICAECGKAFTIRSNLIKHQKIH-TKQKPSGPSS   45 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHHHT-SCCCCSSCSC
T ss_pred             CCcCeECCCCChhhCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999863

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=6.6e-12  Score=59.30  Aligned_cols=36  Identities=25%  Similarity=0.602  Sum_probs=19.2

Q ss_pred             CCceEe-ecCcccCChhHHHHHHH-HhcCCCCCCCCCCc
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIK-AFGHGHAALGIECF   63 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~-~~~~~~~p~~~~~~   63 (81)
                      ++||.| .|++.|.....|..|++ +| .+++||.|+.+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H-~~~k~~~C~~C   47 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVH-TSERPHKCQVW   47 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTS-CCCCCCCSSSS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhc-CCCCCccCCCC
Confidence            445555 55555555555555554 44 55555555443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.6e-12  Score=57.24  Aligned_cols=36  Identities=25%  Similarity=0.474  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2emy_A            9 GENPYECHECGKAFSRKYQLISHQRTH-AGEKPSGPSS   45 (46)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHH-TTSCCSCSSC
T ss_pred             CCcCcCCCCCCcccCcHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.3e-12  Score=57.31  Aligned_cols=35  Identities=29%  Similarity=0.544  Sum_probs=33.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~C~   44 (46)
T 2em3_A            9 GEKPYECKVCSKAFTQKAHLAQHQKTH-TGEKPSGPS   44 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHHHH-CCCCCCCSC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999985

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7e-12  Score=57.14  Aligned_cols=36  Identities=25%  Similarity=0.539  Sum_probs=33.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ep2_A            9 GEKPYECSICGKSFTKKSQLHVHQQIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHTT-SSCCSCCSCC
T ss_pred             CCcCcCCCCCCcccCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 9999999864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.6e-12  Score=57.29  Aligned_cols=35  Identities=26%  Similarity=0.493  Sum_probs=33.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2yto_A            9 GEKPYKCSDCGKAFTRKSGLHIHQQSH-TGERHSGPS   44 (46)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHH-TCCCBTTTB
T ss_pred             CCCCEECcccCCccCCHhHHHHHHHHc-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999985

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.2e-12  Score=56.72  Aligned_cols=35  Identities=20%  Similarity=0.390  Sum_probs=32.8

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   44 (44)
T 2eof_A            9 GEKPYECNECQKAFNTKSNLMVHQRTH-TGESGPSSG   44 (44)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHHHHT-TTSSCSCCC
T ss_pred             CCCCeECCCCCcccCCHhHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999884

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.1e-12  Score=57.19  Aligned_cols=35  Identities=23%  Similarity=0.504  Sum_probs=33.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   44 (46)
T 2eoz_A            9 GEKPYSCNVCGKAFVLSAHLNQHLRVH-TQETLSGPS   44 (46)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHHHHHH-SSCCSSSCC
T ss_pred             CCCCeECcccChhhCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999985

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.19  E-value=7e-12  Score=57.19  Aligned_cols=36  Identities=22%  Similarity=0.488  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2emk_A            9 GEKPYECKECGKAFSQTTHLIQHQRVH-TGEKPSGPSS   45 (46)
T ss_dssp             SSCSCBCSSSCCBCSCHHHHHHHHHHH-SSCCCSSCCC
T ss_pred             CCCceECCCCCchhCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.7e-12  Score=57.80  Aligned_cols=35  Identities=29%  Similarity=0.513  Sum_probs=33.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2ytp_A            9 GERHYECSECGKAFARKSTLIMHQRIH-TGEKPSGPS   44 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTT-SCCCCCSSC
T ss_pred             CCCCeECCcCCcccCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999985

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.19  E-value=6.7e-12  Score=57.26  Aligned_cols=36  Identities=25%  Similarity=0.505  Sum_probs=33.3

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ely_A            9 GEKPFKCVECGKGFSRRSALNVHHKLH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSBCCSSSCCCBSSTTHHHHHHHHH-SCCSSCSCCC
T ss_pred             CCCCcccCccCcccCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6e-12  Score=57.37  Aligned_cols=35  Identities=29%  Similarity=0.532  Sum_probs=33.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      ++++|.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2emi_A            9 GERHYECSECGKAFIQKSTLSMHQRIH-RGEKPSGPS   44 (46)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHGGG-CSCCCCSCC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHhHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.2e-12  Score=57.11  Aligned_cols=36  Identities=31%  Similarity=0.623  Sum_probs=33.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2eml_A            9 GEKPYECSVCGKAFSHRQSLSVHQRIH-SGKKPSGPSS   45 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHGGG-SSCCCSCSSC
T ss_pred             CCCCeeCCCcCCccCCHHHHHHHHHHh-cCCCCCCCCC
Confidence            5789999 9999999999999999999 9999999864

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.9e-12  Score=56.79  Aligned_cols=36  Identities=22%  Similarity=0.501  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2ytk_A            9 GEKPYKCNECGKVFTQNSHLTNHWRIH-TGEKPSGPSS   45 (46)
T ss_dssp             SSCSEECSSSCCEESSHHHHHHHHHHH-SSSSCSSCCC
T ss_pred             CCCCEeCCcCCCccCCHHHHHHHHHHH-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.3e-12  Score=57.26  Aligned_cols=35  Identities=26%  Similarity=0.588  Sum_probs=33.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~kp~~C~   44 (46)
T 2eor_A            9 GEKPYNCEECGKAFIHDSQLQEHQRIH-TGEKPSGPS   44 (46)
T ss_dssp             CCCSEECTTTCCEESSHHHHHHHHHHH-HSCCCSSST
T ss_pred             CCcCccCCCCCCCcCCHHHHHHHHHhc-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.9e-12  Score=57.73  Aligned_cols=36  Identities=31%  Similarity=0.575  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2emf_A            9 GGKHFECTECGKAFTRKSTLSMHQKIH-TGEKPSGPSS   45 (46)
T ss_dssp             SSCCEECSSSCCEESCHHHHHHHGGGT-SCSSCSCCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.5e-12  Score=56.74  Aligned_cols=36  Identities=22%  Similarity=0.546  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2em2_A            9 GEKPFKCKECGKAFRQNIHLASHLRIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHH-CCCCSSCSSC
T ss_pred             CCCCEECCcCCchhCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 9999999853

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.7e-12  Score=57.25  Aligned_cols=36  Identities=25%  Similarity=0.503  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2eoo_A            9 GERPYGCNECGKNFGRHSHLIEHLKRH-FREKSSGPSS   45 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHH-HSTTSSCCSC
T ss_pred             CCCCEEccccCcccCCHHHHHHHHHHH-cCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.18  E-value=6.9e-12  Score=57.16  Aligned_cols=36  Identities=25%  Similarity=0.493  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ema_A            9 GEKRYKCNECGKVFSRNSQLSQHQKIH-TGEKPSGPSS   45 (46)
T ss_dssp             TSCCEECSSSCCEESSHHHHHHHHTGG-GCCCCCSSSC
T ss_pred             CCcCcCCCCCcchhCCHHHHHHHHHhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.7e-12  Score=57.20  Aligned_cols=36  Identities=31%  Similarity=0.593  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2emh_A            9 GERPYICTVCGKAFTDRSNLIKHQKIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECTTTCCEESSHHHHHHHHHHH-HCSSCSSSCC
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.9e-12  Score=57.21  Aligned_cols=35  Identities=20%  Similarity=0.411  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2eoh_A            9 GKKPYECKECRKTFIQIGHLNQHKRVH-TGERSSGPS   44 (46)
T ss_dssp             CSCSCCCSSSCCCCSSHHHHHHHHHHC-SSCCSCSTT
T ss_pred             CCCCcCCCCcCchhCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999885

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.7e-12  Score=57.22  Aligned_cols=36  Identities=25%  Similarity=0.529  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ene_A            9 GEKPYKCNECGKVFRHNSYLSRHQRIH-TGEKPSGPSS   45 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHHHHTTT-CCCCCCSCCC
T ss_pred             CCCCeECCCCCchhCChHHHHHHHhhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.9e-12  Score=56.92  Aligned_cols=36  Identities=22%  Similarity=0.473  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2eoe_A            9 GEKPYKCNECGKVFTQNSHLANHQRIH-TGVKPSGPSS   45 (46)
T ss_dssp             CCCSSEETTTTEECSSHHHHHHHHGGG-SCCCSCSSCC
T ss_pred             CCCCeECCCcChhhCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.6e-11  Score=55.28  Aligned_cols=35  Identities=23%  Similarity=0.367  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2eom_A            9 GERGHRCSDCGKFFLQASNFIQHRRIH-TGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCSSSCCCCSSHHHHHHHHHHH-SSCCCSSCC
T ss_pred             CCCCcCCCCCCCeeCChHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999985

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.6e-12  Score=56.63  Aligned_cols=36  Identities=22%  Similarity=0.316  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2epw_A            9 GEKPCKCTECGKAFCWKSQLIMHQRTH-VDDKHSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESSSHHHHHHHHHC-CSCCCSCCCC
T ss_pred             CCCCeeCCCCCCccCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6e-12  Score=57.37  Aligned_cols=36  Identities=25%  Similarity=0.500  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2ep3_A            9 GEKPYRCAECGKAFTDRSNLFTHQKIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHTTT-TTSCCCCTTC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999853

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.5e-12  Score=56.85  Aligned_cols=36  Identities=25%  Similarity=0.423  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2emp_A            9 GVKPYMCNECGKAFSVYSSLTTHQVIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHHHHHHHH-HCCSCCSCCC
T ss_pred             CCcCeECCCCCchhCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.1e-11  Score=56.49  Aligned_cols=36  Identities=28%  Similarity=0.499  Sum_probs=33.3

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2eov_A            9 GEKPYKCSDCGKSFTWKSRLRIHQKCH-TGERHSGPSS   45 (46)
T ss_dssp             SCCSCBCSSSCCBCSSHHHHHHHHHHH-SCCSSCCSCC
T ss_pred             CCCCccCCccChhhCCHHHHHHHHHhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.4e-12  Score=57.02  Aligned_cols=36  Identities=22%  Similarity=0.521  Sum_probs=33.2

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2eq4_A            9 GEKLYNCKECGKSFSRAPCLLKHERLH-SGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCBTTTTBCCSCHHHHHHHHHHC-CSSSCCCCCC
T ss_pred             CCCCeECCCCCCccCchHHHHHHHHhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=9.4e-12  Score=56.20  Aligned_cols=35  Identities=14%  Similarity=0.284  Sum_probs=32.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   44 (44)
T 2yu5_A            9 GENPFKCSKCDRVFTQRNYLVQHERTH-ARKSGPSSG   44 (44)
T ss_dssp             CCCSEECSSSSCEESSSHHHHHHHHHC-CCCCSSCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHhHhc-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999883

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.5e-12  Score=56.96  Aligned_cols=35  Identities=26%  Similarity=0.451  Sum_probs=32.8

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   44 (44)
T 2eoj_A            9 GENPYECCECGKVFSRKDQLVSHQKTH-SGQSGPSSG   44 (44)
T ss_dssp             SCCSCEETTTTEECSSHHHHHHHHTTS-SSSCSCCCC
T ss_pred             CCcCeeCCCCCCccCCHHHHHHHHHHc-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999884

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.8e-12  Score=57.13  Aligned_cols=35  Identities=26%  Similarity=0.553  Sum_probs=33.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2yrj_A            9 GEKPYRCGECGKAFAQKANLTQHQRIH-TGEKPSGPS   44 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTT-SSCCSSCSC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHc-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.5e-12  Score=57.51  Aligned_cols=35  Identities=31%  Similarity=0.503  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   44 (46)
T 2emg_A            9 GENPFICSECGKVFTHKTNLIIHQKIH-TGERPSGPS   44 (46)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHHHHHTTT-SCCCCSCSC
T ss_pred             CCCCEECCccCcccCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.7e-12  Score=57.17  Aligned_cols=35  Identities=26%  Similarity=0.539  Sum_probs=33.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~p~~C~   44 (46)
T 2yts_A            9 GEKPYICNECGKSFIQKSHLNRHRRIH-TGEKPSGPS   44 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHGGGT-SSCCSSCCC
T ss_pred             CCcCEECCCCChhhCChHHHHHHHHhc-CCCCCcCCC
Confidence            5789999 9999999999999999999 899999985

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.16  E-value=6.5e-12  Score=57.20  Aligned_cols=36  Identities=22%  Similarity=0.359  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2el4_A            9 GVKPYGCSQCAKTFSLKSQLIVHQRSH-TGVKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHGGGS-SSCCCSCCTT
T ss_pred             CCCceECCCCCchhCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 9999999864

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=56.41  Aligned_cols=36  Identities=22%  Similarity=0.520  Sum_probs=33.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2en1_A            9 GEKPFKCEECGKRFTQNSQLHSHQRVH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGG-SCCCCSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.8e-12  Score=57.43  Aligned_cols=35  Identities=23%  Similarity=0.432  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2enf_A            9 GEKPYKCNECGKVFTQNSHLVRHRGIH-TGEKPSGPS   44 (46)
T ss_dssp             CCCSCBCSSSCCBCSSHHHHHHHHTTT-TTSSCCCCS
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHhh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.8e-12  Score=57.14  Aligned_cols=35  Identities=26%  Similarity=0.488  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2ep1_A            9 GEKPYECSDCGKSFIKKSQLHVHQRIH-TGENPSGPS   44 (46)
T ss_dssp             SCCSSCCSSSCCCCSSHHHHHHHHGGG-SSSCCCSSS
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.16  E-value=3.7e-11  Score=54.08  Aligned_cols=35  Identities=23%  Similarity=0.423  Sum_probs=32.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   42 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTLQT-HSDKSGPSS   42 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHHHH-TCTTCSSSC
T ss_pred             CCCCEECCCCCCeeCChHHHHHHHHhh-CCCCCccCC
Confidence            5789999 9999999999999999999 899999885

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.1e-11  Score=54.47  Aligned_cols=35  Identities=26%  Similarity=0.508  Sum_probs=33.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2eow_A            9 GEKPYKCNECGKAFRARSSLAIHQATH-SGEKPSGPS   44 (46)
T ss_dssp             CCCCEECTTSCCEESSHHHHHHHHHHH-CCCSCSCTT
T ss_pred             CCCCeeccccCChhcCHHHHHHHHHHc-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999985

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=9.1e-12  Score=56.81  Aligned_cols=36  Identities=25%  Similarity=0.495  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2em5_A            9 STKSHQCHECGRGFTLKSHLNQHQRIH-TGEKPSGPSS   45 (46)
T ss_dssp             CSCSEECSSSCCEESSHHHHHHHHTTT-SCSCCSSCCC
T ss_pred             CCCCeECCcCCCccCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 9999999864

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.2e-12  Score=56.95  Aligned_cols=36  Identities=25%  Similarity=0.479  Sum_probs=33.2

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ytq_A            9 GEKPYGCSECGKAFSSKSYLIIHMRTH-SGEKPSGPSS   45 (46)
T ss_dssp             CCCSCBCSSSCCBCSCHHHHHHHHTTT-CCSCSSCCCC
T ss_pred             CCCCcCCCccChhhCChHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.7e-12  Score=57.01  Aligned_cols=36  Identities=22%  Similarity=0.469  Sum_probs=33.2

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2epz_A            9 GEKPFDCIDCGKAFSDHIGLNQHRRIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSBCCTTTCCCBSSHHHHHHHHTTT-TTCCCCSSCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.4e-11  Score=56.11  Aligned_cols=36  Identities=22%  Similarity=0.455  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2eme_A            9 GEKPYVCDYCGKAFGLSAELVRHQRIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHGGG-CCCSCCSSCC
T ss_pred             CCCCeECCCCChhhCCHHHHHHHHHhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.8e-11  Score=53.99  Aligned_cols=36  Identities=22%  Similarity=0.502  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2ytd_A            9 GEKPYKCSECGKAFHRHTHLNEHRRIH-TGYRPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHH-TCCCSSCSSC
T ss_pred             CCcCeECCCCCCeeCChHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 9999999864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.5e-12  Score=57.10  Aligned_cols=36  Identities=22%  Similarity=0.520  Sum_probs=33.3

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2yth_A            9 GEKPFQCEECGKRFTQNSHLHSHQRVH-TGEKPSGPSS   45 (46)
T ss_dssp             CSSSBCCSSSCCCBSSHHHHHHHGGGG-TTCCCSSCCC
T ss_pred             CCcCCCCCCCCcccCCHHHHHHHHHhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 9999999853

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.1e-12  Score=57.17  Aligned_cols=36  Identities=19%  Similarity=0.487  Sum_probs=33.2

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2elz_A            9 VEKPYKCEDCGKGYNRRLNLDMHQRVH-MGEKTSGPSS   45 (46)
T ss_dssp             CCSSCBCSSSCCBCSSHHHHHHHGGGG-GSCCCCCSCC
T ss_pred             CCCCeeCcccCchhCCHHHHHHHHHhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.7e-12  Score=57.26  Aligned_cols=35  Identities=26%  Similarity=0.625  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2em6_A            9 GEKCYKCDVCGKEFSQSSHLQTHQRVH-TGEKPSGPS   44 (46)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHTTT-SSSCCCCTT
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHc-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.5e-12  Score=56.90  Aligned_cols=35  Identities=23%  Similarity=0.441  Sum_probs=32.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   44 (44)
T 2en7_A            9 GMKPYVCNECGKAFRSKSYLIIHTRTH-TGESGPSSG   44 (44)
T ss_dssp             SSSSSCCTTTCCCCSSHHHHHHHHTTT-CCSSSSCCC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHhhhc-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999884

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=9.4e-12  Score=56.66  Aligned_cols=36  Identities=22%  Similarity=0.408  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2en8_A            9 GEKSHTCDECGKNFCYISALRIHQRVH-MGEKCSGPSS   45 (46)
T ss_dssp             CCSSEECTTTCCEESSHHHHHHHHTTT-CCSCSSCCSC
T ss_pred             CCCCeECCCcCcccCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.15  E-value=1e-11  Score=56.52  Aligned_cols=36  Identities=22%  Similarity=0.508  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2em9_A            9 GEKPYNCKECGKSFRWASCLLKHQRVH-SGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHGGGG-TSCCCCSTTC
T ss_pred             CCcCeECCccccccCChHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.15  E-value=4.6e-11  Score=53.25  Aligned_cols=34  Identities=21%  Similarity=0.397  Sum_probs=31.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|
T Consensus         8 ~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQCGKSFTQRGSLAVHQRSC-SQSGPSSG   42 (42)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHT-TCCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHhhhc-CCCCCCCC
Confidence            5789999 9999999999999999999 99999976

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=5.2e-11  Score=54.16  Aligned_cols=36  Identities=19%  Similarity=0.424  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2enc_A            9 GEKPFKCEECGKGFYTNSQCYSHQRSH-SGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHS-CCSSCCSSCC
T ss_pred             CCCCcCCCCCCCcCCChHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 9999999864

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.5e-12  Score=57.04  Aligned_cols=36  Identities=22%  Similarity=0.430  Sum_probs=33.2

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ytn_A            9 GKKPYKCNECGKVFTQNSHLARHRGIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHGGGT-SCCCCCSCCC
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHhhhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.15  E-value=7.8e-12  Score=56.99  Aligned_cols=36  Identities=25%  Similarity=0.488  Sum_probs=33.2

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2em0_A            9 GEKTWKCRECDMCFSQASSLRLHQNVH-VGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCCCCSSHHHHHHHGGGG-SSSSCSCSSC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHc-CCCCCcCCCC
Confidence            5789999 9999999999999999999 8999999864

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.8e-11  Score=54.00  Aligned_cols=36  Identities=25%  Similarity=0.506  Sum_probs=33.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2en6_A            9 GEKPYGCNECGKTFSQKSILSAHQRTH-TGEKPSGPSS   45 (46)
T ss_dssp             SSCCEEETTTTEEESSHHHHHHHHHHH-SSCCCSSSCC
T ss_pred             CCcCeECCCCCcccCchHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.9e-11  Score=54.86  Aligned_cols=35  Identities=23%  Similarity=0.441  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLVTHQRIH-TGEKSGPSS   44 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHHHTTT-SSCCCCCSC
T ss_pred             CCcCccCCCCCCccCChHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.5e-12  Score=56.86  Aligned_cols=36  Identities=22%  Similarity=0.459  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2yu8_A            9 GEKPYKCNECGKVFTQNSHLARHRRVH-TGGKPSGPSS   45 (46)
T ss_dssp             CCSSEECSSSCCEESSSHHHHHHTHHH-HSCCCSCSCC
T ss_pred             CCCCeECCcCCchhCCHHHHHHHHHhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6e-12  Score=57.38  Aligned_cols=36  Identities=25%  Similarity=0.573  Sum_probs=33.2

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2eq2_A            9 GGKPYQCNECGKAFSQTSKLARHQRVH-TGEKPSGPSS   45 (46)
T ss_dssp             SSCSSSCCSSCCCCSSHHHHHHHGGGG-CCCCCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999853

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1e-11  Score=56.62  Aligned_cols=36  Identities=25%  Similarity=0.477  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2ysp_A            9 GEKPYKCEKCGKGYNSKFNLDMHQKVH-TGERPSGPSS   45 (46)
T ss_dssp             SCCSEEETTTTEEESCHHHHHHHHTTS-CSCCSSCCSC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHhh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.7e-12  Score=57.21  Aligned_cols=35  Identities=23%  Similarity=0.489  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2eq1_A            9 GEKPYKCNECGKAFRAHSNLTTHQVIH-TGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCTTTTCCCSSHHHHHHHHTTT-CCSCCSSCC
T ss_pred             CCCCeECCcCChhhCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.1e-12  Score=56.71  Aligned_cols=36  Identities=22%  Similarity=0.406  Sum_probs=33.2

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2eop_A            9 GEKPHECRECGKSFSFNSQLIVHQRIH-TGENPSGPSS   45 (46)
T ss_dssp             CCCSCBCTTTCCBCSSHHHHHHHHTTT-TTSCCSCCCC
T ss_pred             CCCCeeCCCCCchhCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.1e-11  Score=54.45  Aligned_cols=35  Identities=23%  Similarity=0.425  Sum_probs=33.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2ytf_A            9 GEKPFECSECQKAFNTKSNLIVHQRTH-TGEKPSGPS   44 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHTS-CSSSSSCCC
T ss_pred             CCCCcCCCCCCcccCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.2e-11  Score=54.51  Aligned_cols=35  Identities=23%  Similarity=0.479  Sum_probs=33.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2en9_A            9 GKKLFKCNECKKTFTQSSSLTVHQRIH-TGEKPSGPS   44 (46)
T ss_dssp             SSCCCBCTTTCCBCSSHHHHHHHHHHH-TSSCCCSCC
T ss_pred             CCCCEECCccCcccCCHHHHHHHHHHc-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999985

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=4e-11  Score=54.10  Aligned_cols=35  Identities=23%  Similarity=0.386  Sum_probs=32.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (44)
T 2eou_A            9 AKTTSECQECGKIFRHSSLLIEHQALH-AGESGPSSG   44 (44)
T ss_dssp             SSCCCCCTTTCCCCSSHHHHHHHHHHH-TTSCCCCCC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHH-CCCCCCCCC
Confidence            5789999 9999999999999999999 999999884

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=9e-12  Score=66.67  Aligned_cols=55  Identities=16%  Similarity=0.286  Sum_probs=47.5

Q ss_pred             cccCcCCcCC--CChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCC
Q 037234            4 SKRKKCGKPF--AVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALG   59 (81)
Q Consensus         4 ~~C~~C~k~f--~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~   59 (81)
                      +.|..|++.|  .....|..|+++  +++||.| .|++.|.....|..|++++ ......+
T Consensus        51 ~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h-h~~~~~~  110 (115)
T 2dmi_A           51 ETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT-KHYQKVS  110 (115)
T ss_dssp             CCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHT-TTTTCSC
T ss_pred             ccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHh-CCcccCC
Confidence            3499999999  888999999986  5899999 9999999999999999998 5554443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.5e-11  Score=54.08  Aligned_cols=36  Identities=19%  Similarity=0.438  Sum_probs=33.3

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2eoq_A            9 GEKPFKCDICGKSFCGRSRLNRHSMVH-TAEKPSGPSS   45 (46)
T ss_dssp             SSCSCCCSSSCCCCSSHHHHHHHHHHT-TCCCSSSCCC
T ss_pred             CCCCcCCCcCCchhCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=7e-11  Score=53.72  Aligned_cols=36  Identities=25%  Similarity=0.337  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|..
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2yso_A            9 REKSHQCRECGEIFFQYVSLIEHQVLH-MGQKNSGPSS   45 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHH-SCCSCCCTTC
T ss_pred             CCCCEEccccChhhCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 9999999864

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.13  E-value=5.4e-11  Score=54.15  Aligned_cols=36  Identities=19%  Similarity=0.265  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2el6_A            9 GVNPYKCSQCEKSFSGKLRLLVHQRMH-TREKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGG-CCSSCCSCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.1e-11  Score=53.65  Aligned_cols=34  Identities=29%  Similarity=0.547  Sum_probs=31.8

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHERIH-TGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHGGGC-CCCSCSCC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHHHHh-CCCCCcCC
Confidence            5789999 9999999999999999999 89999976

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.3e-12  Score=56.67  Aligned_cols=36  Identities=22%  Similarity=0.493  Sum_probs=33.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|..
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2ytr_A            9 GEKPYKCNECGKAFSQTSKLARHQRIH-TGEKPSGPSS   45 (46)
T ss_dssp             SCCTTCCTTTCCCCSSHHHHHHHHTTT-TTCSCCCSCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999998864

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.9e-11  Score=54.01  Aligned_cols=36  Identities=22%  Similarity=0.475  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2em8_A            9 GEKPYKCVECGKGYKRRLDLDFHQRVH-TGEKLSGPSS   45 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHHHH-HCCCCCCSCC
T ss_pred             CCCCeECcccCchhCCHHHHHHHHHHH-cCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1e-11  Score=56.49  Aligned_cols=35  Identities=26%  Similarity=0.498  Sum_probs=33.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2eq3_A            9 GEKPYECNQCGKAFSVRSSLTTHQAIH-TGKKPSGPS   44 (46)
T ss_dssp             CCCSSEETTTTEECSSHHHHHHHHTTS-CCCCCCCSC
T ss_pred             CCCCeECCCCChhhCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=4.8e-11  Score=54.27  Aligned_cols=36  Identities=25%  Similarity=0.481  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2em7_A            9 GEKPYKCEECGKGFICRRDLYTHHMVH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHHHHGGGG-TTCCCSSTTC
T ss_pred             CCcCccCCCccchhCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.3e-11  Score=53.79  Aligned_cols=34  Identities=21%  Similarity=0.461  Sum_probs=31.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C   42 (42)
T 2en2_A            8 GEKPYKCETCGARFVQVAHLRAHVLIH-TGSGPSSG   42 (42)
T ss_dssp             SSCSEECTTTCCEESSHHHHHHHTHHH-HSCCSSCC
T ss_pred             CCCCEeCCCcChhhCCHHHHHHHHHHc-CCCCCCCC
Confidence            5789999 9999999999999999999 89999976

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.4e-11  Score=54.10  Aligned_cols=36  Identities=22%  Similarity=0.446  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2eq0_A            9 GEKPYKCHECGKVFRRNSHLARHQLIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHTTT-CCCCCSCCSC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=4.5e-11  Score=53.88  Aligned_cols=35  Identities=17%  Similarity=0.389  Sum_probs=32.8

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   44 (44)
T 2emb_A            9 TRKRYECSKCQATFNLRKHLIQHQKTH-AAKSGPSSG   44 (44)
T ss_dssp             CCSSEECTTTCCEESCHHHHHHHGGGG-CCCCCTTCC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHc-CCCCCcCCC
Confidence            5789999 9999999999999999999 899999884

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.2e-11  Score=56.40  Aligned_cols=35  Identities=14%  Similarity=0.256  Sum_probs=32.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCC-CCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHG-HAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~-~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++ ++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~~C~   45 (46)
T 2eoy_A            9 KEKCFKCNKCEKTFSCSKYLTQHERIH-TRGVKSGPSS   45 (46)
T ss_dssp             CSCCEECSSSCCEESSSHHHHHHHTTC-CSCCTTSSSC
T ss_pred             CCCCEECcCCCCcCCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 89 9999884

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.9e-12  Score=56.26  Aligned_cols=34  Identities=29%  Similarity=0.516  Sum_probs=31.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C   42 (42)
T 2ytb_A            8 GEKPYRCDQCGKAFSQKGSLIVHIRVH-TGSGPSSG   42 (42)
T ss_dssp             SCCSBCCTTTTCCBSSHHHHHTTGGGT-SCCSCCCC
T ss_pred             CCCCeeCCCccchhCCHHHHHHHHHHh-CCCCCCCC
Confidence            5789999 9999999999999999999 89999976

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.8e-11  Score=53.75  Aligned_cols=36  Identities=25%  Similarity=0.456  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ep0_A            9 GEKPYKCDVCHKSFRYGSSLTVHQRIH-TGEKPSGPSS   45 (46)
T ss_dssp             TCCSEECSSSCCEESSHHHHHHHHTTT-SSSCCCSCCC
T ss_pred             CCCCeeCcccCcccCChHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.3e-11  Score=56.22  Aligned_cols=35  Identities=23%  Similarity=0.468  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~C~   44 (46)
T 2en3_A            9 GEKPFQCKECGMNFSWSCSLFKHLRSH-ERTDPSGPS   44 (46)
T ss_dssp             CCCSEECSSSCCEESSSHHHHHHHHHH-HHSCCSSCS
T ss_pred             CCCCeeCcccChhhCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999885

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=1.2e-10  Score=52.77  Aligned_cols=37  Identities=24%  Similarity=0.492  Sum_probs=33.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCc
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECF   63 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~   63 (81)
                      +++||.| .|++.|.....|..|+++| +++++|.|...
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~~~C~~c   44 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSH-DGSVGKSGPSS   44 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHH-SCCCCCCCCCC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHc-cCCCCCCCcCC
Confidence            5789999 9999999999999999999 89999988653

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.4e-11  Score=54.19  Aligned_cols=36  Identities=22%  Similarity=0.467  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2ytm_A            9 GEKPYKCMECGKAFGDNSSCTQHQRLH-TGQRPSGPSS   45 (46)
T ss_dssp             SCCSSSBTTTTBCCSSHHHHHHHHHHH-HSCCCCCCCC
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999998864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.8e-11  Score=54.71  Aligned_cols=35  Identities=26%  Similarity=0.527  Sum_probs=32.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2eon_A            9 GEKPYKCQVCGKAFRVSSHLVQHHSVH-SGERPSGPS   44 (46)
T ss_dssp             SCCSCBCSSSCCBCSSHHHHHHHTTTT-TSCCSCTTS
T ss_pred             CCcccCCCCCCcccCcHHHHHHHHHhc-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.3e-11  Score=54.45  Aligned_cols=35  Identities=23%  Similarity=0.444  Sum_probs=32.8

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2yti_A            9 GEKPYKCNECGKVFTQNSHLARHRGIH-TGEKPSGPS   44 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTTT-SCSCCSSTT
T ss_pred             CCcCeECCCCCcccCChhHHHHHhHhc-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-11  Score=54.75  Aligned_cols=35  Identities=29%  Similarity=0.570  Sum_probs=32.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2enh_A            9 GEKPYECDVCRKAFSHHASLTQHQRVH-SGEKPSGPS   44 (46)
T ss_dssp             CSSSCBCTTTCCBCSSSHHHHHHGGGS-CCSCCCCCC
T ss_pred             CCCCcCCCCcCchhCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999885

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=7.2e-11  Score=54.28  Aligned_cols=38  Identities=18%  Similarity=0.317  Sum_probs=33.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      .+++|.| .|++.|.....|..|+++| ++++||.|+.+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C~   47 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSH-SGEKPYSSGPSS   47 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGS-CSCCCCCSCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhc-CCCCCccCCCCC
Confidence            4689999 9999999999999999999 899999987654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.09  E-value=9.6e-11  Score=59.21  Aligned_cols=50  Identities=20%  Similarity=0.324  Sum_probs=45.2

Q ss_pred             CCccccCc--CCcCCCChhHHHHHHHhcCCceEe-e---cCcccCChhHHHHHHHHh
Q 037234            1 MISSKRKK--CGKPFAVKGDWRTHEKNCGRIWYC-V---CGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         1 ~kp~~C~~--C~k~f~~~~~l~~h~~~~~~p~~C-~---C~~~f~~~~~l~~H~~~~   51 (81)
                      ++||.|..  |++.|.....|..|++++.. |.| .   |++.|.....|..|+++|
T Consensus        29 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~C~~~~~C~~~f~~~~~l~~H~~~h   84 (85)
T 2j7j_A           29 QLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWTLYLKHVAEC   84 (85)
T ss_dssp             TCCEECCSTTCCCEESSHHHHHHHHHHHHS-EECCSCSSCCCEESSHHHHHHHHHHC
T ss_pred             CCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            46899988  99999999999999997433 999 8   999999999999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.5e-11  Score=53.37  Aligned_cols=34  Identities=26%  Similarity=0.665  Sum_probs=31.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.|
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C   42 (42)
T 2eos_A            8 GEKPYPCEICGTRFRHLQTLKSHLRIH-TGSGPSSG   42 (42)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHTTTT-SCCSSTTC
T ss_pred             CCCCEECCCCCCccCCHHHHHHHHHhc-CCCCCCCC
Confidence            5789999 9999999999999999999 89999976

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.8e-11  Score=54.32  Aligned_cols=35  Identities=23%  Similarity=0.509  Sum_probs=32.8

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2emz_A            9 GERPFKCNECGKGFGRRSHLAGHLRLH-SREKSSGPS   44 (46)
T ss_dssp             CCCSCCCSSSCCCCSSHHHHHHHHHHH-HHTTCCCSC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHh-CCCCCCCCC
Confidence            5789999 9999999999999999999 899999985

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.9e-11  Score=53.32  Aligned_cols=36  Identities=25%  Similarity=0.462  Sum_probs=33.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHH-HhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIK-AFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~-~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|++ +| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~~H-~~~k~~~C~~   46 (47)
T 2epx_A            9 GKKPYECIECGKAFIQNTSLIRHWRYYH-TGEKPSGPSS   46 (47)
T ss_dssp             CCCSBCCSSSCCCBSSHHHHHHHHTTTT-TTSCSSSCCC
T ss_pred             CCCCEECCccCchhCChHHHHHHhHhhc-CCCCCCCCCC
Confidence            5789999 99999999999999999 99 8999999864

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.5e-11  Score=53.12  Aligned_cols=34  Identities=21%  Similarity=0.373  Sum_probs=32.3

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~C   43 (44)
T 2eox_A            9 DSKSYNCNECGKAFTRIFHLTRHQKIH-TRKSGPSS   43 (44)
T ss_dssp             CCCCEEETTTTEEESSSHHHHTTHHHH-CCCCCCSC
T ss_pred             CCCCeECcccCcccCCHHHHHHHHHHh-CCCCCCCC
Confidence            5789999 9999999999999999999 99999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.1e-11  Score=54.18  Aligned_cols=36  Identities=19%  Similarity=0.513  Sum_probs=33.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ytg_A            9 GEKPFKCGECGKSYNQRVHLTQHQRVH-TGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECTTTCCEESSSHHHHTTGGGG-SSCCSSCSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999999864

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-10  Score=52.47  Aligned_cols=34  Identities=24%  Similarity=0.378  Sum_probs=32.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~~   43 (44)
T 2epv_A            9 GEKPYECNECGKAFIWKSLLIVHERTH-AGVSGPSS   43 (44)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHGGG-SSCSCCCC
T ss_pred             CCcCeECCCCCcccCchHHHHHHHhHh-cCCCCCCC
Confidence            5789999 9999999999999999999 99999976

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.3e-11  Score=54.18  Aligned_cols=36  Identities=19%  Similarity=0.377  Sum_probs=32.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLTQHWITH-TREKPSGPSS   45 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTHH-HHCCCCSCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            5789999 9999999999999999999 8999998864

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.05  E-value=1.5e-10  Score=49.23  Aligned_cols=31  Identities=19%  Similarity=0.290  Sum_probs=26.7

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCCCCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALG   59 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~   59 (81)
                      +||.| .|++.|...+.|..|+++| ++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLH-ELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHH-TTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHh-CCCCCCC
Confidence            47888 8999999999999999998 8888873

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.03  E-value=2.4e-10  Score=50.20  Aligned_cols=34  Identities=21%  Similarity=0.410  Sum_probs=31.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGI   60 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~   60 (81)
                      +++||.| .|++.|...+.|..|+++| ++++||.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVH-RRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTT-CCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHc-CCCcccee
Confidence            4689999 9999999999999999999 89999954

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=7.5e-11  Score=54.21  Aligned_cols=36  Identities=14%  Similarity=0.122  Sum_probs=33.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGS   36 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~   36 (81)
                      +++|.|..|++.|.....|..|+++  +++||.| .|++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4789999999999999999999997  5899999 9985

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=1.1e-09  Score=57.40  Aligned_cols=54  Identities=13%  Similarity=0.061  Sum_probs=46.9

Q ss_pred             CcCCCChhHHHHHHHh--cCCceEe-ecCccc-CChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           10 GKPFAVKGDWRTHEKN--CGRIWYC-VCGSDF-KHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        10 ~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f-~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ...|.....+..|+++  +.++|.| .|++.| ....+|..|+++|  +++||.|+.+..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h--~~k~~~C~~Cgk   70 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC--KQEMFTCHHCGK   70 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH--CCCCCCCSSSCC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH--CCCCeECCCCCC
Confidence            3457777888888885  6899999 999999 9999999999998  899999987764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.99  E-value=1.7e-11  Score=62.96  Aligned_cols=51  Identities=12%  Similarity=0.110  Sum_probs=46.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh-cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN-CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~-~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ++||.|..|++.|.....|..|+++ +..+|.| .|++.|.....|..|++.+
T Consensus        29 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~   81 (88)
T 1llm_C           29 EKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARL   81 (88)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHH
Confidence            4689999999999999999999997 4678999 9999999999999998866

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=7.2e-10  Score=52.11  Aligned_cols=40  Identities=25%  Similarity=0.220  Sum_probs=36.6

Q ss_pred             CCccccCcCCcCCCChhHHHHHHH-h--cCCceEe-ecCcccCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEK-N--CGRIWYC-VCGSDFKH   40 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~-~--~~~p~~C-~C~~~f~~   40 (81)
                      ++||.|..|++.|.....|..|++ +  +++||.| .|++.|.+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            478999999999999999999987 5  5899999 99999976

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=3.2e-10  Score=51.26  Aligned_cols=35  Identities=17%  Similarity=0.074  Sum_probs=32.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCG   35 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~   35 (81)
                      ++||.|..|++.|.....|..|+++  ++++|.| .||
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5799999999999999999999996  6889999 886

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=5.3e-10  Score=50.79  Aligned_cols=34  Identities=21%  Similarity=0.149  Sum_probs=31.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           10 EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4799999999999999999999996  6899999 76

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=5.6e-10  Score=50.55  Aligned_cols=34  Identities=21%  Similarity=0.080  Sum_probs=31.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           10 EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4789999999999999999999997  5889999 76

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.95  E-value=5.1e-10  Score=50.80  Aligned_cols=34  Identities=21%  Similarity=0.127  Sum_probs=31.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A           10 EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4799999999999999999999996  6899999 76

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.95  E-value=3e-10  Score=53.60  Aligned_cols=39  Identities=23%  Similarity=0.370  Sum_probs=32.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|..+..
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   40 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTH-TGEKPYKCEFCEY   40 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHH-HCCCCEECSSSSC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHc-CCCCCcCCCCCcc
Confidence            3579999 9999999999999999999 8999999987653

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6.8e-10  Score=50.27  Aligned_cols=34  Identities=29%  Similarity=0.245  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A           10 EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4789999999999999999999996  6889999 76

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.94  E-value=9.2e-10  Score=46.88  Aligned_cols=31  Identities=29%  Similarity=0.584  Sum_probs=27.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAA   57 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p   57 (81)
                      +++||.| .|++.|...+.|..|+++| ++++|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h-~~~kp   35 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREV-HGAAQ   35 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHT-SCTTC
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHH-cCCCC
Confidence            4689999 9999999999999999999 78765

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.94  E-value=5.8e-10  Score=50.61  Aligned_cols=34  Identities=18%  Similarity=0.143  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A           10 EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6889998 76

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.1e-10  Score=50.81  Aligned_cols=34  Identities=15%  Similarity=0.126  Sum_probs=31.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A           10 EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4799999999999999999999996  6889999 76

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.7e-10  Score=50.88  Aligned_cols=34  Identities=18%  Similarity=0.101  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            4789999999999999999999996  6889999 76

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=5.4e-10  Score=50.71  Aligned_cols=34  Identities=18%  Similarity=0.093  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           10 EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999996  5889999 76

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=6.9e-10  Score=50.31  Aligned_cols=34  Identities=18%  Similarity=0.100  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           10 EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6889998 76

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.93  E-value=6.2e-10  Score=57.42  Aligned_cols=39  Identities=21%  Similarity=0.500  Sum_probs=35.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ..++|.| .|++.|.....|..|+++| ++++||.|+.++.
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H-~~~k~~~C~~C~k   64 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLL-HAAQVFPCKYCPA   64 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTT-SCSSSEECTTSSC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhc-cCCCccCCCCCCC
Confidence            3678999 9999999999999999999 8999999987764

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=6.1e-10  Score=50.44  Aligned_cols=34  Identities=18%  Similarity=0.165  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           10 EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4789999999999999999999996  5889999 76

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=5.8e-10  Score=50.56  Aligned_cols=34  Identities=15%  Similarity=0.032  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A           10 EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4799999999999999999999996  6889999 76

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=4.9e-10  Score=50.36  Aligned_cols=34  Identities=15%  Similarity=-0.004  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            8 EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4799999999999999999999996  6889999 76

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.92  E-value=5.8e-10  Score=50.55  Aligned_cols=34  Identities=15%  Similarity=0.062  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A           10 EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            4799999999999999999999996  6889999 76

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.1e-09  Score=47.33  Aligned_cols=31  Identities=39%  Similarity=0.772  Sum_probs=28.3

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAA   57 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p   57 (81)
                      +++||.| .|++.|....+|..|+++| ++++|
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~h-~~~kp   37 (37)
T 2elo_A            6 SGRSYSCPVCEKSFSEDRLIKSHIKTN-HPEVS   37 (37)
T ss_dssp             CCCCCEETTTTEECSSHHHHHHHHHHH-CSSCC
T ss_pred             CCCCcCCCCCCCccCCHHHHHHHHHHH-cCCCC
Confidence            5789999 9999999999999999999 88875

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=5.3e-10  Score=50.73  Aligned_cols=34  Identities=18%  Similarity=0.082  Sum_probs=31.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A           10 ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4789999999999999999999996  6899999 76

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.9e-10  Score=50.81  Aligned_cols=34  Identities=18%  Similarity=0.154  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A           10 ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6889999 76

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.9e-10  Score=50.25  Aligned_cols=34  Identities=15%  Similarity=0.169  Sum_probs=30.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           10 EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6889999 76

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7e-10  Score=50.34  Aligned_cols=34  Identities=15%  Similarity=0.005  Sum_probs=31.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           10 EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6899999 76

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.1e-10  Score=50.54  Aligned_cols=34  Identities=18%  Similarity=0.145  Sum_probs=31.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A           10 EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4789999999999999999999996  6899999 76

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6e-10  Score=50.52  Aligned_cols=34  Identities=21%  Similarity=0.169  Sum_probs=31.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A           10 VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6899999 76

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.4e-10  Score=50.60  Aligned_cols=34  Identities=18%  Similarity=0.128  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A           10 EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6889999 76

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.1e-10  Score=50.71  Aligned_cols=34  Identities=18%  Similarity=0.145  Sum_probs=31.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A           10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999996  6889999 76

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.1e-10  Score=50.47  Aligned_cols=34  Identities=21%  Similarity=0.109  Sum_probs=31.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A           10 EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6889999 76

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.3e-10  Score=50.69  Aligned_cols=34  Identities=18%  Similarity=0.088  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A           10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4789999999999999999999996  6899998 76

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.8e-10  Score=50.85  Aligned_cols=34  Identities=18%  Similarity=0.101  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           10 EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            4789999999999999999999996  5789999 76

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.8e-10  Score=50.83  Aligned_cols=34  Identities=18%  Similarity=0.080  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A           10 EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999986  6889999 76

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.90  E-value=6.1e-10  Score=50.54  Aligned_cols=34  Identities=18%  Similarity=0.066  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A           10 VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999997  5889999 76

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6e-10  Score=50.51  Aligned_cols=34  Identities=15%  Similarity=0.120  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A           10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            4789999999999999999999996  6889999 76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.90  E-value=7.3e-10  Score=55.42  Aligned_cols=39  Identities=28%  Similarity=0.405  Sum_probs=35.6

Q ss_pred             CCccccCc--CCcCCCChhHHHHHHHh--cCCceEe-ecCcccC
Q 037234            1 MISSKRKK--CGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFK   39 (81)
Q Consensus         1 ~kp~~C~~--C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~   39 (81)
                      +++|.|..  |++.|.....|..|+++  +++||.| .|++.|.
T Consensus        36 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           36 QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            46899999  99999999999999996  6899999 9999884

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.1e-10  Score=50.48  Aligned_cols=34  Identities=18%  Similarity=0.097  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4789999999999999999999996  6889999 76

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.6e-10  Score=50.96  Aligned_cols=34  Identities=21%  Similarity=0.130  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A           10 GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999997  6889999 76

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=6.6e-10  Score=50.37  Aligned_cols=34  Identities=18%  Similarity=0.172  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A           10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999997  5889999 76

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=8.3e-10  Score=50.14  Aligned_cols=34  Identities=15%  Similarity=0.034  Sum_probs=30.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHH-h--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEK-N--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~-~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|++ +  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           10 KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            479999999999999999999999 6  5789998 76

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.1e-10  Score=50.26  Aligned_cols=34  Identities=18%  Similarity=0.136  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           10 EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999996  6889999 76

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.89  E-value=1.4e-09  Score=46.43  Aligned_cols=31  Identities=26%  Similarity=0.480  Sum_probs=27.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAA   57 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p   57 (81)
                      +++||.| .|++.|.....|..|+++| ++++|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~   35 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVH-TDTLS   35 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGG-TSCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHc-CCCCC
Confidence            4789999 9999999999999999999 78765

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=6.9e-10  Score=50.30  Aligned_cols=34  Identities=15%  Similarity=-0.003  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A           10 EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999996  6899998 76

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=1.5e-09  Score=47.16  Aligned_cols=33  Identities=21%  Similarity=0.481  Sum_probs=29.7

Q ss_pred             cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCC
Q 037234           26 CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALG   59 (81)
Q Consensus        26 ~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~   59 (81)
                      +++||.| .  |++.|...++|..|+++| ++++||.
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H-~~~k~~~   38 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH-EMTLKFG   38 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH-HTTTTTC
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHh-CCCCCCC
Confidence            4689999 7  999999999999999999 8999884

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7e-10  Score=50.23  Aligned_cols=34  Identities=21%  Similarity=0.207  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A           10 EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999997  6889999 76

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.88  E-value=6.2e-10  Score=50.45  Aligned_cols=34  Identities=21%  Similarity=0.155  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A           10 EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4789999999999999999999996  6889998 76

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.88  E-value=5.4e-10  Score=50.60  Aligned_cols=34  Identities=15%  Similarity=0.155  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A           10 VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999996  6889998 76

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.5e-10  Score=50.64  Aligned_cols=34  Identities=21%  Similarity=0.211  Sum_probs=31.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A           10 EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4789999999999999999999986  6899999 76

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.6e-10  Score=60.59  Aligned_cols=52  Identities=15%  Similarity=0.169  Sum_probs=44.4

Q ss_pred             CCCChhHHHHHHHh--cCCceEe-ecCcccC-ChhHHHHHHHHhcCC-CCCCCCCCcc
Q 037234           12 PFAVKGDWRTHEKN--CGRIWYC-VCGSDFK-HKRSLKDHIKAFGHG-HAALGIECFE   64 (81)
Q Consensus        12 ~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~-~~~~l~~H~~~~~~~-~~p~~~~~~~   64 (81)
                      .+.....+..|+++  ++++|.| .|++.|. ....|..|+++| ++ ++||.|+.+.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h-~~~~~~~~C~~C~   61 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVC-QKLQDALKCQHCR   61 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHH-HHHHHHHSCSSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHH-cCCCCCEECCCCC
Confidence            45555667788886  5789999 9999999 999999999999 77 8999998776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.4e-10  Score=49.96  Aligned_cols=34  Identities=15%  Similarity=0.117  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4789999999999999999999996  5889999 76

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.8e-10  Score=49.94  Aligned_cols=34  Identities=18%  Similarity=0.164  Sum_probs=30.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           10 EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6889998 65

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=6.4e-10  Score=50.47  Aligned_cols=34  Identities=18%  Similarity=0.238  Sum_probs=30.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A           10 TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999996  5889999 76

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=7.2e-10  Score=50.18  Aligned_cols=34  Identities=21%  Similarity=0.191  Sum_probs=30.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A           10 EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999986  6889999 76

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.4e-09  Score=47.33  Aligned_cols=29  Identities=24%  Similarity=0.468  Sum_probs=26.3

Q ss_pred             cCCceEe-e--cCcccCChhHHHHHHHHhcCCC
Q 037234           26 CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        26 ~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +++||.| .  |+++|...++|..|+++| +++
T Consensus         6 gekp~~C~~~~C~k~F~~~~~L~~H~r~H-tg~   37 (38)
T 2eln_A            6 SGILLKCPTDGCDYSTPDKYKLQAHLKVH-TAL   37 (38)
T ss_dssp             CCCCEECSSSSCCCEESCHHHHHHHHHHH-SCC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhc-CCC
Confidence            5789999 7  999999999999999999 775

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=5.4e-10  Score=50.66  Aligned_cols=34  Identities=24%  Similarity=0.167  Sum_probs=30.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           10 EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999996  5889998 76

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.6e-10  Score=50.60  Aligned_cols=34  Identities=26%  Similarity=0.164  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A           10 EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            4789999999999999999999996  5889999 76

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.6e-10  Score=50.37  Aligned_cols=34  Identities=18%  Similarity=0.153  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A           10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6899999 76

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.86  E-value=6.7e-10  Score=50.30  Aligned_cols=34  Identities=18%  Similarity=0.090  Sum_probs=30.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A           10 EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4799999999999999999999986  5889998 76

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.3e-10  Score=50.02  Aligned_cols=34  Identities=15%  Similarity=0.038  Sum_probs=30.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           10 EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999996  5789999 76

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=8.5e-10  Score=55.49  Aligned_cols=53  Identities=19%  Similarity=0.323  Sum_probs=45.5

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh-cCCceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN-CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~-~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      ++|+.|..|++.|. ...|..|+.. +.+|+.| .|++.|. +..|..|++++ .+++
T Consensus        15 ~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c-~~~~   69 (75)
T 2d9k_A           15 LRLAVCQHCDLELS-ILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEVC-GREG   69 (75)
T ss_dssp             CCCEECSSSCCEEC-HHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHHB-TTBS
T ss_pred             CcccCCcccChHhh-HHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHHc-cCCc
Confidence            47899999999995 8889999953 6899999 9999877 58999999998 6653

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.83  E-value=5.6e-09  Score=56.70  Aligned_cols=52  Identities=15%  Similarity=0.149  Sum_probs=43.8

Q ss_pred             cCCCChhHHHHHHHh-cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           11 KPFAVKGDWRTHEKN-CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        11 k~f~~~~~l~~h~~~-~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      +.|.....|..|++. +++||.| .|++.|.....|..|+++|   ++||.|+.+..
T Consensus        55 ~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H---~~~~~C~~C~k  108 (129)
T 2wbt_A           55 QLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT---EHTKVCPVCKK  108 (129)
T ss_dssp             GGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT---CCCCBCTTTCC
T ss_pred             cccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC---CCCCCCCCCCc
Confidence            344577788888874 7899999 9999999999999999987   78999987654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.83  E-value=2.3e-09  Score=52.58  Aligned_cols=39  Identities=15%  Similarity=0.195  Sum_probs=35.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++++|.| .|++.|.....|..|+++| .+++||.|..+..
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C~~   45 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIH-CTDRPFKCNYCSF   45 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGG-CCSCSEECSSSSC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHc-CCCCCEeCCCCCC
Confidence            4789999 9999999999999999999 8999999987653

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.83  E-value=3.1e-09  Score=52.46  Aligned_cols=39  Identities=18%  Similarity=0.334  Sum_probs=35.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      +++||.| .|++.|.....|..|+++| .+++||.|..+..
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h-~~~~~~~C~~C~~   50 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILVQHQRVH-TGEKPYKCLECGK   50 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGG-GCSCCEECSSSCC
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHhc-CCCCCeECCCCCc
Confidence            5789999 9999999999999999999 8999999987653

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9e-10  Score=49.91  Aligned_cols=34  Identities=18%  Similarity=0.188  Sum_probs=30.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999986  6889999 76

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.2e-09  Score=49.45  Aligned_cols=34  Identities=21%  Similarity=0.177  Sum_probs=30.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| +|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A           10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999996  6789988 54

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.6e-09  Score=48.14  Aligned_cols=36  Identities=22%  Similarity=0.433  Sum_probs=32.2

Q ss_pred             cCCceEe---ecCcccCChhHHHHHHHHhcCCCCCCCCCC
Q 037234           26 CGRIWYC---VCGSDFKHKRSLKDHIKAFGHGHAALGIEC   62 (81)
Q Consensus        26 ~~~p~~C---~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~   62 (81)
                      +++||.|   .|++.|.....|..|+++| ++++||.|+.
T Consensus         9 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   47 (48)
T 2ent_A            9 GEKPFACTWPGCGWRFSRSDELSRHRRSH-SGVKPSGPSS   47 (48)
T ss_dssp             CCCCEECCSSSCCCEESSHHHHHHHHTTS-CCCCSCSSCC
T ss_pred             CCCCeECCCCCCCCccCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            5789999   4999999999999999999 8999999864

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=5.6e-10  Score=50.62  Aligned_cols=34  Identities=15%  Similarity=0.106  Sum_probs=30.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           10 EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4789999999999999999999986  6889999 76

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.81  E-value=2.1e-09  Score=51.15  Aligned_cols=37  Identities=22%  Similarity=0.459  Sum_probs=33.7

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      +||.| .|++.|.....|..|+++| ++++||.|..+..
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   38 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSH-TNEKPYPCGLCNR   38 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTT-TSSCSEECTTTCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHh-CCCCCccCCCCCC
Confidence            58999 9999999999999999999 8999999977653

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2e-09  Score=48.77  Aligned_cols=34  Identities=21%  Similarity=0.093  Sum_probs=30.4

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A           10 EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789999999999999999999996  6889988 54

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.9e-09  Score=46.71  Aligned_cols=32  Identities=13%  Similarity=0.047  Sum_probs=28.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            8 EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4799999999999999999999997  5788876

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.80  E-value=3.7e-09  Score=52.37  Aligned_cols=39  Identities=18%  Similarity=0.388  Sum_probs=35.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      +.++|.| .|++.|.....|..|+++| .+++||.|..+..
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~~~C~~C~k   53 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVH-TGEKPYRCNICGA   53 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHH-CCCCSEECTTTCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHc-CCCCCEECCCCCc
Confidence            5789999 9999999999999999999 8999999987653

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.79  E-value=2.9e-09  Score=47.17  Aligned_cols=32  Identities=19%  Similarity=0.281  Sum_probs=28.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus         9 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            9 ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            4789999999999999999999996  6788876

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.79  E-value=6.1e-11  Score=50.15  Aligned_cols=31  Identities=32%  Similarity=0.536  Sum_probs=25.6

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCCCCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALG   59 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~   59 (81)
                      +||.| .|++.|...++|..|+++| ++++||+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H-~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTA-FIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSS-SSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHH-ccCCCCC
Confidence            47888 8888888888888888888 8888873

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.77  E-value=5.4e-10  Score=54.08  Aligned_cols=34  Identities=15%  Similarity=0.182  Sum_probs=18.0

Q ss_pred             CCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCcc
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFE   64 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~   64 (81)
                      ++||.| .|++.|.....|.   ++| ++++||.|..+.
T Consensus        12 ~k~~~C~~C~k~F~~~~~l~---~~H-~~~k~~~C~~C~   46 (62)
T 1vd4_A           12 RASFKCPVCSSTFTDLEANQ---LFD-PMTGTFRCTFCH   46 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH---HEE-TTTTEEBCSSSC
T ss_pred             CCCccCCCCCchhccHHHhH---hhc-CCCCCEECCCCC
Confidence            455555 5555555555443   444 555555555444

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=7.5e-09  Score=44.23  Aligned_cols=30  Identities=23%  Similarity=0.510  Sum_probs=26.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +++||.| .|++.|.....|..|+++| ++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H-~~~k   36 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKH-TGEK   36 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHH-TCCC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHc-cCCC
Confidence            4789999 9999999999999999999 7764

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5.8e-09  Score=46.76  Aligned_cols=32  Identities=19%  Similarity=0.104  Sum_probs=28.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A           10 KTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            4789999999999999999999996  5788876

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=5e-09  Score=47.41  Aligned_cols=32  Identities=22%  Similarity=0.198  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A           10 KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4799999999999999999999997  5788877

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5.6e-09  Score=47.27  Aligned_cols=32  Identities=16%  Similarity=0.161  Sum_probs=29.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A           10 ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            4799999999999999999999996  6889987

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=5.1e-09  Score=47.32  Aligned_cols=32  Identities=19%  Similarity=0.118  Sum_probs=29.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A           10 EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            4789999999999999999999986  5789988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.76  E-value=3.8e-09  Score=46.80  Aligned_cols=32  Identities=19%  Similarity=0.205  Sum_probs=28.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            8 ENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            4789999999999999999999996  5788876

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.76  E-value=5.3e-09  Score=49.16  Aligned_cols=36  Identities=22%  Similarity=0.374  Sum_probs=32.9

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ||.| .|++.|.....|..|+++| .+++||.|+.+..
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   37 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTH-TDVRPYHCTYCNF   37 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHT-SSCCCEECSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhc-CCCCCccCCCCCc
Confidence            6899 9999999999999999999 8999999987653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=8.3e-09  Score=44.19  Aligned_cols=30  Identities=23%  Similarity=0.540  Sum_probs=26.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +++||.| .|++.|.....|..|+++| ++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H-~~~k   36 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLKAHMNRH-STEK   36 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHHHHHHHS-STTC
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHHh-ccCC
Confidence            4789999 9999999999999999998 7654

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.75  E-value=5.9e-09  Score=46.59  Aligned_cols=32  Identities=9%  Similarity=0.052  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            8 NGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             CCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            4789999999999999999999996  6789887

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.75  E-value=7.2e-09  Score=42.25  Aligned_cols=29  Identities=21%  Similarity=0.492  Sum_probs=22.4

Q ss_pred             CCceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      ++||.| .|++.|.....|..|+++| ++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h-~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETH-DTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTT-CCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHh-ccCC
Confidence            367888 8888888888888888887 6653

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=2.9e-09  Score=47.02  Aligned_cols=32  Identities=25%  Similarity=0.285  Sum_probs=28.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4799999999999999999999986  5788876

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.7e-09  Score=47.31  Aligned_cols=32  Identities=19%  Similarity=0.103  Sum_probs=28.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            9 EKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             SCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            4799999999999999999999986  6888876

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=6.4e-09  Score=47.02  Aligned_cols=32  Identities=16%  Similarity=0.096  Sum_probs=29.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A           10 KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4789999999999999999999996  6889988

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.5e-09  Score=47.56  Aligned_cols=32  Identities=19%  Similarity=0.198  Sum_probs=29.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A           10 QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             SSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            4789999999999999999999996  6889988

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=1e-08  Score=43.91  Aligned_cols=30  Identities=33%  Similarity=0.740  Sum_probs=26.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +++||.| .|++.|.....|..|+++| ++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H-~~~k   36 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIH-TNEK   36 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHH-CCCC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHh-CCCC
Confidence            4689999 9999999999999999999 7764

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=6.7e-09  Score=46.85  Aligned_cols=32  Identities=19%  Similarity=0.176  Sum_probs=29.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A           10 EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999996  5789987

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=5.5e-09  Score=47.20  Aligned_cols=32  Identities=25%  Similarity=0.132  Sum_probs=29.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A           10 ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999996  5789987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.2e-09  Score=47.10  Aligned_cols=32  Identities=13%  Similarity=0.039  Sum_probs=28.6

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            9 EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            4799999999999999999999986  5788876

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=6e-09  Score=47.07  Aligned_cols=32  Identities=16%  Similarity=0.179  Sum_probs=29.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A           10 GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4789999999999999999999986  5789988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=7.5e-09  Score=46.79  Aligned_cols=32  Identities=19%  Similarity=0.136  Sum_probs=29.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A           10 ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4799999999999999999999996  6889987

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=9.1e-09  Score=43.95  Aligned_cols=30  Identities=33%  Similarity=0.698  Sum_probs=26.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      ++++|.| .|++.|.....|..|+++| ++++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~ek   36 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHKLLH-TADG   36 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHHHHH-SSCC
T ss_pred             CCCCeecCcCCCCcCchHHHHHHHHHh-cCCC
Confidence            4688999 9999999999999999998 7764

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.2e-09  Score=46.49  Aligned_cols=32  Identities=22%  Similarity=0.186  Sum_probs=28.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A           10 MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            4789999999999999999999986  5788876

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=5.2e-09  Score=47.33  Aligned_cols=32  Identities=13%  Similarity=0.087  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A           10 EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4799999999999999999999997  5789987

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.1e-09  Score=47.10  Aligned_cols=32  Identities=22%  Similarity=0.216  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A           10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4789999999999999999999986  5789987

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=6.8e-09  Score=44.47  Aligned_cols=30  Identities=20%  Similarity=0.503  Sum_probs=26.2

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +++||.| .|++.|.....|..|+++| ++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H-~~~k   36 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVH-GDKW   36 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTT-STTC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHh-cCCC
Confidence            4689999 9999999999999999998 7654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=5.3e-09  Score=47.27  Aligned_cols=32  Identities=19%  Similarity=0.132  Sum_probs=29.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A           10 EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            4789999999999999999999986  5788887

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=4.7e-09  Score=52.44  Aligned_cols=38  Identities=21%  Similarity=0.276  Sum_probs=34.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCC---CCCCCCCCcc
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHG---HAALGIECFE   64 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~---~~p~~~~~~~   64 (81)
                      +++||.| .|++.|.....|..|+++| .+   +++|.|..+.
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h-~~~~~~~~~~C~~C~   45 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKH-AETVAALRFPCEFCG   45 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHH-HHHTTTCCEECTTTC
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHh-hccCCCcccCCCCCC
Confidence            5789999 9999999999999999999 65   8999987765

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.7e-09  Score=46.82  Aligned_cols=32  Identities=22%  Similarity=0.249  Sum_probs=28.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4799999999999999999999986  5788876

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6e-09  Score=47.08  Aligned_cols=32  Identities=22%  Similarity=0.184  Sum_probs=29.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A           10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999996  6889988

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=5.4e-09  Score=46.79  Aligned_cols=32  Identities=19%  Similarity=0.120  Sum_probs=28.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A           10 ENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            4799999999999999999999997  5788876

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.71  E-value=5.2e-09  Score=47.33  Aligned_cols=32  Identities=19%  Similarity=0.244  Sum_probs=29.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A           10 EKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4799999999999999999999996  6789987

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.71  E-value=1.1e-08  Score=41.42  Aligned_cols=27  Identities=30%  Similarity=0.685  Sum_probs=20.3

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +||.| .|++.|.....|..|+++| +++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h-~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSH-TNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHH-SCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHh-cCC
Confidence            36777 7888888888888888777 554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=6.9e-09  Score=46.92  Aligned_cols=32  Identities=16%  Similarity=0.208  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A           10 EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            4789999999999999999999986  5789987

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.5e-09  Score=47.55  Aligned_cols=32  Identities=22%  Similarity=0.181  Sum_probs=29.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A           10 ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             CCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4799999999999999999999996  5789987

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=5.9e-09  Score=47.11  Aligned_cols=32  Identities=19%  Similarity=0.176  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A           10 ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            4789999999999999999999996  5789987

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=6e-09  Score=47.02  Aligned_cols=32  Identities=16%  Similarity=0.158  Sum_probs=29.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A           10 EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999996  5789988

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=7.2e-09  Score=46.80  Aligned_cols=32  Identities=22%  Similarity=0.214  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A           10 EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             CCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999996  5789987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.71  E-value=1e-09  Score=54.85  Aligned_cols=44  Identities=16%  Similarity=0.371  Sum_probs=36.1

Q ss_pred             HHHHh--cCCceEe-ecCcccCChhHHHHHHH-HhcCCC-CCCCCCCccC
Q 037234           21 THEKN--CGRIWYC-VCGSDFKHKRSLKDHIK-AFGHGH-AALGIECFEE   65 (81)
Q Consensus        21 ~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~-~~~~~~-~p~~~~~~~~   65 (81)
                      +|+++  +++||.| .|++.|.....|..|++ .| .++ ++|.|..+..
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h-~~~~~~~~C~~C~~   53 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH-TENVAKFHCPHCDT   53 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHS-SSSCSSEECSSSSC
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhc-CCCCCccCCCCCCC
Confidence            45554  5899999 99999999999999998 56 664 8999987763

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.71  E-value=9.7e-09  Score=41.85  Aligned_cols=28  Identities=29%  Similarity=0.539  Sum_probs=20.5

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +||.| .|++.|...+.|..|+++| ++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h-~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTK-HSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHH-TSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHH-ccCC
Confidence            36777 7777777777787787777 5654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.70  E-value=1.1e-08  Score=49.43  Aligned_cols=40  Identities=13%  Similarity=0.194  Sum_probs=34.8

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhc-CCCCCCCCCCccC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFG-HGHAALGIECFEE   65 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~-~~~~p~~~~~~~~   65 (81)
                      +++||.| .|++.|.....|..|+++++ .+++||.|+.+..
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k   48 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFK   48 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCC
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCC
Confidence            5789999 99999999999999999842 4889999987654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.70  E-value=7.3e-09  Score=42.07  Aligned_cols=28  Identities=21%  Similarity=0.362  Sum_probs=21.8

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +||.| .|++.|.....|..|+++| ++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H-~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLH-ENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGG-GSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHh-cCCC
Confidence            47888 8888888888888888887 6653

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=5.2e-09  Score=47.38  Aligned_cols=32  Identities=25%  Similarity=0.189  Sum_probs=29.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A           10 EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            4799999999999999999999986  5788887

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=6.1e-09  Score=47.00  Aligned_cols=32  Identities=19%  Similarity=0.230  Sum_probs=29.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A           10 EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CCCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            4789999999999999999999996  6889987

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=5.8e-09  Score=46.66  Aligned_cols=32  Identities=22%  Similarity=0.175  Sum_probs=28.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A           10 ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            4799999999999999999999996  5788876

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=6.9e-09  Score=46.34  Aligned_cols=32  Identities=16%  Similarity=0.170  Sum_probs=28.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A           10 EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999996  5788876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=1.3e-08  Score=50.74  Aligned_cols=32  Identities=9%  Similarity=0.088  Sum_probs=28.4

Q ss_pred             CCccccCc--CCcCCCChhHHHHHH-Hh--cCCceEe
Q 037234            1 MISSKRKK--CGKPFAVKGDWRTHE-KN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~--C~k~f~~~~~l~~h~-~~--~~~p~~C   32 (81)
                      +|||+|..  |++.|....+|..|+ ++  +++|+.|
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            58999975  999999999999998 45  6899987

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.69  E-value=1e-08  Score=41.47  Aligned_cols=28  Identities=29%  Similarity=0.631  Sum_probs=22.2

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +||.| .|++.|.....|..|+++| ++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H-~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIH-SGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHH-HTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHh-cCCC
Confidence            47888 8888888888888888888 6653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.69  E-value=7.4e-09  Score=51.62  Aligned_cols=39  Identities=23%  Similarity=0.490  Sum_probs=35.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++++|.| .|++.|.....|..|+++| .+++||.|..+..
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   54 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTH-TGEKPYKCDECGK   54 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTT-CCSCSEECSSSCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHc-CCCcCeeCCCCCC
Confidence            4789999 9999999999999999999 8999999987653

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=6.9e-09  Score=46.82  Aligned_cols=32  Identities=16%  Similarity=0.191  Sum_probs=29.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A           10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            4789999999999999999999996  6889987

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.69  E-value=5.1e-09  Score=54.19  Aligned_cols=41  Identities=15%  Similarity=0.284  Sum_probs=34.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEEDD   67 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~~~   67 (81)
                      +++||.| .|++.|.....|..|+++| ++++||.|..++.-.
T Consensus        22 ~~kpy~C~~C~k~F~~~~~L~~H~~~H-t~ekp~~C~~~~~~~   63 (88)
T 1x6f_A           22 QNSTYQCKHCDSKLQSTAELTSHLNIH-NEEFQKRAKRQERRK   63 (88)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHH-HHHHHHHCCCCSCCC
T ss_pred             CCCCCcCCCCCCEeCCHHHHHHHHHHh-CCCCCcccchhhhHH
Confidence            5789999 9999999999999999998 888899887766433

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.2e-08  Score=43.99  Aligned_cols=30  Identities=33%  Similarity=0.554  Sum_probs=26.3

Q ss_pred             cCCceEe-ecCcccCCh-hHHHHHHHHhcCCCC
Q 037234           26 CGRIWYC-VCGSDFKHK-RSLKDHIKAFGHGHA   56 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~-~~l~~H~~~~~~~~~   56 (81)
                      +++||.| .|++.|... ..|..|+++| ++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~~L~~H~~~H-~~~k   37 (37)
T 2elp_A            6 SGRAMKCPYCDFYFMKNGSDLQRHIWAH-EGVK   37 (37)
T ss_dssp             CCCCEECSSSSCEECSSCHHHHHHHHHH-HTCC
T ss_pred             CCCCeECCCCChhhccCHHHHHHHHHhc-CCCC
Confidence            4789999 999999999 9999999998 6653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.68  E-value=3.1e-09  Score=46.49  Aligned_cols=23  Identities=26%  Similarity=0.556  Sum_probs=17.3

Q ss_pred             cCCceEe-ecCcccCChhHHHHHH
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHI   48 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~   48 (81)
                      +++||.| .|+++|.+.++|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            4677777 7777777777777776

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=6.1e-09  Score=47.01  Aligned_cols=32  Identities=19%  Similarity=0.159  Sum_probs=29.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A           10 EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            4789999999999999999999996  5789988

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=2.7e-10  Score=59.05  Aligned_cols=49  Identities=12%  Similarity=0.069  Sum_probs=39.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCC
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHG   54 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~   54 (81)
                      ++||.|..|++.|.....|..|+++  +++||.| .|.    ....|..|+++| .|
T Consensus        23 ~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~-~~   74 (88)
T 1x6f_A           23 NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYA-DG   74 (88)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCC-CC
T ss_pred             CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccc-cc
Confidence            4789999999999999999999996  5789998 654    445666677766 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5.3e-09  Score=47.10  Aligned_cols=32  Identities=25%  Similarity=0.344  Sum_probs=29.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A           10 QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999996  5788887

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=6e-09  Score=47.12  Aligned_cols=32  Identities=25%  Similarity=0.268  Sum_probs=29.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A           10 EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            4799999999999999999999996  6788877

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6.4e-09  Score=47.04  Aligned_cols=32  Identities=16%  Similarity=0.160  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A           10 EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999996  6789987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6.9e-09  Score=47.17  Aligned_cols=34  Identities=12%  Similarity=0.031  Sum_probs=30.6

Q ss_pred             CCccccC--cCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRK--KCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~--~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      ++||.|.  .|++.|.....|..|+++  +++||.| .|
T Consensus        10 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4789998  899999999999999996  5889999 76

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.67  E-value=4.2e-09  Score=45.38  Aligned_cols=29  Identities=21%  Similarity=0.246  Sum_probs=25.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +++||.| .|++.|.....|..|+++| +++
T Consensus         8 ~~k~~~C~~C~k~f~~~~~l~~H~~~H-~~~   37 (37)
T 1p7a_A            8 GIKPFQCPDCDRSFSRSDHLALHRKRH-MLV   37 (37)
T ss_dssp             CSSSBCCTTTCCCBSSHHHHHHHHGGG-TCC
T ss_pred             CCCCccCCCCCcccCcHHHHHHHHHHh-ccC
Confidence            5789999 9999999999999999988 653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.67  E-value=2e-08  Score=42.42  Aligned_cols=30  Identities=13%  Similarity=-0.046  Sum_probs=26.6

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCceE
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIWY   31 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~   31 (81)
                      +||.|..|++.|.....|..|+++  +++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            689999999999999999999996  567763

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.2e-09  Score=46.75  Aligned_cols=32  Identities=22%  Similarity=0.252  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A           10 EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            4789999999999999999999986  5789987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.7e-09  Score=46.47  Aligned_cols=32  Identities=22%  Similarity=0.263  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A           10 EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999996  5789987

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.66  E-value=1.3e-08  Score=46.71  Aligned_cols=31  Identities=19%  Similarity=0.542  Sum_probs=25.6

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHH-HhcCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIK-AFGHGHAA   57 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~-~~~~~~~p   57 (81)
                      +++||.| .|++.|....+|..|++ +| +++.+
T Consensus         4 ~~kp~~C~~C~k~F~~~~~L~~H~~~~H-~~e~~   36 (48)
T 3iuf_A            4 RDKPYACDICGKRYKNRPGLSYHYAHSH-LAEEE   36 (48)
T ss_dssp             TTSCEECTTTCCEESSHHHHHHHHHHSS-CC---
T ss_pred             CCcCEECCCcCcccCCHHHHHHHhhhhc-CCCCC
Confidence            5789999 99999999999999999 88 66543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7.6e-09  Score=46.72  Aligned_cols=32  Identities=16%  Similarity=0.039  Sum_probs=29.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A           10 EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            4799999999999999999999986  6889877

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.65  E-value=1.1e-08  Score=41.37  Aligned_cols=27  Identities=26%  Similarity=0.528  Sum_probs=18.1

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +||.| .|++.|.....|..|+++| +++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h-~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIH-IAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHH-HSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHh-ccC
Confidence            35667 7777777777777777766 554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=6.8e-09  Score=46.45  Aligned_cols=32  Identities=16%  Similarity=0.141  Sum_probs=28.5

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A           10 RKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            4789999999999999999999996  5788866

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.63  E-value=2.5e-08  Score=39.91  Aligned_cols=24  Identities=13%  Similarity=0.531  Sum_probs=16.6

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +||.| .|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            56677 7777777777777776665

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.6e-08  Score=45.30  Aligned_cols=32  Identities=22%  Similarity=0.139  Sum_probs=28.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A           10 EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            4799999999999999999999996  5778754

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=8.7e-09  Score=46.57  Aligned_cols=32  Identities=22%  Similarity=0.143  Sum_probs=28.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--c-CCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--C-GRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~-~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  + ++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A           10 EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             SCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            4789999999999999999999996  5 788877

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=5.2e-09  Score=46.87  Aligned_cols=32  Identities=22%  Similarity=0.105  Sum_probs=28.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      ++||.|..|++.|.....|..|+++  +++||.|
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A           10 SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4789999999999999999999996  5788876

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.62  E-value=2.6e-08  Score=43.01  Aligned_cols=30  Identities=20%  Similarity=0.555  Sum_probs=26.1

Q ss_pred             cCCceEe-e--cCcccCChhHHHHHHHHhcCCCC
Q 037234           26 CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        26 ~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +++||.| .  |++.|...+.|..|+++| ++++
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H-~~ek   37 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWH-TGER   37 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHH-HTTC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhc-CCCC
Confidence            5789999 6  999999999999999998 7764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.62  E-value=1.8e-08  Score=40.64  Aligned_cols=24  Identities=33%  Similarity=0.809  Sum_probs=16.9

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +||.| .|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhc
Confidence            56777 7777777777777777665

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.05  E-value=4e-09  Score=42.99  Aligned_cols=27  Identities=30%  Similarity=0.717  Sum_probs=20.8

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +||.| .|++.|...++|..|+++| +++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H-~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQH-TGE   28 (29)
Confidence            46778 8888888888888888877 554

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.61  E-value=6.1e-09  Score=52.62  Aligned_cols=45  Identities=22%  Similarity=0.392  Sum_probs=36.9

Q ss_pred             HHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCC----CCCCCCCcc
Q 037234           19 WRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGH----AALGIECFE   64 (81)
Q Consensus        19 l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~----~p~~~~~~~   64 (81)
                      +.+|+++  +++||.| .|++.|.....|..|++.+ ++.    ++|.|+.+.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~-~~~~~~~~~~~C~~C~   54 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRY-HDPNFVPAAFVCSKCG   54 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHT-TCSSCCCCCEECSSSC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHh-cCCcCCCcceECCCCC
Confidence            3456665  5789999 9999999999999999988 444    789887765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=5.2e-09  Score=42.81  Aligned_cols=27  Identities=22%  Similarity=0.656  Sum_probs=20.2

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +||.| .|++.|.....|..|+++| +++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h-~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIH-TGE   29 (30)
Confidence            57777 7888888777787787777 554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=3.1e-08  Score=48.76  Aligned_cols=31  Identities=23%  Similarity=0.405  Sum_probs=27.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAA   57 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p   57 (81)
                      .++||.| .|++.|....+|..|+++| +++..
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~H-tg~~~   41 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQH-GVTSL   41 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHH-TTTSC
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhh-CCCcc
Confidence            4789999 9999999999999999999 77643

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.59  E-value=2e-08  Score=40.35  Aligned_cols=24  Identities=17%  Similarity=0.523  Sum_probs=16.1

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +||.| .|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            56667 6777777776776666654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.58  E-value=3.8e-08  Score=52.22  Aligned_cols=40  Identities=8%  Similarity=-0.007  Sum_probs=34.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHH-hc--CCCCCCCCCCccC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKA-FG--HGHAALGIECFEE   65 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~-~~--~~~~p~~~~~~~~   65 (81)
                      +++||.| .|++.|...+.|..|++. |.  .+++||.|+.+..
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk   58 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNF   58 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCc
Confidence            7899999 999999999999999985 61  3588999987753

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.57  E-value=5.9e-08  Score=42.30  Aligned_cols=23  Identities=17%  Similarity=0.273  Sum_probs=22.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHH
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHE   23 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~   23 (81)
                      ++||.|..|++.|...++|..|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            68999999999999999999998

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=4.1e-08  Score=42.34  Aligned_cols=29  Identities=31%  Similarity=0.632  Sum_probs=25.3

Q ss_pred             cCCceEe-ecCcccCChhHHHHH-HHHhcCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDH-IKAFGHGH   55 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H-~~~~~~~~   55 (81)
                      +++||.| .|++.|...+.|..| +++| +++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H-~~~   36 (37)
T 2elm_A            6 SGHLYYCSQCHYSSITKNCLKRHVIQKH-SNI   36 (37)
T ss_dssp             SSCEEECSSSSCEEECHHHHHHHHHHHT-CCC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHHc-cCc
Confidence            5789999 999999999999999 8888 654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.55  E-value=2e-08  Score=43.82  Aligned_cols=31  Identities=16%  Similarity=0.072  Sum_probs=27.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceE
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWY   31 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~   31 (81)
                      ++||.|..|++.|.....|..|+++  +++||.
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            4799999999999999999999996  567764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.55  E-value=5.2e-08  Score=47.89  Aligned_cols=39  Identities=23%  Similarity=0.439  Sum_probs=35.3

Q ss_pred             cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           26 CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        26 ~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++++|.| .  |++.|.....|..|+++| .+++||.|..+..
T Consensus        16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h-~~~~~~~C~~C~~   57 (73)
T 1f2i_G           16 KMRPYACPVESCDRRFSRSDELTRHIRIH-TGQKPFQCRICMR   57 (73)
T ss_dssp             CCCCEECSSTTBCCEESSHHHHHHHHHHH-HCCCCEECTTTCC
T ss_pred             CCCccCCcCCCCCCccCCHHHHHHHHHhh-CCCCCeECCCCCc
Confidence            5789999 6  999999999999999999 8999999987653

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.53  E-value=2.8e-08  Score=39.62  Aligned_cols=23  Identities=26%  Similarity=0.660  Sum_probs=14.9

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHh
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ||.| .|++.|.....|..|+++|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHc
Confidence            4566 6666666666666666666

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.48  E-value=3.4e-09  Score=51.19  Aligned_cols=41  Identities=17%  Similarity=0.242  Sum_probs=35.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHH
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSL   44 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l   44 (81)
                      ++||.|..|++.|.....|.   ++  +++||.| .|++.|....++
T Consensus        12 ~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A           12 RASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             CCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            47999999999999988876   43  6899999 999999887664

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.48  E-value=1.1e-07  Score=46.60  Aligned_cols=35  Identities=23%  Similarity=0.459  Sum_probs=32.5

Q ss_pred             cCCceEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           26 CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        26 ~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      ..++|.| .  |++.|.....|..|+++| ++++||.|.
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   51 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTH-TGEKPFSCS   51 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHH-SSSCSEECC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhc-CCCCCccCC
Confidence            3679999 8  999999999999999999 999999995

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.47  E-value=3.4e-08  Score=40.27  Aligned_cols=26  Identities=27%  Similarity=0.634  Sum_probs=16.0

Q ss_pred             ceEe-ecCcccCChhHHHHH-HHHhcCCC
Q 037234           29 IWYC-VCGSDFKHKRSLKDH-IKAFGHGH   55 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H-~~~~~~~~   55 (81)
                      ||.| .|++.|...+.|..| +++| +++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H-~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIH-SGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTS-CCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHc-cCC
Confidence            5666 666666666666666 4555 444

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.44  E-value=1.4e-07  Score=39.08  Aligned_cols=23  Identities=26%  Similarity=0.361  Sum_probs=11.9

Q ss_pred             CccccC--cCCcCCCChhHHHHHHH
Q 037234            2 ISSKRK--KCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         2 kp~~C~--~C~k~f~~~~~l~~h~~   24 (81)
                      +||.|.  .|++.|.....|..|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~   26 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHH
Confidence            455555  45555555555555544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.44  E-value=1.3e-07  Score=37.75  Aligned_cols=25  Identities=8%  Similarity=-0.055  Sum_probs=23.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHH
Confidence            5899999999999999999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.2e-07  Score=45.90  Aligned_cols=37  Identities=14%  Similarity=0.184  Sum_probs=32.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCC-CccC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIE-CFEE   65 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~-~~~~   65 (81)
                      +.+||.| .|++.|. ...|..|+++  ++++||.|+ .+..
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~--~~~~p~~C~~~C~k   45 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ--CPRLPVACPNQCGV   45 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH--CSSSEEECTTCCSC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH--cCCcCccCCcccCc
Confidence            4689999 9999999 9999999997  699999998 5553

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.42  E-value=1.8e-07  Score=39.38  Aligned_cols=25  Identities=20%  Similarity=0.167  Sum_probs=23.4

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~   29 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHIRE   29 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCeECCCCcchhCCHHHHHHHHHH
Confidence            4799999999999999999999986

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.41  E-value=1.4e-07  Score=42.88  Aligned_cols=30  Identities=20%  Similarity=0.554  Sum_probs=27.0

Q ss_pred             cCCceEe-e--cCcccCChhHHHHHHHHhcCCCC
Q 037234           26 CGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        26 ~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +++||.| .  |++.|...++|..|+++| ++++
T Consensus        15 ~~k~~~C~~~~C~k~F~~~~~L~~H~~~H-~~ek   47 (47)
T 1ncs_A           15 PDKTFECLFPGCTKTFKRRYNIRSHIQTH-LEDR   47 (47)
T ss_dssp             TTTEEECCCTTCCCEECSSSSHHHHHHHH-TTTC
T ss_pred             CCCCeECCCCCCCCccCCHHHHHHHHHHc-cCCC
Confidence            6899999 5  999999999999999999 7764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.78  E-value=3.2e-08  Score=39.25  Aligned_cols=24  Identities=29%  Similarity=0.760  Sum_probs=16.0

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +||.| .|++.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            35666 6777777776776666655

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=2e-07  Score=39.85  Aligned_cols=25  Identities=24%  Similarity=0.207  Sum_probs=23.4

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~   31 (37)
T 2elo_A            7 GRSYSCPVCEKSFSEDRLIKSHIKT   31 (37)
T ss_dssp             CCCCEETTTTEECSSHHHHHHHHHH
T ss_pred             CCCcCCCCCCCccCCHHHHHHHHHH
Confidence            4799999999999999999999986

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.39  E-value=9e-08  Score=38.34  Aligned_cols=25  Identities=8%  Similarity=0.121  Sum_probs=23.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTT
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHh
Confidence            5899999999999999999999874

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.39  E-value=1.5e-07  Score=38.75  Aligned_cols=18  Identities=28%  Similarity=0.702  Sum_probs=9.1

Q ss_pred             cCcccCChhHHHHHHHHh
Q 037234           34 CGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        34 C~~~f~~~~~l~~H~~~~   51 (81)
                      |++.|...+.|..|+++|
T Consensus        10 C~k~f~~~~~L~~H~~~H   27 (31)
T 1sp2_A           10 CGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTT
T ss_pred             CCcccCCHhHHHHHHHHh
Confidence            445555555555555554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.37  E-value=2.6e-07  Score=38.99  Aligned_cols=25  Identities=20%  Similarity=0.187  Sum_probs=23.5

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHH
Confidence            4799999999999999999999986

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.34  E-value=2.7e-07  Score=42.98  Aligned_cols=30  Identities=10%  Similarity=-0.005  Sum_probs=26.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCce
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIW   30 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~   30 (81)
                      ++||.|..|++.|.....|..|+++  +++||
T Consensus        22 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A           22 EQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            4789999999999999999999996  57776

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=2.7e-07  Score=40.55  Aligned_cols=26  Identities=23%  Similarity=0.078  Sum_probs=23.7

Q ss_pred             CCccccCc--CCcCCCChhHHHHHHHhc
Q 037234            1 MISSKRKK--CGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         1 ~kp~~C~~--C~k~f~~~~~l~~h~~~~   26 (81)
                      ++||.|..  |++.|.....|..|++++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~H   34 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVH   34 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            58999986  999999999999999863

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.32  E-value=2.5e-07  Score=37.02  Aligned_cols=25  Identities=32%  Similarity=0.473  Sum_probs=23.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTT
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHh
Confidence            5899999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.27  E-value=1e-06  Score=35.44  Aligned_cols=24  Identities=21%  Similarity=0.191  Sum_probs=22.5

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      +||.|..|++.|.....|..|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~   24 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHH
Confidence            589999999999999999999986

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=5.5e-07  Score=38.66  Aligned_cols=30  Identities=13%  Similarity=0.197  Sum_probs=26.0

Q ss_pred             CCccccC--cCCcCCCChhHHHHHHHh--cCCce
Q 037234            1 MISSKRK--KCGKPFAVKGDWRTHEKN--CGRIW   30 (81)
Q Consensus         1 ~kp~~C~--~C~k~f~~~~~l~~h~~~--~~~p~   30 (81)
                      ++||.|.  .|++.|.....|..|+++  +++||
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5799999  599999999999999986  56665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=5.1e-07  Score=36.38  Aligned_cols=25  Identities=20%  Similarity=0.310  Sum_probs=23.5

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~   25 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLET   25 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHT
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHH
Confidence            5899999999999999999999986

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.25  E-value=2e-08  Score=42.03  Aligned_cols=29  Identities=17%  Similarity=0.102  Sum_probs=25.3

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCce
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIW   30 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~   30 (81)
                      +||.|..|++.|.....|..|+++  +++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            689999999999999999999986  45664

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.24  E-value=9.2e-07  Score=37.66  Aligned_cols=25  Identities=16%  Similarity=0.347  Sum_probs=23.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         9 ~k~~~C~~C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A            9 IKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             SSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCCccCCCCCcccCcHHHHHHHHHH
Confidence            4799999999999999999999985

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.23  E-value=1.1e-06  Score=35.09  Aligned_cols=24  Identities=29%  Similarity=0.440  Sum_probs=22.5

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      +||.|..|++.|.....|..|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHH
Confidence            689999999999999999999985

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=1e-06  Score=43.27  Aligned_cols=26  Identities=27%  Similarity=0.276  Sum_probs=24.2

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      ++||.|..|++.|.....|..|++++
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~H   36 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQH   36 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhh
Confidence            58999999999999999999999973

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.22  E-value=1.2e-06  Score=34.99  Aligned_cols=24  Identities=21%  Similarity=0.324  Sum_probs=22.6

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      +||.|..|++.|.....|..|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRS   24 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHHHH
Confidence            589999999999999999999986

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=1.3e-06  Score=36.84  Aligned_cols=25  Identities=28%  Similarity=0.430  Sum_probs=23.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHH
Confidence            4799999999999999999999986

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.51  E-value=1.8e-07  Score=36.91  Aligned_cols=24  Identities=21%  Similarity=0.421  Sum_probs=22.2

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      +||.|..|++.|.....|..|+++
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            689999999999999999999874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.18  E-value=1.5e-06  Score=35.78  Aligned_cols=29  Identities=28%  Similarity=0.532  Sum_probs=25.4

Q ss_pred             CCceEe-e--cCcccCChhHHHHHHHHhcCCCC
Q 037234           27 GRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        27 ~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      ++||.| .  |++.|...+.|..|+++| ++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H-~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH-QEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG-TCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHc-cCCC
Confidence            468999 4  999999999999999999 7764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=7.5e-07  Score=37.76  Aligned_cols=25  Identities=16%  Similarity=0.114  Sum_probs=23.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHH
Confidence            4799999999999999999999986

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=1.1e-06  Score=37.15  Aligned_cols=25  Identities=20%  Similarity=0.266  Sum_probs=23.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHH
Confidence            4799999999999999999999986

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=1.1e-06  Score=37.26  Aligned_cols=25  Identities=20%  Similarity=0.183  Sum_probs=23.4

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHH
Confidence            4799999999999999999999986

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.16  E-value=1.4e-06  Score=34.82  Aligned_cols=24  Identities=29%  Similarity=0.573  Sum_probs=22.5

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      +||.|..|++.|.....|..|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRI   24 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHH
Confidence            589999999999999999999986

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=1.2e-06  Score=37.12  Aligned_cols=26  Identities=15%  Similarity=0.109  Sum_probs=23.8

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      ++||.|..|++.|.....|..|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elq_A            7 GKPFKCSLCEYATRSKSNLKAHMNRH   32 (36)
T ss_dssp             CCSEECSSSSCEESCHHHHHHHHHHS
T ss_pred             CCCccCCCCCchhCCHHHHHHHHHHh
Confidence            47999999999999999999999863

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.14  E-value=8.6e-07  Score=35.54  Aligned_cols=24  Identities=17%  Similarity=0.109  Sum_probs=22.6

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      +||.|..|++.|.....|..|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILL   24 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHH
Confidence            689999999999999999999986

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.13  E-value=1.2e-06  Score=39.87  Aligned_cols=26  Identities=15%  Similarity=0.169  Sum_probs=24.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHH-hc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEK-NC   26 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~-~~   26 (81)
                      ++||.|..|++.|.....|..|++ ++
T Consensus         5 ~kp~~C~~C~k~F~~~~~L~~H~~~~H   31 (48)
T 3iuf_A            5 DKPYACDICGKRYKNRPGLSYHYAHSH   31 (48)
T ss_dssp             TSCEECTTTCCEESSHHHHHHHHHHSS
T ss_pred             CcCEECCCcCcccCCHHHHHHHhhhhc
Confidence            579999999999999999999999 63

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=9.6e-07  Score=37.83  Aligned_cols=26  Identities=12%  Similarity=-0.012  Sum_probs=23.3

Q ss_pred             CCccccCcCCcCCCChhHHHHH-HHhc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTH-EKNC   26 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h-~~~~   26 (81)
                      ++||.|..|++.|.....|..| ++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            7 GHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             SCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            4799999999999999999999 7753

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.5e-06  Score=37.01  Aligned_cols=25  Identities=20%  Similarity=0.108  Sum_probs=23.1

Q ss_pred             CCccccCcCCcCCCCh-hHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVK-GDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~-~~l~~h~~~   25 (81)
                      ++||.|..|++.|... ..|..|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCCeECCCCChhhccCHHHHHHHHHh
Confidence            4799999999999999 999999986

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.40  E-value=3.5e-07  Score=37.00  Aligned_cols=25  Identities=24%  Similarity=0.336  Sum_probs=23.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~   25 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRI   25 (30)
Confidence            5799999999999999999999885

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.11  E-value=2.7e-06  Score=34.72  Aligned_cols=25  Identities=20%  Similarity=0.377  Sum_probs=22.7

Q ss_pred             CccccC--cCCcCCCChhHHHHHHHhc
Q 037234            2 ISSKRK--KCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         2 kp~~C~--~C~k~f~~~~~l~~h~~~~   26 (81)
                      +||.|.  .|++.|.....|..|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H   27 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHh
Confidence            589998  9999999999999999863

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.09  E-value=2e-06  Score=33.83  Aligned_cols=24  Identities=21%  Similarity=0.343  Sum_probs=21.2

Q ss_pred             ccccCcCCcCCCChhHHHHHHHhc
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      ||.|..|++.|.....|..|++++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHc
Confidence            689999999999999999998863

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.04  E-value=3.3e-06  Score=43.13  Aligned_cols=29  Identities=17%  Similarity=0.090  Sum_probs=27.0

Q ss_pred             cccCcCCcCCCChhHHHHHHHh--cCCceEe
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      |.|..|++.|.....|..|+++  +++||.|
T Consensus        63 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             TTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            8999999999999999999996  6889987

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.30  E-value=6.3e-07  Score=36.08  Aligned_cols=24  Identities=21%  Similarity=0.387  Sum_probs=22.3

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      +||.|..|++.|.....|..|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQ   24 (29)
Confidence            589999999999999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.01  E-value=3.9e-06  Score=33.43  Aligned_cols=24  Identities=21%  Similarity=0.436  Sum_probs=14.6

Q ss_pred             CccccC--cCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRK--KCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~--~C~k~f~~~~~l~~h~~~   25 (81)
                      +||.|.  .|++.|.....|..|+++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~   26 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKI   26 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHH
Confidence            356666  666666666666666553

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=4.3e-08  Score=47.90  Aligned_cols=34  Identities=15%  Similarity=0.017  Sum_probs=30.4

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ec
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VC   34 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C   34 (81)
                      +++|.|..|++.|.....|..|+++  +++||.| .|
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            4789999999999999999999986  5789998 76

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.99  E-value=2.9e-06  Score=34.16  Aligned_cols=24  Identities=17%  Similarity=0.216  Sum_probs=21.7

Q ss_pred             CccccCcCCcCCCChhHHHHH-HHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTH-EKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h-~~~   25 (81)
                      +||.|..|++.|.....|..| +++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~   25 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKI   25 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTT
T ss_pred             CCcCCcccCcccCChHHHHHHHHHH
Confidence            589999999999999999999 554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.93  E-value=6.6e-06  Score=35.06  Aligned_cols=25  Identities=20%  Similarity=0.307  Sum_probs=22.7

Q ss_pred             CCccccC--cCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRK--KCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~--~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|.  .|++.|.....|..|+++
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            4799998  599999999999999986

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.89  E-value=4.8e-06  Score=33.15  Aligned_cols=26  Identities=35%  Similarity=0.830  Sum_probs=22.6

Q ss_pred             CceEe---ecCcccCChhHHHHHHHHhcCC
Q 037234           28 RIWYC---VCGSDFKHKRSLKDHIKAFGHG   54 (81)
Q Consensus        28 ~p~~C---~C~~~f~~~~~l~~H~~~~~~~   54 (81)
                      +||.|   .|++.|...+.|..|+++| ++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H-~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIH-TG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGG-TC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHh-CC
Confidence            46788   7999999999999999998 53

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.80  E-value=4.1e-07  Score=45.49  Aligned_cols=45  Identities=20%  Similarity=0.239  Sum_probs=36.8

Q ss_pred             HHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           18 DWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        18 ~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      .|..|+++  +.+|+.| .|++.|. ...|..|+ .+ .+++||.|..+..
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~-c~~~~~~C~~C~~   51 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DY-CGARTELCGNCGR   51 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HH-HHHCEEECSSSCC
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hH-cCCCceEcccCCC
Confidence            34556653  5899999 9999995 88999999 78 8999999987654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.68  E-value=1.5e-05  Score=35.82  Aligned_cols=25  Identities=20%  Similarity=0.246  Sum_probs=22.7

Q ss_pred             CCccccC--cCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRK--KCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~--~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|.  .|++.|.....|..|+++
T Consensus        16 ~k~~~C~~~~C~k~F~~~~~L~~H~~~   42 (47)
T 1ncs_A           16 DKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            4799996  799999999999999986

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.62  E-value=0.00023  Score=34.42  Aligned_cols=44  Identities=20%  Similarity=0.228  Sum_probs=37.5

Q ss_pred             cCCcCCCChhHHHHHHH-h--cCC------ceEe---ecCcccCChhHHHHHHHHh
Q 037234            8 KCGKPFAVKGDWRTHEK-N--CGR------IWYC---VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         8 ~C~k~f~~~~~l~~h~~-~--~~~------p~~C---~C~~~f~~~~~l~~H~~~~   51 (81)
                      .|++.|.....|..|+. .  +.+      +|.|   .|++.+.....|..|+++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            49999999999999985 2  333      7999   7999999999999999875

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.16  E-value=7.3e-05  Score=40.87  Aligned_cols=35  Identities=20%  Similarity=0.388  Sum_probs=27.4

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhc-------CCCCCCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFG-------HGHAALGI   60 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~-------~~~~p~~~   60 (81)
                      |.+||.| .|++.|.+.+.|..|+++..       ..++||.-
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk~l~~~p~Tq   89 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQLSVEPYSQ   89 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTCHHHHHHHHHHTSCSSCT
T ss_pred             CCcceEcccCcchhCCHHHHHHHHhhhhhhHHHHHhccCCCcH
Confidence            6789999 99999999999999976431       24677744

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.79  E-value=0.0013  Score=29.98  Aligned_cols=22  Identities=23%  Similarity=0.333  Sum_probs=18.5

Q ss_pred             ccccCcCCcCCCChhHHHHHHH
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~   24 (81)
                      +|.|+.|+..|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            5778888888888888888887

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.78  E-value=0.00029  Score=38.48  Aligned_cols=25  Identities=16%  Similarity=0.188  Sum_probs=22.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..|++.|.....|..|+++
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CcceEcccCcchhCCHHHHHHHHhh
Confidence            3689999999999999999999984

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.37  E-value=0.003  Score=34.44  Aligned_cols=48  Identities=19%  Similarity=0.304  Sum_probs=38.6

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh-------------c----------------------CCceEe-ecCcccCChhHHH
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN-------------C----------------------GRIWYC-VCGSDFKHKRSLK   45 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~-------------~----------------------~~p~~C-~C~~~f~~~~~l~   45 (81)
                      +++.|..|...|.....+..|...             .                      ...|.| .|...|.+...+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            467899999999999888888730             0                      235679 9999999999999


Q ss_pred             HHHH
Q 037234           46 DHIK   49 (81)
Q Consensus        46 ~H~~   49 (81)
                      .|..
T Consensus       111 ~H~~  114 (127)
T 1zu1_A          111 SHYI  114 (127)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            8864

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.46  E-value=0.009  Score=33.73  Aligned_cols=53  Identities=17%  Similarity=0.177  Sum_probs=32.2

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHhcCCCCCC
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAAL   58 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~   58 (81)
                      +..|+.|+..+ ....|..|...  ..++..| .|+..+.. ..|..|..++ +|+.++
T Consensus       110 ~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~-~~~~~~  165 (170)
T 3hcs_A          110 LMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNC-PLALEH  165 (170)
T ss_dssp             EEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTC-CC----
T ss_pred             eeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhC-cChhhh
Confidence            44577777655 45567777753  3566778 88766543 4677888777 666554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.04  E-value=0.024  Score=25.77  Aligned_cols=28  Identities=18%  Similarity=0.375  Sum_probs=24.0

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      -+|.| .|+..|.....|+.|++.- .++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc-Cp~~   39 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC-CPEM   39 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH-CTTT
T ss_pred             CceeCCcccccccchHHHHhhhhhc-Ccch
Confidence            47889 9999999999999999976 5543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=94.24  E-value=0.029  Score=26.81  Aligned_cols=26  Identities=15%  Similarity=0.271  Sum_probs=21.1

Q ss_pred             eEe---ecCcccCChhHHHHHHH-HhcCCCC
Q 037234           30 WYC---VCGSDFKHKRSLKDHIK-AFGHGHA   56 (81)
Q Consensus        30 ~~C---~C~~~f~~~~~l~~H~~-~~~~~~~   56 (81)
                      +.|   .|++.|.+...|..|+. .| .+.+
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~H-v~~~   31 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDH-VSQD   31 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHS-CCCC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhc-cCcc
Confidence            456   59999999999999984 67 6665

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=93.62  E-value=0.12  Score=22.04  Aligned_cols=24  Identities=21%  Similarity=0.504  Sum_probs=19.4

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ..+.| .|.-+|.....+..|.+..
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             CcCeeccccceehhhHHHhhhheec
Confidence            46788 8888888888888888765

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=91.50  E-value=0.11  Score=26.63  Aligned_cols=27  Identities=33%  Similarity=0.687  Sum_probs=18.9

Q ss_pred             CCceEe-ecCcccCChhHHHHHHHHhcCCCCC
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIKAFGHGHAA   57 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p   57 (81)
                      ..-..| .||+.|..   |..|++++ +|-.|
T Consensus        19 ~d~iiClecGK~fK~---LkRHL~~~-hgltp   46 (87)
T 2jsp_A           19 DDHIVCLECGGSFKS---LKRHLTTH-HSMTP   46 (87)
T ss_dssp             SSCEECTBTCCEESB---HHHHHHHT-TCSCH
T ss_pred             CCceEecccchhhHH---HHHHHHHc-cCCCH
Confidence            345678 99998884   67899886 45443

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.44  E-value=0.19  Score=20.84  Aligned_cols=22  Identities=23%  Similarity=0.572  Sum_probs=18.8

Q ss_pred             eEe-ecCcccCChhHHHHHHHHh
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ..| .|.+.++.-.+|+.|++-.
T Consensus        10 qhcrfckkkysdvknlikhire~   32 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            468 9999999999999998854

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=90.39  E-value=0.08  Score=26.56  Aligned_cols=55  Identities=27%  Similarity=0.495  Sum_probs=37.4

Q ss_pred             CccccCcCCcCCCChhHHHHHHHhcC--CceEe-ecCcccCChhHHHHHHHHhcCCCCCCC
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKNCG--RIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALG   59 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~~~--~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~   59 (81)
                      -.|.|..||..+ .+..+..|.....  ..|.| .|++.|.. ..++.|...- +...-|.
T Consensus         9 V~F~C~~Cgd~l-KK~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~HtsCI-SEaeKY~   66 (79)
T 1wjv_A            9 VFFTCNACGESV-KKIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVKCI-SEGQKYG   66 (79)
T ss_dssp             CEEEESSSCCEE-ETTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCCCC-SCTTSSC
T ss_pred             eEEEcCCCCCee-ecccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEeeeC-Chhheee
Confidence            357899999654 4677999977643  46899 99999985 4566665444 3444453

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.24  E-value=0.24  Score=20.80  Aligned_cols=23  Identities=22%  Similarity=0.398  Sum_probs=19.3

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHh
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      .|.| .|.+.|.+...|..|-...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~   28 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAV   28 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhc
Confidence            5889 9999999999999986544

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=88.25  E-value=0.29  Score=28.79  Aligned_cols=25  Identities=28%  Similarity=0.494  Sum_probs=20.9

Q ss_pred             CCceEe-ecCcccCC-hhHHHHHHHHh
Q 037234           27 GRIWYC-VCGSDFKH-KRSLKDHIKAF   51 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~-~~~l~~H~~~~   51 (81)
                      ..|.+| .|+..|.+ ...|+.|+..+
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHH
Confidence            468899 99999987 88899998765

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=84.39  E-value=0.33  Score=22.56  Aligned_cols=20  Identities=35%  Similarity=0.786  Sum_probs=16.1

Q ss_pred             eEe-ecCcccCChhHHHHHHH
Q 037234           30 WYC-VCGSDFKHKRSLKDHIK   49 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~   49 (81)
                      -.| +|+..|..+..++.|+-
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            478 89999988888888753

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=83.19  E-value=1  Score=26.48  Aligned_cols=24  Identities=21%  Similarity=0.350  Sum_probs=20.8

Q ss_pred             CccccCcCCcCCCC-hhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAV-KGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~-~~~l~~h~~~   25 (81)
                      .|.+|..|+..|.. ...|+.|...
T Consensus       168 ~~L~C~~C~~~f~n~~~~LK~HL~~  192 (204)
T 3sp4_A          168 EDLKCWRCGETFGRHFTKLKAHLQE  192 (204)
T ss_dssp             SCCBCTTTCCBCTTCHHHHHHHHHH
T ss_pred             CCceeCCCCchhhcccHHHHHHHHH
Confidence            47899999999987 8899999873

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=82.44  E-value=1.1  Score=22.24  Aligned_cols=23  Identities=26%  Similarity=0.601  Sum_probs=17.9

Q ss_pred             ceEe-ecCcccC-------ChhHHHHHHHHh
Q 037234           29 IWYC-VCGSDFK-------HKRSLKDHIKAF   51 (81)
Q Consensus        29 p~~C-~C~~~f~-------~~~~l~~H~~~~   51 (81)
                      --.| .|++.+.       .-++|..|++..
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~   58 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSM   58 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHT
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHH
Confidence            3578 9998887       357899998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	81
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.75
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.51
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.32
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.31
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.3
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.26
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.26
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.22
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.22
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.2
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.19
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.19
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.13
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.09
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.06
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.06
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.06
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.05
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.01
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.99
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.97
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.95
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.91
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.9
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.87
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.85
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.83
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.83
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.79
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.72
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.68
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.67
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.67
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.66
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.58
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.54
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.49
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.45
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.36
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.35
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.32
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.31
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.3
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.23
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.1
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.07
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.04
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.96
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.88
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.83
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.82
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.75
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.71
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.71
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.69
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.65
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.56
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.55
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.52
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.51
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.51
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.5
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.49
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.44
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.4
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.36
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.36
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.33
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.32
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.32
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.3
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.28
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.26
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.21
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.19
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.09
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.06
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.96
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.92
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.78
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.71
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.5
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.3
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.23
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.21
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.18
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.06
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.99
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.04
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.68
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.55
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.2
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.84
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.8
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.38
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.28
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.0
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.19
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.11
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.73
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.2
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	89.59
d1fu9a_	36	U-shaped transcription factor, different fingers {	88.82
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	87.96
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	86.45
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	86.3
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	83.47
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.32

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=3.4e-19  Score=84.05  Aligned_cols=50  Identities=34%  Similarity=0.509  Sum_probs=47.4

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh--cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN--CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ||||.| .||+.|.....|..|+++  +++||.| .|+++|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            799999 599999999999999997  7999999 9999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=5.5e-15  Score=64.91  Aligned_cols=34  Identities=26%  Similarity=0.602  Sum_probs=31.3

Q ss_pred             CCceEe-ecCcccCChhHHHHHHH-HhcCCCCCCCCC
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIK-AFGHGHAALGIE   61 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~-~~~~~~~p~~~~   61 (81)
                      ++||.| .||++|...++|..|++ +| +|++||.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~H-t~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVH-TSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTS-CCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCcc-CCCcCcCCc
Confidence            689999 99999999999999986 68 999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=5.3e-13  Score=56.42  Aligned_cols=30  Identities=23%  Similarity=0.537  Sum_probs=27.5

Q ss_pred             hcCCceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           25 NCGRIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        25 ~~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      ++++||.| .|+++|.+.++|..|+++| +||
T Consensus         3 Tgekpy~C~~Cgk~F~~~~~L~~H~r~H-tgE   33 (33)
T d1x6ea1           3 SGEKPYGCVECGKAFSRSSILVQHQRVH-TGE   33 (33)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGG-GCS
T ss_pred             CCCCCeeCCCCCCEeCchHHhHhhcccc-CCC
Confidence            36899999 9999999999999999999 775

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.31  E-value=4.7e-13  Score=55.10  Aligned_cols=28  Identities=29%  Similarity=0.656  Sum_probs=23.8

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +||.| .|+++|...++|..|+++| +|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~H-TgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSH-TNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTT-TSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcc-cCCC
Confidence            58888 8888888888888888888 7875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=5.2e-13  Score=54.45  Aligned_cols=27  Identities=26%  Similarity=0.698  Sum_probs=21.4

Q ss_pred             CCceEe-ecCcccCChhHHHHHHHHhcCC
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIKAFGHG   54 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~~~~~~   54 (81)
                      ++||+| .|+++|...++|..|+++| +|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~H-TG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTH-TG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHH-HC
T ss_pred             CcCccCCCCcCEecccccccccCCCc-cC
Confidence            478888 8888888888888888887 54

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=9.5e-13  Score=54.12  Aligned_cols=28  Identities=25%  Similarity=0.562  Sum_probs=22.6

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +||.| .|+++|.+.++|..|+++| +|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~H-tgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTH-QNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGG-GCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCcc-CCcC
Confidence            57888 8888888888888888888 7765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.6e-13  Score=60.02  Aligned_cols=29  Identities=31%  Similarity=0.692  Sum_probs=27.1

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +++||.| .||++|.+.++|..|+++| +||
T Consensus         9 ~ekpy~C~~CgK~F~~~s~L~~H~r~H-tGE   38 (38)
T d2cota2           9 ERRRYKCDECGKSFSHSSDLSKHRRTH-TGE   38 (38)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTT-CCS
T ss_pred             CCCCEecCCCCceeeCHHHHHHhCccC-CCC
Confidence            6899999 9999999999999999999 886

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=4.1e-12  Score=59.15  Aligned_cols=38  Identities=24%  Similarity=0.564  Sum_probs=35.2

Q ss_pred             CCceEeecCcccCChhHHHHHHHHhcCCCCCCCCCCccC
Q 037234           27 GRIWYCVCGSDFKHKRSLKDHIKAFGHGHAALGIECFEE   65 (81)
Q Consensus        27 ~~p~~C~C~~~f~~~~~l~~H~~~~~~~~~p~~~~~~~~   65 (81)
                      ++||.|.||+.|....+|..|+++| +|++||.|..++.
T Consensus         1 EK~y~C~Cgk~F~~~~~l~~H~~~H-t~ekpy~C~~C~k   38 (53)
T d2csha1           1 DKLYPCQCGKSFTHKSQRDRHMSMH-LGLRPYGCGVCGK   38 (53)
T ss_dssp             CCCEECTTSCEESSHHHHHHHHHHH-SCCCSEECTTTSC
T ss_pred             CcCCCCCCCCeECCHHHhHHHhhcc-ccccCCcCCCcCC
Confidence            5899999999999999999999999 9999999987764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=4e-12  Score=54.69  Aligned_cols=31  Identities=32%  Similarity=0.650  Sum_probs=28.8

Q ss_pred             eEe-e--cCcccCChhHHHHHHHHhcCCCCCCCCC
Q 037234           30 WYC-V--CGSDFKHKRSLKDHIKAFGHGHAALGIE   61 (81)
Q Consensus        30 ~~C-~--C~~~f~~~~~l~~H~~~~~~~~~p~~~~   61 (81)
                      |.| .  |++.|....+|+.|+++| +|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~H-tgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLH-SDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHH-HTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCee-CCCCCEeCC
Confidence            678 4  999999999999999999 999999996

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3e-12  Score=56.00  Aligned_cols=32  Identities=25%  Similarity=0.300  Sum_probs=29.4

Q ss_pred             CCccccCcCCcCCCChhHHHHHHH-h--cCCceEe
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEK-N--CGRIWYC   32 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~-~--~~~p~~C   32 (81)
                      +|||.|..||+.|....+|..|++ +  +++||.|
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            589999999999999999999986 4  6899988

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=6.7e-12  Score=53.61  Aligned_cols=30  Identities=27%  Similarity=0.507  Sum_probs=26.4

Q ss_pred             hcCCceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           25 NCGRIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        25 ~~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +|++||+| .|++.|.+.++|..|+++| +..
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~H-t~~   33 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVH-TDT   33 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGG-TSC
T ss_pred             CCCccccCCCCCCcccChHHHHHHcccc-CCc
Confidence            36899999 9999999999999999998 554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=6.2e-12  Score=50.13  Aligned_cols=24  Identities=25%  Similarity=0.679  Sum_probs=19.0

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +||+| .||++|.+.++|..|+|+|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            57788 8888888888888888877

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.4e-11  Score=52.25  Aligned_cols=30  Identities=27%  Similarity=0.618  Sum_probs=26.6

Q ss_pred             hcCCceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           25 NCGRIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        25 ~~~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +|++||.| .|+++|.+.++|..|+++| +++
T Consensus         4 TgekPy~C~~C~k~F~~~~~L~~H~r~H-~~~   34 (36)
T d1x6ha2           4 TGEKPYACSHCDKTFRQKQLLDMHFKRY-HDP   34 (36)
T ss_dssp             CCCCCEECSSSSCEESSHHHHHHHHHHT-TCS
T ss_pred             CCCCCEECCCCCCCcCCHhHHHHhCccc-CCC
Confidence            37899999 9999999999999999999 554

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.8e-11  Score=49.91  Aligned_cols=27  Identities=22%  Similarity=0.634  Sum_probs=22.4

Q ss_pred             CceEe-e--cCcccCChhHHHHHHHHhcCCC
Q 037234           28 RIWYC-V--CGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        28 ~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +||.| .  |+++|.+.++|..|+++| +||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~H-tGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSH-TGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHT-TTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcC-cCC
Confidence            57888 6  888888888888888888 775

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=4.1e-11  Score=49.45  Aligned_cols=27  Identities=26%  Similarity=0.731  Sum_probs=23.5

Q ss_pred             CceEe-e--cCcccCChhHHHHHHHHhcCCC
Q 037234           28 RIWYC-V--CGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        28 ~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +||.| .  |+++|...++|..|+|+| +||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~H-TGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIH-TGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHH-HCC
T ss_pred             CCccCCCCCCCceECcHHHcCcccccc-CCC
Confidence            58899 5  999999999999999998 775

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=1.1e-11  Score=53.62  Aligned_cols=26  Identities=23%  Similarity=0.373  Sum_probs=23.9

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +++||.| .|+++|.+.++|..|+++|
T Consensus         8 geKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           8 GIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            7899999 9999999999999999988

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=3.4e-11  Score=48.92  Aligned_cols=25  Identities=16%  Similarity=0.255  Sum_probs=24.1

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ||||.|..|++.|...++|..|+++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~   25 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRT   25 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCC
Confidence            7999999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=4.1e-11  Score=47.69  Aligned_cols=25  Identities=24%  Similarity=0.397  Sum_probs=23.4

Q ss_pred             CccccCcCCcCCCChhHHHHHHHhc
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      |||+|.+|||+|...+.|..|++++
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            7999999999999999999999863

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=6e-11  Score=49.30  Aligned_cols=28  Identities=29%  Similarity=0.716  Sum_probs=22.7

Q ss_pred             CceEe---ecCcccCChhHHHHHHHHhcCCCC
Q 037234           28 RIWYC---VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        28 ~p~~C---~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +||.|   .|+++|...++|..|+++| +|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~H-tgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTH-TGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTT-SCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcc-cccC
Confidence            57888   4888888888888888888 7775

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.99  E-value=9.9e-11  Score=53.03  Aligned_cols=37  Identities=19%  Similarity=0.404  Sum_probs=31.7

Q ss_pred             HHHHHH-hcCCceEe-e--cCcccCChhHHHHHHHHhcCCCC
Q 037234           19 WRTHEK-NCGRIWYC-V--CGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        19 l~~h~~-~~~~p~~C-~--C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +..|+. ++++||.| .  |+++|...++|..|+++| +|+|
T Consensus         7 l~~h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~H-tgek   47 (47)
T d1ncsa_           7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH-LEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHH-TTTC
T ss_pred             hcchhhccCCCCeECCcCCCCccccCchHHHhhcccc-cCCC
Confidence            444554 37999999 7  999999999999999999 8886

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.97  E-value=2.6e-10  Score=46.61  Aligned_cols=24  Identities=21%  Similarity=0.324  Sum_probs=23.2

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      |||.|+.|++.|...+.|.+|+++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~   24 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRS   24 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHT
T ss_pred             CcCCCCCCCCCCCCchHcccccCc
Confidence            699999999999999999999997

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3.3e-10  Score=46.27  Aligned_cols=25  Identities=20%  Similarity=0.205  Sum_probs=23.6

Q ss_pred             CccccCcCCcCCCChhHHHHHHHhc
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      |||.|..|++.|.+.+.|..|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~H   25 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTH   25 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCcc
Confidence            7999999999999999999999973

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=4e-10  Score=48.26  Aligned_cols=27  Identities=22%  Similarity=0.512  Sum_probs=23.9

Q ss_pred             hcCCceEe-ecCcccCChhHHHHHHHHh
Q 037234           25 NCGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        25 ~~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +|++||.| .|++.|...++|..|++.+
T Consensus         4 TgekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           4 SGEKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             SCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CCCCCEeCCCCcccccchHHHHHHcccc
Confidence            37899999 9999999999999998665

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.91  E-value=2.8e-10  Score=48.41  Aligned_cols=26  Identities=19%  Similarity=0.163  Sum_probs=24.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      +|||.|..|++.|.++.+|..|++++
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CccccCCCCCCcccChHHHHHHcccc
Confidence            68999999999999999999999975

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.6e-10  Score=47.48  Aligned_cols=26  Identities=19%  Similarity=0.248  Sum_probs=24.4

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      +|||.|..||++|.+.+.|..|++++
T Consensus         5 ekpy~C~~Cgk~F~~~~~L~~H~r~H   30 (33)
T d1x6ea1           5 EKPYGCVECGKAFSRSSILVQHQRVH   30 (33)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHGG
T ss_pred             CCCeeCCCCCCEeCchHHhHhhcccc
Confidence            68999999999999999999999973

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=6.8e-10  Score=48.10  Aligned_cols=25  Identities=28%  Similarity=0.511  Sum_probs=23.9

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      +|||.|..||+.|...++|..|+++
T Consensus        10 ekpy~C~~CgK~F~~~s~L~~H~r~   34 (38)
T d2cota2          10 RRRYKCDECGKSFSHSSDLSKHRRT   34 (38)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTT
T ss_pred             CCCEecCCCCceeeCHHHHHHhCcc
Confidence            5899999999999999999999986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=4.8e-10  Score=45.72  Aligned_cols=26  Identities=35%  Similarity=0.764  Sum_probs=21.8

Q ss_pred             CceEe-e--cCcccCChhHHHHHHHHhcCC
Q 037234           28 RIWYC-V--CGSDFKHKRSLKDHIKAFGHG   54 (81)
Q Consensus        28 ~p~~C-~--C~~~f~~~~~l~~H~~~~~~~   54 (81)
                      +||.| .  |+++|.+.++|..|+++| +|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~H-tG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIH-TG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHH-HT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCcc-CC
Confidence            58888 5  889999999999998888 55

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=1.3e-09  Score=46.96  Aligned_cols=26  Identities=15%  Similarity=0.317  Sum_probs=24.4

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      ||||.|..|++.|..+.+|..|++++
T Consensus         9 eKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           9 IKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             SSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             ccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            68999999999999999999999864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.2e-09  Score=46.80  Aligned_cols=26  Identities=23%  Similarity=0.181  Sum_probs=24.5

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      ||||.|..|++.|...+.|..|++++
T Consensus         6 ekPy~C~~C~k~F~~~~~L~~H~r~H   31 (36)
T d1x6ha2           6 EKPYACSHCDKTFRQKQLLDMHFKRY   31 (36)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CCCEECCCCCCCcCCHhHHHHhCccc
Confidence            68999999999999999999999974

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.79  E-value=1.5e-09  Score=45.14  Aligned_cols=25  Identities=28%  Similarity=0.571  Sum_probs=16.0

Q ss_pred             CCceEe-e--cCcccCChhHHHHHHHHh
Q 037234           27 GRIWYC-V--CGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        27 ~~p~~C-~--C~~~f~~~~~l~~H~~~~   51 (81)
                      ++||.| .  |+++|...++|..|+++|
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            356666 4  666666666666666666

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=1.8e-09  Score=43.60  Aligned_cols=24  Identities=33%  Similarity=0.749  Sum_probs=16.6

Q ss_pred             CceEe-e--cCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-V--CGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~--C~~~f~~~~~l~~H~~~~   51 (81)
                      +||.| .  |+++|...++|..|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            46667 3  777777777777777766

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3.7e-09  Score=45.12  Aligned_cols=30  Identities=33%  Similarity=0.517  Sum_probs=26.9

Q ss_pred             ccccCc--CCcCCCChhHHHHHHHh--cCCceEe
Q 037234            3 SSKRKK--CGKPFAVKGDWRTHEKN--CGRIWYC   32 (81)
Q Consensus         3 p~~C~~--C~k~f~~~~~l~~h~~~--~~~p~~C   32 (81)
                      .|.|..  |++.|.....|++|+++  +++||.|
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            367876  99999999999999996  7999987

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=4.3e-09  Score=44.93  Aligned_cols=25  Identities=16%  Similarity=0.186  Sum_probs=23.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ||||.|..|++.|....+|..|++.
T Consensus         6 ekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           6 EKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCCEeCCCCcccccchHHHHHHccc
Confidence            6899999999999999999999863

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.67  E-value=1e-08  Score=42.57  Aligned_cols=26  Identities=23%  Similarity=0.298  Sum_probs=24.4

Q ss_pred             CCccccCc--CCcCCCChhHHHHHHHhc
Q 037234            1 MISSKRKK--CGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         1 ~kp~~C~~--C~k~f~~~~~l~~h~~~~   26 (81)
                      |+||.|..  |++.|....+|.+|++++
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            68999988  999999999999999975

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=1.2e-08  Score=41.81  Aligned_cols=25  Identities=20%  Similarity=0.315  Sum_probs=23.3

Q ss_pred             CccccCc--CCcCCCChhHHHHHHHhc
Q 037234            2 ISSKRKK--CGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         2 kp~~C~~--C~k~f~~~~~l~~h~~~~   26 (81)
                      |||.|..  |++.|...++|..|++++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~H   27 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSH   27 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcC
Confidence            6999998  999999999999999963

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.5e-08  Score=41.51  Aligned_cols=24  Identities=29%  Similarity=0.416  Sum_probs=22.6

Q ss_pred             CccccCc--CCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKK--CGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~--C~k~f~~~~~l~~h~~~   25 (81)
                      |||.|..  |++.|...++|..|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~   26 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRI   26 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccc
Confidence            6999987  99999999999999996

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.6e-08  Score=40.67  Aligned_cols=25  Identities=20%  Similarity=0.212  Sum_probs=22.9

Q ss_pred             CccccCc--CCcCCCChhHHHHHHHhc
Q 037234            2 ISSKRKK--CGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         2 kp~~C~~--C~k~f~~~~~l~~h~~~~   26 (81)
                      |||.|..  |++.|....+|.+|++++
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            6999988  999999999999999863

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=5.4e-08  Score=40.05  Aligned_cols=25  Identities=20%  Similarity=0.377  Sum_probs=22.6

Q ss_pred             CccccC--cCCcCCCChhHHHHHHHhc
Q 037234            2 ISSKRK--KCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         2 kp~~C~--~C~k~f~~~~~l~~h~~~~   26 (81)
                      |||.|+  .|++.|...++|..|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~H   27 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcc
Confidence            699996  5999999999999999973

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=2.3e-08  Score=38.12  Aligned_cols=22  Identities=41%  Similarity=0.856  Sum_probs=12.3

Q ss_pred             eEe-ecCcccCChhHHHHHHHHh
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      .+| .|++.|+.+..|..|+|.|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGC
T ss_pred             CccchhhhHhcchhHHHHHhhcc
Confidence            345 5555555555555555555

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=1.2e-07  Score=37.12  Aligned_cols=24  Identities=29%  Similarity=0.696  Sum_probs=14.6

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +||.| .||+.|........|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            56666 6666666666666665555

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=7.6e-08  Score=38.96  Aligned_cols=24  Identities=17%  Similarity=0.253  Sum_probs=22.4

Q ss_pred             CccccCc--CCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKK--CGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~--C~k~f~~~~~l~~h~~~   25 (81)
                      |||.|..  |++.|....+|..|+++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~   26 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRI   26 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCc
Confidence            6999987  99999999999999985

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.32  E-value=9.3e-08  Score=42.94  Aligned_cols=25  Identities=20%  Similarity=0.216  Sum_probs=23.4

Q ss_pred             CCccccCc--CCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKK--CGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~--C~k~f~~~~~l~~h~~~   25 (81)
                      ++||.|..  |++.|...++|..|+++
T Consensus        16 ekpy~C~~~~C~k~F~~~~~L~~H~r~   42 (47)
T d1ncsa_          16 DKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             CCCeECCcCCCCccccCchHHHhhccc
Confidence            58999987  99999999999999996

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.31  E-value=2.2e-07  Score=36.39  Aligned_cols=26  Identities=23%  Similarity=0.331  Sum_probs=24.0

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      ||||.|..||+.|.......+|.+++
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            68999999999999999999998864

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2.1e-07  Score=37.78  Aligned_cols=31  Identities=23%  Similarity=0.493  Sum_probs=26.0

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHhcCCCCCCC
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAFGHGHAALG   59 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~~~~~~p~~   59 (81)
                      +...| .||+.|..-..|..|.-.| ++++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklsh-s~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSH-SGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGS-CSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhccc-CCCCCCC
Confidence            45678 9999999999999998888 8999983

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=3.3e-07  Score=35.66  Aligned_cols=27  Identities=22%  Similarity=0.572  Sum_probs=22.8

Q ss_pred             CCceEe-ecCcccCChhHHHHHHHHhcCC
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIKAFGHG   54 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~~~~~~   54 (81)
                      ++||+| .|...-.+.+.|..|+|.| +|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~h-tg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSH-TG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTC-CS
T ss_pred             CCcceeeecccccCCchheEEeeecc-cC
Confidence            478999 8988888888899999888 66

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=9.9e-07  Score=33.48  Aligned_cols=23  Identities=35%  Similarity=0.554  Sum_probs=21.6

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      |++|..|++.|..+..|+.|++.
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~   23 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRC   23 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGG
T ss_pred             CCccchhhhHhcchhHHHHHhhc
Confidence            78999999999999999999985

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1e-06  Score=34.09  Aligned_cols=25  Identities=32%  Similarity=0.626  Sum_probs=15.2

Q ss_pred             eEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      ..| .||++|...+.|++|+-+| +|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvh-tge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVH-TGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGT-SCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcc-cCC
Confidence            356 6666666666666666665 543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=2.1e-06  Score=33.97  Aligned_cols=24  Identities=25%  Similarity=0.677  Sum_probs=19.1

Q ss_pred             CceEe---ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC---VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C---~C~~~f~~~~~l~~H~~~~   51 (81)
                      +||.|   .|++++...++|..|++.+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            57888   4888888888888888865

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=3.9e-06  Score=33.24  Aligned_cols=27  Identities=33%  Similarity=0.808  Sum_probs=21.1

Q ss_pred             CCceEe-ecCcccCChhHHHHHHHHhcCC
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIKAFGHG   54 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~~~~~~   54 (81)
                      ++||.| .|...|..+..+..|.|.| .|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrsh-dg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSH-DG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHH-SC
T ss_pred             CCCcccchHHHHhhccccceEeeecc-cC
Confidence            467888 8888888888888888877 54

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=5.6e-06  Score=32.21  Aligned_cols=26  Identities=31%  Similarity=0.595  Sum_probs=20.2

Q ss_pred             eEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      |.| .|+......+-|+.|+|.| ++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsH-T~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTH-TDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHT-SSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHh-cCCC
Confidence            567 7888888888888888888 6654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=8.2e-06  Score=31.37  Aligned_cols=24  Identities=21%  Similarity=0.538  Sum_probs=18.6

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +|++| .|...-...++|..|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            57777 7777777777888888877

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.82  E-value=2.7e-06  Score=31.94  Aligned_cols=22  Identities=27%  Similarity=0.708  Sum_probs=13.1

Q ss_pred             eEe-ecCcccCChhHHHHHHHHh
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |+| .|.++|..++.|..|+|+|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            345 5666666666666666555

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.75  E-value=1.4e-05  Score=31.00  Aligned_cols=24  Identities=29%  Similarity=0.470  Sum_probs=19.8

Q ss_pred             CceEe---ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC---VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C---~C~~~f~~~~~l~~H~~~~   51 (81)
                      .||+|   .|++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            47888   6888888888888888876

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.2e-05  Score=34.16  Aligned_cols=24  Identities=21%  Similarity=0.588  Sum_probs=21.0

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHH
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIK   49 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~   49 (81)
                      |-+||.| .|++.|.++.++..|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            5689999 99999999999988864

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.71  E-value=1.7e-05  Score=29.70  Aligned_cols=23  Identities=22%  Similarity=0.349  Sum_probs=21.2

Q ss_pred             cccCcCCcCCCChhHHHHHHHhc
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      |+|..|.++|..++.|.+|++.+
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            78999999999999999999864

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=7.8e-06  Score=33.04  Aligned_cols=29  Identities=17%  Similarity=0.201  Sum_probs=25.1

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh--cCCce
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN--CGRIW   30 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~--~~~p~   30 (81)
                      +...|..||+.|.....|.+|.-+  +++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            456799999999999999999875  68887

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.3e-05  Score=31.14  Aligned_cols=22  Identities=27%  Similarity=0.439  Sum_probs=12.9

Q ss_pred             ccccCcCCcCCCChhHHHHHHH
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~   24 (81)
                      ||.|..|+-+|..+.+|..||.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            4556666655666666665555

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=3.7e-05  Score=30.01  Aligned_cols=23  Identities=30%  Similarity=0.515  Sum_probs=12.0

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHh
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ||.| .|...-...++|+.|+++-
T Consensus         2 py~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhcc
Confidence            4555 5555555555555555544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=1.5e-05  Score=30.71  Aligned_cols=23  Identities=22%  Similarity=0.417  Sum_probs=20.7

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      -+.|..||++|...+.|++|+-+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lv   24 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLV   24 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGG
T ss_pred             cchHHHHhHHHHHHHHHHHHhhc
Confidence            47899999999999999999864

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.52  E-value=4.3e-05  Score=28.95  Aligned_cols=25  Identities=32%  Similarity=0.530  Sum_probs=20.4

Q ss_pred             Ee-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           31 YC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        31 ~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      +| .|.+.|.++.-|+.|-|.| +|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~h-tgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKH-TGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHH-SSCC
T ss_pred             cCcchHHHHHHhHhhhhccccc-cCCC
Confidence            57 7888888888888888888 7775

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=3.9e-05  Score=29.86  Aligned_cols=24  Identities=38%  Similarity=0.736  Sum_probs=16.7

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +||+| .|..--.+.++|..|++..
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHH
Confidence            46777 7776667777777776655

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.51  E-value=2.7e-05  Score=30.94  Aligned_cols=23  Identities=22%  Similarity=0.580  Sum_probs=18.5

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHh
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ||.| .|++.|..+.-|..|++..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKl   24 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKI   24 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTT
T ss_pred             CcccccccchhhHHHHHHHHHHHH
Confidence            6888 8888888888888886644

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=3.6e-05  Score=29.52  Aligned_cols=26  Identities=19%  Similarity=0.153  Sum_probs=23.7

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHhc
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      .|||+|..|...-...++|..|++++
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCCcccccccchhcchhhHhhhhhcc
Confidence            37999999999999999999999974

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=5e-05  Score=29.47  Aligned_cols=23  Identities=35%  Similarity=0.673  Sum_probs=21.2

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHh
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ||.| .|..+|..+.+|..|++.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            7999 9999999999999999854

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=4.7e-05  Score=30.01  Aligned_cols=25  Identities=20%  Similarity=0.232  Sum_probs=23.3

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ||||.|+.|...|..+.-+.-|.++
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCcccchHHHHhhccccceEeeec
Confidence            6899999999999999999999886

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.40  E-value=7.8e-05  Score=31.22  Aligned_cols=24  Identities=25%  Similarity=0.744  Sum_probs=19.9

Q ss_pred             CceEe-ecCcccCChhHHHHHHHHh
Q 037234           28 RIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        28 ~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +.|.| .|++.|.+...|--|++.|
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTT
T ss_pred             CccCCCCCCCccCCcccccchHhhh
Confidence            56788 8888888888888888877

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=4.8e-05  Score=28.40  Aligned_cols=21  Identities=29%  Similarity=0.490  Sum_probs=11.9

Q ss_pred             ccccCcCCcCCCChhHHHHHH
Q 037234            3 SSKRKKCGKPFAVKGDWRTHE   23 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~   23 (81)
                      ||+|..|...|.++..|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            555555555555555555554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=5.8e-05  Score=29.66  Aligned_cols=24  Identities=25%  Similarity=0.297  Sum_probs=21.9

Q ss_pred             CccccCc--CCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKK--CGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~--C~k~f~~~~~l~~h~~~   25 (81)
                      |||.|..  |++.+...++|..|+++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~   26 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHh
Confidence            6899986  99999999999999985

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.33  E-value=0.00012  Score=27.96  Aligned_cols=22  Identities=32%  Similarity=0.440  Sum_probs=13.4

Q ss_pred             ccccCcCCcCCCChhHHHHHHH
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~   24 (81)
                      ||.|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4566666666666666666543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=5.3e-05  Score=32.14  Aligned_cols=24  Identities=17%  Similarity=0.342  Sum_probs=22.3

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      |||.|..|+|.|....++.+|...
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhhhh
Confidence            799999999999999999999874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=4.1e-05  Score=30.42  Aligned_cols=24  Identities=17%  Similarity=0.519  Sum_probs=17.2

Q ss_pred             CceEe---ecCcccCChhHHHHHH-HHh
Q 037234           28 RIWYC---VCGSDFKHKRSLKDHI-KAF   51 (81)
Q Consensus        28 ~p~~C---~C~~~f~~~~~l~~H~-~~~   51 (81)
                      +||.|   .|.++|++.+.-..|+ |+|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            47777   4777777777777776 666

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.30  E-value=8.9e-05  Score=28.79  Aligned_cols=27  Identities=22%  Similarity=0.470  Sum_probs=20.8

Q ss_pred             CceEe---ecCcccCChhHHHHHHHHhcCCC
Q 037234           28 RIWYC---VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        28 ~p~~C---~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +||.|   .|.+.|.....|.+|.-+| +|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~th-tge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTH-TGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHH-HTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccc-cCC
Confidence            47777   5888888888888887777 664

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.28  E-value=9.7e-05  Score=27.54  Aligned_cols=22  Identities=27%  Similarity=0.729  Sum_probs=20.0

Q ss_pred             ceEe-ecCcccCChhHHHHHHHH
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKA   50 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~   50 (81)
                      ||+| .|...|..+..|+.|+-.
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            8999 999999999999999753

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=0.00022  Score=27.57  Aligned_cols=28  Identities=25%  Similarity=0.712  Sum_probs=24.3

Q ss_pred             CCceEe-ecCcccCChhHHHHHHHHhcCCC
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +..|.| .|-..|..+..|..|+-.| +|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsh-tge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSH-TGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHH-SSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecc-cCC
Confidence            457899 9999999999999999988 775

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=8.8e-05  Score=28.30  Aligned_cols=21  Identities=29%  Similarity=0.596  Sum_probs=19.1

Q ss_pred             ceEe-ecCcccCChhHHHHHHH
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIK   49 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~   49 (81)
                      ||+| .||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7899 99999999999999864

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00022  Score=27.74  Aligned_cols=24  Identities=21%  Similarity=0.191  Sum_probs=22.3

Q ss_pred             CccccCcCCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      |||.|..|...-...++|+.|.++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            699999999999999999999986

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00017  Score=27.96  Aligned_cols=23  Identities=17%  Similarity=0.105  Sum_probs=21.3

Q ss_pred             CccccCcCCcCCCChhHHHHHHH
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~   24 (81)
                      +||+|..|.-...+.++|..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHH
Confidence            58999999999999999999987

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00016  Score=27.81  Aligned_cols=25  Identities=12%  Similarity=0.048  Sum_probs=22.5

Q ss_pred             CCccccCcCCcCCCChhHHHHHHHh
Q 037234            1 MISSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         1 ~kp~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      ++||+|..|...-...+.|..|.+.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~   25 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRS   25 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTT
T ss_pred             CCcceeeecccccCCchheEEeeec
Confidence            6899999999988899999999885

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00038  Score=28.96  Aligned_cols=25  Identities=24%  Similarity=0.583  Sum_probs=21.1

Q ss_pred             CCceEe---ecCcccCChhHHHHHHHHh
Q 037234           27 GRIWYC---VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        27 ~~p~~C---~C~~~f~~~~~l~~H~~~~   51 (81)
                      ++||.|   .|+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            678888   6888899998888888776

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.92  E-value=0.00028  Score=27.21  Aligned_cols=24  Identities=25%  Similarity=0.501  Sum_probs=21.1

Q ss_pred             CccccCc--CCcCCCChhHHHHHHHh
Q 037234            2 ISSKRKK--CGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         2 kp~~C~~--C~k~f~~~~~l~~h~~~   25 (81)
                      .||+|+.  |++.|...+-|++|.++
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhc
Confidence            5899985  99999999999999874

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.78  E-value=0.00033  Score=27.71  Aligned_cols=22  Identities=14%  Similarity=0.244  Sum_probs=20.6

Q ss_pred             ccccCcCCcCCCChhHHHHHHH
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~   24 (81)
                      ||.|..|++.|.....|.+|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            7999999999999999999986

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.71  E-value=0.00058  Score=28.46  Aligned_cols=25  Identities=16%  Similarity=0.101  Sum_probs=22.8

Q ss_pred             CccccCcCCcCCCChhHHHHHHHhc
Q 037234            2 ISSKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         2 kp~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      +.|.|..|++.|...-.|--|++.+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTT
T ss_pred             CccCCCCCCCccCCcccccchHhhh
Confidence            5699999999999999999999875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0017  Score=24.98  Aligned_cols=23  Identities=13%  Similarity=0.161  Sum_probs=21.1

Q ss_pred             cccCcCCcCCCChhHHHHHHHhc
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKNC   26 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~~   26 (81)
                      |.|..||....-.+.|+.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsH   24 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTH   24 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             ccccccCcccCCHHHHHHHHHHh
Confidence            88999999999999999999963

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0019  Score=26.03  Aligned_cols=23  Identities=22%  Similarity=0.704  Sum_probs=18.4

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHh
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      .|.| .|++.|..+..+.+|....
T Consensus         4 afvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeeecccccchhcchHHHHHhhhc
Confidence            4788 8888888888888887765

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0011  Score=26.82  Aligned_cols=23  Identities=30%  Similarity=0.527  Sum_probs=20.6

Q ss_pred             ccccCcCCcCCCChhHHHHHHHh
Q 037234            3 SSKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         3 p~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      .|.|..|||.|.....+.+|-..
T Consensus         4 afvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhhh
Confidence            57899999999999999999875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.001  Score=26.97  Aligned_cols=20  Identities=25%  Similarity=0.318  Sum_probs=16.5

Q ss_pred             CcccCChhHHHHHHHHhcCCC
Q 037234           35 GSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        35 ~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      ++.|..+..|+.|+|.| +||
T Consensus        14 ~~pf~a~YkLv~H~R~H-TgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRH-TGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHH-HCC
T ss_pred             CCcchhHHHHHHHHhhc-CCC
Confidence            35588899999999999 775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.0019  Score=24.57  Aligned_cols=23  Identities=22%  Similarity=0.319  Sum_probs=17.3

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHh
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |.+| .|..+.+++..|+.|.|+|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            5677 7777777777888887777

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0017  Score=28.34  Aligned_cols=25  Identities=32%  Similarity=0.677  Sum_probs=22.3

Q ss_pred             ceEe-ecCcccCChhHHHHHHHHhcC
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIKAFGH   53 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~~~~~   53 (81)
                      .|.| .|++.|.....|+.|...|+.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            5789 999999999999999998854

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0023  Score=26.50  Aligned_cols=24  Identities=17%  Similarity=0.263  Sum_probs=21.3

Q ss_pred             CCcccc--CcCCcCCCChhHHHHHHH
Q 037234            1 MISSKR--KKCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         1 ~kp~~C--~~C~k~f~~~~~l~~h~~   24 (81)
                      +|||.|  +.|+..|.....|..|..
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~   29 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKH   29 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhh
Confidence            589999  569999999999999876

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.04  E-value=0.011  Score=22.14  Aligned_cols=22  Identities=36%  Similarity=0.730  Sum_probs=17.8

Q ss_pred             eEe---ecCcccCChhHHHHHHHHh
Q 037234           30 WYC---VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C---~C~~~f~~~~~l~~H~~~~   51 (81)
                      |.|   .|+++|.....|+.|+-.|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            566   5888998888888888776

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.68  E-value=0.011  Score=21.80  Aligned_cols=21  Identities=29%  Similarity=0.290  Sum_probs=11.0

Q ss_pred             cccCcCCcCCCChhHHHHHHH
Q 037234            4 SKRKKCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~   24 (81)
                      |.|+.|-+-|..+.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            345555555555555555544

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.55  E-value=0.01  Score=22.51  Aligned_cols=19  Identities=16%  Similarity=0.560  Sum_probs=17.1

Q ss_pred             ecCcccCChhHHHHHHHHh
Q 037234           33 VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        33 ~C~~~f~~~~~l~~H~~~~   51 (81)
                      .|.+.|...+.+..|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            5889999999999999887

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.20  E-value=0.0063  Score=28.54  Aligned_cols=21  Identities=29%  Similarity=0.695  Sum_probs=17.8

Q ss_pred             ceEe-ecCcccCChhHHHHHHH
Q 037234           29 IWYC-VCGSDFKHKRSLKDHIK   49 (81)
Q Consensus        29 p~~C-~C~~~f~~~~~l~~H~~   49 (81)
                      -|.| .|++.|.+...|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            4789 99999999999988855

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.84  E-value=0.03  Score=21.05  Aligned_cols=22  Identities=23%  Similarity=0.520  Sum_probs=15.4

Q ss_pred             eEe-ecCcccCChhHHHHHHHHh
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      |+| .|+.....++.|..|++.-
T Consensus         3 ~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCcchhheeehhhhhHHhhhc
Confidence            567 7777777777777777654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.80  E-value=0.037  Score=21.43  Aligned_cols=27  Identities=22%  Similarity=0.708  Sum_probs=19.4

Q ss_pred             CceEe---ecCcccCChhHHHHHHHHhcCCC
Q 037234           28 RIWYC---VCGSDFKHKRSLKDHIKAFGHGH   55 (81)
Q Consensus        28 ~p~~C---~C~~~f~~~~~l~~H~~~~~~~~   55 (81)
                      +.|.|   .|+..|...-.|..|+-.| +|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckH-TGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKH-TGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHH-HCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhh-cCC
Confidence            45677   5777777777788887777 664

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.38  E-value=0.061  Score=23.15  Aligned_cols=26  Identities=19%  Similarity=0.457  Sum_probs=22.5

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      .+.|-.| .|+....+..+|..|+.+.
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            3678899 9999999999999998876

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.28  E-value=0.027  Score=22.58  Aligned_cols=26  Identities=19%  Similarity=0.428  Sum_probs=20.7

Q ss_pred             cCCceEe-ecCcccCChhHHHHHHHHh
Q 037234           26 CGRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        26 ~~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      +...|.| +|.+.+.+.+++-.|--+.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhh
Confidence            3567899 9999999999998885543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.00  E-value=0.049  Score=23.51  Aligned_cols=22  Identities=32%  Similarity=0.451  Sum_probs=20.1

Q ss_pred             cccCcCCcCCCChhHHHHHHHh
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      |.|..|+|.|....-|..|...
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQ   28 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQ   28 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHH
T ss_pred             eeccccccccCCHHHHhHhHHh
Confidence            6799999999999999999874

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.19  E-value=0.1  Score=19.81  Aligned_cols=23  Identities=30%  Similarity=0.686  Sum_probs=18.0

Q ss_pred             ceEe---ecCcccCChhHHHHHHHHh
Q 037234           29 IWYC---VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        29 p~~C---~C~~~f~~~~~l~~H~~~~   51 (81)
                      .|.|   .|...|..+.+++.|....
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrf   27 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRF   27 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHhhh
Confidence            4677   6888899999998886544

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.11  E-value=0.052  Score=21.45  Aligned_cols=21  Identities=19%  Similarity=0.346  Sum_probs=14.8

Q ss_pred             cccCcCCcCCCChhHHHHHHH
Q 037234            4 SKRKKCGKPFAVKGDWRTHEK   24 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~   24 (81)
                      |.|.-||-.|...+.|..|+.
T Consensus         9 f~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHTT
T ss_pred             eeccccceeecChhHHHhhhh
Confidence            557777777777777777653

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.73  E-value=0.12  Score=19.59  Aligned_cols=18  Identities=28%  Similarity=0.772  Sum_probs=8.8

Q ss_pred             eEe-ecCcccCChhHHHHH
Q 037234           30 WYC-VCGSDFKHKRSLKDH   47 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H   47 (81)
                      |.| .||+.+.+...++.|
T Consensus         3 ftc~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHH
T ss_pred             eechhHHHHHhhccCceEE
Confidence            344 455555555444444

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.20  E-value=0.029  Score=26.15  Aligned_cols=22  Identities=18%  Similarity=0.366  Sum_probs=20.0

Q ss_pred             cccCcCCcCCCChhHHHHHHHh
Q 037234            4 SKRKKCGKPFAVKGDWRTHEKN   25 (81)
Q Consensus         4 ~~C~~C~k~f~~~~~l~~h~~~   25 (81)
                      |-|..|++.|.....|..|.++
T Consensus        16 fYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             EecccccCccCCHHHHHHHHcc
Confidence            6799999999999999999874

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.59  E-value=0.023  Score=26.14  Aligned_cols=13  Identities=38%  Similarity=0.874  Sum_probs=6.7

Q ss_pred             ceEe-ecCcccCCh
Q 037234           29 IWYC-VCGSDFKHK   41 (81)
Q Consensus        29 p~~C-~C~~~f~~~   41 (81)
                      -|.| .|++.|+..
T Consensus        14 ~y~Cp~C~~~ys~L   27 (62)
T d1vd4a_          14 SFKCPVCSSTFTDL   27 (62)
T ss_dssp             EEECSSSCCEEEHH
T ss_pred             ceECCCCCCCcchh
Confidence            4555 555555444

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.82  E-value=0.27  Score=19.69  Aligned_cols=26  Identities=19%  Similarity=0.493  Sum_probs=19.8

Q ss_pred             eEe-ecCcccCChhHHHHHHHHhcCCCC
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAFGHGHA   56 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~~~~~~   56 (81)
                      ..| .|.-+|...+.++.|.+.. ...+
T Consensus         9 rYC~~CDI~Fn~~~T~~aHKk~Y-Css~   35 (36)
T d1fu9a_           9 KYCSTCDISFNYVKTYLAHKQFY-CKNK   35 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHHHT-SCCC
T ss_pred             hHHhhCCceehhHHHHHHHHHhc-ccCC
Confidence            468 8888999999999888765 4443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.96  E-value=0.34  Score=18.23  Aligned_cols=19  Identities=32%  Similarity=0.508  Sum_probs=14.0

Q ss_pred             ecCcccCChhHHHHHHHHh
Q 037234           33 VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        33 ~C~~~f~~~~~l~~H~~~~   51 (81)
                      .|++.|+++.-|.-|.+.-
T Consensus         7 gc~kifsnrqylnhh~kyq   25 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKKYQ   25 (30)
T ss_dssp             TTCCEESSHHHHHHHHHHG
T ss_pred             CchhhhccHHHHHhHHHHH
Confidence            5888888888777776543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.45  E-value=0.3  Score=22.38  Aligned_cols=25  Identities=20%  Similarity=0.562  Sum_probs=21.9

Q ss_pred             CCceEe-ecCcccCChhHHHHHHHHh
Q 037234           27 GRIWYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        27 ~~p~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ...|+| .|...|.....|..|+..|
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~h   41 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIH   41 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhc
Confidence            457999 9999999999999998877

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.30  E-value=0.73  Score=20.09  Aligned_cols=25  Identities=28%  Similarity=0.424  Sum_probs=21.4

Q ss_pred             CCceEe---ecCcccCChhHHHHHHHHh
Q 037234           27 GRIWYC---VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        27 ~~p~~C---~C~~~f~~~~~l~~H~~~~   51 (81)
                      -+||.|   .|..+|.-..+|+.|-+..
T Consensus        18 yrpyrcvhqgc~aaftiq~nlilhy~av   45 (61)
T d1x3ca1          18 YRPYRCVHQGCFAAFTIQQNLILHYQAV   45 (61)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHH
T ss_pred             CCceeeeccchhhhhhhhhhHHHHHHHH
Confidence            478999   6889999999999997765

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=83.47  E-value=0.26  Score=27.03  Aligned_cols=35  Identities=26%  Similarity=0.605  Sum_probs=26.1

Q ss_pred             hHHHHHHHh----cC-----CceEe-ecCcccCChhHHHHHHHHhc
Q 037234           17 GDWRTHEKN----CG-----RIWYC-VCGSDFKHKRSLKDHIKAFG   52 (81)
Q Consensus        17 ~~l~~h~~~----~~-----~p~~C-~C~~~f~~~~~l~~H~~~~~   52 (81)
                      .-|..|.+.    |.     .-|+| .|++ +....+|..|++.|+
T Consensus       125 grlieHiK~~m~~GqDyvFWQFYKCe~CgK-YvDie~~~~H~k~HG  169 (218)
T d2czra1         125 AALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHG  169 (218)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             HHHHHHHHhccccCcceEEEEEeehhhcCc-eecHHHHHHHHHHcC
Confidence            457888884    21     34689 9987 677789999999883

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.32  E-value=0.41  Score=19.16  Aligned_cols=22  Identities=27%  Similarity=0.386  Sum_probs=17.6

Q ss_pred             eEe-ecCcccCChhHHHHHHHHh
Q 037234           30 WYC-VCGSDFKHKRSLKDHIKAF   51 (81)
Q Consensus        30 ~~C-~C~~~f~~~~~l~~H~~~~   51 (81)
                      ..| .|.+.|...-++.+|+--.
T Consensus         4 ltclecmrtfkssfsiwrhqvev   26 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVEV   26 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHHHHHhhhee
Confidence            478 9999999988888886544